(view as text)
==========================================
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==========================================
On Thu Feb 9 06:12:46 PST 2012 on kale.geodynamics.org
Machine characteristics: Linux kale.geodynamics.org 2.6.18-274.3.1.el5 #1 SMP Tue Sep 6 20:13:52 EDT 2011 x86_64 x86_64 x86_64 GNU/Linux
-----------------------------------------
Using PETSc directory: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries
Using PETSc arch: pylith-linux-gnu-cxx-opt
-----------------------------------------
PETSC_VERSION_RELEASE 0
PETSC_VERSION_MAJOR 3
PETSC_VERSION_MINOR 2
PETSC_VERSION_SUBMINOR 0
PETSC_VERSION_PATCH 6
PETSC_VERSION_DATE "Sep, 8, 2011"
PETSC_VERSION_PATCH_DATE "unknown"
PETSC_VERSION_HG "unknown"
PETSC_VERSION_DATE_HG "unknown"
PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \
-----------------------------------------
Using configure Options: --prefix=/home/buildbot/install/pylith_centos_x86_64_binbot --download-f-blas-lapack=1 --with-sieve=1 --with-c2html=0 --CXXFLAGS=-DMPICH_IGNORE_CXX_SEEK --with-clanguage=C++ --with-mpicompilers=1 --with-debugging=0 --download-chaco=1 --download-boost=1 --download-ml=1 --with-hdf5=1 --with-hdf5-dir=/home/buildbot/install/pylith_centos_x86_64_binbot --with-x=0 --with-shared-libraries=1
Using configuration flags:
#define INCLUDED_PETSCCONF_H
#define IS_COLORING_MAX 65535
#define STDC_HEADERS 1
#define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT
#define PETSC_UINTPTR_T uintptr_t
#define PETSC_HAVE_PTHREAD 1
#define PETSC_STATIC_INLINE static inline
#define PETSC_REPLACE_DIR_SEPARATOR '\\'
#define PETSC_HAVE_HDF5 1
#define PETSC_RESTRICT __restrict__
#define PETSC_HAVE_SO_REUSEADDR 1
#define PETSC_HAVE_MPI 1
#define PETSC_PREFETCH_HINT_T2 _MM_HINT_T2
#define PETSC_PREFETCH_HINT_T0 _MM_HINT_T0
#define PETSC_PREFETCH_HINT_T1 _MM_HINT_T1
#define PETSC_HAVE_FORTRAN 1
#define PETSC_HAVE_CHACO 1
#define PETSC_LIB_DIR "/home/buildbot/install/pylith_centos_x86_64_binbot/lib"
#define PETSC_USE_SOCKET_VIEWER 1
#define PETSC_HAVE_BOOST 1
#define PETSC__POSIX_C_SOURCE_200112L 1
#define PETSC_SLSUFFIX "so"
#define PETSC_FUNCTION_NAME_CXX __func__
#define PETSC_HAVE_ATOLL 1
#define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1
#define PETSC_UNUSED __attribute((unused))
#define PETSC_FUNCTION_NAME_C __func__
#define PETSC_USE_SINGLE_LIBRARY 1
#define PETSC_HAVE_BUILTIN_EXPECT 1
#define PETSC_DIR_SEPARATOR '/'
#define PETSC_HAVE_ML 1
#define PETSC_PATH_SEPARATOR ':'
#define PETSC_HAVE_SIEVE 1
#define PETSC__BSD_SOURCE 1
#define PETSC_HAVE_XMMINTRIN_H 1
#define PETSC_PREFETCH_HINT_NTA _MM_HINT_NTA
#define PETSC_Prefetch(a,b,c) _mm_prefetch((const char*)(a),(c))
#define PETSC_HAVE_BLASLAPACK 1
#define PETSC_HAVE_STRING_H 1
#define PETSC_HAVE_SYS_TYPES_H 1
#define PETSC_HAVE_ENDIAN_H 1
#define PETSC_HAVE_SYS_PROCFS_H 1
#define PETSC_HAVE_DLFCN_H 1
#define PETSC_HAVE_SCHED_H 1
#define PETSC_HAVE_STDINT_H 1
#define PETSC_HAVE_LINUX_KERNEL_H 1
#define PETSC_HAVE_TIME_H 1
#define PETSC_HAVE_MATH_H 1
#define PETSC_TIME_WITH_SYS_TIME 1
#define PETSC_HAVE_SYS_PARAM_H 1
#define PETSC_HAVE_SYS_SOCKET_H 1
#define PETSC_HAVE_UNISTD_H 1
#define PETSC_HAVE_STDLIB_H 1
#define PETSC_HAVE_SYS_WAIT_H 1
#define PETSC_HAVE_LIMITS_H 1
#define PETSC_HAVE_SYS_UTSNAME_H 1
#define PETSC_HAVE_NETINET_IN_H 1
#define PETSC_HAVE_FENV_H 1
#define PETSC_HAVE_PTHREAD_H 1
#define PETSC_HAVE_FLOAT_H 1
#define PETSC_HAVE_SEARCH_H 1
#define PETSC_HAVE_SYS_RESOURCE_H 1
#define PETSC_HAVE_SYS_TIMES_H 1
#define PETSC_HAVE_NETDB_H 1
#define PETSC_HAVE_MALLOC_H 1
#define PETSC_HAVE_PWD_H 1
#define PETSC_HAVE_FCNTL_H 1
#define PETSC_HAVE_STRINGS_H 1
#define PETSC_HAVE_MEMORY_H 1
#define PETSC_HAVE_SYS_SYSINFO_H 1
#define PETSC_HAVE_SYS_TIME_H 1
#define PETSC_USING_F90 1
#define PETSC_HAVE_RTLD_NOW 1
#define PETSC_HAVE_RTLD_LOCAL 1
#define PETSC_HAVE_RTLD_LAZY 1
#define PETSC_C_STATIC_INLINE static inline
#define PETSC_HAVE_FORTRAN_UNDERSCORE 1
#define PETSC_HAVE_CXX_NAMESPACE 1
#define PETSC_HAVE_RTLD_GLOBAL 1
#define PETSC_C_RESTRICT __restrict__
#define PETSC_CXX_RESTRICT __restrict__
#define PETSC_CXX_STATIC_INLINE static inline
#define PETSC_HAVE_LIBMPL 1
#define PETSC_HAVE_LIBZ 1
#define PETSC_HAVE_LIBML 1
#define PETSC_HAVE_LIBDL 1
#define PETSC_HAVE_LIBM 1
#define PETSC_HAVE_LIBPTHREAD 1
#define PETSC_HAVE_LIBGFORTRAN 1
#define PETSC_HAVE_LIBMPICHF90 1
#define PETSC_HAVE_LIBGCC_S 1
#define PETSC_HAVE_LIBHDF5 1
#define PETSC_HAVE_LIBFLAPACK 1
#define PETSC_HAVE_ERF 1
#define PETSC_HAVE_LIBFBLAS 1
#define PETSC_HAVE_LIBHDF5_FORTRAN 1
#define PETSC_HAVE_LIBCHACO 1
#define PETSC_HAVE_LIBRT 1
#define PETSC_HAVE_LIBMPICH 1
#define PETSC_HAVE_LIBOPA 1
#define PETSC_ARCH "pylith-linux-gnu-cxx-opt"
#define PETSC_VERSION_DATE_HG "Wed Feb 08 17:37:31 2012 -0600"
#define PETSC_VERSION_BS_HG "c0a11d28270119c03bb00153ed87ca84ba2c0279"
#define PETSC_VERSION_HG "f7cef9644b64612473282b091d00a90d10304349"
#define PETSC_DIR "/home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries"
#define PETSC_VERSION_BS_DATE_HG "Thu Feb 02 15:29:29 2012 -0600"
#define HAVE_GZIP 1
#define PETSC_CLANGUAGE_CXX 1
#define PETSC_USE_ERRORCHECKING 1
#define PETSC_MISSING_DREAL 1
#define PETSC_SIZEOF_MPI_COMM 4
#define PETSC_BITS_PER_BYTE 8
#define PETSC_SIZEOF_MPI_FINT 4
#define PETSC_SIZEOF_VOID_P 8
#define PETSC_RETSIGTYPE void
#define PETSC_HAVE_CXX_COMPLEX 1
#define PETSC_SIZEOF_LONG 8
#define PETSC_USE_FORTRANKIND 1
#define PETSC_SIZEOF_SIZE_T 8
#define PETSC_SIZEOF_CHAR 1
#define PETSC_SIZEOF_DOUBLE 8
#define PETSC_SIZEOF_FLOAT 4
#define PETSC_HAVE_C99_COMPLEX 1
#define PETSC_SIZEOF_INT 4
#define PETSC_SIZEOF_LONG_LONG 8
#define PETSC_SIZEOF_SHORT 2
#define PETSC_HAVE_STRCASECMP 1
#define PETSC_HAVE_POPEN 1
#define PETSC_HAVE_SIGSET 1
#define PETSC_HAVE_GETWD 1
#define PETSC_HAVE_VSNPRINTF 1
#define PETSC_HAVE_TIMES 1
#define PETSC_HAVE_DLSYM 1
#define PETSC_HAVE_SNPRINTF 1
#define PETSC_HAVE_GETPWUID 1
#define PETSC_HAVE_GETHOSTBYNAME 1
#define PETSC_HAVE_SLEEP 1
#define PETSC_HAVE_DLERROR 1
#define PETSC_HAVE_FORK 1
#define PETSC_HAVE_RAND 1
#define PETSC_HAVE_GETTIMEOFDAY 1
#define PETSC_HAVE_DLCLOSE 1
#define PETSC_HAVE_UNAME 1
#define PETSC_HAVE_GETHOSTNAME 1
#define PETSC_HAVE_MKSTEMP 1
#define PETSC_HAVE_SIGACTION 1
#define PETSC_HAVE_DRAND48 1
#define PETSC_HAVE_MEMALIGN 1
#define PETSC_HAVE_VA_COPY 1
#define PETSC_HAVE_CLOCK 1
#define PETSC_HAVE_ACCESS 1
#define PETSC_HAVE_SIGNAL 1
#define PETSC_HAVE_USLEEP 1
#define PETSC_HAVE_GETRUSAGE 1
#define PETSC_HAVE_VFPRINTF 1
#define PETSC_HAVE_NANOSLEEP 1
#define PETSC_HAVE_GETDOMAINNAME 1
#define PETSC_HAVE_TIME 1
#define PETSC_HAVE_LSEEK 1
#define PETSC_HAVE_SOCKET 1
#define PETSC_HAVE_SYSINFO 1
#define PETSC_HAVE_READLINK 1
#define PETSC_HAVE_REALPATH 1
#define PETSC_HAVE_DLOPEN 1
#define PETSC_HAVE_MEMMOVE 1
#define PETSC_HAVE__GFORTRAN_IARGC 1
#define PETSC_SIGNAL_CAST
#define PETSC_HAVE_GETCWD 1
#define PETSC_HAVE_VPRINTF 1
#define PETSC_HAVE_BZERO 1
#define PETSC_HAVE_GETPAGESIZE 1
#define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1
#define PETSC_HAVE_GFORTRAN_IARGC 1
#define PETSC_MEMALIGN 16
#define PETSC_LEVEL1_DCACHE_LINESIZE 64
#define PETSC_LEVEL1_DCACHE_SIZE 65536
#define PETSC_LEVEL1_DCACHE_ASSOC 2
#define PETSC_USE_PROC_FOR_SIZE 1
#define PETSC_USE_SCALAR_REAL 1
#define PETSC_HAVE_ISINF 1
#define PETSC_HAVE_ISNAN 1
#define PETSC_USE_REAL_DOUBLE 1
#define PETSC_HAVE_MPI_COMM_C2F 1
#define PETSC_HAVE_MPI_LONG_DOUBLE 1
#define PETSC_HAVE_MPI_COMM_F2C 1
#define PETSC_HAVE_MPI_FINT 1
#define PETSC_HAVE_MPI_F90MODULE 1
#define PETSC_HAVE_MPI_FINALIZED 1
#define PETSC_HAVE_MPI_COMM_SPAWN 1
#define PETSC_HAVE_MPI_WIN_CREATE 1
#define PETSC_HAVE_MPI_EXSCAN 1
#define PETSC_HAVE_MPIIO 1
#define PETSC_HAVE_MPI_ALLTOALLW 1
#define PETSC_HAVE_MPI_IN_PLACE 1
#define PETSC_USE_INFO 1
#define PETSC_PETSC_USE_BACKWARD_LOOP 1
#define PETSC_Alignx(a,b)
#define PETSC_USE_LOG 1
#define PETSC_IS_COLOR_VALUE_TYPE short
#define PETSC_USE_CTABLE 1
#define PETSC_HAVE_DYNAMIC_LIBRARIES 1
#define PETSC_HAVE_SHARED_LIBRARIES 1
#define PETSC_USE_SHARED_LIBRARIES 1
#define PETSC_HAVE_SCHED_CPU_SET_T 1
#define PETSC_HAVE_PTHREAD_BARRIER_T 1
#define PETSC_HAVE_SYS_SYSCTL_H 1
#define PETSC_BLASLAPACK_UNDERSCORE 1
#define PETSC_OPT_SIEVE 1
#define PETSC_MESH_TYPE ALE::IMesh<PetscInt, PetscScalar>
#define PETSC_HAVE_H5PSET_FAPL_MPIO 1
-----------------------------------------
Using C/C++ include paths: -I/home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/include -I/home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/include -I/home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/include/sieve -I/home/buildbot/install/pylith_centos_x86_64_binbot/include
Using C/C++ compiler: mpicxx -DMPICH_IGNORE_CXX_SEEK -O -fPIC
Using Fortran include/module paths: -I/home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/include -I/home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/include -I/home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/include/sieve -I/home/buildbot/install/pylith_centos_x86_64_binbot/include
Using Fortran compiler: mpif90 -fPIC -Wall -Wno-unused-variable -Wno-line-truncation -O
-----------------------------------------
Using C/C++ linker: mpicxx
Using C/C++ flags: -DMPICH_IGNORE_CXX_SEEK -O
Using Fortran linker: mpif90
Using Fortran flags: -fPIC -Wall -Wno-unused-variable -Wno-line-truncation -O
-----------------------------------------
Using libraries: -Wl,-rpath,/home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/lib -L/home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/lib -lpetsc -lpthread -Wl,-rpath,/home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/lib -lml -lchaco -lflapack -lfblas -Wl,-rpath,/home/buildbot/install/pylith_centos_x86_64_binbot/lib -L/home/buildbot/install/pylith_centos_x86_64_binbot/lib -lhdf5_fortran -lhdf5 -lz -lm -Wl,-rpath,/home/buildbot/install/pylith_centos_x86_64_binbot/lib/gcc/x86_64-unknown-linux-gnu/4.5.2 -L/home/buildbot/install/pylith_centos_x86_64_binbot/lib/gcc/x86_64-unknown-linux-gnu/4.5.2 -Wl,-rpath,/home/buildbot/install/pylith_centos_x86_64_binbot/lib64 -L/home/buildbot/install/pylith_centos_x86_64_binbot/lib64 -ldl -lmpich -lopa -lmpl -lrt -lpthread -lgcc_s -lmpichf90 -lgfortran -lm -lm -lmpichcxx -lstdc++ -ldl -lmpich -lopa -lmpl -lrt -lpthread -lgcc_s -ldl
------------------------------------------
Using mpiexec: /home/buildbot/install/pylith_centos_x86_64_binbot/bin/mpiexec
==========================================
/home/buildbot/buildbot/bin/rm -f -rf /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/lib/libpetsc*.*
/home/buildbot/buildbot/bin/rm -f -f /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/include/petsc*.mod
BEGINNING TO COMPILE LIBRARIES IN ALL DIRECTORIES
=========================================
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/inline
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/comm
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/socket
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/socket/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/ascii
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/ascii/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/ascii/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/binary
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/binary/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/binary/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/binary/f90-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/string
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/string/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/draw
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/draw/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/draw/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/vu
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/hdf5
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/hdf5/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/impls/vtk
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/examples
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/examples/tutorials
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/examples/tests
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/interface
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/interface/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/viewer/interface/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw/interface
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw/interface/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw/interface/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw/impls
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw/examples
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw/examples/tests
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw/examples/tutorials
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw/utils
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw/utils/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/draw/utils/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/error
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/error/examples
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/error/examples/tests
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/error/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/error/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/dll
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/dll/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/fileio
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/fileio/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/fileio/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/memory
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/memory/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/memory/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/objects
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/objects/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/objects/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/time
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/time/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/utils
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/utils/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/utils/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/plog
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/plog/utils
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/sys/plog/ftn-auto
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libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/mat/utils
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libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/mat/utils/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/mat/matfd
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/mat/matfd/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/mat/matfd/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/mat/partition
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/mat/partition/impls
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/mat/partition/impls/chaco
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/mat/partition/impls/chaco/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/mat/partition/ftn-auto
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libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/ao/interface
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/ao/interface/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/ao/interface/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/ao/impls
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/ao/impls/basic
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/ao/impls/basic/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/ao/impls/mapping
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/ao/impls/mapping/ftn-auto
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libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/ao/impls/memscalable
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libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/da
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libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/da/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/da/f90-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/adda
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/adda/examples
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/adda/examples/tests
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/adda/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/sliced
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/composite
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/composite/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/composite/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/composite/f90-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/mesh
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/mesh/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/mesh/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/mesh/f90-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/cartesian
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/cartesian/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/iga
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/iga/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/redundant
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/redundant/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/complex
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/impls/complex/ftn-auto
complexf.c:125:48: error: expected initializer before ‘dmcomplexsetcone_’
/usr/bin/ar: complexf.o: No such file or directory
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/f90-mod
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/interface
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/interface/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/interface/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/examples
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/examples/tests
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/dm/examples/tutorials
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/interface
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/interface/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/interface/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/jacobi
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/jacobi/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/none
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/sor
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/sor/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/shell
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/shell/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/shell/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/bjacobi
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/bjacobi/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/bjacobi/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/mg
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/mg/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/mg/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/eisens
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/eisens/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/asm
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/asm/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/asm/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/ksp
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/ksp/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/composite
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/composite/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/composite/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/redundant
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/redundant/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/is
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/is/nn
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/pbjacobi
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/ml
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/mat
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/tfs
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/fieldsplit
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/fieldsplit/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/factor
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/factor/lu
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/factor/ilu
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/factor/icc
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/factor/cholesky
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/factor/cholesky/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/factor/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/factor/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/galerkin
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/galerkin/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/openmp
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/supportgraph
In file included from /home/buildbot/install/pylith_centos_x86_64_binbot/lib/gcc/x86_64-unknown-linux-gnu/4.5.2/../../../../include/c++/4.5.2/backward/hash_set:60:0,
from /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/include/boost/pending/container_traits.hpp:23,
from /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/include/boost/graph/detail/adjacency_list.hpp:31,
from /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/include/boost/graph/adjacency_list.hpp:324,
from lowstretch.cpp:6:
/home/buildbot/install/pylith_centos_x86_64_binbot/lib/gcc/x86_64-unknown-linux-gnu/4.5.2/../../../../include/c++/4.5.2/backward/backward_warning.h:28:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated.
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/asa
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/cp
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/wb
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/wb/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/python
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/python/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/lsc
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/redistribute
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/redistribute/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/gasm
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/gasm/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/svd
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/gamg
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/impls/gamg/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/examples
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/examples/tests
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/pc/examples/tutorials
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/ksp
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/ksp/interface
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/ksp/interface/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/ksp/interface/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/ksp/interface/f90-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/ksp/impls
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/ksp/impls/cr
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/ksp/impls/bcgs
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/src/ksp/ksp/impls/bcgsl
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libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/include/finclude/ftn-auto
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/include/finclude/ftn-custom
libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/include/private
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libfast in: /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/tutorials/multiphysics
Completed building libraries
=========================================
making shared libraries in /home/buildbot/slave/build/pylith_centos_x86_64_binbot/PETSc/dev/binaries/pylith-linux-gnu-cxx-opt/lib
building libpetsc.so
=========================================
********************************************************************
Error during compile, check pylith-linux-gnu-cxx-opt/conf/make.log
Send it and pylith-linux-gnu-cxx-opt/conf/configure.log to petsc-maint@mcs.anl.gov
********************************************************************
make: [all] Error 1 (ignored)