This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by Specfem 3D configure 2.0.1, which was generated by GNU Autoconf 2.66. Invocation command line was $ ./configure FC=gfortran MPIFC=mpif90 ## --------- ## ## Platform. ## ## --------- ## hostname = arling uname -m = x86_64 uname -r = 3.0.0-15-generic uname -s = Linux uname -v = #26-Ubuntu SMP Fri Jan 20 17:23:00 UTC 2012 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = unknown /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /tools/common/mayavi2/gcc-4.6.1/bin PATH: /tools/common/hdf5-1.8.8/gcc-4.6.1/bin PATH: /tools/common/openmpi-1.4.4/gcc-4.6.1/bin PATH: /home/brad/bin PATH: /usr/local/sbin PATH: /usr/local/bin PATH: /usr/sbin PATH: /usr/bin PATH: /sbin PATH: /bin PATH: /usr/games PATH: . PATH: /tools/common/cig/gcc-4.6.1/bin PATH: /tools/common/pylith-dev/gcc-4.6.1/bin PATH: /tools/common/brad/gcc-4.6.1/bin PATH: /tools/common/gmt-4.5.7/gcc-4.6.1/bin PATH: /tools/common/AdobeReader-9.4.6/Adobe/Reader9/bin PATH: /tools/common/lagrit/gcc-4.6.1/bin PATH: /tools/common/sac-101.3b/bin PATH: /tools/common/rdseed-4.7.5/bin PATH: /tools/common/python-tools/gcc-4.6.1/bin PATH: /tools/common/pyre/config/make PATH: /tools/common/eqsim-6.6/gcc-4.6.1/bin PATH: /tools/common/fk-3.0/gcc-4.6.1/bin PATH: /tools/common/pyrex-0.9.8.5/gcc-4.6.1/bin PATH: /tools/common/gdal-1.8.1/gcc-4.6.1/bin PATH: /tools/common/paraview-3.8.1/bin PATH: /tools/common/cuda-4.0.17/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2737: checking for Fortran compiler version configure:2746: gfortran --version >&5 GNU Fortran (Ubuntu/Linaro 4.6.1-9ubuntu3) 4.6.1 Copyright (C) 2011 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:2757: $? = 0 configure:2746: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.6.1/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.6.1-9ubuntu3' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++,go --prefix=/usr --program-suffix=-4.6 --enable-shared --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-plugin --enable-objc-gc --disable-werror --with-arch-32=i686 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.6.1 (Ubuntu/Linaro 4.6.1-9ubuntu3) configure:2757: $? = 0 configure:2746: gfortran -V >&5 gfortran: error: unrecognized option '-V' gfortran: fatal error: no input files compilation terminated. configure:2757: $? = 4 configure:2746: gfortran -qversion >&5 gfortran: error: unrecognized option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:2757: $? = 4 configure:2772: checking whether the Fortran compiler works configure:2794: gfortran conftest.f >&5 configure:2798: $? = 0 configure:2846: result: yes configure:2849: checking for Fortran compiler default output file name configure:2851: result: a.out configure:2857: checking for suffix of executables configure:2864: gfortran -o conftest conftest.f >&5 configure:2868: $? = 0 configure:2890: result: configure:2906: checking whether we are cross compiling configure:2914: gfortran -o conftest conftest.f >&5 configure:2918: $? = 0 configure:2925: ./conftest configure:2929: $? = 0 configure:2944: result: no configure:2949: checking for suffix of object files configure:2965: gfortran -c conftest.f >&5 configure:2969: $? = 0 configure:2990: result: o configure:2998: checking whether we are using the GNU Fortran compiler configure:3011: gfortran -c conftest.F >&5 configure:3011: $? = 0 configure:3020: result: yes configure:3026: checking whether gfortran accepts -g configure:3037: gfortran -c -g conftest.f >&5 configure:3037: $? = 0 configure:3045: result: yes configure:3077: running /bin/bash flags.guess configure:3088: checking how to get verbose linking output from gfortran configure:3098: gfortran -c -g -O2 conftest.f >&5 configure:3098: $? = 0 configure:3116: gfortran -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.6.1-9ubuntu3' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++,go --prefix=/usr --program-suffix=-4.6 --enable-shared --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-plugin --enable-objc-gc --disable-werror --with-arch-32=i686 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.6.1 (Ubuntu/Linaro 4.6.1-9ubuntu3) /usr/lib/gcc/x86_64-linux-gnu/4.6.1/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/4.6.1/finclude -o /tmp/ccuYUvkv.s GNU Fortran (Ubuntu/Linaro 4.6.1-9ubuntu3) version 4.6.1 (x86_64-linux-gnu) compiled by GNU C version 4.6.1, GMP version 5.0.1, MPFR version 3.0.1-p3, MPC version 0.9 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran (Ubuntu/Linaro 4.6.1-9ubuntu3) version 4.6.1 (x86_64-linux-gnu) compiled by GNU C version 4.6.1, GMP version 5.0.1, MPFR version 3.0.1-p3, MPC version 0.9 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as --64 -o /tmp/ccg0o9WF.o /tmp/ccuYUvkv.s Reading specs from /usr/lib/gcc/x86_64-linux-gnu/4.6.1/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/4.6.1/collect2 --build-id --no-add-needed --as-needed --eh-frame-hdr -m elf_x86_64 --hash-style=gnu -dynamic-linker /lib64/ld-linux-x86-64.so.2 -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu/crt1.o /usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.6.1/crtbegin.o -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../.. /tmp/ccg0o9WF.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/4.6.1/crtend.o /usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu/crtn.o configure:3181: result: -v configure:3183: checking for Fortran libraries of gfortran configure:3206: gfortran -o conftest -g -O2 -v conftest.f Using built-in specs. Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.6.1-9ubuntu3' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++,go --prefix=/usr --program-suffix=-4.6 --enable-shared --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-plugin --enable-objc-gc --disable-werror --with-arch-32=i686 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.6.1 (Ubuntu/Linaro 4.6.1-9ubuntu3) /usr/lib/gcc/x86_64-linux-gnu/4.6.1/f951 conftest.f -ffixed-form -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-linux-gnu/4.6.1/finclude -o /tmp/ccCW2Kmp.s GNU Fortran (Ubuntu/Linaro 4.6.1-9ubuntu3) version 4.6.1 (x86_64-linux-gnu) compiled by GNU C version 4.6.1, GMP version 5.0.1, MPFR version 3.0.1-p3, MPC version 0.9 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU Fortran (Ubuntu/Linaro 4.6.1-9ubuntu3) version 4.6.1 (x86_64-linux-gnu) compiled by GNU C version 4.6.1, GMP version 5.0.1, MPFR version 3.0.1-p3, MPC version 0.9 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as --64 -o /tmp/cc52787z.o /tmp/ccCW2Kmp.s Reading specs from /usr/lib/gcc/x86_64-linux-gnu/4.6.1/libgfortran.spec rename spec lib to liborig /usr/lib/gcc/x86_64-linux-gnu/4.6.1/collect2 --build-id --no-add-needed --as-needed --eh-frame-hdr -m elf_x86_64 --hash-style=gnu -dynamic-linker /lib64/ld-linux-x86-64.so.2 -z relro -o conftest /usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu/crt1.o /usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.6.1/crtbegin.o -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../.. /tmp/cc52787z.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/4.6.1/crtend.o /usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu/crtn.o configure:3380: result: -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../.. -lgfortran -lm -lquadmath configure:3439: checking for gcc configure:3455: found /usr/bin/gcc configure:3466: result: gcc configure:3695: checking for C compiler version configure:3704: gcc --version >&5 gcc (Ubuntu/Linaro 4.6.1-9ubuntu3) 4.6.1 Copyright (C) 2011 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:3715: $? = 0 configure:3704: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.6.1/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.6.1-9ubuntu3' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++,go --prefix=/usr --program-suffix=-4.6 --enable-shared --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-plugin --enable-objc-gc --disable-werror --with-arch-32=i686 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.6.1 (Ubuntu/Linaro 4.6.1-9ubuntu3) configure:3715: $? = 0 configure:3704: gcc -V >&5 gcc: error: unrecognized option '-V' gcc: fatal error: no input files compilation terminated. configure:3715: $? = 4 configure:3704: gcc -qversion >&5 gcc: error: unrecognized option '-qversion' gcc: fatal error: no input files compilation terminated. configure:3715: $? = 4 configure:3719: checking whether we are using the GNU C compiler configure:3746: gcc -c conftest.c >&5 configure:3746: $? = 0 configure:3755: result: yes configure:3764: checking whether gcc accepts -g configure:3792: gcc -c -g conftest.c >&5 configure:3792: $? = 0 configure:3849: result: yes configure:3866: checking for gcc option to accept ISO C89 configure:3938: gcc -c -g -O2 conftest.c >&5 configure:3938: $? = 0 configure:3951: result: none needed configure:3977: checking for dummy main to link with Fortran libraries configure:4011: gcc -o conftest -g -O2 conftest.c -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../.. -lgfortran -lm -lquadmath >&5 configure:4011: $? = 0 configure:4056: result: none configure:4089: checking for Fortran name-mangling scheme configure:4102: gfortran -c -g -O2 conftest.f >&5 configure:4102: $? = 0 configure:4143: gcc -o conftest -g -O2 conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../.. -lgfortran -lm -lquadmath >&5 /tmp/cce2Af10.o: In function `main': /home/brad/src/cig/specfem3d/conftest.c:28: undefined reference to `foobar' collect2: ld returned 1 exit status configure:4143: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Specfem 3D" | #define PACKAGE_TARNAME "Specfem3D" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "Specfem 3D 2.0.1" | #define PACKAGE_BUGREPORT "jtromp AT princeton.edu" | #define PACKAGE_URL "" | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:4143: gcc -o conftest -g -O2 conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../.. -lgfortran -lm -lquadmath >&5 configure:4143: $? = 0 configure:4201: gcc -o conftest -g -O2 conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../.. -lgfortran -lm -lquadmath >&5 configure:4201: $? = 0 configure:4243: result: lower case, underscore, no extra underscore configure:4318: checking for Fortran flag to compile .f90 files configure:4334: gfortran -c -g -O2 conftest.f90 >&5 configure:4334: $? = 0 configure:4343: result: none configure:4368: checking for Fortran flag needed to accept free-form source configure:4387: gfortran -c -g -O2 conftest.f90 >&5 configure:4387: $? = 0 configure:4396: result: none configure:4460: checking for gcc configure:4487: result: gcc configure:4716: checking for C compiler version configure:4725: gcc --version >&5 gcc (Ubuntu/Linaro 4.6.1-9ubuntu3) 4.6.1 Copyright (C) 2011 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4736: $? = 0 configure:4725: gcc -v >&5 Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.6.1/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.6.1-9ubuntu3' --with-bugurl=file:///usr/share/doc/gcc-4.6/README.Bugs --enable-languages=c,c++,fortran,objc,obj-c++,go --prefix=/usr --program-suffix=-4.6 --enable-shared --enable-linker-build-id --with-system-zlib --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.6 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-plugin --enable-objc-gc --disable-werror --with-arch-32=i686 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.6.1 (Ubuntu/Linaro 4.6.1-9ubuntu3) configure:4736: $? = 0 configure:4725: gcc -V >&5 gcc: error: unrecognized option '-V' gcc: fatal error: no input files compilation terminated. configure:4736: $? = 4 configure:4725: gcc -qversion >&5 gcc: error: unrecognized option '-qversion' gcc: fatal error: no input files compilation terminated. configure:4736: $? = 4 configure:4740: checking whether we are using the GNU C compiler configure:4776: result: yes configure:4785: checking whether gcc accepts -g configure:4870: result: yes configure:4887: checking for gcc option to accept ISO C89 configure:4972: result: none needed configure:5003: checking how to run the C preprocessor configure:5034: gcc -E conftest.c configure:5034: $? = 0 configure:5048: gcc -E conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:5048: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Specfem 3D" | #define PACKAGE_TARNAME "Specfem3D" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "Specfem 3D 2.0.1" | #define PACKAGE_BUGREPORT "jtromp AT princeton.edu" | #define PACKAGE_URL "" | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | /* end confdefs.h. */ | #include configure:5073: result: gcc -E configure:5093: gcc -E conftest.c configure:5093: $? = 0 configure:5107: gcc -E conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:5107: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Specfem 3D" | #define PACKAGE_TARNAME "Specfem3D" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "Specfem 3D 2.0.1" | #define PACKAGE_BUGREPORT "jtromp AT princeton.edu" | #define PACKAGE_URL "" | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | /* end confdefs.h. */ | #include configure:5136: checking for grep that handles long lines and -e configure:5194: result: /bin/grep configure:5199: checking for egrep configure:5261: result: /bin/grep -E configure:5266: checking for ANSI C header files configure:5294: gcc -c -g -O2 conftest.c >&5 configure:5294: $? = 0 configure:5367: gcc -o conftest -g -O2 conftest.c >&5 configure:5367: $? = 0 configure:5367: ./conftest configure:5367: $? = 0 configure:5378: result: yes configure:5391: checking for sys/types.h configure:5391: gcc -c -g -O2 conftest.c >&5 configure:5391: $? = 0 configure:5391: result: yes configure:5391: checking for sys/stat.h configure:5391: gcc -c -g -O2 conftest.c >&5 configure:5391: $? = 0 configure:5391: result: yes configure:5391: checking for stdlib.h configure:5391: gcc -c -g -O2 conftest.c >&5 configure:5391: $? = 0 configure:5391: result: yes configure:5391: checking for string.h configure:5391: gcc -c -g -O2 conftest.c >&5 configure:5391: $? = 0 configure:5391: result: yes configure:5391: checking for memory.h configure:5391: gcc -c -g -O2 conftest.c >&5 configure:5391: $? = 0 configure:5391: result: yes configure:5391: checking for strings.h configure:5391: gcc -c -g -O2 conftest.c >&5 configure:5391: $? = 0 configure:5391: result: yes configure:5391: checking for inttypes.h configure:5391: gcc -c -g -O2 conftest.c >&5 configure:5391: $? = 0 configure:5391: result: yes configure:5391: checking for stdint.h configure:5391: gcc -c -g -O2 conftest.c >&5 configure:5391: $? = 0 configure:5391: result: yes configure:5391: checking for unistd.h configure:5391: gcc -c -g -O2 conftest.c >&5 configure:5391: $? = 0 configure:5391: result: yes configure:5403: checking emmintrin.h usability configure:5403: gcc -c -g -O2 conftest.c >&5 configure:5403: $? = 0 configure:5403: result: yes configure:5403: checking emmintrin.h presence configure:5403: gcc -E conftest.c configure:5403: $? = 0 configure:5403: result: yes configure:5403: checking for emmintrin.h configure:5403: result: yes configure:5411: checking xmmintrin.h usability configure:5411: gcc -c -g -O2 conftest.c >&5 configure:5411: $? = 0 configure:5411: result: yes configure:5411: checking xmmintrin.h presence configure:5411: gcc -E conftest.c configure:5411: $? = 0 configure:5411: result: yes configure:5411: checking for xmmintrin.h configure:5411: result: yes configure:5482: checking for scotchfarchinit in -lscotch configure:5494: gfortran -o conftest -g -O2 -L/usr/lib conftest.f90 -lscotch -lscotcherr >&5 /usr/bin/ld: cannot find -lscotch /usr/bin/ld: cannot find -lscotcherr collect2: ld returned 1 exit status configure:5494: $? = 1 configure: failed program was: | program main | call scotchfarchinit | end configure:5503: result: no configure:5523: checking whether Scotch is usable configure:5539: result: no, using bundled scotch instead configure:5545: checking for flex configure:5575: result: no configure:5545: checking for lex configure:5575: result: no configure:5703: checking for bison configure:5733: result: no configure:5703: checking for byacc configure:5733: result: no configure:5778: checking build system type configure:5792: result: x86_64-unknown-linux-gnu configure:5812: checking host system type configure:5825: result: x86_64-unknown-linux-gnu configure:6018: checking for the pthreads library -lpthreads configure:6059: gcc -o conftest -g -O2 -I/usr/include/scotch conftest.c -lpthreads >&5 /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status configure:6059: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Specfem 3D" | #define PACKAGE_TARNAME "Specfem3D" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "Specfem 3D 2.0.1" | #define PACKAGE_BUGREPORT "jtromp AT princeton.edu" | #define PACKAGE_URL "" | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_EMMINTRIN 1 | #define HAVE_XMMINTRIN 1 | #define HAVE_SCOTCH 1 | /* end confdefs.h. */ | #include | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | pthread_t th; pthread_join(th, 0); | pthread_attr_init(0); pthread_cleanup_push(0, 0); | pthread_create(0,0,0,0); pthread_cleanup_pop(0); | ; | return 0; | } configure:6068: result: no configure:5963: checking whether pthreads work without any flags configure:6059: gcc -o conftest -g -O2 -I/usr/include/scotch conftest.c >&5 /tmp/ccF6Q3D7.o: In function `main': /home/brad/src/cig/specfem3d/conftest.c:36: undefined reference to `pthread_join' /home/brad/src/cig/specfem3d/conftest.c:37: undefined reference to `__pthread_register_cancel' /home/brad/src/cig/specfem3d/conftest.c:38: undefined reference to `pthread_create' /home/brad/src/cig/specfem3d/conftest.c:38: undefined reference to `__pthread_unregister_cancel' collect2: ld returned 1 exit status configure:6059: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Specfem 3D" | #define PACKAGE_TARNAME "Specfem3D" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "Specfem 3D 2.0.1" | #define PACKAGE_BUGREPORT "jtromp AT princeton.edu" | #define PACKAGE_URL "" | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_EMMINTRIN 1 | #define HAVE_XMMINTRIN 1 | #define HAVE_SCOTCH 1 | /* end confdefs.h. */ | #include | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | pthread_t th; pthread_join(th, 0); | pthread_attr_init(0); pthread_cleanup_push(0, 0); | pthread_create(0,0,0,0); pthread_cleanup_pop(0); | ; | return 0; | } configure:6068: result: no configure:5968: checking whether pthreads work with -Kthread configure:6059: gcc -o conftest -g -O2 -Kthread -I/usr/include/scotch conftest.c >&5 gcc: error: unrecognized option '-Kthread' configure:6059: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Specfem 3D" | #define PACKAGE_TARNAME "Specfem3D" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "Specfem 3D 2.0.1" | #define PACKAGE_BUGREPORT "jtromp AT princeton.edu" | #define PACKAGE_URL "" | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_EMMINTRIN 1 | #define HAVE_XMMINTRIN 1 | #define HAVE_SCOTCH 1 | /* end confdefs.h. */ | #include | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | pthread_t th; pthread_join(th, 0); | pthread_attr_init(0); pthread_cleanup_push(0, 0); | pthread_create(0,0,0,0); pthread_cleanup_pop(0); | ; | return 0; | } configure:6068: result: no configure:5968: checking whether pthreads work with -kthread configure:6059: gcc -o conftest -g -O2 -kthread -I/usr/include/scotch conftest.c >&5 gcc: error: unrecognized option '-kthread' configure:6059: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Specfem 3D" | #define PACKAGE_TARNAME "Specfem3D" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "Specfem 3D 2.0.1" | #define PACKAGE_BUGREPORT "jtromp AT princeton.edu" | #define PACKAGE_URL "" | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_EMMINTRIN 1 | #define HAVE_XMMINTRIN 1 | #define HAVE_SCOTCH 1 | /* end confdefs.h. */ | #include | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | pthread_t th; pthread_join(th, 0); | pthread_attr_init(0); pthread_cleanup_push(0, 0); | pthread_create(0,0,0,0); pthread_cleanup_pop(0); | ; | return 0; | } configure:6068: result: no configure:6018: checking for the pthreads library -llthread configure:6059: gcc -o conftest -g -O2 -I/usr/include/scotch conftest.c -llthread >&5 /usr/bin/ld: cannot find -llthread collect2: ld returned 1 exit status configure:6059: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "Specfem 3D" | #define PACKAGE_TARNAME "Specfem3D" | #define PACKAGE_VERSION "2.0.1" | #define PACKAGE_STRING "Specfem 3D 2.0.1" | #define PACKAGE_BUGREPORT "jtromp AT princeton.edu" | #define PACKAGE_URL "" | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_EMMINTRIN 1 | #define HAVE_XMMINTRIN 1 | #define HAVE_SCOTCH 1 | /* end confdefs.h. */ | #include | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | pthread_t th; pthread_join(th, 0); | pthread_attr_init(0); pthread_cleanup_push(0, 0); | pthread_create(0,0,0,0); pthread_cleanup_pop(0); | ; | return 0; | } configure:6068: result: no configure:5968: checking whether pthreads work with -pthread configure:6059: gcc -o conftest -g -O2 -pthread -I/usr/include/scotch conftest.c >&5 configure:6059: $? = 0 configure:6068: result: yes configure:6087: checking for joinable pthread attribute configure:6110: gcc -o conftest -g -O2 -pthread -I/usr/include/scotch conftest.c >&5 configure:6110: $? = 0 configure:6116: result: PTHREAD_CREATE_JOINABLE configure:6126: checking if more special flags are required for pthreads configure:6133: result: no configure:6200: result: pthread found configure:6505: checking whether mpif.h works configure:6521: mpif90 -c -g -O2 -std=gnu -fimplicit-none -frange-check -O2 -pedantic -pedantic-errors -Waliasing -Wampersand -Wline-truncation -Wsurprising -Wunderflow conftest.f90 >&5 mpif-config.h:73.18: Included at mpif-common.h:70: Included at mpif.h:59: Included at conftest.f90:4: character*32 OMPI_GREEK_VERSION 1 Warning: Obsolescent feature: Old-style character length at (1) mpif-config.h:74.18: Included at mpif-common.h:70: Included at mpif.h:59: Included at conftest.f90:4: character*32 OMPI_SVN_VERSION 1 Warning: Obsolescent feature: Old-style character length at (1) configure:6521: $? = 0 configure:6523: result: yes configure:6815: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by Specfem 3D config.status 2.0.1, which was generated by GNU Autoconf 2.66. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on arling config.status:887: creating Makefile config.status:887: creating src/meshfem3D/Makefile config.status:887: creating src/meshfem3D/constants.h config.status:887: creating src/meshfem3D/precision.h config.status:887: creating src/decompose_mesh_SCOTCH/Makefile config.status:887: creating src/specfem3D/Makefile config.status:887: creating src/generate_databases/Makefile config.status:887: creating src/shared/constants.h config.status:887: creating src/shared/precision.h config.status:887: creating src/decompose_mesh_SCOTCH/scotch_5.1.11/src/Makefile.inc config.status:887: creating src/check_mesh_quality_CUBIT_Abaqus/Makefile config.status:887: creating config.h ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=gfortran ac_cv_env_FLAGS_CHECK_set= ac_cv_env_FLAGS_CHECK_value= ac_cv_env_FLAGS_NO_CHECK_set= ac_cv_env_FLAGS_NO_CHECK_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LOCAL_PATH_IS_ALSO_GLOBAL_set= ac_cv_env_LOCAL_PATH_IS_ALSO_GLOBAL_value= ac_cv_env_MPICC_set= ac_cv_env_MPICC_value= ac_cv_env_MPIFC_set=set ac_cv_env_MPIFC_value=mpif90 ac_cv_env_MPILIBS_set= ac_cv_env_MPILIBS_value= ac_cv_env_PYTHONPATH_set=set ac_cv_env_PYTHONPATH_value=/tools/common/mayavi2/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/cig/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/pylith-dev/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/brad/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/python-tools/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/eqsim-6.6/gcc-4.6.1/modules:/home/brad/tools/pylab:/home/brad/tools/blender/modules:/home/brad/tools/blender/scripts:/tools/common/pyrex-0.9.8.5/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/gdal-1.8.1/gcc-4.6.1/lib/python2.7/site-packages ac_cv_env_PYTHON_set= ac_cv_env_PYTHON_value= ac_cv_env_SCOTCH_DIR_set= ac_cv_env_SCOTCH_DIR_value= ac_cv_env_SCOTCH_INCLUDEDIR_set= ac_cv_env_SCOTCH_INCLUDEDIR_value= ac_cv_env_SCOTCH_LIBDIR_set= ac_cv_env_SCOTCH_LIBDIR_value= ac_cv_env_USE_BUNDLED_SCOTCH_set= ac_cv_env_USE_BUNDLED_SCOTCH_value= ac_cv_env_YACC_set= ac_cv_env_YACC_value= ac_cv_env_YFLAGS_set= ac_cv_env_YFLAGS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_fc_compiler_gnu=yes ac_cv_fc_dummy_main=none ac_cv_fc_freeform=none ac_cv_fc_libs=' -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../.. -lgfortran -lm -lquadmath' ac_cv_fc_mangling='lower case, underscore, no extra underscore' ac_cv_fc_srcext_f90=none ac_cv_fortran_dummy_main=none ac_cv_header_emmintrin_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_unistd_h=yes ac_cv_header_xmmintrin_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_lib_scotch_scotchfarchinit_=no ac_cv_objext=o ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_GREP=/bin/grep ac_cv_prog_CPP='gcc -E' ac_cv_prog_ac_ct_CC=gcc ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_fc_g=yes ac_cv_prog_fc_v=-v ## ----------------- ## ## Output variables. ## ## ----------------- ## CC='gcc' CFLAGS='-g -O2' COND_MPI_FALSE='#' COND_MPI_TRUE='' COND_PYRE_FALSE='' COND_PYRE_TRUE='#' CPP='gcc -E' CPPFLAGS=' -I/usr/include/scotch' CUSTOM_MPI_TYPE='MPI_REAL' CUSTOM_REAL='SIZE_REAL' DEFS='-DHAVE_CONFIG_H' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/bin/grep -E' EXEEXT='' FC='gfortran' FCENV='' FCFLAGS='-g -O2' FCFLAGS_f90='' FCLIBS=' -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1/../../.. -lgfortran -lm -lquadmath' FLAGS_CHECK='$(FLAGS_NO_CHECK)' FLAGS_NO_CHECK='-std=gnu -fimplicit-none -frange-check -O2 -pedantic -pedantic-errors -Waliasing -Wampersand -Wline-truncation -Wsurprising -Wunderflow' GREP='/bin/grep' LDFLAGS='' LEX=':' LEXLIB='' LEX_OUTPUT_ROOT='' LIBOBJS='' LIBS='' LOCAL_PATH_IS_ALSO_GLOBAL='true' LTLIBOBJS='' MPICC='mpicc' MPIFC='mpif90' MPILIBS='' OBJEXT='o' PACKAGE_BUGREPORT='jtromp AT princeton.edu' PACKAGE_NAME='Specfem 3D' PACKAGE_STRING='Specfem 3D 2.0.1' PACKAGE_TARNAME='Specfem3D' PACKAGE_URL='' PACKAGE_VERSION='2.0.1' PATH_SEPARATOR=':' PTHREAD_CC='gcc' PTHREAD_CFLAGS='-pthread' PTHREAD_LIBS='' PYTHON='' PYTHONPATH='/tools/common/mayavi2/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/cig/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/pylith-dev/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/brad/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/python-tools/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/eqsim-6.6/gcc-4.6.1/modules:/home/brad/tools/pylab:/home/brad/tools/blender/modules:/home/brad/tools/blender/scripts:/tools/common/pyrex-0.9.8.5/gcc-4.6.1/lib/python2.7/site-packages:/tools/common/gdal-1.8.1/gcc-4.6.1/lib/python2.7/site-packages' PYTHON_BLDLIBRARY='' PYTHON_EGG_CFLAGS='' PYTHON_EGG_CPPFLAGS='' PYTHON_EGG_LDFLAGS='' PYTHON_EXEC_PREFIX='' PYTHON_INCDIR='' PYTHON_LA_LDFLAGS='' PYTHON_LDFLAGS='' PYTHON_LDLAST='' PYTHON_LDLIBRARY='' PYTHON_LIBDIR='' PYTHON_LIBP='' PYTHON_LIBPL='' PYTHON_LIBS='' PYTHON_LINKFORSHARED='' PYTHON_MODLIBS='' PYTHON_PLATFORM='' PYTHON_PREFIX='' PYTHON_SYSLIBS='' PYTHON_VERSION='2.7' SCOTCH_DIR='scotch_5.1.11' SCOTCH_INCLUDEDIR='scotch_5.1.11/include' SCOTCH_LIBDIR='scotch_5.1.11/lib' SHELL='/bin/bash' USE_BUNDLED_SCOTCH='1' YACC='yacc' YFLAGS='' ac_ct_CC='gcc' ac_ct_FC='' acx_pthread_config='' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' oldincludedir='/usr/include' pdfdir='${docdir}' pkgpyexecdir='' pkgpythondir='' prefix='/usr/local' program_transform_name='s,x,x,' psdir='${docdir}' pyexecdir='' pythondir='' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "Specfem 3D" #define PACKAGE_TARNAME "Specfem3D" #define PACKAGE_VERSION "2.0.1" #define PACKAGE_STRING "Specfem 3D 2.0.1" #define PACKAGE_BUGREPORT "jtromp AT princeton.edu" #define PACKAGE_URL "" #define FC_FUNC(name,NAME) name ## _ #define FC_FUNC_(name,NAME) name ## _ #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_EMMINTRIN 1 #define HAVE_XMMINTRIN 1 #define HAVE_SCOTCH 1 configure: exit 0