[cig-commits] r4735 - in geodyn/3D/MAG/trunk: doc src

Fri Oct 6 18:03:02 PDT 2006

Author: wei
Date: 2006-10-06 18:03:01 -0700 (Fri, 06 Oct 2006)
New Revision: 4735

Modified:
   geodyn/3D/MAG/trunk/doc/mag_book.lyx
   geodyn/3D/MAG/trunk/src/makefile
Log:
More editing on mag manual

Modified: geodyn/3D/MAG/trunk/doc/mag_book.lyx
===================================================================

--- geodyn/3D/MAG/trunk/doc/mag_book.lyx	2006-10-07 00:47:44 UTC (rev 4734)
+++ geodyn/3D/MAG/trunk/doc/mag_book.lyx	2006-10-07 01:03:01 UTC (rev 4735)
@@ -398,7 +398,7 @@
 \end_inset
 
 -
-\begin_inset LatexCommand \cite{key-6}
+\begin_inset LatexCommand \cite{key-8}
 
 \end_inset
 
@@ -788,7 +788,8 @@
 \end_layout
 
 \begin_layout Description
-~/idl This is where the postprosessing IDL routines reside.
+~/idl This is where the postprosessing IDL(Interactive Data Language) routines
+ reside.
 \end_layout
 
 \begin_layout Subsection
@@ -1011,17 +1012,19 @@
 \end_layout
 
 \begin_layout LyX-Code
-$ mv magx magx32s64 [Renaming is optional]
+$ mv magx magx32s4 (Renaming is optional)
 \end_layout
 
 \end_deeper
 \begin_layout Enumerate
-Background execute using par.XXX as input file and .YYY as output files extension:
+MAG uses a standard input file.
+ Background execute using par.XXX as input file and .YYY as output files extension
+:
 \end_layout
 
 \begin_deeper
 \begin_layout LyX-Code
-$ magx32s4 <par.XXX >p.YYY 
+$ magx32s4 <par.XXX >p.YYY &
 \end_layout
 
 \begin_layout Standard
@@ -1030,7 +1033,7 @@
 \end_layout
 
 \begin_layout LyX-Code
-$ magx32s4 <par.bnch0 >p.bench0
+$ magx32s4 <par.bnch0 >p.bench0 &
 \end_layout
 
 \end_deeper
@@ -1040,13 +1043,31 @@
 \end_layout
 
 \begin_layout Enumerate
-Compare your output files with the data provided in the directory: ~/bench-data.
+MAG produces a series of output files.
+ For example, when using input file par.bnch0 (example in step 4) MAG generates:
+ 
+\family typewriter
+l.bench0, ls.bench0, g[i].bench0 
+\family default
+and 
+\family typewriter
+d[i].bench0
+\family default
+, where i=0,1,2...9.
+ See Appendix 
+\begin_inset LatexCommand \ref{cha:MAG-Output-File}
+
+\end_inset
+
+ for detail on MAG's output files.
+ Compare your output files with the data provided in the directory: ~/bench-data
+/data_bench0.
 \end_layout
 
 \begin_layout Enumerate
 REMEMBER TO DELETE, MOVE, or RENAME ALL OUTPUT FILES IN CURRENT DIRECTORY
  BEFORE RE-RUNNING WITH THE SAME "output" FILENAME -- RETAINING SAME-NAMED
- OUTPUT FILES IN THE CURRENT DIRECTORY CAUSES MAG TO CRASH!!
+ OUTPUT FILES IN THE CURRENT DIRECTORY CAUSES MAG TO CRASH!! 
 \end_layout
 
 \begin_layout Section
@@ -1080,10 +1101,9 @@
 \end_layout
 
 \begin_layout Standard
-Once you finish running MAG, you should have a series of output data files.
- To visualize your results, MAG software package provides a set of IDL routines.
- IDL routines which are designed for MAG can be found in the directory called
- 
+Upon finish running MAG, you should have a series of output data files.
+ To visualize your results, MAG software package provides a set of IDL routines
+ and they can be found in the directory called 
 \family typewriter
 PREFIX/idl
 \family default
@@ -1092,11 +1112,29 @@
 PREFIX
 \family default
  is the directory under which you installed MAG.
+ We should mention here that IDL is a commercial visulization tool by 
+\family sans
+\emph on
+ITT Visual Information Solutions
+\family default
+\emph default
  
+\begin_inset LatexCommand \url{http:/www.ittvis.com/idl}
+
+\end_inset
+
+.
+ A free IDL compatible program called GDL, 
+\begin_inset LatexCommand \url{http://gnudatalanguage.sourceforge.net}
+
+\end_inset
+
+, works with MAG's line plot IDL procedure MAGTS.pro, but not with the interactiv
+e IDL procedures in MAG.
 \end_layout
 
 \begin_layout Section
-Time Series Plot
+Time Series and Spectra Plot
 \end_layout
 
 \begin_layout Standard
@@ -1309,7 +1347,7 @@
 \begin_inset Float figure
 wide false
 sideways false
-status collapsed
+status open
 
 \begin_layout Standard
 \align center
@@ -3196,7 +3234,7 @@
 \end_layout
 
 \begin_layout Description
-g.[outfile] or g[i].[outfile], where i=1,2,..9 (optional, written when ngstep>0):
+g.[outfile] or g[i].[outfile], where i=0,1,2,..9 (optional, written when ngstep>0):
  contains temperature, velocity and mag.
  field components for graphics processing (idl-program magts) 
 \end_layout

Modified: geodyn/3D/MAG/trunk/src/makefile
===================================================================
--- geodyn/3D/MAG/trunk/src/makefile	2006-10-07 00:47:44 UTC (rev 4734)
+++ geodyn/3D/MAG/trunk/src/makefile	2006-10-07 01:03:01 UTC (rev 4735)
@@ -7,7 +7,7 @@
 all: magx
 
  magx  : nl.o prep.o amhd.o legtf.o rderiv.o stor.o prnt.o ludc.o dtchck.o kei.o mei.o pbar.o gquad.o random.o chebtf.o chebi.o rffti.o fact.o cftrig.o fourtf.o fax.o fftrig.o sgesl.o sgefa.o fft99a.o fft99b.o vpassm.o wpassm.o spherictf.o filter.o graphout.o moveout.o movaout.o movmout.o cmbcoeff.o spectrum.o mapdata.o copydat.o stopiteration.o 
-	g77 nl.o prep.o amhd.o legtf.o rderiv.o stor.o prnt.o ludc.o dtchck.o kei.o mei.o pbar.o gquad.o random.o chebtf.o chebi.o rffti.o fact.o cftrig.o fourtf.o fax.o fftrig.o sgesl.o sgefa.o fft99a.o fft99b.o vpassm.o wpassm.o spherictf.o filter.o graphout.o moveout.o movaout.o movmout.o cmbcoeff.o spectrum.o mapdata.o copydat.o stopiteration.o -o magx32s4
+	g77 nl.o prep.o amhd.o legtf.o rderiv.o stor.o prnt.o ludc.o dtchck.o kei.o mei.o pbar.o gquad.o random.o chebtf.o chebi.o rffti.o fact.o cftrig.o fourtf.o fax.o fftrig.o sgesl.o sgefa.o fft99a.o fft99b.o vpassm.o wpassm.o spherictf.o filter.o graphout.o moveout.o movaout.o movmout.o cmbcoeff.o spectrum.o mapdata.o copydat.o stopiteration.o -o magx
 nl.o	: nl.f param.f com3.f com8.f
 	g77   -O2 -funroll-all-loops  -c -C  nl.f   
 prep.o	: prep.f param.f com1.f com2.f com3.f com4.f com5.f com6.f com7.f com8.f

