>> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/utils/PetscManager.py:47:initialize
 -- petsc(info)
 -- Initializing PETSc.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/meshio/MeshIO.py:45:read
 -- meshioascii(info)
 -- Reading finite-element mesh
Creating new arrow section: orientation
Creating new real section: coordinates
Adding coordinates for vertex 2
Adding coordinates for vertex 3
Adding coordinates for vertex 4
Adding coordinates for vertex 5
Adding coordinates for vertex 6
Creating new int section: fault
Creating new int section: end points
Creating new int section: edge 1
Creating new arrow section: orientation
Checking fault vertex 3
  Checking cell 0
    contains fault vertex 3
    contains fault vertex 4
    contains fault vertex 5
  Contains a face on the fault
  Orienting face 7
    vertex 3
    vertex 4
    vertex 5
    vertex 2
  Reversing initial face orientation
    Boundary vertex 5
    Boundary vertex 4
    Boundary vertex 3
  Adding simplicial face 7
  Checking cell 1
    contains fault vertex 3
    contains fault vertex 5
    contains fault vertex 4
  Contains a face on the fault
Checking fault vertex 4
  Checking cell 0
  Checking cell 1
Checking fault vertex 5
  Checking cell 1
  Checking cell 0
viewing Mesh 'Fault mesh'
viewing Sieve :'mesh sieve'
cap --> base:
[0]: 3--(1)-->13
[0]: 3--(1)-->14
[0]: 4--(0)-->13
[0]: 4--(1)-->15
[0]: 5--(0)-->14
[0]: 5--(0)-->15
[0]: 7--(0)-->0
[0]: 7--(0)-->1
[0]: 13--(0)-->7
[0]: 14--(1)-->7
[0]: 15--(2)-->7
base --> cap:
[0]: 0<--(0)--7
[0]: 1<--(0)--7
[0]: 7<--(0)--13
[0]: 7<--(1)--14
[0]: 7<--(2)--15
[0]: 13<--(0)--4
[0]: 13<--(1)--3
[0]: 14<--(0)--5
[0]: 14<--(1)--3
[0]: 15<--(0)--5
[0]: 15<--(1)--4
cap <point, outdegree, marker, depth, height>:
[0]:  [ <3, 0, 0, 0, 0> <4, 0, 0, 0, 0> <5, 0, 0, 0, 0> <7, 0, 0, 0, 0> <13, 0, 0, 0, 0> <14, 0, 0, 0, 0> <15, 0, 0, 0, 0> ]
base <point, indegree, marker, depth, height>:
[0]:  [ <0,0, 0, 0, 0> <1,0, 0, 0, 0> <7,0, 0, 0, 0> <13,0, 0, 0, 0> <14,0, 0, 0, 0> <15,0, 0, 0, 0> ]
viewing UniformSection 'orientation'
[0]:   13 ----> 7 dim 1   1
[0]:   14 ----> 7 dim 1   -2
[0]:   15 ----> 7 dim 1   1
viewing Mesh 'Fault boundary mesh'
viewing a Sieve, comm = 1140850688, commRank = 0
viewing Sieve :'mesh sieve'
cap --> base:
[0]: 3--(1)-->13
[0]: 3--(1)-->14
[0]: 4--(0)-->13
[0]: 4--(1)-->15
[0]: 5--(0)-->14
[0]: 5--(0)-->15
base --> cap:
[0]: 13<--(0)--4
[0]: 13<--(1)--3
[0]: 14<--(0)--5
[0]: 14<--(1)--3
[0]: 15<--(0)--5
[0]: 15<--(1)--4
cap <point, outdegree, marker, depth, height>:
[0]:  [ <3, 0, 0, 0, 0> <4, 0, 0, 0, 0> <5, 0, 0, 0, 0> ]
base <point, indegree, marker, depth, height>:
[0]:  [ <13,0, 0, 0, 0> <14,0, 0, 0, 0> <15,0, 0, 0, 0> ]
  Fault corners 3
  Fault face size 2
  Checking orientation of fault face 13
  Checking orientation of fault face 14
  Checking orientation of fault face 15
  Checking orientation of fault face 13
  Checking orientation of fault face 14
  Checking orientation of fault face 15
viewing Mesh 'Oriented Fault mesh'
viewing Sieve :'mesh sieve'
cap --> base:
[0]: 3--(1)-->13
[0]: 3--(1)-->14
[0]: 4--(0)-->13
[0]: 4--(1)-->15
[0]: 5--(0)-->14
[0]: 5--(0)-->15
[0]: 7--(0)-->0
[0]: 7--(0)-->1
[0]: 13--(0)-->7
[0]: 14--(1)-->7
[0]: 15--(2)-->7
base --> cap:
[0]: 0<--(0)--7
[0]: 1<--(0)--7
[0]: 7<--(0)--13
[0]: 7<--(1)--14
[0]: 7<--(2)--15
[0]: 13<--(0)--4
[0]: 13<--(1)--3
[0]: 14<--(0)--5
[0]: 14<--(1)--3
[0]: 15<--(0)--5
[0]: 15<--(1)--4
cap <point, outdegree, marker, depth, height>:
[0]:  [ <3, 0, 0, 0, 0> <4, 0, 0, 0, 0> <5, 0, 0, 0, 0> <7, 0, 0, 0, 0> <13, 0, 0, 0, 0> <14, 0, 0, 0, 0> <15, 0, 0, 0, 0> ]
base <point, indegree, marker, depth, height>:
[0]:  [ <0,0, 0, 0, 0> <1,0, 0, 0, 0> <7,0, 0, 0, 0> <13,0, 0, 0, 0> <14,0, 0, 0, 0> <15,0, 0, 0, 0> ]
viewing UniformSection 'orientation'
[0]:   13 ----> 7 dim 1   1
[0]:   14 ----> 7 dim 1   -2
[0]:   15 ----> 7 dim 1   1
Duplicating 3 to 7
Duplicating 4 to 9
Duplicating 5 to 11
Considering fault face 7
  Checking orientation against cell 0
    vertex 3
    vertex 4
    vertex 5
    vertex 2
  Reversing initial face orientation
    Checking 4 against 4
    Checking 3 against 3
    Checking 5 against 5
  Choosing other cell
  Creating cohesive cell 13
    vertex 4
    vertex 3
    vertex 5
    shadow vertex 9
    shadow vertex 7
    shadow vertex 11
    Lagrange vertex 10
    Lagrange vertex 8
    Lagrange vertex 12
Checking fault vertex 3
Checking fault vertex 4
Checking fault vertex 5
Creating new real section: replacedCells
    vertex 7
    vertex 11
    vertex 9
    vertex 6
  Replacing cell 1
viewing Mesh 'Mesh with Cohesive Elements'
viewing Sieve :'mesh sieve'
cap --> base:
[0]: 2--(3)-->0
[0]: 3--(0)-->0
[0]: 3--(1)-->13
[0]: 4--(0)-->13
[0]: 4--(1)-->0
[0]: 5--(2)-->0
[0]: 5--(2)-->13
[0]: 6--(3)-->1
[0]: 7--(0)-->1
[0]: 7--(4)-->13
[0]: 8--(7)-->13
[0]: 9--(2)-->1
[0]: 9--(3)-->13
[0]: 10--(6)-->13
[0]: 11--(1)-->1
[0]: 11--(5)-->13
[0]: 12--(8)-->13
base --> cap:
[0]: 0<--(0)--3
[0]: 0<--(1)--4
[0]: 0<--(2)--5
[0]: 0<--(3)--2
[0]: 1<--(0)--7
[0]: 1<--(1)--11
[0]: 1<--(2)--9
[0]: 1<--(3)--6
[0]: 13<--(0)--4
[0]: 13<--(1)--3
[0]: 13<--(2)--5
[0]: 13<--(3)--9
[0]: 13<--(4)--7
[0]: 13<--(5)--11
[0]: 13<--(6)--10
[0]: 13<--(7)--8
[0]: 13<--(8)--12
cap <point, outdegree, marker, depth, height>:
[0]:  [ <2, 0, 0, 0, 0> <3, 0, 0, 0, 0> <4, 0, 0, 0, 0> <5, 0, 0, 0, 0> <6, 0, 0, 0, 0> <7, 0, 0, 0, 0> <8, 0, 0, 0, 0> <9, 0, 0, 0, 0> <10, 0, 0, 0, 0> <11, 0, 0, 0, 0> <12, 0, 0, 0, 0> ]
base <point, indegree, marker, depth, height>:
[0]:  [ <0,0, 0, 0, 0> <1,0, 0, 0, 0> <13,0, 0, 0, 0> ]
viewing GeneralSection 'coordinates'
  Fields: 0
[0]:   2 dim 3 offset 0   -1 0 0
[0]:   3 dim 3 offset 3   0 -1 0
[0]:   4 dim 3 offset 6   0 0 1
[0]:   5 dim 3 offset 9   0 1 0
[0]:   6 dim 3 offset 12   1 0 0
viewing GeneralSection 'replacedCells'
  Fields: 0
[0]:   0 dim 1 offset 0   -1
[0]:   1 dim 1 offset 1   1
viewing Section edge 1
: edge 1'
[0]:   2 dim 1 offset 0   0
[0]:   3 dim 1 offset 1   0
[0]:   4 dim 1 offset 2   0
[0]:   6 dim 1 offset 3   0
[0]:   7 dim 1 offset 4   0
[0]:   9 dim 1 offset 5   0
viewing Section end points
: end points'
[0]:   2 dim 1 offset 0   0
[0]:   6 dim 1 offset 1   0
viewing Section fault
: fault'
[0]:   3 dim 1 offset 0   0
[0]:   4 dim 1 offset 1   0
[0]:   5 dim 1 offset 2   0
[0]:   7 dim 1 offset 3   1701409359
[0]:   8 dim 1 offset 4   1684370542
[0]:   9 dim 1 offset 5   1969309216
[0]:   10 dim 1 offset 6   1830843500
[0]:   11 dim 1 offset 7   6845285
[0]:   12 dim 1 offset 8   0
viewing UniformSection 'orientation'
[0]: empty
viewing GeneralSection 'Coordinates with shadow vertices'
  Fields: 0
[0]:   2 dim 3 offset 0   -1 0 0
[0]:   3 dim 3 offset 3   0 -1 0
[0]:   4 dim 3 offset 6   0 0 1
[0]:   5 dim 3 offset 9   0 1 0
[0]:   6 dim 3 offset 12   1 0 0
[0]:   7 dim 3 offset 15   0 -1 0
[0]:   8 dim 3 offset 18   0 -1 0
[0]:   9 dim 3 offset 21   0 0 1
[0]:   10 dim 3 offset 24   0 0 1
[0]:   11 dim 3 offset 27   0 1 0
[0]:   12 dim 3 offset 30   0 1 0
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/TimeDependent.py:97:preinitialize
 -- timedependent(info)
 -- Pre-initializing problem.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:94:preinitialize
 -- implicit(info)
 -- Pre-initializing materials.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/feassemble/FIATSimplex.py:138:initialize
 -- fiatsimplex(info)
 -- Cell geometry: 
 -- <pylith.feassemble.geometry.GeometryTet3D.GeometryTet3D object at 0xf6a61d2c>
 -- Vertices: 
 -- [[-1. -1. -1.]
 [ 1. -1. -1.]
 [-1.  1. -1.]
 [-1. -1.  1.]]
 -- Quad pts:
 -- [[-0.5 -0.5 -0.5]]
 -- Quad wts:
 -- [ 1.33333333]
 -- Basis fns @ quad pts ):
 -- [[ 0.25  0.25  0.25  0.25]]
 -- Basis fn derivatives @ quad pts:
 -- [[[ -5.00000000e-01  -5.00000000e-01  -5.00000000e-01]
  [  5.00000000e-01   2.06333521e-17   1.33917262e-17]
  [  0.00000000e+00   5.00000000e-01  -5.98578473e-19]
  [  0.00000000e+00   0.00000000e+00   5.00000000e-01]]]
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:107:preinitialize
 -- implicit(info)
 -- Added elasticity integrator for material 'Elastic material'.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:109:preinitialize
 -- implicit(info)
 -- Pre-initializing boundary conditions.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:123:preinitialize
 -- implicit(info)
 -- Added boundary condition 'end points' as a constraint.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:130:preinitialize
 -- implicit(info)
 -- Pre-initializing interior interfaces.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/faults/FaultCohesiveKin.py:73:preinitialize
 -- faultcohesivekin(info)
 -- Pre-initializing fault 'fault'.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/feassemble/FIATSimplex.py:138:initialize
 -- fiatsimplex(info)
 -- Cell geometry: 
 -- <pylith.feassemble.geometry.GeometryTri3D.GeometryTri3D object at 0xf5a3d0ec>
 -- Vertices: 
 -- [[-1. -1.]
 [ 1. -1.]
 [-1.  1.]]
 -- Quad pts:
 -- [[-0.33333333 -0.33333333]]
 -- Quad wts:
 -- [ 2.]
 -- Basis fns @ quad pts ):
 -- [[ 0.33333333  0.33333333  0.33333333]]
 -- Basis fn derivatives @ quad pts:
 -- [[[ -5.00000000e-01  -5.00000000e-01]
  [  5.00000000e-01   5.31286169e-17]
  [  0.00000000e+00   5.00000000e-01]]]
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:138:preinitialize
 -- implicit(info)
 -- Added interface condition 'fault' as an integrator.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/TimeDependent.py:113:verifyConfiguration
 -- timedependent(info)
 -- Verifying compatibility of problem configuration.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/TimeDependent.py:140:initialize
 -- timedependent(info)
 -- Initializing problem.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:181:initialize
 -- implicit(info)
 -- Initializing integrators.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/faults/FaultCohesiveKin.py:97:initialize
 -- faultcohesivekin(info)
 -- Initializing fault 'fault'.
viewing Sifter: 'Send overlap'
cap --> base:
[0]: empty
cap:
[0]:  [ ]
base:
[0]:  [ ]
viewing Sifter: 'Receive overlap'
cap --> base:
[0]: empty
cap:
[0]:  [ ]
base:
[0]:  [ ]
[0]Got new tag 2147483519
[0]Got new tag 2147483519
[0]Got new tag 2147483519
[0]Got new tag 2147483518
viewing Field 'Send Sizer in Completion'
viewing Field 'Receive Sizer in Completion'
viewing Field 'Send Section in Completion'
viewing Field 'Receive Section in Completion'
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:187:initialize
 -- implicit(info)
 -- Initializing constraints.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:192:initialize
 -- implicit(info)
 -- Setting up solution output.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:198:initialize
 -- implicit(info)
 -- Creating solution field.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Implicit.py:95:initialize
 -- implicit(info)
 -- Creating other fields.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Implicit.py:102:initialize
 -- implicit(info)
 -- Creating Jacobian matrix.
[0]Got new tag 2147483518
[0]: dnz[0]: 27 onz[0]: 0
[0]: dnz[1]: 27 onz[1]: 0
[0]: dnz[2]: 27 onz[2]: 0
[0]: dnz[3]: 27 onz[3]: 0
[0]: dnz[4]: 27 onz[4]: 0
[0]: dnz[5]: 27 onz[5]: 0
[0]: dnz[6]: 27 onz[6]: 0
[0]: dnz[7]: 27 onz[7]: 0
[0]: dnz[8]: 27 onz[8]: 0
[0]: dnz[9]: 27 onz[9]: 0
[0]: dnz[10]: 27 onz[10]: 0
[0]: dnz[11]: 27 onz[11]: 0
[0]: dnz[12]: 27 onz[12]: 0
[0]: dnz[13]: 27 onz[13]: 0
[0]: dnz[14]: 27 onz[14]: 0
[0]: dnz[15]: 27 onz[15]: 0
[0]: dnz[16]: 27 onz[16]: 0
[0]: dnz[17]: 27 onz[17]: 0
[0]: dnz[18]: 27 onz[18]: 0
[0]: dnz[19]: 27 onz[19]: 0
[0]: dnz[20]: 27 onz[20]: 0
[0]: dnz[21]: 27 onz[21]: 0
[0]: dnz[22]: 27 onz[22]: 0
[0]: dnz[23]: 27 onz[23]: 0
[0]: dnz[24]: 27 onz[24]: 0
[0]: dnz[25]: 27 onz[25]: 0
[0]: dnz[26]: 27 onz[26]: 0
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Implicit.py:106:initialize
 -- implicit(info)
 -- Initializing solver.
viewing UniformSection 'Global Order'
[0]:   2 dim 1   (0, 0)
[0]:   3 dim 1   (0, 3)
[0]:   4 dim 1   (3, 3)
[0]:   5 dim 1   (6, 3)
[0]:   6 dim 1   (9, 0)
[0]:   7 dim 1   (9, 3)
[0]:   8 dim 1   (12, 3)
[0]:   9 dim 1   (15, 3)
[0]:   10 dim 1   (18, 3)
[0]:   11 dim 1   (21, 3)
[0]:   12 dim 1   (24, 3)
[0] localIndex[0]: 3 globalIndex[0]: 0
[0] localIndex[1]: 4 globalIndex[1]: 1
[0] localIndex[2]: 5 globalIndex[2]: 2
[0] localIndex[3]: 6 globalIndex[3]: 3
[0] localIndex[4]: 7 globalIndex[4]: 4
[0] localIndex[5]: 8 globalIndex[5]: 5
[0] localIndex[6]: 9 globalIndex[6]: 6
[0] localIndex[7]: 10 globalIndex[7]: 7
[0] localIndex[8]: 11 globalIndex[8]: 8
[0] localIndex[9]: 15 globalIndex[9]: 9
[0] localIndex[10]: 16 globalIndex[10]: 10
[0] localIndex[11]: 17 globalIndex[11]: 11
[0] localIndex[12]: 18 globalIndex[12]: 12
[0] localIndex[13]: 19 globalIndex[13]: 13
[0] localIndex[14]: 20 globalIndex[14]: 14
[0] localIndex[15]: 21 globalIndex[15]: 15
[0] localIndex[16]: 22 globalIndex[16]: 16
[0] localIndex[17]: 23 globalIndex[17]: 17
[0] localIndex[18]: 24 globalIndex[18]: 18
[0] localIndex[19]: 25 globalIndex[19]: 19
[0] localIndex[20]: 26 globalIndex[20]: 20
[0] localIndex[21]: 27 globalIndex[21]: 21
[0] localIndex[22]: 28 globalIndex[22]: 22
[0] localIndex[23]: 29 globalIndex[23]: 23
[0] localIndex[24]: 30 globalIndex[24]: 24
[0] localIndex[25]: 31 globalIndex[25]: 25
[0] localIndex[26]: 32 globalIndex[26]: 26
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/TimeDependent.py:154:run
 -- timedependent(info)
 -- Solving problem.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:221:stableTimeStep
 -- implicit(info)
 -- WARNING: Formulation::stableTimeStep() not implemented.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/TimeDependent.py:162:run
 -- timedependent(info)
 -- Main time loop, current time is t=-1*s
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:221:stableTimeStep
 -- implicit(info)
 -- WARNING: Formulation::stableTimeStep() not implemented.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/TimeDependent.py:235:_prestep
 -- timedependent(info)
 -- Preparing to advance solution from time t=-1*s.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Implicit.py:136:prestep
 -- implicit(info)
 -- Setting constraints.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:300:_reformJacobian
 -- implicit(info)
 -- Reforming Jacobian of operator.
[0]index 0: 0
[0]index 1: 1
[0]index 2: 2
[0]index 0: 3
[0]index 1: 4
[0]index 2: 5
[0]index 0: 0
[0]index 1: 1
[0]index 2: 2
[0]index 3: 3
[0]index 4: 4
[0]index 5: 5
[0]index 6: 6
[0]index 7: 7
[0]index 8: 8
[0]index 0: 9
[0]index 1: 10
[0]index 2: 11
[0]index 3: 12
[0]index 4: 13
[0]index 5: 14
[0]index 6: 15
[0]index 7: 16
[0]index 8: 17
[0]index 0: 0
[0]index 0: 1
[0]index 0: 0
[0]index 1: 1
[0]index 2: 2
[0]index 3: 3
[0]index 4: 4
[0]index 5: 5
[0]index 6: 6
[0]index 7: 7
[0]index 8: 8
[0]index 9: 9
[0]index 10: 10
[0]index 11: 11
[0]index 0: 12
[0]index 1: 13
[0]index 2: 14
[0]index 3: 15
[0]index 4: 16
[0]index 5: 17
[0]index 6: 18
[0]index 7: 19
[0]index 8: 20
[0]index 9: 21
[0]index 10: 22
[0]index 11: 23
[0]index 0: 3
[0]index 1: 4
[0]index 2: 5
[0]index 3: 6
[0]index 4: 7
[0]index 5: 8
[0]index 6: 9
[0]index 7: 10
[0]index 8: 11
[0]index 9: -1
[0]index 10: -2
[0]index 11: -3
[0]index 0: 15
[0]index 1: 16
[0]index 2: 17
[0]index 3: 27
[0]index 4: 28
[0]index 5: 29
[0]index 6: 21
[0]index 7: 22
[0]index 8: 23
[0]index 9: -1
[0]index 10: -2
[0]index 11: -3
[0]mat for element 0
[0]mat indices[0] = 0
[0]mat indices[1] = 1
[0]mat indices[2] = 2
[0]mat indices[3] = 3
[0]mat indices[4] = 4
[0]mat indices[5] = 5
[0]mat indices[6] = 6
[0]mat indices[7] = 7
[0]mat indices[8] = 8
[0]mat indices[9] = -1
[0]mat indices[10] = -2
[0]mat indices[11] = -3
[0] 1.25e+10 -5e+09 -5e+09 -5e+09 0 5e+09 7.5e+09 9.53674e-07 -5e+09 -1.5e+10 5e+09 5e+09
[0] -5e+09 1.25e+10 5e+09 0 -5e+09 -5e+09 -9.53674e-07 -2.5e+09 9.53674e-07 5e+09 -5e+09 0
[0] -5e+09 5e+09 1.25e+10 5e+09 -5e+09 -1.5e+10 -5e+09 -9.53674e-07 7.5e+09 5e+09 0 -5e+09
[0] -5e+09 0 5e+09 1e+10 0 0 -5e+09 0 5e+09 0 0 -1e+10
[0] 0 -5e+09 -5e+09 0 1e+10 0 0 -5e+09 5e+09 0 0 0
[0] 5e+09 -5e+09 -1.5e+10 0 0 3e+10 5e+09 5e+09 -1.5e+10 -1e+10 0 0
[0] 7.5e+09 -9.53674e-07 -5e+09 -5e+09 0 5e+09 1.25e+10 5e+09 -5e+09 -1.5e+10 -5e+09 5e+09
[0] 9.53674e-07 -2.5e+09 -9.53674e-07 0 -5e+09 5e+09 5e+09 1.25e+10 -5e+09 -5e+09 -5e+09 0
[0] -5e+09 9.53674e-07 7.5e+09 5e+09 5e+09 -1.5e+10 -5e+09 -5e+09 1.25e+10 5e+09 0 -5e+09
[0] -1.5e+10 5e+09 5e+09 0 0 -1e+10 -1.5e+10 -5e+09 5e+09 3e+10 0 0
[0] 5e+09 -5e+09 0 0 0 0 -5e+09 -5e+09 0 0 1e+10 0
[0] 5e+09 0 -5e+09 -1e+10 0 0 5e+09 0 -5e+09 0 0 1e+10
[0]mat for element 1
[0]mat indices[0] = 9
[0]mat indices[1] = 10
[0]mat indices[2] = 11
[0]mat indices[3] = 21
[0]mat indices[4] = 22
[0]mat indices[5] = 23
[0]mat indices[6] = 15
[0]mat indices[7] = 16
[0]mat indices[8] = 17
[0]mat indices[9] = -1
[0]mat indices[10] = -2
[0]mat indices[11] = -3
[0] 1.25e+10 5e+09 5e+09 7.5e+09 -9.53674e-07 5e+09 -5e+09 0 -5e+09 -1.5e+10 -5e+09 -5e+09
[0] 5e+09 1.25e+10 5e+09 9.53674e-07 -2.5e+09 6.7614e-07 0 -5e+09 -5e+09 -5e+09 -5e+09 0
[0] 5e+09 5e+09 1.25e+10 5e+09 -1.23121e-06 7.5e+09 -5e+09 -5e+09 -1.5e+10 -5e+09 0 -5e+09
[0] 7.5e+09 9.53674e-07 5e+09 1.25e+10 -5e+09 5e+09 -5e+09 0 -5e+09 -1.5e+10 5e+09 -5e+09
[0] -9.53674e-07 -2.5e+09 -9.53674e-07 -5e+09 1.25e+10 -5e+09 0 -5e+09 5e+09 5e+09 -5e+09 0
[0] 5e+09 9.53674e-07 7.5e+09 5e+09 -5e+09 1.25e+10 -5e+09 5e+09 -1.5e+10 -5e+09 0 -5e+09
[0] -5e+09 0 -5e+09 -5e+09 0 -5e+09 1e+10 0 0 0 0 1e+10
[0] 0 -5e+09 -5e+09 0 -5e+09 5e+09 0 1e+10 0 0 0 0
[0] -5e+09 -5e+09 -1.5e+10 -5e+09 5e+09 -1.5e+10 0 0 3e+10 1e+10 0 0
[0] -1.5e+10 -5e+09 -5e+09 -1.5e+10 5e+09 -5e+09 0 0 1e+10 3e+10 0 0
[0] -5e+09 -5e+09 0 5e+09 -5e+09 0 0 0 0 0 1e+10 0
[0] -5e+09 0 -5e+09 -5e+09 0 -5e+09 1e+10 0 0 0 0 1e+10
[0]mat for element 13
[0]mat indices[0] = 3
[0]mat indices[1] = 4
[0]mat indices[2] = 5
[0]mat indices[3] = 0
[0]mat indices[4] = 1
[0]mat indices[5] = 2
[0]mat indices[6] = 6
[0]mat indices[7] = 7
[0]mat indices[8] = 8
[0]mat indices[9] = 15
[0]mat indices[10] = 16
[0]mat indices[11] = 17
[0]mat indices[12] = 9
[0]mat indices[13] = 10
[0]mat indices[14] = 11
[0]mat indices[15] = 21
[0]mat indices[16] = 22
[0]mat indices[17] = 23
[0]mat indices[18] = 18
[0]mat indices[19] = 19
[0]mat indices[20] = 20
[0]mat indices[21] = 12
[0]mat indices[22] = 13
[0]mat indices[23] = 14
[0]mat indices[24] = 24
[0]mat indices[25] = 25
[0]mat indices[26] = 26
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 -0 -3e+10 0 0 0 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -3e+10 -0 -0 0 0 0 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 -3e+10 -0 0 0 0 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 -0 -3e+10 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -3e+10 -0 -0 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 -3e+10 -0 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 -0 -3e+10
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -3e+10 -0 -0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0 -3e+10 -0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3e+10 0 0 0 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3e+10 0 0 0 0 0 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3e+10 0 0 0 0 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3e+10 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3e+10 0 0 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3e+10 0 0 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3e+10
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3e+10 0 0
[0] 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3e+10 0
[0] -0 -1 -0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
[0] -0 -0 -1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
[0] -1 -0 -0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
[0] 0 0 0 -0 -1 -0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
[0] 0 0 0 -0 -0 -1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
[0] 0 0 0 -1 -0 -0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
[0] 0 0 0 0 0 0 -0 -1 -0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
[0] 0 0 0 0 0 0 -0 -0 -1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
[0] 0 0 0 0 0 0 -1 -0 -0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/TimeDependent.py:244:_step
 -- timedependent(info)
 -- Advancing solution from t=-1*s to t=0*s.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Implicit.py:159:step
 -- implicit(info)
 -- Integrating residual term in operator.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Implicit.py:169:step
 -- implicit(info)
 -- Completing residual.
[0]Got new tag 2147483519
[0]Got new tag 2147483516
[0]Got new tag 2147483515
[0]Got new tag 2147483514
viewing Field 'Send Sizer in Completion'
viewing Field 'Receive Sizer in Completion'
viewing Field 'Send Section in Completion'
viewing Field 'Receive Section in Completion'
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Implicit.py:173:step
 -- implicit(info)
 -- Solving equations.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/solver/SolverLinear.py:68:solve
 -- solverlinear(info)
 -- Solving linear equations.
[0]PETSC ERROR: --------------------- Error Message ------------------------------------
[0]PETSC ERROR: Detected zero pivot in LU factorization
see http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html#ZeroPivot!
[0]PETSC ERROR: Zero pivot row 5 value 7.47386e-07 tolerance 0.15 * rowsum 1.5e+11!
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: Petsc Development Version 2.3.3, Patch 8, unknown HG revision: unknown
[0]PETSC ERROR: See docs/changes/index.html for recent updates.
[0]PETSC ERROR: See docs/faq.html for hints about trouble shooting.
[0]PETSC ERROR: See docs/index.html for manual pages.
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: /home/dicaprio/local/pylith-1.0.2-linux-i686/bin/mpinemesis on a linux-gnu named jokull.gps.caltech.edu by dicaprio Wed Dec  5 15:35:07 2007
[0]PETSC ERROR: Libraries linked from /home/buildbot/slave/build/x86_linux_single_nosched_binbot/PETSc/dev/binaries-175/lib
[0]PETSC ERROR: Configure run at Tue Dec  4 04:10:21 2007
[0]PETSC ERROR: Configure options --with-mpi-dir=/home/buildbot/install/x86_linux_single_nosched_binbot --with-debugging=no --with-sieve=1 --with-clanguage=C++ --with-mpi=1 --with-boost=1 --with-chaco=1 --download-boost=1 --download-chaco=1 --with-x=0 --with-shared=1 --CXXFLAGS=-DNEW_SECTION
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: MatLUFactorNumeric_Inode() line 1390 in src/mat/impls/aij/seq/inode.c
[0]PETSC ERROR: MatLUFactorNumeric() line 2276 in src/mat/interface/matrix.c
[0]PETSC ERROR: PCSetUp_ILU() line 564 in src/ksp/pc/impls/factor/ilu/ilu.c
[0]PETSC ERROR: PCSetUp() line 788 in src/ksp/pc/interface/precon.c
[0]PETSC ERROR: KSPSetUp() line 234 in src/ksp/ksp/interface/itfunc.c
[0]PETSC ERROR: PCSetUpOnBlocks_ASM() line 224 in src/ksp/pc/impls/asm/asm.c
[0]PETSC ERROR: PCSetUpOnBlocks() line 821 in src/ksp/pc/interface/precon.c
[0]PETSC ERROR: KSPSetUpOnBlocks() line 158 in src/ksp/ksp/interface/itfunc.c
[0]PETSC ERROR: KSPSolve() line 347 in src/ksp/ksp/interface/itfunc.c
[0]PETSC ERROR: preallocateOperator() line 190 in unknowndirectory/solver_embed.cpp
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/TimeDependent.py:253:_poststep
 -- timedependent(info)
 -- Finishing advancing solution to t=0*s.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Implicit.py:197:poststep
 -- implicit(info)
 -- Updating integrators states.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:250:poststep
 -- implicit(info)
 -- Writing solution field.
Creating new ParallelFactory
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/problems/Formulation.py:267:finalize
 -- implicit(info)
 -- Formulation finalize.
 >> /home/buildbot/install/x86_linux_single_nosched_binbot/lib/python2.5/site-packages/pylith/utils/PetscManager.py:63:finalize
 -- petsc(info)
 -- Finalizing PETSc.