<html><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div>Hi,</div><div><br></div><div>I am setting up some CitcomS runs on a new shared system. We are required to submit jobs using the pbs system in a slightly different way than I have done before. Specifically, we have to submit an account number using</div><div>#PBS -A accountnumber</div><div>It seems that -A is not included in the job or scheduler options that you can set in the Citcom.cfg file.</div><div>(the available options are: name, queue, walltime, stdin, stdout, and stderr). Is there an easy way to run citcom using pbs scheduler</div><div>that allows me to input the account? I've pasted a sample pbs script below for running on this system.</div><div><br></div><div>Thanks in advance for any help!</div><div>Clint</div><div><font class="Apple-style-span" color="#996633" face="Courier" size="3"><span class="Apple-style-span" style="font-size: 12px;"><font class="Apple-style-span" color="#000000" face="Helvetica"><span class="Apple-style-span" style="font-size: medium;"><br></span></font></span></font></div><div><span class="Apple-style-span" style="font-family: verdana, arial, helvetica, sans-serif; font-size: 12px; "><table width="100%" height="59" border="0" cellpadding="0" cellspacing="0" class="example_table" style="text-align: left; background-color: rgb(230, 255, 230); border-top-style: none; border-right-style: none; border-bottom-style: none; border-left-style: none; border-width: initial; border-color: initial; padding-top: 5px; padding-right: 5px; padding-bottom: 5px; padding-left: 5px; position: static; z-index: auto; "><tbody><tr><td><p>#!/bin/bash<br># 10 minute wall time<br>#PBS -l walltime=00:10:00<br># selecting 2 nodes = 2 * 4 = 8 processors for use, mpiprocs needs to equal ncpus and doesn't exceed 4<br>#PBS -l select=2:mpiprocs=4:ncpus=4<br># scatter required<br>#PBS -l place=scatter<br># account required<br>#PBS -A STAFF0000</p><p>cd $PBS_O_WORKDIR<br>echo "RUNNING ON: `/usr/bin/uniq $PBS_NODEFILE`" <br># note you must use mpirun_jaws to submit MPI jobs on our cluster<br>mpirun_jaws ./my_openmpi_executable</p></td></tr></tbody></table></span></div><div><br></div><div><br></div><div><br></div><div><br></div><div apple-content-edited="true"><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0; "><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; "><div><div><font class="Apple-style-span" color="#996633"><font class="Apple-style-span" face="Courier">---------------------------------------------</font></font></div><div><font class="Apple-style-span" color="#996633"><font class="Apple-style-span" face="Courier">Clint Conrad Assistant Professor</font></font></div><div><span class="Apple-style-span" style="color: rgb(153, 102, 51); font-family: Courier; ">Dept. Geology & Geophysics, SOEST, 804 POST</span></div><div><font class="Apple-style-span" color="#996633"><font class="Apple-style-span" face="Courier">Univ. Hawaii at Manoa ph: 808-956-6649</font></font></div><div><font class="Apple-style-span" color="#996633"><font class="Apple-style-span" face="Courier">1680 East-West Road fax: 808-956-5154</font></font></div><div><font class="Apple-style-span" color="#996633"><font class="Apple-style-span" face="Courier">Honolulu, HI 96822 <a href="mailto:clintc@hawaii.edu">clintc@hawaii.edu</a></font></font></div><div><font class="Apple-style-span" color="#996633"><font class="Apple-style-span" face="Courier"><a href="http://www.soest.hawaii.edu/GG/FACULTY/conrad">http://www.soest.hawaii.edu/GG/FACULTY/conrad</a></font></font></div><div><font class="Apple-style-span" color="#996633"><font class="Apple-style-span" face="Courier">---------------------------------------------</font></font></div><div><br></div></div></span></div></span></div></span></div></span><br class="Apple-interchange-newline"></div></span><br class="Apple-interchange-newline"></span><br class="Apple-interchange-newline"> </div><br></body></html>