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<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";
color:#1F497D'>Hi Eh,<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";
color:#1F497D'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";
color:#1F497D'>Thanks for the tip. I will review the Chapter 3 again and
correct my mistake.<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";
color:#1F497D'>Regards,<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";
color:#1F497D'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";
color:#1F497D'>Logan<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif";
color:#1F497D'><o:p> </o:p></span></p>
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<div style='border:none;border-top:solid #B5C4DF 1.0pt;padding:3.0pt 0in 0in 0in'>
<p class=MsoNormal><b><span style='font-size:10.0pt;font-family:"Tahoma","sans-serif";
color:windowtext'>From:</span></b><span style='font-size:10.0pt;font-family:
"Tahoma","sans-serif";color:windowtext'> Eh Tan [mailto:tan2@geodynamics.org] <br>
<b>Sent:</b> Friday, July 16, 2010 9:46 PM<br>
<b>To:</b> Sankaran, Loganathan (Solution Technology Services)<br>
<b>Cc:</b> cig-mc@geodynamics.org<br>
<b>Subject:</b> Re: [CIG-MC] citcoms and cookbook3 example<o:p></o:p></span></p>
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<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>Hi Logan,<br>
<br>
You are mixing the C-only binary (CitcomSFull) and the input file
(cookbook3.cfg) for the python-embedded binary. There are only two input
examples (in examples/Full and examples/Regional) for C-only binary. The rest
of cookbook examples are for the python embedded binary only. The distinction
of these two binaries is explained in the beginning of Chapter 3 in the manual.<br>
<br>
Cheers,<br>
Eh<br>
<br>
<br>
On 7/13/10 10:37 PM, Sankaran, Loganathan (Solution Technology Services) wrote:
<o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>Hello,</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'> </span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>I
am new to CitcomS. I just built the code and started a run on a single
node (12 cores) as:</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>mpirun
-np 4 CitcomSFull cookbook3.cfg >& cbook3.4.out</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'> </span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>However,
I get an error such as:</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>node
0: error: error: either use z_layer for non dim layer depths, or set num_mat to
four</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>node
1: error: error: either use z_layer for non dim layer depths, or set num_mat to
four</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'> </span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>The
num_mat is already set to 4 in the cfg file. How do I make this work ?</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'> </span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>I
tried the cookbook1 and is asking me to set nodex, nodey which are not set in
the cfg file.</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>What
are the recommended values to these and nodez, if needed ?</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'> </span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>Thanks.</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'> </span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>Logan</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'> </span><o:p></o:p></p>
<p class=MsoNormal><span style='font-family:"Britannic Bold","sans-serif";
color:#7030A0'>Logan Sankaran Ph.D.</span><o:p></o:p></p>
<p class=MsoNormal><span style='color:#7030A0'>Sr. Performance Specialist, HPC
Benchmarking</span><o:p></o:p></p>
<p class=MsoNormal><span style='color:#7030A0'>Solution Technology Services
(STS) </span><o:p></o:p></p>
<p class=MsoNormal><span style='color:#7030A0'>Americas Shared Solutions
Architecture (SSA)</span><o:p></o:p></p>
<p class=MsoNormal><b><span style='color:#7030A0'>Hewlett-Packard Company </span></b><o:p></o:p></p>
<p class=MsoNormal><b><span style='color:#7030A0'>PLANO, Texas, USA</span></b><o:p></o:p></p>
<p class=MsoNormal><b><span style='color:#7030A0'> </span></b><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Futura Bk","sans-serif";
color:#C00000'> 972 - 727 - 9561</span><o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;color:#003300'> <a
href="mailto:logan.sankaran@hp.com">logan.sankaran@hp.com</a></span><o:p></o:p></p>
<p class=MsoNormal> <o:p></o:p></p>
<pre><o:p> </o:p></pre><pre><o:p> </o:p></pre><pre>_______________________________________________<o:p></o:p></pre><pre>CIG-MC mailing list<o:p></o:p></pre><pre><a
href="mailto:CIG-MC@geodynamics.org">CIG-MC@geodynamics.org</a><o:p></o:p></pre><pre><a
href="http://geodynamics.org/cgi-bin/mailman/listinfo/cig-mc">http://geodynamics.org/cgi-bin/mailman/listinfo/cig-mc</a><o:p></o:p></pre><pre> <o:p></o:p></pre>
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