[cig-commits] r7473 - in long/3D/Gale/trunk: . documentation documentation/images input/cookbook

walter at geodynamics.org walter at geodynamics.org
Mon Jun 25 03:06:15 PDT 2007


Author: walter
Date: 2007-06-25 03:06:14 -0700 (Mon, 25 Jun 2007)
New Revision: 7473

Added:
   long/3D/Gale/trunk/documentation/images/Paraview_normal_stress.png
   long/3D/Gale/trunk/input/cookbook/viscous_normal_stress.xml
Removed:
   long/3D/Gale/trunk/documentation/images/Paraview_viscous_open_boundary.png
   long/3D/Gale/trunk/input/cookbook/viscous_open_boundary.xml
Modified:
   long/3D/Gale/trunk/
   long/3D/Gale/trunk/documentation/gale.lyx
   long/3D/Gale/trunk/documentation/images/Paraview_thermal.png
   long/3D/Gale/trunk/input/cookbook/thermal.xml
Log:
 r1846 at earth:  boo | 2007-06-25 03:01:34 -0700
 Add in radiogenic to the manual and thermal example.  Change open boundary to normal stress.



Property changes on: long/3D/Gale/trunk
___________________________________________________________________
Name: svk:merge
   - 3a629746-de10-0410-b17b-fd6ecaaa963e:/cig:1842
   + 3a629746-de10-0410-b17b-fd6ecaaa963e:/cig:1846

Modified: long/3D/Gale/trunk/documentation/gale.lyx
===================================================================
--- long/3D/Gale/trunk/documentation/gale.lyx	2007-06-25 09:18:26 UTC (rev 7472)
+++ long/3D/Gale/trunk/documentation/gale.lyx	2007-06-25 10:06:14 UTC (rev 7473)
@@ -1,4 +1,4 @@
-#LyX 1.4.3 created this file. For more info see http://www.lyx.org/
+#LyX 1.4.4 created this file. For more info see http://www.lyx.org/
 \lyxformat 245
 \begin_document
 \begin_header
@@ -3345,12 +3345,8 @@
 
 \end_layout
 
-\begin_layout Standard
-
-\end_layout
-
 \begin_layout Section
-Viscous Material in Extension with Open Boundaries
+Viscous Material in Extension with Normal Stress Boundaries
 \end_layout
 
 \begin_layout Standard
@@ -3359,11 +3355,14 @@
 
 \end_inset
 
- to use an open boundary on the bottom, instead of specifying the velocity.
- A stress boundary condition simulates the effect of material below the
- material pushing up, supporting the material in the box.
- This will allow material to flow in or out of the simulation as material
- is thinned out or piled up.
+ to use a stress boundary normal to the bottom surface, instead of specifying
+ the velocity.
+ A normal stress boundary condition simulates the effect of material below
+ the material pushing up, supporting the material in the box.
+ Then, when material piles up, material will overcome the stress boundary
+ and flow out of the simulation.
+ Conversely, if material is thinned out, the stress boundary will push new
+ material into the simulation.
  This kind of boundary is often more relevant for geological simulations.
 \end_layout
 
@@ -3686,7 +3685,7 @@
 \begin_layout Standard
 A worked example is at 
 \family typewriter
-input/cookbook/viscous_open_boundary.xml
+input/cookbook/viscous_normal_stress.xml
 \family default
 .
  A visualization of the strain rate invariant and velocity (see Section
@@ -3696,7 +3695,7 @@
 \end_inset
 
 ) is shown in Figure 
-\begin_inset LatexCommand \ref{fig:Strain-viscous-open-boundary}
+\begin_inset LatexCommand \ref{fig:Strain-viscous-normal-stress}
 
 \end_inset
 
@@ -3723,12 +3722,12 @@
 \end_layout
 
 \begin_layout Caption
-\begin_inset LatexCommand \label{fig:Strain-viscous-open-boundary}
+\begin_inset LatexCommand \label{fig:Strain-viscous-normal-stress}
 
 \end_inset
 
 Strain rate invariant and velocities of viscous material in extension with
- an open boundary
+ a normal stress boundary
 \end_layout
 
 \end_inset
@@ -4595,8 +4594,7 @@
 
 \end_inset
 
- and heats it on the bottom.
- 
+, heats it on the bottom, and adds in radiogenic heating throughout.
 \end_layout
 
 \begin_layout Enumerate
@@ -4975,8 +4973,8 @@
 
 \end_deeper
 \begin_layout Enumerate
-Specify the background material's coefficient of thermal expansivity and
- diffusivity by adding after
+Specify the background material's thermal expansivity, thermal diffusivity,
+ radiogenic heating rate, and radiogenic decay time scale by adding after
 \end_layout
 
 \begin_deeper
@@ -5008,6 +5006,30 @@
   <param name="diffusivity">1.0</param>
 \end_layout
 
+\begin_layout LyX-Code
+  <list name="heatingElements">
+\end_layout
+
+\begin_layout LyX-Code
+    <struct>
+\end_layout
+
+\begin_layout LyX-Code
+      <param name="Q">1.0</param>
+\end_layout
+
+\begin_layout LyX-Code
+      <param name="lambda">1.0</param>
+\end_layout
+
+\begin_layout LyX-Code
+    </struct>
+\end_layout
+
+\begin_layout LyX-Code
+  </list>
+\end_layout
+
 \begin_layout Standard
 For the sphere, after the lines
 \end_layout
@@ -5040,8 +5062,32 @@
   <param name="diffusivity">10.0</param>
 \end_layout
 
+\begin_layout LyX-Code
+  <list name="heatingElements">
+\end_layout
+
+\begin_layout LyX-Code
+    <struct>
+\end_layout
+
+\begin_layout LyX-Code
+      <param name="Q">1000.0</param>
+\end_layout
+
+\begin_layout LyX-Code
+      <param name="lambda">10.0</param>
+\end_layout
+
+\begin_layout LyX-Code
+    </struct>
+\end_layout
+
+\begin_layout LyX-Code
+  </list>
+\end_layout
+
 \begin_layout Standard
-This makes the sphere more expansive and conductive.
+This makes the sphere more expansive, conductive, and radioactive.
 \end_layout
 
 \end_deeper
@@ -5114,7 +5160,7 @@
 \end_layout
 
 \begin_layout LyX-Code
-    <param name="value">0.0001</param> 
+    <param name="value">0.01</param> 
 \end_layout
 
 \end_deeper
@@ -7789,6 +7835,30 @@
 </struct>
 \end_layout
 
+\begin_layout LyX-Code
+<struct name="internalHeatingTerm">
+\end_layout
+
+\begin_layout LyX-Code
+  <param name="Type">RadiogenicHeatingTerm</param>
+\end_layout
+
+\begin_layout LyX-Code
+  <param name="ForceVector">residual</param>
+\end_layout
+
+\begin_layout LyX-Code
+  <param name="Swarm">picIntegrationPoints</param>
+\end_layout
+
+\begin_layout LyX-Code
+</struct>   
+\end_layout
+
+\begin_layout LyX-Code
+
+\end_layout
+
 \begin_layout Standard
 You should never need to modify these components.
 \end_layout
@@ -7832,7 +7902,12 @@
 
 \end_inset
 
-)
+) and radiogenic heating (see Section 
+\begin_inset LatexCommand \ref{sec:Materials}
+
+\end_inset
+
+).
 \end_layout
 
 \begin_layout Standard
@@ -9722,16 +9797,103 @@
 \end_layout
 
 \begin_layout Standard
-You can also specify a density, a coefficient of thermal expansivity (
+You can specify a density, a coefficient of thermal expansivity (
 \begin_inset Formula $\alpha$
 \end_inset
 
-), and a thermal diffusivity for each material.
+), and a thermal diffusivity, for each material.
 \end_layout
 
 \begin_layout Standard
+The density and expansivity are used by the BuoyancyForceTerm component
+ (see Section 
+\begin_inset LatexCommand \ref{sub:BouyancyForceTerm}
+
+\end_inset
+
+) to create buoyancy forces.
+ The diffusivity is used by the temperature solver (see Section 
+\begin_inset LatexCommand \ref{sec:Temperature-components}
+
+\end_inset
+
+).
+\end_layout
+
+\begin_layout Standard
+You can also specify multiple radiogenic heating rates (Q) and radiogenic
+ timescales (
+\begin_inset Formula $\lambda$
+\end_inset
+
+).
+ This simulates the action of multiple radioactive materials with different
+ half-lives.
+ To enable this, you must provide a list of Q's and 
+\begin_inset Formula $\lambda$
+\end_inset
+
+'s.
+ For example, to specify two different radioactive species, add something
+ like
+\end_layout
+
+\begin_layout LyX-Code
+<list name="heatingElements">
+\end_layout
+
+\begin_layout LyX-Code
+  <struct>
+\end_layout
+
+\begin_layout LyX-Code
+    <param name="Q">1.0</param>
+\end_layout
+
+\begin_layout LyX-Code
+    <param name="lambda">1.0</param>
+\end_layout
+
+\begin_layout LyX-Code
+  </struct>
+\end_layout
+
+\begin_layout LyX-Code
+  <struct>
+\end_layout
+
+\begin_layout LyX-Code
+    <param name="Q">2.0</param>
+\end_layout
+
+\begin_layout LyX-Code
+    <param name="lambda">2.0</param>
+\end_layout
+
+\begin_layout LyX-Code
+  </struct>
+\end_layout
+
+\begin_layout LyX-Code
+</list>
+\end_layout
+
+\begin_layout Standard
+At a given time, each radioactive element will generate
+\end_layout
+
+\begin_layout Standard
+\begin_inset Formula \[
+Qe^{-\lambda t}\]
+
+\end_inset
+
+ units of energy.
+\end_layout
+
+\begin_layout Standard
 \begin_inset Tabular
-<lyxtabular version="3" rows="4" columns="2">
+<lyxtabular version="3" rows="6" columns="2">
 <features>
 <column alignment="center" valignment="top" leftline="true" width="0">
 <column alignment="center" valignment="top" leftline="true" rightline="true" width="0">
@@ -9785,7 +9947,7 @@
 
 \end_inset
 </cell>
-<cell alignment="center" valignment="top" topline="true" leftline="true" usebox="none">
+<cell alignment="center" valignment="top" topline="true" leftline="true" rightline="true" usebox="none">
 \begin_inset Text
 
 \begin_layout Standard
@@ -9805,7 +9967,7 @@
 
 \end_inset
 </cell>
-<cell alignment="center" valignment="top" topline="true" leftline="true" usebox="none">
+<cell alignment="center" valignment="top" topline="true" leftline="true" rightline="true" usebox="none">
 \begin_inset Text
 
 \begin_layout Standard
@@ -9815,25 +9977,51 @@
 \end_inset
 </cell>
 </row>
-</lyxtabular>
+<row bottomline="true">
+<cell alignment="center" valignment="top" topline="true" leftline="true" usebox="none">
+\begin_inset Text
 
+\begin_layout Standard
+Q
+\end_layout
+
 \end_inset
+</cell>
+<cell alignment="center" valignment="top" topline="true" leftline="true" usebox="none">
+\begin_inset Text
 
+\begin_layout Standard
+0
+\end_layout
 
-\newline
-The density and expansivity are used by the BuoyancyForceTerm component
- (see Section 
-\begin_inset LatexCommand \ref{sub:BouyancyForceTerm}
+\end_inset
+</cell>
+</row>
+<row bottomline="true">
+<cell alignment="center" valignment="top" topline="true" leftline="true" usebox="none">
+\begin_inset Text
 
+\begin_layout Standard
+lambda
+\end_layout
+
 \end_inset
+</cell>
+<cell alignment="center" valignment="top" topline="true" leftline="true" usebox="none">
+\begin_inset Text
 
-) to create buoyancy forces.
- The diffusivity is used by the temperature solver (see Section 
-\begin_inset LatexCommand \ref{sec:Temperature-components}
+\begin_layout Standard
+0
+\end_layout
 
 \end_inset
+</cell>
+</row>
+</lyxtabular>
 
-).
+\end_inset
+
+
 \end_layout
 
 \begin_layout Subsection
@@ -11935,6 +12123,13 @@
 
 \begin_layout Standard
 Gales supports two types of Buoyancy forces.
+ The first one, 
+\family typewriter
+BuoyancyForceTerm
+\family default
+, is more general, allowing you to specify buoyancy properties for each
+ material.
+ 
 \end_layout
 
 \begin_layout Subsection

Added: long/3D/Gale/trunk/documentation/images/Paraview_normal_stress.png
===================================================================
(Binary files differ)


Property changes on: long/3D/Gale/trunk/documentation/images/Paraview_normal_stress.png
___________________________________________________________________
Name: svn:mime-type
   + image/x-png

Modified: long/3D/Gale/trunk/documentation/images/Paraview_thermal.png
===================================================================
(Binary files differ)

Deleted: long/3D/Gale/trunk/documentation/images/Paraview_viscous_open_boundary.png
===================================================================
(Binary files differ)

Modified: long/3D/Gale/trunk/input/cookbook/thermal.xml
===================================================================
--- long/3D/Gale/trunk/input/cookbook/thermal.xml	2007-06-25 09:18:26 UTC (rev 7472)
+++ long/3D/Gale/trunk/input/cookbook/thermal.xml	2007-06-25 10:06:14 UTC (rev 7473)
@@ -370,6 +370,12 @@
       <param name="density">1.0</param>
       <param name="alpha">1.0</param>
       <param name="diffusivity">1.0</param>
+      <list name="heatingElements">
+        <struct>
+          <param name="Q">1.0</param>
+          <param name="lambda">1.0</param>
+        </struct>
+      </list>
       <list name="Rheology">
         <param>backgroundViscosity</param>
         <param>storeViscosity</param>
@@ -388,6 +394,12 @@
       <param name="density">1.0</param>
       <param name="alpha">10.0</param>
       <param name="diffusivity">10.0</param>
+      <list name="heatingElements">
+        <struct>
+          <param name="Q">1000.0</param>
+          <param name="lambda">10.0</param>
+        </struct>
+      </list>
       <list name="Rheology">
         <param>sphereViscosity</param>
         <param>storeViscosity</param>
@@ -468,6 +480,11 @@
       <param name="defaultDiffusivity">defaultDiffusivity</param>
       <param name="UpwindXiFunction">Exact</param>
     </struct>
+    <struct name="internalHeatingTerm">
+      <param name="Type">RadiogenicHeatingTerm</param>
+      <param name="ForceVector">residual</param>
+      <param name="Swarm">picIntegrationPoints</param>
+    </struct>	
 
 
   </struct>
@@ -570,7 +587,7 @@
           <struct>
             <param name="name">vx</param>
             <param name="type">double</param>
-            <param name="value">0.0001</param>
+            <param name="value">0.01</param>
           </struct>
         </list>
       </struct>

Added: long/3D/Gale/trunk/input/cookbook/viscous_normal_stress.xml
===================================================================
--- long/3D/Gale/trunk/input/cookbook/viscous_normal_stress.xml	2007-06-25 09:18:26 UTC (rev 7472)
+++ long/3D/Gale/trunk/input/cookbook/viscous_normal_stress.xml	2007-06-25 10:06:14 UTC (rev 7473)
@@ -0,0 +1,498 @@
+<?xml version="1.0"?>
+<StGermainData xmlns="http://www.vpac.org/StGermain/XML_IO_Handler/Jun2003">
+  <struct name="components">
+    <struct name="conditionFunctions">
+      <param name="Type">StgFEM_StandardConditionFunctions</param>
+    </struct>
+    <struct name="mesh-constant">
+      <param name="Type">FeMesh</param>
+      <param name="elementType">constant</param>
+    </struct>
+    <struct name="constantMesh-generator">
+      <param name="Type">C0Generator</param>
+      <param name="mesh">mesh-constant</param>
+      <param name="elementMesh">mesh-linear</param>
+    </struct>
+    <struct name="mesh-linear">
+      <param name="Type">FeMesh</param>
+      <param name="elementType">linear</param>
+    </struct>
+    <struct name="linearMesh-generator">
+      <param name="Type">CartesianGenerator</param>
+      <param name="mesh">mesh-linear</param>
+      <param name="dim">dim</param>
+      <param name="shadowDepth">shadowDepth</param>
+      <list name="size">
+        <param>elementResI</param>
+        <param>elementResJ</param>
+        <param>elementResK</param>
+      </list>
+      <list name="minCoord">
+        <param>minX</param>
+        <param>minY</param>
+        <param>minZ</param>
+      </list>
+      <list name="maxCoord">
+        <param>maxX</param>
+        <param>maxY</param>
+        <param>maxZ</param>
+      </list>
+    </struct>
+    <struct name="velocity">
+      <param name="Type">MeshVariable</param>
+      <param name="mesh">mesh-linear</param>
+      <param name="Rank">Vector</param>
+      <param name="DataType">Double</param>
+      <param name="VectorComponentCount">dim</param>
+      <list name="names">
+        <param>vx</param>
+        <param>vy</param>
+        <param>vz</param>
+      </list>
+    </struct>
+    <struct name="velocityBCs">
+      <param name="Type">CompositeVC</param>
+      <param name="Data">mesh-linear</param>
+    </struct>
+    <struct name="velocityICs">
+      <param name="Type">CompositeVC</param>
+      <param name="Data">mesh-linear</param>
+    </struct>
+    <struct name="velocityDofLayout">
+      <param name="Type">DofLayout</param>
+      <param name="mesh">mesh-linear</param>
+      <param name="BaseVariableCount">dim</param>
+      <list name="BaseVariables">
+        <param>vx</param>
+        <param>vy</param>
+        <param>vz</param>
+      </list>
+    </struct>
+    <struct name="VelocityField">
+      <param name="Type">FeVariable</param>
+      <param name="FEMesh">mesh-linear</param>
+      <param name="DofLayout">velocityDofLayout</param>
+      <param name="BC">velocityBCs</param>
+      <param name="IC">velocityICs</param>
+      <param name="LinkedDofInfo">velocityLinkedDofs</param>
+    </struct>
+    <struct name="VelocityMagnitudeField">
+      <param name="Type">OperatorFeVariable</param>
+      <param name="Operator">Magnitude</param>
+      <param name="FeVariable">VelocityField</param>
+    </struct>
+    <struct name="VelocityGradientsField">
+      <param name="Type">OperatorFeVariable</param>
+      <param name="Operator">Gradient</param>
+      <param name="FeVariable">VelocityField</param>
+    </struct>
+    <struct name="VelocityGradientsInvariantField">
+      <param name="Type">OperatorFeVariable</param>
+      <param name="Operator">TensorInvariant</param>
+      <param name="FeVariable">VelocityGradientsField</param>
+    </struct>
+    <struct name="StrainRateField">
+      <param name="Type">OperatorFeVariable</param>
+      <param name="Operator">TensorSymmetricPart</param>
+      <param name="FeVariable">VelocityGradientsField</param>
+    </struct>
+    <struct name="VorticityField">
+      <param name="Type">OperatorFeVariable</param>
+      <param name="Operator">TensorAntisymmetricPart</param>
+      <param name="FeVariable">VelocityGradientsField</param>
+    </struct>
+    <struct name="StrainRateInvariantField">
+      <param name="Type">OperatorFeVariable</param>
+      <param name="Operator">SymmetricTensor_Invariant</param>
+      <param name="FeVariable">StrainRateField</param>
+    </struct>
+    <struct name="pressure">
+      <param name="Type">MeshVariable</param>
+      <param name="mesh">mesh-constant</param>
+      <param name="Rank">Scalar</param>
+      <param name="DataType">Double</param>
+    </struct>
+    <struct name="pressureDofLayout">
+      <param name="Type">DofLayout</param>
+      <param name="mesh">mesh-constant</param>
+      <list name="BaseVariables">
+        <param>pressure</param>
+      </list>
+    </struct>
+    <struct name="PressureField">
+      <param name="Type">FeVariable</param>
+      <param name="FEMesh">mesh-constant</param>
+      <param name="DofLayout">pressureDofLayout</param>
+      <param name="LinkedDofInfo">pressureLinkedDofs</param>
+    </struct>
+    <struct name="cellLayout">
+      <param name="Type">SingleCellLayout</param>
+    </struct>
+    <struct name="particleLayout">
+      <param name="Type">GaussParticleLayout</param>
+    </struct>
+    <struct name="gaussSwarm">
+      <param name="Type">IntegrationPointsSwarm</param>
+      <param name="CellLayout">cellLayout</param>
+      <param name="ParticleLayout">particleLayout</param>
+      <param name="FeMesh">mesh-linear</param>
+      <param name="TimeIntegrator">timeIntegrator</param>
+      <param name="IntegrationPointMapper">gaussMapper</param>
+    </struct>
+    <struct name="gaussMapper">
+      <param name="Type">GaussMapper</param>
+      <param name="IntegrationPointsSwarm">gaussSwarm</param>
+      <param name="MaterialPointsSwarm">gaussMaterialSwarm</param>
+    </struct>
+    <struct name="backgroundLayout">
+      <param name="Type">BackgroundParticleLayout</param>
+    </struct>
+    <struct name="gaussMaterialSwarm">
+      <param name="Type">MaterialPointsSwarm</param>
+      <param name="CellLayout">cellLayout</param>
+      <param name="ParticleLayout">backgroundLayout</param>
+      <param name="FeMesh">mesh-linear</param>
+    </struct>
+    <struct name="timeIntegrator">
+      <param name="Type">TimeIntegrator</param>
+      <param name="order">1</param>
+      <param name="simultaneous">t</param>
+      <param name="Context">context</param>
+    </struct>
+    <struct name="elementCellLayout">
+      <param name="Type">ElementCellLayout</param>
+      <param name="Mesh">mesh-linear</param>
+    </struct>
+    <struct name="weights">
+      <param name="Type">PCDVC</param>
+      <param name="resolutionX">10</param>
+      <param name="resolutionY">10</param>
+      <param name="resolutionZ">10</param>
+      <param name="lowerT">0.6</param>
+      <param name="upperT">25</param>
+      <param name="maxDeletions">3</param>
+      <param name="maxSplits">3</param>
+      <param name="MaterialPointsSwarm">materialSwarm</param>
+    </struct>
+    <struct name="localLayout">
+      <param name="Type">MappedParticleLayout</param>
+    </struct>
+    <struct name="picIntegrationPoints">
+      <param name="Type">IntegrationPointsSwarm</param>
+      <param name="CellLayout">elementCellLayout</param>
+      <param name="ParticleLayout">localLayout</param>
+      <param name="FeMesh">mesh-linear</param>
+      <param name="WeightsCalculator">weights</param>
+      <param name="TimeIntegrator">timeIntegrator</param>
+      <param name="IntegrationPointMapper">mapper</param>
+    </struct>
+    <struct name="mapper">
+      <param name="Type">CoincidentMapper</param>
+      <param name="IntegrationPointsSwarm">picIntegrationPoints</param>
+      <param name="MaterialPointsSwarm">materialSwarm</param>
+    </struct>
+    <struct name="materialSwarmParticleLayout">
+      <param name="Type">MeshParticleLayout</param>
+      <param name="mesh">mesh-linear</param>
+      <param name="cellParticleCount">particlesPerCell</param>
+    </struct>
+    <struct name="materialSwarm">
+      <param name="Type">MaterialPointsSwarm</param>
+      <param name="CellLayout">elementCellLayout</param>
+      <param name="ParticleLayout">materialSwarmParticleLayout</param>
+      <param name="FeMesh">mesh-linear</param>
+      <param name="SplittingRoutine">splittingRoutine</param>
+      <param name="RemovalRoutine">removalRoutine</param>
+      <param name="EscapedRoutine">escapedRoutine</param>
+    </struct>
+    <struct name="materialSwarmAdvector">
+      <param name="Type">SwarmAdvector</param>
+      <param name="Swarm">materialSwarm</param>
+      <param name="TimeIntegrator">timeIntegrator</param>
+      <param name="VelocityField">VelocityField</param>
+      <param name="PeriodicBCsManager">periodicBCsManager</param>
+      <param name="allowFallbackToFirstOrder">True</param>
+    </struct>
+    <struct name="splittingRoutine">
+      <param name="Type">ReseedSplitting</param>
+      <param name="idealParticleCount">particlesPerCell</param>
+      <param name="originalParticleShape">bottomBoundaryShape</param>
+    </struct>
+    <struct name="solutionVelocity">
+      <param name="Type">SolutionVector</param>
+      <param name="FeVariable">VelocityField</param>
+    </struct>
+    <struct name="solutionPressure">
+      <param name="Type">SolutionVector</param>
+      <param name="FeVariable">PressureField</param>
+    </struct>
+    <struct name="mom_force">
+      <param name="Type">ForceVector</param>
+      <param name="FeVariable">VelocityField</param>
+      <param name="ExtraInfo">context</param>
+    </struct>
+    <struct name="cont_force">
+      <param name="Type">ForceVector</param>
+      <param name="FeVariable">PressureField</param>
+      <param name="ExtraInfo">context</param>
+    </struct>
+    <struct name="k_matrix">
+      <param name="Type">StiffnessMatrix</param>
+      <param name="RowVariable">VelocityField</param>
+      <param name="ColumnVariable">VelocityField</param>
+      <param name="RHS">mom_force</param>
+      <param name="allowZeroElementContributions">False</param>
+    </struct>
+    <struct name="constitutiveMatrix">
+      <param name="Type">ConstitutiveMatrixCartesian</param>
+      <param name="Swarm">picIntegrationPoints</param>
+      <param name="StiffnessMatrix">k_matrix</param>
+    </struct>
+    <struct name="g_matrix">
+      <param name="Type">StiffnessMatrix</param>
+      <param name="RowVariable">VelocityField</param>
+      <param name="ColumnVariable">PressureField</param>
+      <param name="RHS">cont_force</param>
+      <param name="allowZeroElementContributions">False</param>
+    </struct>
+    <struct name="gradientStiffnessMatrixTerm">
+      <param name="Type">GradientStiffnessMatrixTerm</param>
+      <param name="Swarm">gaussSwarm</param>
+      <param name="StiffnessMatrix">g_matrix</param>
+    </struct>
+    <struct name="preconditioner">
+      <param name="Type">StiffnessMatrix</param>
+      <param name="RowVariable">PressureField</param>
+      <param name="ColumnVariable">PressureField</param>
+      <param name="RHS">cont_force</param>
+      <param name="allowZeroElementContributions">True</param>
+    </struct>
+    <struct name="preconditionerTerm">
+      <param name="Type">UzawaPreconditionerTerm</param>
+      <param name="Swarm">picIntegrationPoints</param>
+      <param name="StiffnessMatrix">preconditioner</param>
+    </struct>
+    <struct name="uzawa">
+      <param name="Type">Stokes_SLE_UzawaSolver</param>
+      <param name="Preconditioner">preconditioner</param>
+      <param name="tolerance">1.0e-5</param>
+      <param name="maxIterations">5000</param>
+    </struct>
+    <struct name="stokesEqn">
+      <param name="Type">Stokes_SLE</param>
+      <param name="SLE_Solver">uzawa</param>
+      <param name="Context">context</param>
+      <param name="StressTensorMatrix">k_matrix</param>
+      <param name="GradientMatrix">g_matrix</param>
+      <param name="DivergenceMatrix"></param>
+      <param name="CompressibilityMatrix">c_matrix</param>
+      <param name="VelocityVector">solutionVelocity</param>
+      <param name="PressureVector">solutionPressure</param>
+      <param name="ForceVector">mom_force</param>
+      <param name="ContinuityForceVector">cont_force</param>
+      <param name="killNonConvergent">false</param>
+      <param name="nonLinearMaxIterations">nonLinearMaxIterations</param>
+      <param name="nonLinearTolerance">nonLinearTolerance</param>
+      <param name="makeConvergenceFile">false</param>
+    </struct>
+    <struct name="buoyancyForceTerm">
+      <param name="Type">BuoyancyForceTerm</param>
+      <param name="ForceVector">mom_force</param>
+      <param name="Swarm">picIntegrationPoints</param>
+      <param name="gravity">1.0</param>
+    </struct>
+    <struct name="background">
+      <param name="Type">Everywhere</param>
+    </struct>
+    <struct name="escapedRoutine">
+      <param name="Type">EscapedRoutine</param>
+      <param name="idealParticleCount">0</param>
+    </struct>
+    <struct name="velocityRemesher">
+      <param name="Type">StripRemesher</param>
+      <param name="mesh">mesh-linear</param>
+      <param name="meshType">regular</param>
+      <list name="dim">
+        <param>true</param>
+        <param>true</param>
+        <param>true</param>
+      </list>
+    </struct>
+    <struct name="pressureRemesher">
+      <param name="Type">CellRemesher</param>
+      <param name="mesh">mesh-constant</param>
+      <param name="meshType">regular</param>
+      <param name="dim">3</param>
+      <param name="cellMesh">mesh-linear</param>
+    </struct>
+
+    <struct name="bottomBoundaryShape">
+      <param name="Type">Box</param>
+      <param name="startX">minX</param>
+      <param name="endX">maxX</param>
+      <param name="startY">minY</param>
+      <param name="endY">0.05</param>
+      <param name="startZ">minZ</param>
+      <param name="endZ">maxZ</param>
+    </struct>
+
+    <struct name="boxShape">
+      <param name="Type">Box</param>
+      <param name="startX">minX</param>
+      <param name="endX">maxX</param>
+      <param name="startY">minY</param>
+      <param name="endY">maxY</param>
+      <param name="startZ">minZ</param>
+      <param name="endZ">maxZ</param>
+    </struct>
+    <struct name="backgroundViscosity">
+      <param name="Type">MaterialViscosity</param>
+      <param name="eta0">1.0</param>
+    </struct>
+    <struct name="storeViscosity">
+      <param name="Type">StoreVisc</param>
+      <param name="MaterialPointsSwarm">materialSwarm</param>
+    </struct>
+    <struct name="storeStress">
+      <param name="Type">StoreStress</param>
+      <param name="MaterialPointsSwarm">materialSwarm</param>
+    </struct>
+    <struct name="viscous">
+      <param name="Type">RheologyMaterial</param>
+      <param name="Shape">boxShape</param>
+      <param name="density">1.0</param>
+      <list name="Rheology">
+        <param>backgroundViscosity</param>
+        <param>storeViscosity</param>
+        <param>storeStress</param>
+      </list>
+    </struct>
+
+    <struct name="stressBC">
+      <param name="Type">StressBC</param>
+      <param name="ForceVector">mom_force</param>
+      <param name="Swarm">picIntegrationPoints</param>
+      <param name="wall">bottom</param>
+      <param name="y_type">double</param>
+      <param name="y_value">0.35</param>
+    </struct>
+
+  </struct>
+  <list name="plugins">
+    <param>Underworld_EulerDeform</param>
+    <param>Underworld_DumpSwarm</param>
+    <param>Underworld_VTKOutput</param>
+  </list>
+  <param name="maxTimeSteps">10</param>
+  <param name="outputEvery">1</param>
+  <param name="dumpEvery">1</param>
+  <param name="outputPath">./output.template</param>
+  <param name="dim">2</param>
+  <param name="shadowDepth">1</param>
+  <param name="minX">0.0f</param>
+  <param name="minY">0.0f</param>
+  <param name="minZ">0.0f</param>
+  <param name="maxX">2.0f</param>
+  <param name="maxY">0.35f</param>
+  <param name="maxZ">0.3f</param>
+  <param name="elementResI">32</param>
+  <param name="elementResJ">16</param>
+  <param name="elementResK">4</param>
+  <param name="allowUnbalancing">True</param>
+  <param name="buildNodeNeighbourTbl">True</param>
+  <param name="buildElementNeighbourTbl">True</param>
+  <param name="particlesPerCell">30</param>
+  <param name="seed">13</param>
+  <param name="gaussParticlesX">2</param>
+  <param name="gaussParticlesY">2</param>
+  <param name="gaussParticlesZ">2</param>
+  <param name="particlesPerCell">30</param>
+  <struct name="EulerDeform">
+    <list name="systems">
+      <struct>
+        <param name="mesh">mesh-constant</param>
+        <param name="remesher">pressureRemesher</param>
+        <param name="velocityField">VelocityField</param>
+        <list name="fields">
+          <struct>
+            <param name="field">PressureField</param>
+            <param name="variable">pressure</param>
+          </struct>
+        </list>
+      </struct>
+      <struct>
+        <param name="mesh">mesh-linear</param>
+        <param name="remesher">velocityRemesher</param>
+        <param name="velocityField">VelocityField</param>
+        <param name="wrapTop">True</param>
+        <param name="staticBottom">True</param>
+        <list name="fields">
+          <struct>
+            <param name="field">VelocityField</param>
+            <param name="variable">velocity</param>
+          </struct>
+        </list>
+      </struct>
+    </list>
+  </struct>
+  <struct name="velocityBCs">
+    <param name="type">CompositeVC</param>
+    <list name="vcList">
+      <struct>
+        <param name="type">WallVC</param>
+        <param name="wall">front</param>
+        <list name="variables">
+          <struct>
+            <param name="name">vz</param>
+            <param name="type">double</param>
+            <param name="value">0</param>
+          </struct>
+        </list>
+      </struct>
+      <struct>
+        <param name="type">WallVC</param>
+        <param name="wall">back</param>
+        <list name="variables">
+          <struct>
+            <param name="name">vz</param>
+            <param name="type">double</param>
+            <param name="value">0</param>
+          </struct>
+        </list>
+      </struct>
+      <struct>
+        <param name="type">WallVC</param>
+        <param name="wall">left</param>
+        <list name="variables">
+          <struct>
+            <param name="name">vx</param>
+            <param name="type">double</param>
+            <param name="value">0.0</param>
+          </struct>
+          <struct>
+            <param name="name">vy</param>
+            <param name="type">double</param>
+            <param name="value">0.0</param>
+          </struct>
+        </list>
+      </struct>
+      <struct>
+        <param name="type">WallVC</param>
+        <param name="wall">right</param>
+        <list name="variables">
+          <struct>
+            <param name="name">vx</param>
+            <param name="type">double</param>
+            <param name="value">1.0</param>
+          </struct>
+          <struct>
+            <param name="name">vy</param>
+            <param name="type">double</param>
+            <param name="value">0.0</param>
+          </struct>
+        </list>
+      </struct>
+    </list>
+  </struct>
+  <param name="checkpointEvery">1</param>
+</StGermainData>

Deleted: long/3D/Gale/trunk/input/cookbook/viscous_open_boundary.xml
===================================================================
--- long/3D/Gale/trunk/input/cookbook/viscous_open_boundary.xml	2007-06-25 09:18:26 UTC (rev 7472)
+++ long/3D/Gale/trunk/input/cookbook/viscous_open_boundary.xml	2007-06-25 10:06:14 UTC (rev 7473)
@@ -1,498 +0,0 @@
-<?xml version="1.0"?>
-<StGermainData xmlns="http://www.vpac.org/StGermain/XML_IO_Handler/Jun2003">
-  <struct name="components">
-    <struct name="conditionFunctions">
-      <param name="Type">StgFEM_StandardConditionFunctions</param>
-    </struct>
-    <struct name="mesh-constant">
-      <param name="Type">FeMesh</param>
-      <param name="elementType">constant</param>
-    </struct>
-    <struct name="constantMesh-generator">
-      <param name="Type">C0Generator</param>
-      <param name="mesh">mesh-constant</param>
-      <param name="elementMesh">mesh-linear</param>
-    </struct>
-    <struct name="mesh-linear">
-      <param name="Type">FeMesh</param>
-      <param name="elementType">linear</param>
-    </struct>
-    <struct name="linearMesh-generator">
-      <param name="Type">CartesianGenerator</param>
-      <param name="mesh">mesh-linear</param>
-      <param name="dim">dim</param>
-      <param name="shadowDepth">shadowDepth</param>
-      <list name="size">
-        <param>elementResI</param>
-        <param>elementResJ</param>
-        <param>elementResK</param>
-      </list>
-      <list name="minCoord">
-        <param>minX</param>
-        <param>minY</param>
-        <param>minZ</param>
-      </list>
-      <list name="maxCoord">
-        <param>maxX</param>
-        <param>maxY</param>
-        <param>maxZ</param>
-      </list>
-    </struct>
-    <struct name="velocity">
-      <param name="Type">MeshVariable</param>
-      <param name="mesh">mesh-linear</param>
-      <param name="Rank">Vector</param>
-      <param name="DataType">Double</param>
-      <param name="VectorComponentCount">dim</param>
-      <list name="names">
-        <param>vx</param>
-        <param>vy</param>
-        <param>vz</param>
-      </list>
-    </struct>
-    <struct name="velocityBCs">
-      <param name="Type">CompositeVC</param>
-      <param name="Data">mesh-linear</param>
-    </struct>
-    <struct name="velocityICs">
-      <param name="Type">CompositeVC</param>
-      <param name="Data">mesh-linear</param>
-    </struct>
-    <struct name="velocityDofLayout">
-      <param name="Type">DofLayout</param>
-      <param name="mesh">mesh-linear</param>
-      <param name="BaseVariableCount">dim</param>
-      <list name="BaseVariables">
-        <param>vx</param>
-        <param>vy</param>
-        <param>vz</param>
-      </list>
-    </struct>
-    <struct name="VelocityField">
-      <param name="Type">FeVariable</param>
-      <param name="FEMesh">mesh-linear</param>
-      <param name="DofLayout">velocityDofLayout</param>
-      <param name="BC">velocityBCs</param>
-      <param name="IC">velocityICs</param>
-      <param name="LinkedDofInfo">velocityLinkedDofs</param>
-    </struct>
-    <struct name="VelocityMagnitudeField">
-      <param name="Type">OperatorFeVariable</param>
-      <param name="Operator">Magnitude</param>
-      <param name="FeVariable">VelocityField</param>
-    </struct>
-    <struct name="VelocityGradientsField">
-      <param name="Type">OperatorFeVariable</param>
-      <param name="Operator">Gradient</param>
-      <param name="FeVariable">VelocityField</param>
-    </struct>
-    <struct name="VelocityGradientsInvariantField">
-      <param name="Type">OperatorFeVariable</param>
-      <param name="Operator">TensorInvariant</param>
-      <param name="FeVariable">VelocityGradientsField</param>
-    </struct>
-    <struct name="StrainRateField">
-      <param name="Type">OperatorFeVariable</param>
-      <param name="Operator">TensorSymmetricPart</param>
-      <param name="FeVariable">VelocityGradientsField</param>
-    </struct>
-    <struct name="VorticityField">
-      <param name="Type">OperatorFeVariable</param>
-      <param name="Operator">TensorAntisymmetricPart</param>
-      <param name="FeVariable">VelocityGradientsField</param>
-    </struct>
-    <struct name="StrainRateInvariantField">
-      <param name="Type">OperatorFeVariable</param>
-      <param name="Operator">SymmetricTensor_Invariant</param>
-      <param name="FeVariable">StrainRateField</param>
-    </struct>
-    <struct name="pressure">
-      <param name="Type">MeshVariable</param>
-      <param name="mesh">mesh-constant</param>
-      <param name="Rank">Scalar</param>
-      <param name="DataType">Double</param>
-    </struct>
-    <struct name="pressureDofLayout">
-      <param name="Type">DofLayout</param>
-      <param name="mesh">mesh-constant</param>
-      <list name="BaseVariables">
-        <param>pressure</param>
-      </list>
-    </struct>
-    <struct name="PressureField">
-      <param name="Type">FeVariable</param>
-      <param name="FEMesh">mesh-constant</param>
-      <param name="DofLayout">pressureDofLayout</param>
-      <param name="LinkedDofInfo">pressureLinkedDofs</param>
-    </struct>
-    <struct name="cellLayout">
-      <param name="Type">SingleCellLayout</param>
-    </struct>
-    <struct name="particleLayout">
-      <param name="Type">GaussParticleLayout</param>
-    </struct>
-    <struct name="gaussSwarm">
-      <param name="Type">IntegrationPointsSwarm</param>
-      <param name="CellLayout">cellLayout</param>
-      <param name="ParticleLayout">particleLayout</param>
-      <param name="FeMesh">mesh-linear</param>
-      <param name="TimeIntegrator">timeIntegrator</param>
-      <param name="IntegrationPointMapper">gaussMapper</param>
-    </struct>
-    <struct name="gaussMapper">
-      <param name="Type">GaussMapper</param>
-      <param name="IntegrationPointsSwarm">gaussSwarm</param>
-      <param name="MaterialPointsSwarm">gaussMaterialSwarm</param>
-    </struct>
-    <struct name="backgroundLayout">
-      <param name="Type">BackgroundParticleLayout</param>
-    </struct>
-    <struct name="gaussMaterialSwarm">
-      <param name="Type">MaterialPointsSwarm</param>
-      <param name="CellLayout">cellLayout</param>
-      <param name="ParticleLayout">backgroundLayout</param>
-      <param name="FeMesh">mesh-linear</param>
-    </struct>
-    <struct name="timeIntegrator">
-      <param name="Type">TimeIntegrator</param>
-      <param name="order">1</param>
-      <param name="simultaneous">t</param>
-      <param name="Context">context</param>
-    </struct>
-    <struct name="elementCellLayout">
-      <param name="Type">ElementCellLayout</param>
-      <param name="Mesh">mesh-linear</param>
-    </struct>
-    <struct name="weights">
-      <param name="Type">PCDVC</param>
-      <param name="resolutionX">10</param>
-      <param name="resolutionY">10</param>
-      <param name="resolutionZ">10</param>
-      <param name="lowerT">0.6</param>
-      <param name="upperT">25</param>
-      <param name="maxDeletions">3</param>
-      <param name="maxSplits">3</param>
-      <param name="MaterialPointsSwarm">materialSwarm</param>
-    </struct>
-    <struct name="localLayout">
-      <param name="Type">MappedParticleLayout</param>
-    </struct>
-    <struct name="picIntegrationPoints">
-      <param name="Type">IntegrationPointsSwarm</param>
-      <param name="CellLayout">elementCellLayout</param>
-      <param name="ParticleLayout">localLayout</param>
-      <param name="FeMesh">mesh-linear</param>
-      <param name="WeightsCalculator">weights</param>
-      <param name="TimeIntegrator">timeIntegrator</param>
-      <param name="IntegrationPointMapper">mapper</param>
-    </struct>
-    <struct name="mapper">
-      <param name="Type">CoincidentMapper</param>
-      <param name="IntegrationPointsSwarm">picIntegrationPoints</param>
-      <param name="MaterialPointsSwarm">materialSwarm</param>
-    </struct>
-    <struct name="materialSwarmParticleLayout">
-      <param name="Type">MeshParticleLayout</param>
-      <param name="mesh">mesh-linear</param>
-      <param name="cellParticleCount">particlesPerCell</param>
-    </struct>
-    <struct name="materialSwarm">
-      <param name="Type">MaterialPointsSwarm</param>
-      <param name="CellLayout">elementCellLayout</param>
-      <param name="ParticleLayout">materialSwarmParticleLayout</param>
-      <param name="FeMesh">mesh-linear</param>
-      <param name="SplittingRoutine">splittingRoutine</param>
-      <param name="RemovalRoutine">removalRoutine</param>
-      <param name="EscapedRoutine">escapedRoutine</param>
-    </struct>
-    <struct name="materialSwarmAdvector">
-      <param name="Type">SwarmAdvector</param>
-      <param name="Swarm">materialSwarm</param>
-      <param name="TimeIntegrator">timeIntegrator</param>
-      <param name="VelocityField">VelocityField</param>
-      <param name="PeriodicBCsManager">periodicBCsManager</param>
-      <param name="allowFallbackToFirstOrder">True</param>
-    </struct>
-    <struct name="splittingRoutine">
-      <param name="Type">ReseedSplitting</param>
-      <param name="idealParticleCount">particlesPerCell</param>
-      <param name="originalParticleShape">bottomBoundaryShape</param>
-    </struct>
-    <struct name="solutionVelocity">
-      <param name="Type">SolutionVector</param>
-      <param name="FeVariable">VelocityField</param>
-    </struct>
-    <struct name="solutionPressure">
-      <param name="Type">SolutionVector</param>
-      <param name="FeVariable">PressureField</param>
-    </struct>
-    <struct name="mom_force">
-      <param name="Type">ForceVector</param>
-      <param name="FeVariable">VelocityField</param>
-      <param name="ExtraInfo">context</param>
-    </struct>
-    <struct name="cont_force">
-      <param name="Type">ForceVector</param>
-      <param name="FeVariable">PressureField</param>
-      <param name="ExtraInfo">context</param>
-    </struct>
-    <struct name="k_matrix">
-      <param name="Type">StiffnessMatrix</param>
-      <param name="RowVariable">VelocityField</param>
-      <param name="ColumnVariable">VelocityField</param>
-      <param name="RHS">mom_force</param>
-      <param name="allowZeroElementContributions">False</param>
-    </struct>
-    <struct name="constitutiveMatrix">
-      <param name="Type">ConstitutiveMatrixCartesian</param>
-      <param name="Swarm">picIntegrationPoints</param>
-      <param name="StiffnessMatrix">k_matrix</param>
-    </struct>
-    <struct name="g_matrix">
-      <param name="Type">StiffnessMatrix</param>
-      <param name="RowVariable">VelocityField</param>
-      <param name="ColumnVariable">PressureField</param>
-      <param name="RHS">cont_force</param>
-      <param name="allowZeroElementContributions">False</param>
-    </struct>
-    <struct name="gradientStiffnessMatrixTerm">
-      <param name="Type">GradientStiffnessMatrixTerm</param>
-      <param name="Swarm">gaussSwarm</param>
-      <param name="StiffnessMatrix">g_matrix</param>
-    </struct>
-    <struct name="preconditioner">
-      <param name="Type">StiffnessMatrix</param>
-      <param name="RowVariable">PressureField</param>
-      <param name="ColumnVariable">PressureField</param>
-      <param name="RHS">cont_force</param>
-      <param name="allowZeroElementContributions">True</param>
-    </struct>
-    <struct name="preconditionerTerm">
-      <param name="Type">UzawaPreconditionerTerm</param>
-      <param name="Swarm">picIntegrationPoints</param>
-      <param name="StiffnessMatrix">preconditioner</param>
-    </struct>
-    <struct name="uzawa">
-      <param name="Type">Stokes_SLE_UzawaSolver</param>
-      <param name="Preconditioner">preconditioner</param>
-      <param name="tolerance">1.0e-5</param>
-      <param name="maxIterations">5000</param>
-    </struct>
-    <struct name="stokesEqn">
-      <param name="Type">Stokes_SLE</param>
-      <param name="SLE_Solver">uzawa</param>
-      <param name="Context">context</param>
-      <param name="StressTensorMatrix">k_matrix</param>
-      <param name="GradientMatrix">g_matrix</param>
-      <param name="DivergenceMatrix"></param>
-      <param name="CompressibilityMatrix">c_matrix</param>
-      <param name="VelocityVector">solutionVelocity</param>
-      <param name="PressureVector">solutionPressure</param>
-      <param name="ForceVector">mom_force</param>
-      <param name="ContinuityForceVector">cont_force</param>
-      <param name="killNonConvergent">false</param>
-      <param name="nonLinearMaxIterations">nonLinearMaxIterations</param>
-      <param name="nonLinearTolerance">nonLinearTolerance</param>
-      <param name="makeConvergenceFile">false</param>
-    </struct>
-    <struct name="buoyancyForceTerm">
-      <param name="Type">BuoyancyForceTerm</param>
-      <param name="ForceVector">mom_force</param>
-      <param name="Swarm">picIntegrationPoints</param>
-      <param name="gravity">1.0</param>
-    </struct>
-    <struct name="background">
-      <param name="Type">Everywhere</param>
-    </struct>
-    <struct name="escapedRoutine">
-      <param name="Type">EscapedRoutine</param>
-      <param name="idealParticleCount">0</param>
-    </struct>
-    <struct name="velocityRemesher">
-      <param name="Type">StripRemesher</param>
-      <param name="mesh">mesh-linear</param>
-      <param name="meshType">regular</param>
-      <list name="dim">
-        <param>true</param>
-        <param>true</param>
-        <param>true</param>
-      </list>
-    </struct>
-    <struct name="pressureRemesher">
-      <param name="Type">CellRemesher</param>
-      <param name="mesh">mesh-constant</param>
-      <param name="meshType">regular</param>
-      <param name="dim">3</param>
-      <param name="cellMesh">mesh-linear</param>
-    </struct>
-
-    <struct name="bottomBoundaryShape">
-      <param name="Type">Box</param>
-      <param name="startX">minX</param>
-      <param name="endX">maxX</param>
-      <param name="startY">minY</param>
-      <param name="endY">0.05</param>
-      <param name="startZ">minZ</param>
-      <param name="endZ">maxZ</param>
-    </struct>
-
-    <struct name="boxShape">
-      <param name="Type">Box</param>
-      <param name="startX">minX</param>
-      <param name="endX">maxX</param>
-      <param name="startY">minY</param>
-      <param name="endY">maxY</param>
-      <param name="startZ">minZ</param>
-      <param name="endZ">maxZ</param>
-    </struct>
-    <struct name="backgroundViscosity">
-      <param name="Type">MaterialViscosity</param>
-      <param name="eta0">1.0</param>
-    </struct>
-    <struct name="storeViscosity">
-      <param name="Type">StoreVisc</param>
-      <param name="MaterialPointsSwarm">materialSwarm</param>
-    </struct>
-    <struct name="storeStress">
-      <param name="Type">StoreStress</param>
-      <param name="MaterialPointsSwarm">materialSwarm</param>
-    </struct>
-    <struct name="viscous">
-      <param name="Type">RheologyMaterial</param>
-      <param name="Shape">boxShape</param>
-      <param name="density">1.0</param>
-      <list name="Rheology">
-        <param>backgroundViscosity</param>
-        <param>storeViscosity</param>
-        <param>storeStress</param>
-      </list>
-    </struct>
-
-    <struct name="stressBC">
-      <param name="Type">StressBC</param>
-      <param name="ForceVector">mom_force</param>
-      <param name="Swarm">picIntegrationPoints</param>
-      <param name="wall">bottom</param>
-      <param name="y_type">double</param>
-      <param name="y_value">0.35</param>
-    </struct>
-
-  </struct>
-  <list name="plugins">
-    <param>Underworld_EulerDeform</param>
-    <param>Underworld_DumpSwarm</param>
-    <param>Underworld_VTKOutput</param>
-  </list>
-  <param name="maxTimeSteps">10</param>
-  <param name="outputEvery">1</param>
-  <param name="dumpEvery">1</param>
-  <param name="outputPath">./output.template</param>
-  <param name="dim">2</param>
-  <param name="shadowDepth">1</param>
-  <param name="minX">0.0f</param>
-  <param name="minY">0.0f</param>
-  <param name="minZ">0.0f</param>
-  <param name="maxX">2.0f</param>
-  <param name="maxY">0.35f</param>
-  <param name="maxZ">0.3f</param>
-  <param name="elementResI">32</param>
-  <param name="elementResJ">16</param>
-  <param name="elementResK">4</param>
-  <param name="allowUnbalancing">True</param>
-  <param name="buildNodeNeighbourTbl">True</param>
-  <param name="buildElementNeighbourTbl">True</param>
-  <param name="particlesPerCell">30</param>
-  <param name="seed">13</param>
-  <param name="gaussParticlesX">2</param>
-  <param name="gaussParticlesY">2</param>
-  <param name="gaussParticlesZ">2</param>
-  <param name="particlesPerCell">30</param>
-  <struct name="EulerDeform">
-    <list name="systems">
-      <struct>
-        <param name="mesh">mesh-constant</param>
-        <param name="remesher">pressureRemesher</param>
-        <param name="velocityField">VelocityField</param>
-        <list name="fields">
-          <struct>
-            <param name="field">PressureField</param>
-            <param name="variable">pressure</param>
-          </struct>
-        </list>
-      </struct>
-      <struct>
-        <param name="mesh">mesh-linear</param>
-        <param name="remesher">velocityRemesher</param>
-        <param name="velocityField">VelocityField</param>
-        <param name="wrapTop">True</param>
-        <param name="staticBottom">True</param>
-        <list name="fields">
-          <struct>
-            <param name="field">VelocityField</param>
-            <param name="variable">velocity</param>
-          </struct>
-        </list>
-      </struct>
-    </list>
-  </struct>
-  <struct name="velocityBCs">
-    <param name="type">CompositeVC</param>
-    <list name="vcList">
-      <struct>
-        <param name="type">WallVC</param>
-        <param name="wall">front</param>
-        <list name="variables">
-          <struct>
-            <param name="name">vz</param>
-            <param name="type">double</param>
-            <param name="value">0</param>
-          </struct>
-        </list>
-      </struct>
-      <struct>
-        <param name="type">WallVC</param>
-        <param name="wall">back</param>
-        <list name="variables">
-          <struct>
-            <param name="name">vz</param>
-            <param name="type">double</param>
-            <param name="value">0</param>
-          </struct>
-        </list>
-      </struct>
-      <struct>
-        <param name="type">WallVC</param>
-        <param name="wall">left</param>
-        <list name="variables">
-          <struct>
-            <param name="name">vx</param>
-            <param name="type">double</param>
-            <param name="value">0.0</param>
-          </struct>
-          <struct>
-            <param name="name">vy</param>
-            <param name="type">double</param>
-            <param name="value">0.0</param>
-          </struct>
-        </list>
-      </struct>
-      <struct>
-        <param name="type">WallVC</param>
-        <param name="wall">right</param>
-        <list name="variables">
-          <struct>
-            <param name="name">vx</param>
-            <param name="type">double</param>
-            <param name="value">1.0</param>
-          </struct>
-          <struct>
-            <param name="name">vy</param>
-            <param name="type">double</param>
-            <param name="value">0.0</param>
-          </struct>
-        </list>
-      </struct>
-    </list>
-  </struct>
-  <param name="checkpointEvery">1</param>
-</StGermainData>



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