[cig-commits] r5444 - in mc/3D/CitcomS/trunk/doc/manual: . graphics

[tan2 at geodynamics.org]

Author: tan2
Date: 2006-12-04 16:14:58 -0800 (Mon, 04 Dec 2006)
New Revision: 5444

Added:
   mc/3D/CitcomS/trunk/doc/manual/graphics/fulltest.xsect.100.jpg
   mc/3D/CitcomS/trunk/doc/manual/graphics/regtest.100.z005.jpg
Modified:
   mc/3D/CitcomS/trunk/doc/manual/citcoms.lyx
Log:
Finished the GMT script section

Modified: mc/3D/CitcomS/trunk/doc/manual/citcoms.lyx
===================================================================
--- mc/3D/CitcomS/trunk/doc/manual/citcoms.lyx	2006-12-04 23:47:57 UTC (rev 5443)
+++ mc/3D/CitcomS/trunk/doc/manual/citcoms.lyx	2006-12-05 00:14:58 UTC (rev 5444)
@@ -1,4 +1,4 @@
-#LyX 1.4.3 created this file. For more info see http://www.lyx.org/
+#LyX 1.4.2 created this file. For more info see http://www.lyx.org/
 \lyxformat 245
 \begin_document
 \begin_header
@@ -5757,8 +5757,8 @@
 \end_layout
 
 \begin_layout Standard
-The former file is the data file containing simulation results; its format
- can be found in Appendix 
+The former file is the data file containing simulation results and is referred
+ to as the "capfile"; its format can be found in Appendix 
 \begin_inset LatexCommand \ref{cha:Appendix-C:-CitComS,}
 
 \end_inset
@@ -6299,6 +6299,7 @@
 {0,1,2,3,4,5,6,7,8,9,10,11}
 \family default
 .
+ You can also specify a subset of caps to visualize.
 \end_layout
 
 \begin_layout Standard
@@ -6307,6 +6308,16 @@
 \end_layout
 
 \begin_layout Section
+Using MayaVi for Visualization
+\end_layout
+
+\begin_layout Standard
+
+\series bold
+TODO: MayaVi Scripts
+\end_layout
+
+\begin_layout Section
 Using GMT Commands for Visualization
 \end_layout
 
@@ -6326,14 +6337,196 @@
 , which can plot the temperature field in horizontal and radial cross sections,
  respectively, are provided.
  These scripts use GMT commands to generate EPS images.
+ GMT is very customizable.
+ Users might wish to customize the scripts for their need.
 \end_layout
 
 \begin_layout Standard
+The usages of 
+\family typewriter
+plot_layer.py
+\family default
+ is:
+\end_layout
 
-\series bold
-TODO: MayaVi Scripts
+\begin_layout LyX-Code
+
+\family typewriter
+$ plot_layer.py modelname caps step layer
 \end_layout
 
+\begin_layout Standard
+The script will look for the capfile(s) 
+\family typewriter
+modelname.cap00.step
+\family default
+, if 
+\family typewriter
+caps
+\family default
+ is 1, or 
+\family typewriter
+modelname.cap00.step
+\family default
+, 
+\family typewriter
+modelname.cap01.step
+\family default
+, ...
+ through 
+\family typewriter
+modelname.cap11.step
+\family default
+, if 
+\family typewriter
+caps
+\family default
+ is 12.
+ A slice of the capfile at the specified radial layer is then plotted in
+ Mercator projection, if 
+\family typewriter
+caps
+\family default
+ is 1, or in Hammer-Aitoff projection, if 
+\family typewriter
+caps
+\family default
+ is 12.
+\end_layout
+
+\begin_layout Standard
+\begin_inset Float figure
+placement h
+wide false
+sideways false
+status open
+
+\begin_layout Standard
+\align center
+\begin_inset Graphics
+	filename graphics/regtest.100.z005.jpg
+	lyxscale 30
+	scale 30
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Caption
+Temperature field generated by 
+\family typewriter
+plot_layer.py
+\family default
+.
+ This image is the mid-layer (layer 5) of the sample data 
+\family typewriter
+visual/samples/regtest.cap00.100
+\family default
+.
+ The resolution of the image is poor because the data has only 9
+\begin_inset Formula $\times$
+\end_inset
+
+9
+\begin_inset Formula $\times$
+\end_inset
+
+9 nodes.
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Standard
+The usages of 
+\family typewriter
+plot_annulus.py
+\family default
+ is:
+\end_layout
+
+\begin_layout LyX-Code
+
+\family typewriter
+$ plot_annulus.py modelname step
+\end_layout
+
+\begin_layout Standard
+The scrip will ask you a few question on how to specify the great circle
+ path.
+ There are three options: 1) a starting point and an azimuth, 2) a starting
+ point and another point on the great circle, and 3) a starting point and
+ a rotation pole.
+ The great circle path is used to construct the radial cross section.
+\end_layout
+
+\begin_layout Standard
+\begin_inset Float figure
+placement h
+wide false
+sideways false
+status open
+
+\begin_layout Standard
+\align center
+\begin_inset Graphics
+	filename graphics/fulltest.xsect.100.jpg
+	lyxscale 40
+	scale 40
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Caption
+Temperature fields generated by 
+\family typewriter
+plot_annulus.py
+\family default
+.
+ The top panel is the horizontal cross section at the mid layer in Hammer-Aitoff
+ projection.
+ The thick line marks the surface track of the radial cross section.
+ The bottom panel is the radial cross section.
+ The cross section starts at 0
+\begin_inset Formula $\deg$
+\end_inset
+
+ latitude and 0
+\begin_inset Formula $\deg$
+\end_inset
+
+ longitude and has an azimuth of 45
+\begin_inset Formula $\deg$
+\end_inset
+
+(TODO: Sue, can you please insert three 
+\begin_inset Quotes sld
+\end_inset
+
+degree
+\begin_inset Quotes srd
+\end_inset
+
+ symbols here?).
+ The image is from the sample data 
+\family typewriter
+visual/samples/fulltest.cap*.100
+\family default
+.
+ There is always a gap of the left (starting point) of the cross section.
+ Users familiar to GMT are welcomed to contribute a fix to the script.
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
 \begin_layout Chapter
 Cookbooks
 \end_layout

Added: mc/3D/CitcomS/trunk/doc/manual/graphics/fulltest.xsect.100.jpg
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Property changes on: mc/3D/CitcomS/trunk/doc/manual/graphics/fulltest.xsect.100.jpg
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Added: mc/3D/CitcomS/trunk/doc/manual/graphics/regtest.100.z005.jpg
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Property changes on: mc/3D/CitcomS/trunk/doc/manual/graphics/regtest.100.z005.jpg
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