[aspect-devel] compilation error
Timo Heister
heister at clemson.edu
Thu Nov 3 05:19:48 PDT 2016
Lev, John,
this is a bug in ASPECT when compiling with an old compiler without
c++11 support. We will get this fixed as soon as possible.
On Thu, Nov 3, 2016 at 2:35 AM, John Naliboff <jbnaliboff at ucdavis.edu> wrote:
> Hi Lev,
>
> Does dealii example-32 compile with your latest dealii update? That is a
> good indicator to see if the problem lies directly with the dealii
> installation, independent of ASPECT.
>
> Cheers,
> John
>
> *************************************************
> John Naliboff
> Assistant Project Scientist, CIG
> Earth & Planetary Sciences Dept., UC Davis
>
>
>
> On Nov 2, 2016, at 9:36 AM, Lev Karatun <lev.karatun at gmail.com> wrote:
>
> Hi John,
>
> I'm using the latest version of dealII (commit 0e395a1 - 16 hours ago),
> updated it just before updating aspect. Trilinos version is 11.12.1. I
> donwnloaded aspect into a separate empty directory, it doesn't compile from
> there.
>
> Best regards,
> Lev Karatun.
>
> 2016-11-02 12:00 GMT-04:00 John Naliboff <jbnaliboff at ucdavis.edu>:
>>
>> Hi Lev,
>>
>> What Trilinos and dealii version are you using? If you are using the
>> development version of dealii, when was the last update? Also, did you do
>> 'make distclean' before reconfiguring and compiling ASPECT? I'm not sure
>> what the error below is related to, but the aforementioned information is
>> always helpful when debugging an installation issue.
>>
>> Cheers,
>> John
>>
>>
>> *************************************************
>> John Naliboff
>> Assistant Project Scientist, CIG
>> Earth & Planetary Sciences Dept., UC Davis
>>
>> On 11/02/2016 06:45 AM, Lev Karatun wrote:
>>
>> Hi,
>>
>> I was trying to update Aspect to the latest version and got the following
>> error:
>>
>> [ 0%] Building CXX object
>> CMakeFiles/aspect.dir/source/simulator/core.cc.o
>> In file included from
>> /home/lev/aspect/aspect_debug/include/aspect/simulator.h:30,
>> from
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc:22:
>> /home/lev/aspect/dealii_debug/include/deal.II/lac/trilinos_block_vector.h:
>> In member function ‘void std::vector<_Tp, _Alloc>::resize(size_t, _Tp) [with
>> _Tp = dealii::TrilinosWrappers::Vector, _Alloc =
>> std::allocator<dealii::TrilinosWrappers::Vector>]’:
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/lac/trilinos_block_vector.h:399:
>> warning: ‘dealii::TrilinosWrappers::Vector::Vector()’ is deprecated
>> (declared at
>> /home/lev/aspect/dealii_debug/include/deal.II/lac/trilinos_vector.h:770)
>> In file included from /home/lev/aspect/trilinos/include/Amesos.h:34,
>> from
>> /home/lev/aspect/dealii_debug/include/deal.II/lac/trilinos_solver.h:34,
>> from
>> /home/lev/aspect/dealii_debug/include/deal.II/lac/generic_linear_algebra.h:143,
>> from
>> /home/lev/aspect/aspect_debug/include/aspect/global.h:35,
>> from
>> /home/lev/aspect/aspect_debug/include/aspect/simulator.h:42,
>> from
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc:22:
>> /home/lev/aspect/trilinos/include/Amesos_BaseSolver.h: At global scope:
>> /home/lev/aspect/trilinos/include/Amesos_BaseSolver.h:410: warning: unused
>> parameter ‘paramList’
>> /home/lev/aspect/trilinos/include/Amesos_BaseSolver.h:432: warning: unused
>> parameter ‘TimingParameterList’
>> In file included from
>> /home/lev/aspect/dealii_debug/include/deal.II/base/parameter_handler.h:24,
>> from
>> /home/lev/aspect/aspect_debug/include/aspect/simulator.h:26,
>> from
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc:22:
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/bundled/boost/smart_ptr/scoped_ptr.hpp:
>> In copy constructor ‘dealii::std_cxx11::unique_ptr<dealii::Mapping<2, 2>
>> >::unique_ptr(const dealii::std_cxx11::unique_ptr<dealii::Mapping<2, 2>
>> >&)’:
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/base/std_cxx11/unique_ptr.h:60:
>> instantiated from ‘aspect::Simulator<dim>::Simulator(ompi_communicator_t*,
>> dealii::ParameterHandler&) [with int dim = 2]’
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc:2471:
>> instantiated from here
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/bundled/boost/smart_ptr/scoped_ptr.hpp:47:
>> error: ‘boost::scoped_ptr<T>::scoped_ptr(const boost::scoped_ptr<T>&) [with
>> T = dealii::Mapping<2, 2>]’ is private
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/base/std_cxx11/unique_ptr.h:60:
>> error: within this context
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc: In constructor
>> ‘aspect::Simulator<dim>::Simulator(ompi_communicator_t*,
>> dealii::ParameterHandler&) [with int dim = 2]’:
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc:2471:
>> instantiated from here
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc:218: note:
>> synthesized method ‘dealii::std_cxx11::unique_ptr<dealii::Mapping<2, 2>
>> >::unique_ptr(const dealii::std_cxx11::unique_ptr<dealii::Mapping<2, 2> >&)’
>> first required here
>> In file included from
>> /home/lev/aspect/dealii_debug/include/deal.II/base/parameter_handler.h:24,
>> from
>> /home/lev/aspect/aspect_debug/include/aspect/simulator.h:26,
>> from
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc:22:
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/bundled/boost/smart_ptr/scoped_ptr.hpp:
>> In copy constructor ‘dealii::std_cxx11::unique_ptr<dealii::Mapping<3, 3>
>> >::unique_ptr(const dealii::std_cxx11::unique_ptr<dealii::Mapping<3, 3>
>> >&)’:
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/base/std_cxx11/unique_ptr.h:60:
>> instantiated from ‘aspect::Simulator<dim>::Simulator(ompi_communicator_t*,
>> dealii::ParameterHandler&) [with int dim = 3]’
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc:2471:
>> instantiated from here
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/bundled/boost/smart_ptr/scoped_ptr.hpp:47:
>> error: ‘boost::scoped_ptr<T>::scoped_ptr(const boost::scoped_ptr<T>&) [with
>> T = dealii::Mapping<3, 3>]’ is private
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/base/std_cxx11/unique_ptr.h:60:
>> error: within this context
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc: In constructor
>> ‘aspect::Simulator<dim>::Simulator(ompi_communicator_t*,
>> dealii::ParameterHandler&) [with int dim = 3]’:
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc:2471:
>> instantiated from here
>> /home/lev/aspect/aspect_debug/source/simulator/core.cc:218: note:
>> synthesized method ‘dealii::std_cxx11::unique_ptr<dealii::Mapping<3, 3>
>> >::unique_ptr(const dealii::std_cxx11::unique_ptr<dealii::Mapping<3, 3> >&)’
>> first required here
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/bundled/boost/system/error_code.hpp:
>> At global scope:
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/bundled/boost/system/error_code.hpp:221:
>> warning: ‘boost::system::posix_category’ defined but not used
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/bundled/boost/system/error_code.hpp:222:
>> warning: ‘boost::system::errno_ecat’ defined but not used
>>
>> /home/lev/aspect/dealii_debug/include/deal.II/bundled/boost/system/error_code.hpp:223:
>> warning: ‘boost::system::native_ecat’ defined but not used
>> make[2]: *** [CMakeFiles/aspect.dir/source/simulator/core.cc.o] Error 1
>> make[1]: *** [CMakeFiles/aspect.dir/all] Error 2
>> make: *** [all] Error 2
>>
>> Tips on how to solve it would be appreciated.
>>
>> Best regards,
>> Lev Karatun.
>>
>>
>> _______________________________________________
>> Aspect-devel mailing list
>> Aspect-devel at geodynamics.org
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.geodynamics.org_cgi-2Dbin_mailman_listinfo_aspect-2Ddevel&d=CwIFaQ&c=Ngd-ta5yRYsqeUsEDgxhcqsYYY1Xs5ogLxWPA_2Wlc4&r=c08Btfq4m9QEScXN3ZQwLZzzWQE7S8CYq1IYuzKV_Zk&m=tJ1AVo2FsV-Q84Fz6OS2qIZMpTUeSn73iBh1vOoL-4I&s=S5AxEYm2M51bBBYwKjekwC4X0fPFVN41NEhcRyvw3Hg&e=
>>
>>
>>
>> _______________________________________________
>> Aspect-devel mailing list
>> Aspect-devel at geodynamics.org
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.geodynamics.org_cgi-2Dbin_mailman_listinfo_aspect-2Ddevel&d=CwIFaQ&c=Ngd-ta5yRYsqeUsEDgxhcqsYYY1Xs5ogLxWPA_2Wlc4&r=c08Btfq4m9QEScXN3ZQwLZzzWQE7S8CYq1IYuzKV_Zk&m=tJ1AVo2FsV-Q84Fz6OS2qIZMpTUeSn73iBh1vOoL-4I&s=S5AxEYm2M51bBBYwKjekwC4X0fPFVN41NEhcRyvw3Hg&e=
>
>
> _______________________________________________
> Aspect-devel mailing list
> Aspect-devel at geodynamics.org
> https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.geodynamics.org_cgi-2Dbin_mailman_listinfo_aspect-2Ddevel&d=CwIFaQ&c=Ngd-ta5yRYsqeUsEDgxhcqsYYY1Xs5ogLxWPA_2Wlc4&r=c08Btfq4m9QEScXN3ZQwLZzzWQE7S8CYq1IYuzKV_Zk&m=tJ1AVo2FsV-Q84Fz6OS2qIZMpTUeSn73iBh1vOoL-4I&s=S5AxEYm2M51bBBYwKjekwC4X0fPFVN41NEhcRyvw3Hg&e=
>
>
>
> _______________________________________________
> Aspect-devel mailing list
> Aspect-devel at geodynamics.org
> https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.geodynamics.org_cgi-2Dbin_mailman_listinfo_aspect-2Ddevel&d=CwIGaQ&c=Ngd-ta5yRYsqeUsEDgxhcqsYYY1Xs5ogLxWPA_2Wlc4&r=R5lvg9JC99XvuTgScgbY_QFS80R7PEA2q0EPwDy7VQw&m=hQ2ClMQtaiXOLdBNbZSCUQKZqCsXZT517zxswRk1j-s&s=XRsatNYOGKjztBbXCCQNnZADxPi7Ehgp7vphUTYhDSc&e=
--
Timo Heister
http://www.math.clemson.edu/~heister/
More information about the Aspect-devel
mailing list