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<p class=MsoPlainText>Hello,<o:p></o:p></p>
<p class=MsoPlainText><o:p> </o:p></p>
<p class=MsoPlainText>I’m trying to run CitcomS on an Altix Ice
supercomputer. I’ve been working through the user manual but have a
problem. When I try to run example1.cfg, I get an error message.<o:p></o:p></p>
<p class=MsoPlainText><o:p> </o:p></p>
<p class=MsoPlainText>i.e. using the command:<o:p></o:p></p>
<p class=MsoPlainText>citcoms example1.cfg --solver.output.output_format=hdf5<o:p></o:p></p>
<p class=MsoPlainText><o:p> </o:p></p>
<p class=MsoPlainText>I get the error:<o:p></o:p></p>
<p class=MsoPlainText>MPI Error. The program attempted to construct a
derived datatype with depth 10, but the maximum allowed depth is 8. You
can increase the allowed depth via the MPI_TYPE_DEPTH environmet variable.<o:p></o:p></p>
<p class=MsoPlainText>MPI Error. The program attempted to construct a
derived datatype with depth 10, but the maximum allowed depth is 8. You
can increase the allowed depth via the MPI_TYPE_DEPTH environmet variable.<o:p></o:p></p>
<p class=MsoPlainText>MPI Error, rank:2, function:MPI_TYPE_STRUCT, Invalid
datatype argument MPI Error. The program attempted to construct a derived
datatype with depth 10, but the maximum allowed depth is 8. You can
increase the allowed depth via the MPI_TYPE_DEPTH environmet variable.<o:p></o:p></p>
<p class=MsoPlainText>MPI Error, rank:3, function:MPI_TYPE_STRUCT, Invalid
datatype argument MPI Error, rank:1, function:MPI_TYPE_STRUCT, Invalid datatype
argument MPI Error. The program attempted to construct a derived datatype
with depth 10, but the maximum allowed depth is 8. You can increase the
allowed depth via the MPI_TYPE_DEPTH environmet variable.<o:p></o:p></p>
<p class=MsoPlainText>MPI Error, rank:0, function:MPI_TYPE_STRUCT, Invalid
datatype argument<o:p></o:p></p>
<p class=MsoPlainText>--pyre-start: mpirun: exit -9<o:p></o:p></p>
<p class=MsoPlainText>/sw/apps/CitcomS/bin/citcoms:
/sw/apps/CitcomS/bin/pycitcoms: exit 1<o:p></o:p></p>
<p class=MsoPlainText><o:p> </o:p></p>
<p class=MsoPlainText>Please can you tell me what I need to do? I understand
that I need to set the env virable MPI_TYPE_DEPTH=10 and rerun the program, but
where do I set this?<o:p></o:p></p>
<p class=MsoPlainText><o:p> </o:p></p>
<p class=MsoNormal>Many thanks,<o:p></o:p></p>
<p class=MsoNormal>Alina<o:p></o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><span style='font-size:10.5pt;font-family:Consolas'>-----------------------------------------<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.5pt;font-family:Consolas'>A. J.
Hale<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.5pt;font-family:Consolas'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.5pt;font-family:Consolas'>Australian
Postdoctoral Research Fellow (APD)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.5pt;font-family:Consolas'>School
of Geosciences <o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.5pt;font-family:Consolas'>Madsen
Building <o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.5pt;font-family:Consolas'>University
of Sydney <o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.5pt;font-family:Consolas'>NSW
2006, AUSTRALIA<o:p></o:p></span></p>
<p class=MsoNormal><o:p> </o:p></p>
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