<div dir="ltr">If that's fine with everyone, I propose we do it on Monday . <div>I'll work with Eric for the specifics of the implementation we want.</div><div>Best,</div><div>David<br><div><br></div></div></div><div class="gmail_extra">
<br><br><div class="gmail_quote">On Fri, Nov 8, 2013 at 3:18 PM, Dimitri Komatitsch <span dir="ltr"><<a href="mailto:komatitsch@lma.cnrs-mrs.fr" target="_blank">komatitsch@lma.cnrs-mrs.fr</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<br>
Dear all,<br>
<br>
Let us quickly switch to a single repository because the current situation is becoming difficult to manage.<br>
<br>
Thanks,<br>
Best regards,<br>
<br>
Dimitri.<div class="HOEnZb"><div class="h5"><br>
<br>
On 11/08/2013 09:13 PM, emanuele casarotti wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hi Brad<br>
<br>
Specfem3d and geocubit are currently in the svn CIG repository. We are<br>
planning to start the transition to CIG github umbrella next week.<br>
In the homogeneous examples there is a full example of using the new workflow.<br>
<br>
I stopped to use my own geocubit GitHub but I'm referring to it for<br>
the wiki part since could be useful for installation and examples (it<br>
is my first contribution to the official wiki).<br>
<br>
More examples are in my Dropbox (Dimitri have already mentioned to<br>
include them urgently under the cig umbrella ... I'm working on it but<br>
I don't want mess up the upcoming github transition so I was thinking<br>
to start next week)<br>
<br>
Regards,<br>
Emanuele<br>
<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Il giorno 08/nov/2013, alle ore 19:53, Brad Aagaard <<a href="mailto:baagaard@usgs.gov" target="_blank">baagaard@usgs.gov</a>> ha scritto:<br>
<br>
SPECFEM and GEOCUBIT developers,<br>
<br>
I realize the repositories may be under migration to GitHub, but as someone who is trying to follow SPECFEM and GEOCUBIT development, I am confused as to what the definitive repositories are. Dimitri recently referred to GitHub repos, Emanuele is referring to the CIG SCPECFEM SVN repository and his own GitHub GEOCUBIT repository. I don't see any SPECFEM or GEOCUBIT stuff under the CIG GitHub umbrella (<a href="http://github.com/geodynamics" target="_blank">github.com/geodynamics</a>).<br>
<br>
What are the current repositories for usable versions of SPECFEM and GEOCUBIT? Is there something holding you up in migrating everything to the CIG GitHub umbrella?<br>
<br>
For PyLith, we found the transition very smooth and have found the PETSc Git workflow (<a href="https://bitbucket.org/petsc/petsc/wiki/Home" target="_blank">https://bitbucket.org/petsc/<u></u>petsc/wiki/Home</a>) to be extremely useful. Bleeding edge development can occur independently in branches while maintaining a stable 'master' branch with the latest known working features.<br>
<br>
Regards,<br>
Brad<br>
<br>
<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
On 11/08/2013 10:22 AM, emanuele casarotti wrote:<br>
hi all,<br>
<br>
if you want to use that script outside the cubit gui, you need to set<br>
the path of cubit....<br>
if you are using the last version of the code on the svn the approach<br>
is different from block_mesh.py since we have substituted the<br>
cubit2specfem3d.py script with the geocubit library<br>
<br>
<br>
consider that we are restyling the examples so the following links<br>
will be not available in the future....<br>
<br>
I assume that you are using the last version of the code in the svn<br>
<br>
<br>
if you want to use that script outside the cubit gui, you need to set<br>
the path of cubit....<br>
<br>
see here for more information<br>
<a href="https://github.com/casarotti/GEOCUBIT--experimental/wiki/_pages" target="_blank">https://github.com/casarotti/<u></u>GEOCUBIT--experimental/wiki/_<u></u>pages</a><br>
<br>
or<br>
<br>
the last version of the svn repository<br>
<a href="http://www.geodynamics.org/wsvn/cig/seismo/3D/SPECFEM3D/trunk/CUBIT_GEOCUBIT/" target="_blank">http://www.geodynamics.org/<u></u>wsvn/cig/seismo/3D/SPECFEM3D/<u></u>trunk/CUBIT_GEOCUBIT/</a><br>
<br>
and this examples<br>
<br>
<a href="http://www.geodynamics.org/wsvn/cig/seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace_HEX8_elastic_absorbing_Stacey_5sides/" target="_blank">http://www.geodynamics.org/<u></u>wsvn/cig/seismo/3D/SPECFEM3D/<u></u>trunk/examples/homogeneous_<u></u>halfspace_HEX8_elastic_<u></u>absorbing_Stacey_5sides/</a><br>
<br>
but here you can find some examples when you have already a mesh<br>
<br>
<a href="https://github.com/casarotti/GEOCUBIT--experimental/wiki/2-LAYERS:-USING-GEOCUBIT-IN-THE-CUBIT-GUI,-DEFINING-BOUNDARY-CONDITIONS" target="_blank">https://github.com/casarotti/<u></u>GEOCUBIT--experimental/wiki/2-<u></u>LAYERS:-USING-GEOCUBIT-IN-THE-<u></u>CUBIT-GUI,-DEFINING-BOUNDARY-<u></u>CONDITIONS</a><br>
<br>
as block_mesh.py did<br>
<br>
<br>
<br>
<br>
<br>
<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
On Fri, Nov 8, 2013 at 5:02 PM, Max Rietmann <<a href="mailto:max.rietmann@usi.ch" target="_blank">max.rietmann@usi.ch</a>> wrote:<br>
One way is to run these scripts from within cubit. I don't know how to load<br>
cubit as a library from within python.<br>
<br>
See the examples directory within specfem3d for an example how to use this.<br>
I've attached a demo.<br>
<br>
best,<br>
Max<br>
<br>
<br>
On 11/08/2013 04:54 PM, <a href="mailto:s.khan-1@utwente.nl" target="_blank">s.khan-1@utwente.nl</a> wrote:<br>
<br>
Dear All,<br>
<br>
I have created a geometrical model in cubit named 3rd_mesh.cub. I am unable<br>
to figure out how to specify this file to 'cubit2specfem3d.py'. I am trying<br>
to use 'cubit2specfem3d.py' and 'run_cubit2specfem3d.py' but i receive the<br>
following messages.<br>
<br>
------------------------------<u></u>------------------------------<u></u>------------------------------<u></u>------------------------------<u></u>-------------<br>
khan31332@itclx03:~/SPECFEM3D/<u></u>examples/Basin$ python run_cubit2specfem3d.py<br>
Traceback (most recent call last):<br>
File "run_cubit2specfem3d.py", line 4, in <module><br>
import cubit<br>
ImportError: No module named cubit<br>
------------------------------<u></u>------------------------------<u></u>------------------------------<u></u>------------------------------<u></u>-------------<br>
khan31332@itclx03:~/SPECFEM3D/<u></u>examples/Basin$ python cubit2specfem3d.py<br>
Traceback (most recent call last):<br>
File "cubit2specfem3d.py", line 772, in <module><br>
export2SESAME(path)<br>
File "cubit2specfem3d.py", line 764, in export2SESAME<br>
cubit.cmd('set info on')<br>
NameError: global name 'cubit' is not defined<br>
------------------------------<u></u>------------------------------<u></u>------------------------------<u></u>------------------------------<u></u>-------------<br>
<br>
Thanks in advance.<br>
<br>
Best regards,<br>
Saad Khan<br>
<br>
<br>
<br>
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<br></div></div><span class="HOEnZb"><font color="#888888">
-- <br>
Dimitri Komatitsch<br>
CNRS Research Director (DR CNRS), Laboratory of Mechanics and Acoustics,<br>
UPR 7051, Marseille, France <a href="http://komatitsch.free.fr" target="_blank">http://komatitsch.free.fr</a></font></span><div class="HOEnZb"><div class="h5"><br>
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</div></div></blockquote></div><br><br clear="all"><div><br></div>-- <br><div dir="ltr">David Luet<div><div>Linux Administrator/Software & Programming Analyst</div><div>Princeton University</div><div>Department of Geosciences & PICSciE</div>
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