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Hi Yaru,<div><br class="webkit-block-placeholder"></div><div>Sorry I missed the beginning of this thread. It's strange that the build is complaining about there being no pythia, since you didn't enable it on the command line. I would enable it, though, since I think you're going to want it. Also, I noticed that you're not specifying a prefix. That's OK if you want everything to end up in the default location (/usr). Otherwise, you should give a location where you want to install. Finally, you will want to add ${INSTALL_LOCATION}/lib/python2.5/site-packages to your PYTHONPATH (I noticed that you have python2.5). If your spatialdata installation proceeds without error, make sure this directory exists. So, for your spatialdata configure, I would do:</div><div><br class="webkit-block-placeholder"></div><div>./configure --enable-pythia --prefix=/path/to/install</div><div><br class="webkit-block-placeholder"></div><div>When you do that, it should download the version of pythia that you need, and after you do a make; make install, you should have pythia on your PYTHONPATH. Let me know how this works.</div><div><br class="webkit-block-placeholder"></div><div>Cheers,</div><div>Charles</div><div> </div><div><br><div><div>On Nov 5, 2007, at 10:48 PM, yaru wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Hi, Brad</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">I output a log file in every step. Could you check it again? Please look at</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">the following<span class="Apple-converted-space"> </span></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">$cd /data</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">$svn co <a href="http://geodynamics.org/svn/cig/cs/spatialdata-0.1/trunk">http://geodynamics.org/svn/cig/cs/spatialdata-0.1/trunk</a> spatialdata</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">$cd spatialdata</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">$autoreconf -if</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">$./configure</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">$make >& spatialdata_make.log</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">$make install >& spatialdata_install.log</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">There are errors in spatialdata_install.log:</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">error: Could not find suitable distribution for<span class="Apple-converted-space"> </span></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Requirement.parse('pythia[mpi]>=0.8.1.4,<0.8.2a')</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">make[3]: *** [install-data-hook] Error 1</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">make[3]: Leaving directory `/data/spatialdata'</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">make[2]: *** [install-data-am] Error 2</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">make[2]: Leaving directory `/data/spatialdata'</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">make[1]: *** [install-am] Error 2</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">make[1]: Leaving directory `/data/spatialdata'</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">make: *** [install-recursive] Error 1</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Is it ok to ignore these error messages and continue the installation?</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Anyway, I try to ignore all errors and install PyLith as the following:</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">However, I still can not successfully install PyLith.</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">$cd /data/pylith/pylith-1.0.1</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">$./configure CXXFLAGS=-DNEW_SECTION --prefix=/data/cig</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking dynamic linker characteristics... GNU/Linux ld.so</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking how to hardcode library paths into programs... immediate</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking whether stripping libraries is possible... yes</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for a BSD-compatible install... /usr/bin/install -c</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for nemesis... /data/cig/bin/nemesis</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking whether /data/cig/bin/nemesis version >= 2.3... yes</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for /data/cig/bin/nemesis version... 2.5</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for /data/cig/bin/nemesis platform... linux2</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for /data/cig/bin/nemesis script directory...<span class="Apple-converted-space"> </span></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">${prefix}/lib/python2.5/site-packages</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for /data/cig/bin/nemesis extension module directory...<span class="Apple-converted-space"> </span></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">${exec_prefix}/lib/python2.5/site-packages</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking /data/cig/bin/nemesis sysconfig... ok</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for PETSc dir... /data/petsc-dev</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for PETSc arch... linux-gnu-cxx-debug</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for PETSc config...<span class="Apple-converted-space"> </span></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">/data/petsc-dev/linux-gnu-cxx-debug/conf/petscconf</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for PETSc version == 2.3.3... yes</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for PetscInitialize... yes (C++)</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for petsc.h... yes</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking whether we can link a trivial C++ PETSc program... yes</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for PetscInitialize... yes (C++)</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">checking for PETSc/Sieve... yes</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">configure: downloading missing Python dependencies</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">configure: error: cannot download missing Python dependencies</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">See `config.log' for more details.</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Thank you for your help,</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; min-height: 14px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Yaru<span class="Apple-converted-space"> </span><span><spatialdata_make.log></span><span><Pylith_config.log></span><span><spatialdata_config.log></span><span><spatialdata_install.log></span>_______________________________________________</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">CIG-SHORT mailing list</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><a href="mailto:CIG-SHORT@geodynamics.org">CIG-SHORT@geodynamics.org</a></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><a href="http://geodynamics.org/cgi-bin/mailman/listinfo/cig-short">http://geodynamics.org/cgi-bin/mailman/listinfo/cig-short</a></div> </blockquote></div><br><div> <p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="3" style="font: 12.0px Helvetica">Charles A. Williams</font></p> <p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="3" style="font: 12.0px Helvetica">Dept. of Earth & Environmental Sciences</font></p> <p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="3" style="font: 12.0px Helvetica">Science Center, 2C01B</font></p> <p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="3" style="font: 12.0px Helvetica">Rensselaer Polytechnic Institute</font></p> <p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="3" style="font: 12.0px Helvetica">Troy, NY<span class="Apple-converted-space"> </span>12180</font></p> <p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="3" style="font: 12.0px Helvetica">Phone:<span class="Apple-converted-space"><span class="Apple-converted-tab"> </span></span>(518) 276-3369</font></p> <p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="3" style="font: 12.0px Helvetica">FAX:<span class="Apple-converted-space"><span class="Apple-converted-tab"> </span></span>(518) 276-2012</font></p> <p style="margin: 0.0px 0.0px 0.0px 0.0px"><font face="Helvetica" size="3" style="font: 12.0px Helvetica">e-mail:<span class="Apple-converted-space"><span class="Apple-converted-tab"> </span></span><a href="mailto:willic3@rpi.edu">willic3@rpi.edu</a></font></p> <br class="Apple-interchange-newline"> </div><br></div></body></html>