Hey Walter,<div>That option definitely helped, but the compiling process is still aborting.</div><div>Now I get the message:</div><div><br></div><div><div>/scinet/gpc/Libraries/petsc-3.2-p2-openmpi-centos6/linux-gnu-c-opt/lib/libpetsc.a(gs.o):gs.c:(.text+0x903): more undefined references to `</div>
<div>dcopy_&#39; follow</div><div>/scinet/gpc/Libraries/petsc-3.2-p2-openmpi-centos6/linux-gnu-c-opt/lib/libpetsc.a(gs.o): In function `gs_gop_vec_pairwise_plus&#39;:</div><div>gs.c:(.text+0x1456): undefined reference to `daxpy_&#39;</div>
<div>scons: *** [build/bin/Gale] Error 1</div><div>scons: building terminated because of errors.</div><div><br></div><div>Thanks for all your help.</div><div>Rob</div><br><div class="gmail_quote">On Wed, May 23, 2012 at 2:07 PM, Walter Landry <span dir="ltr">&lt;<a href="mailto:wlandry@caltech.edu" target="_blank">wlandry@caltech.edu</a>&gt;</span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div class="HOEnZb"><div class="h5">Robert Gray &lt;<a href="mailto:graywacke@gmail.com">graywacke@gmail.com</a>&gt; wrote:<br>

&gt; Hey Walter,<br>
&gt; That option got me through the configuration process.  However, when I try<br>
&gt; to compile it it fails with the message:<br>
&gt;<br>
&gt; compilation aborted for StGermain/Base/IO/src/IO_Handler.cxx (code 2)<br>
&gt; scons: *** [build/StGermain/Base/IO/src/IO_Handler.os] Error 2<br>
&gt; scons: building terminated because of errors.<br>
&gt;<br>
&gt; Early on after:<br>
&gt;<br>
&gt; scons: Building targets ...<br>
&gt;<br>
&gt; I get:<br>
&gt;<br>
&gt; mpicxx -o build/StGermain/Base/IO/src/IO_Handler.os -c -g -O -Wall -fPIC<br>
&gt; -DCURR_MODULE_NAME=&quot;\&quot;BaseIO\&quot;&quot; -DDEBUG -DHAVE_LIBXML2 -DHAVE_MPI<br>
&gt; -DHAVE_HDF5 -DHAVE_PETSC -DSYSTEM_SIZEOF_LONG=8 -DMODULE_EXT=&quot;\&quot;so\&quot;&quot;<br>
&gt; -DLIB_DIR=&quot;\&quot;/scratch/r/russ/rgray/GALE/build/lib\&quot;&quot; -DNOSHARED<br>
&gt; -DVERSION=&quot;\&quot;unknown\&quot;&quot; -DREAD_HDF5 -DWRITE_HDF5 -Ibuild/include/muparserx<br>
&gt; -Ibuild/include/json_parser -Ibuild/include/json_spirit<br>
&gt; -I/usr/include/libxml2<br>
&gt; -I/scinet/gpc/Libraries/HDF5-1.8.7/v18-serial-gcc/include<br>
&gt; -I/scinet/gpc/Libraries/petsc-3.2-p2-openmpi-centos6/include<br>
&gt; -I/scinet/gpc/Libraries/petsc-3.2-p2-openmpi-centos6/linux-gnu-c-opt/include<br>
&gt; -I/scinet/gpc/mpi/openmpi/1.4.3-intel-v12.0/include -Ibuild/include<br>
&gt; -Ibuild/include/StGermain StGermain/Base/IO/src/IO_Handler.cxx<br>
&gt; build/include/boost/type_traits/is_rvalue_reference.hpp(21): error:<br>
&gt; expected a &quot;&gt;&quot;<br>
&gt;   BOOST_TT_AUX_BOOL_TRAIT_PARTIAL_SPEC1_1(typename<br>
&gt; T,is_rvalue_reference,T&amp;&amp;,true)<br>
&gt;<br>
&gt; and more &quot;error: expected a &quot;&gt;&quot;&quot; messages before the compilation aborts.<br>
<br>
</div></div>Try adding<br>
<br>
  --cxxflags=&quot;-std=c++0x&quot;<br>
<br>
to the configure line.<br>
<br>
Cheers,<br>
Walter Landry<br>
</blockquote></div><br></div>