[cig-commits] r11300 - in short/3D/PyLith/trunk/unittests/libtests/bc: . data
brad at geodynamics.org
brad at geodynamics.org
Sat Mar 1 21:25:22 PST 2008
Author: brad
Date: 2008-03-01 21:25:22 -0800 (Sat, 01 Mar 2008)
New Revision: 11300
Added:
short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMesh.cc
short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMesh.hh
short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMeshTri3.cc
short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMeshTri3.hh
short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshData.cc
short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshData.hh
short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshDataTri3.cc
short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshDataTri3.hh
Modified:
short/3D/PyLith/trunk/unittests/libtests/bc/Makefile.am
short/3D/PyLith/trunk/unittests/libtests/bc/data/tri3.mesh
Log:
Started work on unit tests for submesh().
Modified: short/3D/PyLith/trunk/unittests/libtests/bc/Makefile.am
===================================================================
--- short/3D/PyLith/trunk/unittests/libtests/bc/Makefile.am 2008-03-02 05:24:22 UTC (rev 11299)
+++ short/3D/PyLith/trunk/unittests/libtests/bc/Makefile.am 2008-03-02 05:25:22 UTC (rev 11300)
@@ -28,6 +28,8 @@
TestAbsorbingDampersTet4.cc \
TestAbsorbingDampersHex8.cc \
TestBoundaryCondition.cc \
+ TestBoundaryMesh.cc \
+ TestBoundaryMeshTri3.cc \
TestDirichletBoundary.cc \
TestDirichletBoundaryTri3.cc \
TestDirichletBoundaryQuad4.cc \
@@ -60,6 +62,8 @@
TestAbsorbingDampersTet4.hh \
TestAbsorbingDampersHex8.hh \
TestBoundaryCondition.hh \
+ TestBoundaryMesh.hh \
+ TestBoundaryMeshTri3.hh \
TestDirichletBoundary.hh \
TestDirichletBoundaryTri3.hh \
TestDirichletBoundaryQuad4.hh \
@@ -91,6 +95,8 @@
data/AbsorbingDampersDataQuad4.cc \
data/AbsorbingDampersDataTet4.cc \
data/AbsorbingDampersDataHex8.cc \
+ data/BoundaryMeshData.cc \
+ data/BoundaryMeshDataTri3.cc \
data/DirichletData.cc \
data/DirichletDataLine2.cc \
data/DirichletDataLine2b.cc \
@@ -114,6 +120,8 @@
data/AbsorbingDampersDataQuad4.hh \
data/AbsorbingDampersDataTet4.hh \
data/AbsorbingDampersDataHex8.hh \
+ data/BoundaryMeshData.hh \
+ data/BoundaryMeshDataTri3.hh \
data/DirichletData.hh \
data/DirichletDataLine2.hh \
data/DirichletDataLine2b.hh \
Added: short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMesh.cc
===================================================================
--- short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMesh.cc (rev 0)
+++ short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMesh.cc 2008-03-02 05:25:22 UTC (rev 11300)
@@ -0,0 +1,170 @@
+// -*- C++ -*-
+//
+// ----------------------------------------------------------------------
+//
+// Brad T. Aagaard
+// U.S. Geological Survey
+//
+// {LicenseText}
+//
+// ----------------------------------------------------------------------
+//
+
+#include <portinfo>
+
+#include "TestBoundaryMesh.hh" // Implementation of class methods
+
+#include <Selection.hh> // USES submesh algorithms
+
+#include "data/BoundaryMeshData.hh" // USES BoundaryMeshData
+
+#include "pylith/meshio/MeshIOAscii.hh" // USES MeshIOAscii
+#include "pylith/faults/FaultCohesiveKin.hh" // USES FaultsCohesiveKin
+
+#include "pylith/utils/sievetypes.hh" // USES PETSc Mesh
+
+// ----------------------------------------------------------------------
+// Setup testing data.
+void
+pylith::bc::TestBoundaryMesh::setUp(void)
+{ // setUp
+ _data = 0;
+} // setUp
+
+// ----------------------------------------------------------------------
+// Tear down testing data.
+void
+pylith::bc::TestBoundaryMesh::tearDown(void)
+{ // tearDown
+ delete _data; _data = 0;
+} // tearDown
+
+// ----------------------------------------------------------------------
+// Test submesh() without fault.
+void
+pylith::bc::TestBoundaryMesh::testSubmesh(void)
+{ // testSubmesh
+ CPPUNIT_ASSERT(0 != _data);
+
+ ALE::Obj<Mesh> mesh;
+
+ meshio::MeshIOAscii iohandler;
+ iohandler.filename(_data->filename);
+ iohandler.read(&mesh);
+ CPPUNIT_ASSERT(!mesh.isNull());
+
+ const char* label = _data->bcLabel;
+ const ALE::Obj<Mesh>& subMesh =
+ ALE::Selection<ALE::Mesh>::submesh(mesh, mesh->getIntSection(label));
+ CPPUNIT_ASSERT(!subMesh.isNull());
+
+ subMesh->view("SUBMESH WITHOUT FAULT");
+
+ const ALE::Obj<Mesh::label_sequence>& vertices = subMesh->depthStratum(0);
+ const Mesh::label_sequence::iterator verticesEnd = vertices->end();
+
+ CPPUNIT_ASSERT_EQUAL(_data->numVerticesNoFault, int(vertices->size()));
+
+ int ipt = 0;
+ for (Mesh::label_sequence::iterator v_iter=vertices->begin();
+ v_iter != verticesEnd;
+ ++v_iter, ++ipt)
+ CPPUNIT_ASSERT_EQUAL(_data->verticesNoFault[ipt], *v_iter);
+
+ const ALE::Obj<Mesh::label_sequence>& cells = subMesh->heightStratum(1);
+ const Mesh::label_sequence::iterator cellsEnd = cells->end();
+ const ALE::Obj<sieve_type>& sieve = subMesh->getSieve();
+ assert(!sieve.isNull());
+ typedef ALE::SieveAlg<Mesh> SieveAlg;
+
+ CPPUNIT_ASSERT_EQUAL(_data->numCells, int(cells->size()));
+
+ int icell = 0;
+ int index = 0;
+ for (Mesh::label_sequence::iterator c_iter=cells->begin();
+ c_iter != cellsEnd;
+ ++c_iter, ++icell) {
+ const int depth = 1;
+ const ALE::Obj<SieveAlg::coneArray>& cone =
+ SieveAlg::nCone(subMesh, *c_iter, depth);
+ assert(!cone.isNull());
+ const SieveAlg::coneArray::iterator vEnd = cone->end();
+
+ CPPUNIT_ASSERT_EQUAL(_data->numCorners, int(cone->size()));
+
+ int ivertex = 0;
+ for(SieveAlg::coneArray::iterator v_iter=cone->begin();
+ v_iter != vEnd;
+ ++v_iter, ++ivertex, ++index)
+ CPPUNIT_ASSERT_EQUAL(_data->cellsNoFault[index], *v_iter);
+ } // for
+} // testSubmesh
+
+// ----------------------------------------------------------------------
+// Test submesh() with fault.
+void
+pylith::bc::TestBoundaryMesh::testSubmeshFault(void)
+{ // testSubmeshFault
+ CPPUNIT_ASSERT(0 != _data);
+
+ ALE::Obj<Mesh> mesh;
+
+ meshio::MeshIOAscii iohandler;
+ iohandler.filename(_data->filename);
+ iohandler.read(&mesh);
+ CPPUNIT_ASSERT(!mesh.isNull());
+
+ faults::FaultCohesiveKin fault;
+ fault.label(_data->faultLabel);
+ fault.id(_data->faultId);
+ fault.adjustTopology(mesh);
+
+ const char* label = _data->bcLabel;
+ const ALE::Obj<Mesh>& subMesh =
+ ALE::Selection<ALE::Mesh>::submesh(mesh, mesh->getIntSection(label));
+ CPPUNIT_ASSERT(!subMesh.isNull());
+
+ subMesh->view("SUBMESH WITH FAULT");
+
+ const ALE::Obj<Mesh::label_sequence>& vertices = subMesh->depthStratum(0);
+ const Mesh::label_sequence::iterator verticesEnd = vertices->end();
+
+ CPPUNIT_ASSERT_EQUAL(_data->numVerticesFault, int(vertices->size()));
+
+ int ipt = 0;
+ for (Mesh::label_sequence::iterator v_iter=vertices->begin();
+ v_iter != verticesEnd;
+ ++v_iter, ++ipt)
+ CPPUNIT_ASSERT_EQUAL(_data->verticesFault[ipt], *v_iter);
+
+ const ALE::Obj<Mesh::label_sequence>& cells = subMesh->depthStratum(1);
+ const Mesh::label_sequence::iterator cellsEnd = cells->end();
+ const ALE::Obj<sieve_type>& sieve = subMesh->getSieve();
+ assert(!sieve.isNull());
+ const int depth = 1;
+ typedef ALE::SieveAlg<Mesh> SieveAlg;
+
+ CPPUNIT_ASSERT_EQUAL(_data->numCells, int(cells->size()));
+
+ int icell = 0;
+ int index = 0;
+ for (Mesh::label_sequence::iterator c_iter=cells->begin();
+ c_iter != cellsEnd;
+ ++c_iter, ++icell) {
+ const ALE::Obj<SieveAlg::coneArray>& cone =
+ SieveAlg::nCone(subMesh, *c_iter, depth);
+ assert(!cone.isNull());
+ const SieveAlg::coneArray::iterator vEnd = cone->end();
+
+ CPPUNIT_ASSERT_EQUAL(_data->numCorners, int(cone->size()));
+
+ int ivertex = 0;
+ for(SieveAlg::coneArray::iterator v_iter=cone->begin();
+ v_iter != vEnd;
+ ++v_iter, ++ivertex, ++index)
+ CPPUNIT_ASSERT_EQUAL(_data->cellsFault[index], *v_iter);
+ } // for
+} // testSubmeshFault
+
+
+// End of file
Added: short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMesh.hh
===================================================================
--- short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMesh.hh (rev 0)
+++ short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMesh.hh 2008-03-02 05:25:22 UTC (rev 11300)
@@ -0,0 +1,64 @@
+// -*- C++ -*-
+//
+// ----------------------------------------------------------------------
+//
+// Brad T. Aagaard
+// U.S. Geological Survey
+//
+// {LicenseText}
+//
+// ----------------------------------------------------------------------
+//
+
+/**
+ * @file unittests/libtests/bc/TestBoundaryMesh.hh
+ *
+ * @brief C++ TestBoundaryMesh object.
+ *
+ * C++ unit testing for BoundaryMesh.
+ */
+
+#if !defined(pylith_bc_testboundarymesh_hh)
+#define pylith_bc_testboundarymesh_hh
+
+#include <cppunit/extensions/HelperMacros.h>
+
+/// Namespace for pylith package
+namespace pylith {
+ namespace bc {
+ class TestBoundaryMesh;
+
+ class BoundaryMeshData;
+ } // bc
+} // pylith
+
+/// C++ unit testing for BoundaryMesh.
+class pylith::bc::TestBoundaryMesh : public CppUnit::TestFixture
+{ // class TestBoundaryMesh
+
+ // PUBLIC METHODS /////////////////////////////////////////////////////
+public :
+
+ /// Setup testing data.
+ void setUp(void);
+
+ /// Tear down testing data.
+ void tearDown(void);
+
+ /// Test submesh() without fault.
+ void testSubmesh(void);
+
+ /// Test submesh() with fault().
+ void testSubmeshFault(void);
+
+ // PROTECTED MEMBERS //////////////////////////////////////////////////
+protected :
+
+ BoundaryMeshData* _data; ///< Data for testing
+
+}; // class TestBoundaryMesh
+
+#endif // pylith_bc_boundarymesh_hh
+
+
+// End of file
Added: short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMeshTri3.cc
===================================================================
--- short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMeshTri3.cc (rev 0)
+++ short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMeshTri3.cc 2008-03-02 05:25:22 UTC (rev 11300)
@@ -0,0 +1,31 @@
+// -*- C++ -*-
+//
+// ----------------------------------------------------------------------
+//
+// Brad T. Aagaard
+// U.S. Geological Survey
+//
+// {LicenseText}
+//
+// ----------------------------------------------------------------------
+//
+
+#include <portinfo>
+
+#include "TestBoundaryMeshTri3.hh" // Implementation of class methods
+
+#include "data/BoundaryMeshDataTri3.hh" // USES BoundaryMeshDataTri3
+
+// ----------------------------------------------------------------------
+CPPUNIT_TEST_SUITE_REGISTRATION( pylith::bc::TestBoundaryMeshTri3 );
+
+// ----------------------------------------------------------------------
+// Setup testing data.
+void
+pylith::bc::TestBoundaryMeshTri3::setUp(void)
+{ // setUp
+ _data = new BoundaryMeshDataTri3();
+} // setUp
+
+
+// End of file
Added: short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMeshTri3.hh
===================================================================
--- short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMeshTri3.hh (rev 0)
+++ short/3D/PyLith/trunk/unittests/libtests/bc/TestBoundaryMeshTri3.hh 2008-03-02 05:25:22 UTC (rev 11300)
@@ -0,0 +1,56 @@
+// -*- C++ -*-
+//
+// ----------------------------------------------------------------------
+//
+// Brad T. Aagaard
+// U.S. Geological Survey
+//
+// {LicenseText}
+//
+// ----------------------------------------------------------------------
+//
+
+/**
+ * @file unittests/libtests/bc/TestBoundaryMeshTri3.hh
+ *
+ * @brief C++ TestBoundaryMesh object.
+ *
+ * C++ unit testing of submesh() for mesh with 2-D tri cells.
+ */
+
+#if !defined(pylith_bc_testboundarymeshtri3_hh)
+#define pylith_bc_testboundarymeshtri3_hh
+
+#include "TestBoundaryMesh.hh" // ISA TestBoundaryMesh
+
+/// Namespace for pylith package
+namespace pylith {
+ namespace bc {
+ class TestBoundaryMeshTri3;
+ } // bc
+} // pylith
+
+/// C++ unit testing of submesh() for mesh with 2-D tri cells.
+class pylith::bc::TestBoundaryMeshTri3 : public TestBoundaryMesh
+{ // class TestBoundaryMesh
+
+ // CPPUNIT TEST SUITE /////////////////////////////////////////////////
+ CPPUNIT_TEST_SUITE(TestBoundaryMeshTri3);
+
+ CPPUNIT_TEST( testSubmesh );
+ CPPUNIT_TEST( testSubmeshFault );
+
+ CPPUNIT_TEST_SUITE_END();
+
+ // PUBLIC METHODS /////////////////////////////////////////////////////
+public :
+
+ /// Setup testing data.
+ void setUp(void);
+
+}; // class TestBoundaryMeshTri3
+
+#endif // pylith_bc_boundarymeshtri3_hh
+
+
+// End of file
Added: short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshData.cc
===================================================================
--- short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshData.cc (rev 0)
+++ short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshData.cc 2008-03-02 05:25:22 UTC (rev 11300)
@@ -0,0 +1,36 @@
+// -*- C++ -*-
+//
+// ======================================================================
+//
+// Brad T. Aagaard
+// U.S. Geological Survey
+//
+// {LicenseText}
+//
+// ======================================================================
+//
+
+#include "BoundaryMeshData.hh"
+
+// ----------------------------------------------------------------------
+// Constructor
+pylith::bc::BoundaryMeshData::BoundaryMeshData(void) :
+ filename(0),
+ bcLabel(0),
+ faultLabel(0),
+ faultId(0),
+ verticesNoFault(0),
+ cellsNoFault(0),
+ verticesFault(0),
+ cellsFault(0)
+{ // constructor
+} // constructor
+
+// ----------------------------------------------------------------------
+// Destructor
+pylith::bc::BoundaryMeshData::~BoundaryMeshData(void)
+{ // destructor
+} // destructor
+
+
+// End of file
Added: short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshData.hh
===================================================================
--- short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshData.hh (rev 0)
+++ short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshData.hh 2008-03-02 05:25:22 UTC (rev 11300)
@@ -0,0 +1,64 @@
+// -*- C++ -*-
+//
+// ======================================================================
+//
+// Brad T. Aagaard
+// U.S. Geological Survey
+//
+// {LicenseText}
+//
+// ======================================================================
+//
+
+#if !defined(pylith_bc_boundarymeshdata_hh)
+#define pylith_bc_boundarymeshdata_hh
+
+namespace pylith {
+ namespace bc {
+ class BoundaryMeshData;
+ } // pylith
+} // bc
+
+class pylith::bc::BoundaryMeshData
+{
+
+// PUBLIC METHODS ///////////////////////////////////////////////////////
+public :
+
+ /// Constructor
+ BoundaryMeshData(void);
+
+ /// Destructor
+ ~BoundaryMeshData(void);
+
+// PUBLIC MEMBERS ///////////////////////////////////////////////////////
+public:
+
+ char* filename; ///< Name of file with input mesh.
+ char* bcLabel; ///< Name of group of vertices for bc.
+ char* faultLabel; ///< Name of group of vertices for fault.
+ int faultId; ///< Material identifier for fault.
+
+ int numCorners; ///< Number of vertices in cells of boundary mesh.
+ int numCells; ///< Number of cells in boundary mesh.
+
+ /// @name Boundary mesh without fault.
+ //@{
+ int numVerticesNoFault; ///< Number of vertices.
+ int* verticesNoFault; ///< Array of vertex labels.
+ int* cellsNoFault; ///< Array of vertex labels for cells.
+ //@}
+
+ /// @name Boundary mesh without fault.
+ //@{
+ int numVerticesFault; ///< Number of vertices.
+ int* verticesFault; ///< Array of vertex labels.
+ int* cellsFault; ///< Array of vertex labels for cells.
+ //@}
+
+};
+
+#endif // pylith_bc_boundarymeshdata_hh
+
+
+// End of file
Added: short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshDataTri3.cc
===================================================================
--- short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshDataTri3.cc (rev 0)
+++ short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshDataTri3.cc 2008-03-02 05:25:22 UTC (rev 11300)
@@ -0,0 +1,66 @@
+// -*- C++ -*-
+//
+// ======================================================================
+//
+// Brad T. Aagaard
+// U.S. Geological Survey
+//
+// {LicenseText}
+//
+// ======================================================================
+//
+
+#include "BoundaryMeshDataTri3.hh"
+
+const char* pylith::bc::BoundaryMeshDataTri3::_filename = "data/tri3.mesh";
+
+const char* pylith::bc::BoundaryMeshDataTri3::_bcLabel = "bc";
+
+const char* pylith::bc::BoundaryMeshDataTri3::_faultLabel = "fault";
+const int pylith::bc::BoundaryMeshDataTri3::_faultId = 100;
+
+const int pylith::bc::BoundaryMeshDataTri3::_numCorners = 2;
+const int pylith::bc::BoundaryMeshDataTri3::_numCells = 1;
+
+const int pylith::bc::BoundaryMeshDataTri3::_numVerticesNoFault = 2;
+const int pylith::bc::BoundaryMeshDataTri3::_verticesNoFault[] = {
+ 3, 5
+};
+const int pylith::bc::BoundaryMeshDataTri3::_cellsNoFault[] = {
+ 3, 5
+};
+
+const int pylith::bc::BoundaryMeshDataTri3::_numVerticesFault = 3;
+const int pylith::bc::BoundaryMeshDataTri3::_verticesFault[] = {
+ 3, 5, 6
+};
+const int pylith::bc::BoundaryMeshDataTri3::_cellsFault[] = {
+ 3, 5
+};
+
+pylith::bc::BoundaryMeshDataTri3::BoundaryMeshDataTri3(void)
+{ // constructor
+ filename = const_cast<char*>(_filename);
+
+ bcLabel = const_cast<char*>(_bcLabel);
+
+ faultLabel = const_cast<char*>(_faultLabel);
+ faultId = _faultId;
+
+ numCorners = _numCorners;
+ numCells = _numCells;
+
+ numVerticesNoFault = _numVerticesNoFault;
+ verticesNoFault = const_cast<int*>(_verticesNoFault);
+ cellsNoFault = const_cast<int*>(_cellsNoFault);
+
+ numVerticesFault = _numVerticesFault;
+ verticesFault = const_cast<int*>(_verticesFault);
+ cellsFault = const_cast<int*>(_cellsFault);
+} // constructor
+
+pylith::bc::BoundaryMeshDataTri3::~BoundaryMeshDataTri3(void)
+{}
+
+
+// End of file
Added: short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshDataTri3.hh
===================================================================
--- short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshDataTri3.hh (rev 0)
+++ short/3D/PyLith/trunk/unittests/libtests/bc/data/BoundaryMeshDataTri3.hh 2008-03-02 05:25:22 UTC (rev 11300)
@@ -0,0 +1,59 @@
+// -*- C++ -*-
+//
+// ======================================================================
+//
+// Brad T. Aagaard
+// U.S. Geological Survey
+//
+// {LicenseText}
+//
+// ======================================================================
+//
+
+#if !defined(pylith_bc_boundarymeshdatatri3_hh)
+#define pylith_bc_boundarymeshdatatri3_hh
+
+#include "BoundaryMeshData.hh"
+
+namespace pylith {
+ namespace bc {
+ class BoundaryMeshDataTri3;
+ } // pylith
+} // bc
+
+class pylith::bc::BoundaryMeshDataTri3 : public BoundaryMeshData
+{
+
+public:
+
+ /// Constructor
+ BoundaryMeshDataTri3(void);
+
+ /// Destructor
+ ~BoundaryMeshDataTri3(void);
+
+private:
+
+ static const char* _filename;
+
+ static const char* _bcLabel;
+
+ static const char* _faultLabel;
+ static const int _faultId;
+
+ static const int _numCorners;
+ static const int _numCells;
+
+ static const int _numVerticesNoFault;
+ static const int _verticesNoFault[];
+ static const int _cellsNoFault[];
+
+ static const int _numVerticesFault;
+ static const int _verticesFault[];
+ static const int _cellsFault[];
+
+};
+
+#endif // pylith_bc_boundarymeshdatatri3_hh
+
+// End of file
Modified: short/3D/PyLith/trunk/unittests/libtests/bc/data/tri3.mesh
===================================================================
--- short/3D/PyLith/trunk/unittests/libtests/bc/data/tri3.mesh 2008-03-02 05:24:22 UTC (rev 11299)
+++ short/3D/PyLith/trunk/unittests/libtests/bc/data/tri3.mesh 2008-03-02 05:25:22 UTC (rev 11300)
@@ -42,6 +42,14 @@
}
}
group = {
+ name = fault
+ type = vertices
+ count = 2
+ indices = {
+ 1 2
+ }
+ }
+ group = {
name = bc
type = vertices
count = 2
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