checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for g++... g++ checking for C++ compiler default output file name... a.out checking whether the C++ compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for style of include used by make... GNU checking dependency style of g++... gcc3 checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking dependency style of gcc... gcc3 checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for /usr/bin/ld option to reload object files... -r checking for BSD-compatible nm... /usr/bin/nm -B checking whether ln -s works... yes checking how to recognize dependent libraries... pass_all checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking how to run the C++ preprocessor... g++ -E checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... pgf77 checking whether we are using the GNU Fortran 77 compiler... no checking whether pgf77 accepts -g... yes checking the maximum length of command line arguments... 98304 checking command to parse /usr/bin/nm -B output from gcc object... ok checking for objdir... .libs checking for ar... ar checking for ranlib... ranlib checking for strip... strip checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC checking if gcc PIC flag -fPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no configure: creating libtool appending configuration tag "CXX" to libtool checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC checking if g++ PIC flag -fPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so (cached) (cached) checking how to hardcode library paths into programs... immediate appending configuration tag "F77" to libtool checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for pgf77 option to produce PIC... -fPIC checking if pgf77 PIC flag -fPIC works... yes checking if pgf77 static flag -static works... no checking if pgf77 supports -c -o file.o... yes checking whether the pgf77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so (cached) (cached) checking how to hardcode library paths into programs... immediate checking for a BSD-compatible install... /usr/bin/install -c checking for nemesis... /project/nemsha/a/tabrez/pylith/bin/nemesis checking whether /project/nemsha/a/tabrez/pylith/bin/nemesis version >= 2.3... yes checking for /project/nemsha/a/tabrez/pylith/bin/nemesis version... 2.4 checking for /project/nemsha/a/tabrez/pylith/bin/nemesis platform... linux2 checking for /project/nemsha/a/tabrez/pylith/bin/nemesis script directory... ${prefix}/lib/python2.4/site-packages checking for /project/nemsha/a/tabrez/pylith/bin/nemesis extension module directory... ${exec_prefix}/lib64/python2.4/site-packages checking /project/nemsha/a/tabrez/pylith/bin/nemesis sysconfig... ok checking for PETSc dir... /project/nemsha/a/tabrez/petsc-dev checking for PETSc arch... linux-gnu-cxx-opt checking for PETSc config... /project/nemsha/a/tabrez/petsc-dev/linux-gnu-cxx-opt/conf/petscvariables checking for PETSc version == 3.0.0... yes checking for PetscInitialize... yes (C++) checking for petsc.h... yes checking whether we can link a trivial C++ PETSc program... yes checking for PetscInitialize... yes (C++) checking for PETSc/Sieve... yes configure: downloading missing Python dependencies configure: building Python dependencies checking for egg-related flags... ok checking for numpy python module... found checking for numpy include directory... /project/nemsha/a/tabrez/pylith/lib64/python2.4/site-packages/numpy/core/include checking for swig... /project/nemsha/a/tabrez/pylith/bin/swig checking for SWIG version... 1.3.39 configure: SWIG executable is '/project/nemsha/a/tabrez/pylith/bin/swig' configure: SWIG library directory is '/project/nemsha/a/tabrez/pylith/share/swig/1.3.39' checking netcdfcpp.h usability... yes checking netcdfcpp.h presence... yes checking for netcdfcpp.h... yes checking for NcFile in -lnetcdfc++... yes checking for pj_init_plus in -lproj... yes checking proj_api.h usability... yes checking proj_api.h presence... yes checking for proj_api.h... yes checking spatialdata/spatialdb/SpatialDB.hh usability... yes checking spatialdata/spatialdb/SpatialDB.hh presence... yes checking for spatialdata/spatialdb/SpatialDB.hh... yes checking for spatialdb::SimpleDB in -lspatialdata... yes checking whether C++ compiler defines __PRETTY_FUNCTION__... yes checking whether byte ordering is bigendian... no configure: creating ./config.status config.status: creating Makefile config.status: creating pylith/Makefile config.status: creating libsrc/Makefile config.status: creating libsrc/bc/Makefile config.status: creating libsrc/feassemble/Makefile config.status: creating libsrc/faults/Makefile config.status: creating libsrc/materials/Makefile config.status: creating libsrc/meshio/Makefile config.status: creating libsrc/problems/Makefile config.status: creating libsrc/topology/Makefile config.status: creating libsrc/utils/Makefile config.status: creating modulesrc/Makefile config.status: creating modulesrc/include/Makefile config.status: creating modulesrc/bc/Makefile config.status: creating modulesrc/faults/Makefile config.status: creating modulesrc/feassemble/Makefile config.status: creating modulesrc/materials/Makefile config.status: creating modulesrc/meshio/Makefile config.status: creating modulesrc/mpi/Makefile config.status: creating modulesrc/problems/Makefile config.status: creating modulesrc/topology/Makefile config.status: creating modulesrc/utils/Makefile config.status: creating applications/Makefile config.status: creating applications/utilities/Makefile config.status: creating unittests/Makefile config.status: creating unittests/libtests/Makefile config.status: creating unittests/libtests/bc/Makefile config.status: creating unittests/libtests/bc/data/Makefile config.status: creating unittests/libtests/faults/Makefile config.status: creating unittests/libtests/faults/data/Makefile config.status: creating unittests/libtests/feassemble/Makefile config.status: creating unittests/libtests/feassemble/data/Makefile config.status: creating unittests/libtests/materials/Makefile config.status: creating unittests/libtests/materials/data/Makefile config.status: creating unittests/libtests/meshio/Makefile config.status: creating unittests/libtests/meshio/data/Makefile config.status: creating unittests/libtests/topology/Makefile config.status: creating unittests/libtests/topology/data/Makefile config.status: creating unittests/libtests/utils/Makefile config.status: creating unittests/pytests/Makefile config.status: creating unittests/pytests/bc/Makefile config.status: creating unittests/pytests/bc/data/Makefile config.status: creating unittests/pytests/faults/Makefile config.status: creating unittests/pytests/faults/data/Makefile config.status: creating unittests/pytests/feassemble/Makefile config.status: creating unittests/pytests/feassemble/data/Makefile config.status: creating unittests/pytests/materials/Makefile config.status: creating unittests/pytests/materials/data/Makefile config.status: creating unittests/pytests/meshio/Makefile config.status: creating unittests/pytests/meshio/data/Makefile config.status: creating unittests/pytests/mpi/Makefile config.status: creating unittests/pytests/problems/Makefile config.status: creating unittests/pytests/problems/data/Makefile config.status: creating unittests/pytests/topology/Makefile config.status: creating unittests/pytests/topology/data/Makefile config.status: creating unittests/pytests/utils/Makefile config.status: creating tests/Makefile config.status: creating tests/1d/Makefile config.status: creating tests/1d/line2/Makefile config.status: creating tests/1d/line3/Makefile config.status: creating tests/2d/Makefile config.status: creating tests/2d/tri3/Makefile config.status: creating tests/2d/quad4/Makefile config.status: creating doc/Makefile config.status: creating doc/developer/Makefile config.status: creating doc/install/Makefile config.status: creating doc/refguide/Makefile config.status: creating doc/releasenotes/Makefile config.status: creating doc/userguide/Makefile config.status: creating doc/presentations/Makefile config.status: creating examples/Makefile config.status: creating examples/3d/Makefile config.status: creating examples/bar_shearwave/Makefile config.status: creating examples/twocells/Makefile config.status: creating examples/3d/tet4/Makefile config.status: creating examples/3d/hex8/Makefile config.status: creating examples/bar_shearwave/hex8/Makefile config.status: creating examples/bar_shearwave/hex8/output/Makefile config.status: creating examples/bar_shearwave/quad4/Makefile config.status: creating examples/bar_shearwave/quad4/output/Makefile config.status: creating examples/bar_shearwave/tet4/Makefile config.status: creating examples/bar_shearwave/tet4/output/Makefile config.status: creating examples/bar_shearwave/tri3/Makefile config.status: creating examples/bar_shearwave/tri3/output/Makefile config.status: creating examples/greensfns/Makefile config.status: creating examples/greensfns/hex8/Makefile config.status: creating examples/greensfns/hex8/gfimpulses/Makefile config.status: creating examples/greensfns/hex8/gfresponses/Makefile config.status: creating examples/twocells/twohex8/Makefile config.status: creating examples/twocells/twoquad4/Makefile config.status: creating examples/twocells/twotet4/Makefile config.status: creating examples/twocells/twotet4-geoproj/Makefile config.status: creating examples/twocells/twotri3/Makefile config.status: creating templates/Makefile config.status: error: cannot find input file: templates/materials/Makefile.in [stali@nemsha pylith-1.4.0]$