[aspect-devel] Aspect problem on stampede cluster

[Timo Heister]

Does "make test" in your deal.II build directory work? Can you test if
examples/step-40 works?

On Mon, Feb 29, 2016 at 1:02 PM, Robert Martin-Short
<rmartin-short at berkeley.edu> wrote:
> Dear aspect development team
>
> I'm running ASPECT 1.3 on the TACC stampede cluster via and XSEDE
> allocation, but am encountering some problems when running parallel
> simulations
>
> My runs always fail with errors that look like this
>
> c492-604.stampede.tacc.utexas.edu:mpispawn_0][child_handler] MPI process
> (rank: 7, pid: 103496) terminated with signal 9 -> abort job
> [c492-604.stampede.tacc.utexas.edu:mpispawn_0][readline] Unexpected
> End-Of-File on file descriptor 14. MPI process died?
> [c492-604.stampede.tacc.utexas.edu:mpispawn_0][mtpmi_processops] Error while
> reading PMI socket. MPI process died?
> [c492-604.stampede.tacc.utexas.edu:mpirun_rsh][process_mpispawn_connection]
> mpispawn_0 from node c492-604 aborted: MPI process error (1)
> TACC: MPI job exited with code: 1
>
> I'm running parameter files that are known to work on another cluster, and
> the simulation will proceed if run in serial on Stampede, so this seems like
> an MPI problem? Perhaps I just don't have the correct modules loaded?
>
> Here is a list of my loaded module files:
>
>   1) xalt/0.6   2) TACC   3) git/2.7.0   4) gcc/4.7.1   5) mvapich2/1.9a2
> 6) mkl/13.0.2.146   7) cmake/3.1.0--
>
> If anyone has seen this problem before and could give me some advice, that
> would be great!
>
> Best wishes
>
> Robert
>
> Robert Martin-Short
> Graduate Student
> Department of Earth and Planetary Science
> U.C Berkeley
>
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-- 
Timo Heister
http://www.math.clemson.edu/~heister/