[cig-commits] r15553 - short/3D/PyLith/trunk/doc/install
brad at geodynamics.org
brad at geodynamics.org
Mon Aug 17 20:50:47 PDT 2009
Author: brad
Date: 2009-08-17 20:50:47 -0700 (Mon, 17 Aug 2009)
New Revision: 15553
Added:
short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_Fink.txt
short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_Fink_bash.sh
short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_MacPorts.txt
short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_MacPorts_bash.sh
Removed:
short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard.txt
short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_bash.sh
Log:
Added instruction for MacPorts.
Deleted: short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard.txt
===================================================================
--- short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard.txt 2009-08-17 20:06:42 UTC (rev 15552)
+++ short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard.txt 2009-08-18 03:50:47 UTC (rev 15553)
@@ -1,317 +0,0 @@
-======================================================================
-INSTRUCTIONS FOR INSTALLING PYLITH ON AN INTEL MAC RUNNING OSX 10.4
-======================================================================
-
-NOTE: These installation instructions use the Fink package manager to
-install some commonly used packages. MacPorts appears to be a better
-alternative because packages are updated more frequently and there is
-better coherence among packages. However, MacPorts builds all packages
-from source so installing packages can take a long time.
-
-I place applications that are rarely updated in /sw/tools (with Fink
-stuff in /sw). For CIG source code, I separate the source code, build
-directories, and installed code. The source code sits in
-$HOME/src/cig, I build the packages under $HOME/scratch/build/cig, and
-install the packages to $HOME/tools/cig.
-
-I use the bash shell and place all software package environment
-variables in a .bash.tools file that is read by the .bashrc file.
-
-To make things easier, I create environment variables TOOLS_DIR,
-CIG_DIR, TOOLS_FORMAT, and PYTHON_VERSION. The TOOLS_FORMAT variable
-makes it easier to maintain multiple copies of packages built with
-different options (e.g., different compilers and different levels of
-optimization). Note that the python version should match the version
-of Python you will be using. If you don't know the version of python,
-run "python --version".
-
- export TOOLS_DIR=/sw/tools
- export TOOLS_FORMAT=gcc-4.0
- export PYTHON_VERSION=2.5
-
- export CIG_DIR=$HOME/tools/cig/${TOOLS_FORMAT}
- export CIG_INCDIR=${CIG_DIR}/include
- export CIG_LIBDIR=${CIG_DIR}/lib
- PATH=$PATH:${CIG_DIR}/bin
- export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${CIG_LIBDIR}
- export PYTHONPATH=${PYTHONPATH}:${CIG_LIBDIR}/python${PYTHON_VERSION}/site-packages
-
-1. X and Xcode
-
- X and Xcode are on the Apple OSX install disc 1. X is under
- "additional options."
-
-2. Install Fink (http://www.finkproject.org/)
-
-3. Install Fink Commander
- (http://sourceforge.net/project/showfiles.php?group_id=48896&package_id=42095)
-
-4. Install Fink packages
-
- Install the following Fink binary packages:
-
- svn-client
- autoconf2.5
- automake1.9
- libtool4
- netcdf
-
-5. Install python 2.5.1 (http://www.python.org).
-
- a. Download the universal installer.
- b. Install the package by double clicking on MacPython.mpkg.
- c. Update environment variables.
-
- PATH=/Library/Frameworks/Python.framework/Versions/Current/bin:${PATH}
-
-6. Install the Scipy superpack (http://trichech.us/?page_id=5).
-
- This includes numpy, scipy, and matplotlib.
-
- a. Download the installer and install the package by double clicking
- on the .mpkg file.
-
-7. Install mercurial (http://www.selenic.com/mercurial/wiki/)
-
- a. Download the package to $TOOLS_DIR/mercurial-0.9.4.
- b. Install package.
-
- python setup.py install --prefix=$TOOLS_DIR/mercurial-0.9.4/${TOOLS_FORMAT}
-
- c. Set environment variables.
-
- MERCURIAL_DIR=${TOOLS_DIR}/mercurial-0.9.4/${TOOLS_FORMAT}
- export PATH=${PATH}:${MERCURIAL_DIR}/bin
- export PYTHONPATH=${PYTHONPATH}:${MERCURIAL_DIR}/lib/python${PYTHON_VERSION}/site-packages
-
-8. Install MPICH2 (http://www.mcs.anl.gov/research/projects/mpich2/)
-
- a. Untar the source and then run configure, build, and install.
-
- ./configure --with-arch=Darwin --disable-f90 --enable-css --prefix=${TOOLS_DIR}/mpich2-1.0.5/${TOOLS_FORMAT} --enable-g=none --enable-fast --disable-weak-symbols --enable-shared-libx=osx-gcc
- make
- make install
-
- b. Verify the shared libraries (lib*.dyllib) are created.
-
- c. If any of the dylib files are missing, create them by hand from the
- static libraries.
-
- Note: It is important to specify the full path for the .dylib files.
-
- To create libmpich.dylib:
-
- cd ${TOOLS_DIR}/mpich2-1.0.5/${TOOLS_FORMAT}/lib
- mkdir tmp
- cd tmp
- ar -x ../libmpich.a
- gcc -dynamiclib -single_module -undefined dynamic_lookup -o ${TOOLS_DIR}/mpich2-1.0.5/${TOOLS_FORMAT}/lib/libmpich.dylib *.o
- rm *.o
- cd ..
- rmdir tmp
-
- d. Set environment variables.
-
- export MPI_DIR=$TOOLS_DIR/mpich2-1.0.5/${TOOLS_FORMAT}
- PATH=$PATH:$MPI_DIR/bin
- export MANPATH=$MPI_DIR/man:$MANPATH
- export MPI_INCDIR=$MPI_DIR/include
- export MPI_LIBDIR=$MPI_DIR/lib
- export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MPI_LIBDIR}
-
-9. Install ParMetis (http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview)
-
- a. Untar the source and edit the Makefile.
- b. Set the CC, COPTIONS, INCDIR, LD, and LIBDIR variables.
-
- CC = gcc
- COPTIONS = -fPIC
- INCDIR = -I${MPI_INCDIR}
- LD = gcc
- LIBDIR = -L${MPI_LIBDIR} -lmpich -lpmpich
-
- c. Create shared libraries by hand.
-
- Note: It is important to specify the full path for the .dylib files.
-
- cd ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/lib
- mkdir tmp
- cd tmp
- ar -x ../libmetis.a
- gcc -o ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/lib/libmetis.dylib -dynamiclib -single_module -undefined dynamic_lookup *.o
- rm *.o
- ar -x ../libparmetis.a
- gcc -o ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/lib/libparmetis.dylib -dynamiclib -single_module -undefined dynamic_lookup *.o
- rm *.o
- cd ..
- rmdir tmp
-
- d. Copy parmetis.h to the install location.
-
- cp parmetis.h ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/include/
-
- e. Set environment variables.
-
- PARMETIS_DIR=$TOOLS_DIR/parmetis-3.1/${TOOLS_FORMAT}
- export PARMETIS_INCDIR=$PARMETIS_DIR/include
- export PARMETIS_LIBDIR=$PARMETIS_DIR/lib
- export PARMETIS_LIBS="-lparmetis -lmetis"
- export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${PARMETIS_LIBDIR}
-
-10. Install cppunit (http://cppunit.sourceforge.net/cppunit-wiki)
-
- a. Untar the source and run configure, build, and install.
-
- ./configure --prefix=${TOOLS_DIR}/cppunit-1.12.0/${TOOLS_FORMAT}
- make
- make install
-
- b. Set environment variables.
-
- CPPUNIT_DIR=${TOOLS_DIR}/cppunit-1.12.0/${TOOLS_FORMAT}
- PATH=${PATH}:${CPPUNIT_DIR}/bin
- export CPPUNIT_LIBDIR=${CPPUNIT_DIR}/lib
- export CPPUNIT_INCDIR=${CPPUNIT_DIR}/include
- export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${CPPUNIT_LIBDIR}
-
-11. Install FIAT (http://www.fenics.org/wiki/FIAT)
-
- a. Install FIAT.
-
- python setup.py install --prefix=$TOOLS_DIR/fiat-0.3.1/${TOOLS_FORMAT}
-
- b. Set environment variables.
-
- FIAT_DIR=${TOOLS_DIR}/fiat-0.3.1/${TOOLS_FORMAT}
- export PYTHONPATH=${PYTHONPATH}:${FIAT_DIR}/lib/python${PYTHON_VERSION}/site-packages
-
-12. Install the development version of PETSc
- (http://www-unix.mcs.anl.gov/petsc/petsc-as/)
-
- a. Clone the source repository.
-
- hg clone http://petsc.cs.iit.edu/petsc/petsc-dev
- cd petsc-dev/config
- hg clone http://petsc.cs.iit.edu/petsc/BuildSystem BuildSystem
-
-
- b. Set PETSC_ARCH and PETSC_DIR environment variables.
-
- export PETSC_DIR=${TOOLS_DIR}/petsc-dev
- export PETSC_ARCH=osx_${TOOLS_FORMAT}_debug
-
- c. Configure PETSc, build, and test.
-
- ARCH_FLAGS="--PETSC_ARCH=osx_${TOOLS_FORMAT}_debug --with-debugging=1"
- LANG_FLAGS="--with-clanguage=c++"
- BUILD_FLAGS="--with-mpi-compilers=0 --with-gnu-compilers=1 --with-shared=1 --with-dynamic=1 --with-64-bit-points=1 --with-large-file-io=1 --CC=gcc --CXX=g++"
- MPI_FLAGS="--with-mpi-dir=/sw/tools/mpich2-1.0.5/gcc-4.0 --with-mpi-shared=0"
- OPTIONS="--with-lgrind=0 --download-tetgen"
- PART_FLAGS="--with-chaco=1 --download-chaco=1 --with-parmetis=1 --with-parmetis-dir=/sw/tools/parmetis-3.1/gcc-4.0"
- SIEVE_FLAGS="--with-sieve=1 --with-boost=1 --download-boost=1"
- config/configure.py ${ARCH_FLAGS} ${LANG_FLAGS} ${BUILD_FLAGS} ${MPI_FLAGS} ${OPTIONS} ${PART_FLAGS} ${SIEVE_FLAGS} ${EXTRA_FLAGS}
- make
- make test
-
-13. Install SWIG (http://www.swig.org/)
-
- a. Untar and install.
-
- tar -zxvf swig.1.3.39.tgz
- configure --prefix=${TOOLS_DIR}/swig-1.3.39/${TOOLS_FORMAT}
- make
- make install
-
- b. Update environment variables.
-
- SWIG_DIR=${TOOLS_DIR}/swig-1.3.39/${TOOLS_FORMAT}
- PATH=${PATH}:${SWIG_DIR}/bin
-
-14. Install pythia.
-
- a. Download the source code from the SVN repository.
-
- svn co http://geodynamics.org/svn/cig/cs/pythia/trunk pythia
-
- b. Install the software.
-
- python setup.py install --prefix=${CIG_DIR}
-
- c. Set environment variables.
-
- export PYTHIA_INCDIR=${CIG_INCDIR}/pythia-0.8
-
-15. Install nemesis.
-
- a. Download the source code from the SVN repository.
-
- svn co http://geodynamics.org/svn/cig/cs/nemesis/trunk nemesis
-
- b. Create the configure script.
-
- autoreconf -if
-
- c. Run configure, build, and install.
-
- ./configure --prefix=${CIG_DIR} CPPFLAGS="-I${CIG_INCDIR} -I${MPI_INCDIR}" LDFLAGS="-L${CIG_LIBDIR} -L${MPI_LIBDIR}" LIBS="-lpmpich -lmpich" CC=gcc CXX=g++
- make
- make install
-
- If you get an error about the architecture, edit libtool and
- delete "-arch ppc" or "-arch intel", which ever one is not for
- your machine.
-
-16. Install PROJ.4 (http://trac.osgeo.org/proj/)
-
- a. Download the source code AND the datum shifts (proj-datumgrid-1.4.zip).
-
- b. Untar the source code and unzip the datum shifts in the nad directory.
-
- c. Run configure and build.
-
- ./configure --prefix=${TOOLS_DIR}/proj-4.5.0/${TOOLS_FORMAT}
- make
- make install
-
- d. Set environment variables.
-
- PROJ4_DIR=${TOOLS_DIR}/proj-4.5.0/${TOOLS_FORMAT}
- export PROJ4_LIBDIR=${PROJ4_DIR}/lib
- export PROJ4_INCDIR=${PROJ4_DIR}/include
- PATH=${PATH}:${PROJ4_DIR}/bin
- export MANPATH=${MANPATH}:${PROJ4_DIR}/man
-
-17. Install spatialdata.
-
- a. Download the source code from the SVN repository.
-
- svn co http://geodynamics.org/svn/cig/cs/spatialdata-0.1/trunk spatialdata
-
- b. Create the configure script.
-
- autoreconf -if
-
- c. Run configure, build, install, and the unit tests.
-
- ./configure --enable-testing --enable-pythia --prefix=${CIG_DIR} CPPFLAGS="-I${PROJ4_INCDIR} -I${CPPUNIT_INCDIR} -I${CIG_INCDIR}" LDFLAGS="-L${PROJ4_LIBDIR} -L${CPPUNIT_LIBDIR} -L${CIG_LIBDIR} " LIBS="" CC=gcc CXX=g++
- make
- make install
- make check
-
-18. Install PyLith.
-
- a. Download the source code from the SVN repository.
-
- svn co http://geodynamics.org/svn/cig/short/3D/PyLith/trunk pylith
-
- b. Create the configure script.
-
- autoreconf -if
-
- c. Run configure, build, install, and the unit tests.
-
- ./configure --enable-testing --enable-tetgen --enable-cubit --prefix=${CIG_DIR} CPPFLAGS="-I${PROJ4_INCDIR} -I${CPPUNIT_INCDIR} -I${CIG_INCDIR} -I/sw/include" LDFLAGS="-L${PROJ4_LIBDIR} -L${CPPUNIT_LIBDIR} -L${CIG_LIBDIR} -L/sw/lib" LIBS="" CC=gcc CXX=g++ CFLAGS="-g -O" CXXFLAGS="-g -O"
- make
- make install
- make check
-
Copied: short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_Fink.txt (from rev 15545, short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard.txt)
===================================================================
--- short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_Fink.txt (rev 0)
+++ short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_Fink.txt 2009-08-18 03:50:47 UTC (rev 15553)
@@ -0,0 +1,318 @@
+======================================================================
+INSTRUCTIONS FOR INSTALLING PYLITH ON AN INTEL MAC RUNNING OSX 10.4
+======================================================================
+
+NOTE: This file is not kept up-to-date. We strongly recommend using
+MacPorts instead of Fink (see the MacBookPro_Aagaard_MacPorts.txt
+file).
+
+These installation instructions use the Fink package manager to
+install some commonly used packages.
+
+I place applications that are rarely updated in /sw/tools (with Fink
+stuff in /sw). For CIG source code, I separate the source code, build
+directories, and installed code. The source code sits in
+$HOME/src/cig, I build the packages under $HOME/scratch/build/cig, and
+install the packages to $HOME/tools/cig.
+
+I use the bash shell and place all software package environment
+variables in a .bash.tools file that is read by the .bashrc file.
+
+To make things easier, I create environment variables TOOLS_DIR,
+CIG_DIR, TOOLS_FORMAT, and PYTHON_VERSION. The TOOLS_FORMAT variable
+makes it easier to maintain multiple copies of packages built with
+different options (e.g., different compilers and different levels of
+optimization). Note that the python version should match the version
+of Python you will be using. If you don't know the version of python,
+run "python --version".
+
+ export TOOLS_DIR=/sw/tools
+ export TOOLS_FORMAT=gcc-4.0
+ export PYTHON_VERSION=2.5
+
+ export CIG_DIR=$HOME/tools/cig/${TOOLS_FORMAT}
+ export CIG_INCDIR=${CIG_DIR}/include
+ export CIG_LIBDIR=${CIG_DIR}/lib
+ PATH=$PATH:${CIG_DIR}/bin
+ export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${CIG_LIBDIR}
+ export PYTHONPATH=${PYTHONPATH}:${CIG_LIBDIR}/python${PYTHON_VERSION}/site-packages
+
+1. X and Xcode
+
+ X and Xcode are on the Apple OSX install disc 1. X is under
+ "additional options."
+
+2. Install Fink (http://www.finkproject.org/)
+
+3. Install Fink Commander
+ (http://sourceforge.net/project/showfiles.php?group_id=48896&package_id=42095)
+
+4. Install Fink packages
+
+ Install the following Fink binary packages:
+
+ svn-client
+ autoconf2.5
+ automake1.9
+ libtool4
+ netcdf
+
+5. Install python 2.5.1 (http://www.python.org).
+
+ a. Download the universal installer.
+ b. Install the package by double clicking on MacPython.mpkg.
+ c. Update environment variables.
+
+ PATH=/Library/Frameworks/Python.framework/Versions/Current/bin:${PATH}
+
+6. Install the Scipy superpack (http://trichech.us/?page_id=5).
+
+ This includes numpy, scipy, and matplotlib.
+
+ a. Download the installer and install the package by double clicking
+ on the .mpkg file.
+
+7. Install mercurial (http://www.selenic.com/mercurial/wiki/)
+
+ a. Download the package to $TOOLS_DIR/mercurial-0.9.4.
+ b. Install package.
+
+ python setup.py install --prefix=$TOOLS_DIR/mercurial-0.9.4/${TOOLS_FORMAT}
+
+ c. Set environment variables.
+
+ MERCURIAL_DIR=${TOOLS_DIR}/mercurial-0.9.4/${TOOLS_FORMAT}
+ export PATH=${PATH}:${MERCURIAL_DIR}/bin
+ export PYTHONPATH=${PYTHONPATH}:${MERCURIAL_DIR}/lib/python${PYTHON_VERSION}/site-packages
+
+8. Install MPICH2 (http://www.mcs.anl.gov/research/projects/mpich2/)
+
+ a. Untar the source and then run configure, build, and install.
+
+ ./configure --with-arch=Darwin --disable-f90 --enable-css --prefix=${TOOLS_DIR}/mpich2-1.0.5/${TOOLS_FORMAT} --enable-g=none --enable-fast --disable-weak-symbols --enable-shared-libx=osx-gcc
+ make
+ make install
+
+ b. Verify the shared libraries (lib*.dyllib) are created.
+
+ c. If any of the dylib files are missing, create them by hand from the
+ static libraries.
+
+ Note: It is important to specify the full path for the .dylib files.
+
+ To create libmpich.dylib:
+
+ cd ${TOOLS_DIR}/mpich2-1.0.5/${TOOLS_FORMAT}/lib
+ mkdir tmp
+ cd tmp
+ ar -x ../libmpich.a
+ gcc -dynamiclib -single_module -undefined dynamic_lookup -o ${TOOLS_DIR}/mpich2-1.0.5/${TOOLS_FORMAT}/lib/libmpich.dylib *.o
+ rm *.o
+ cd ..
+ rmdir tmp
+
+ d. Set environment variables.
+
+ export MPI_DIR=$TOOLS_DIR/mpich2-1.0.5/${TOOLS_FORMAT}
+ PATH=$PATH:$MPI_DIR/bin
+ export MANPATH=$MPI_DIR/man:$MANPATH
+ export MPI_INCDIR=$MPI_DIR/include
+ export MPI_LIBDIR=$MPI_DIR/lib
+ export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MPI_LIBDIR}
+
+9. Install ParMetis (http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview)
+
+ a. Untar the source and edit the Makefile.
+ b. Set the CC, COPTIONS, INCDIR, LD, and LIBDIR variables.
+
+ CC = gcc
+ COPTIONS = -fPIC
+ INCDIR = -I${MPI_INCDIR}
+ LD = gcc
+ LIBDIR = -L${MPI_LIBDIR} -lmpich -lpmpich
+
+ c. Create shared libraries by hand.
+
+ Note: It is important to specify the full path for the .dylib files.
+
+ cd ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/lib
+ mkdir tmp
+ cd tmp
+ ar -x ../libmetis.a
+ gcc -o ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/lib/libmetis.dylib -dynamiclib -single_module -undefined dynamic_lookup *.o
+ rm *.o
+ ar -x ../libparmetis.a
+ gcc -o ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/lib/libparmetis.dylib -dynamiclib -single_module -undefined dynamic_lookup *.o
+ rm *.o
+ cd ..
+ rmdir tmp
+
+ d. Copy parmetis.h to the install location.
+
+ cp parmetis.h ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/include/
+
+ e. Set environment variables.
+
+ PARMETIS_DIR=$TOOLS_DIR/parmetis-3.1/${TOOLS_FORMAT}
+ export PARMETIS_INCDIR=$PARMETIS_DIR/include
+ export PARMETIS_LIBDIR=$PARMETIS_DIR/lib
+ export PARMETIS_LIBS="-lparmetis -lmetis"
+ export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${PARMETIS_LIBDIR}
+
+10. Install cppunit (http://cppunit.sourceforge.net/cppunit-wiki)
+
+ a. Untar the source and run configure, build, and install.
+
+ ./configure --prefix=${TOOLS_DIR}/cppunit-1.12.0/${TOOLS_FORMAT}
+ make
+ make install
+
+ b. Set environment variables.
+
+ CPPUNIT_DIR=${TOOLS_DIR}/cppunit-1.12.0/${TOOLS_FORMAT}
+ PATH=${PATH}:${CPPUNIT_DIR}/bin
+ export CPPUNIT_LIBDIR=${CPPUNIT_DIR}/lib
+ export CPPUNIT_INCDIR=${CPPUNIT_DIR}/include
+ export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${CPPUNIT_LIBDIR}
+
+11. Install FIAT (http://www.fenics.org/wiki/FIAT)
+
+ a. Install FIAT.
+
+ python setup.py install --prefix=$TOOLS_DIR/fiat-0.3.1/${TOOLS_FORMAT}
+
+ b. Set environment variables.
+
+ FIAT_DIR=${TOOLS_DIR}/fiat-0.3.1/${TOOLS_FORMAT}
+ export PYTHONPATH=${PYTHONPATH}:${FIAT_DIR}/lib/python${PYTHON_VERSION}/site-packages
+
+12. Install the development version of PETSc
+ (http://www-unix.mcs.anl.gov/petsc/petsc-as/)
+
+ a. Clone the source repository.
+
+ hg clone http://petsc.cs.iit.edu/petsc/petsc-dev
+ cd petsc-dev/config
+ hg clone http://petsc.cs.iit.edu/petsc/BuildSystem BuildSystem
+
+
+ b. Set PETSC_ARCH and PETSC_DIR environment variables.
+
+ export PETSC_DIR=${TOOLS_DIR}/petsc-dev
+ export PETSC_ARCH=osx_${TOOLS_FORMAT}_debug
+
+ c. Configure PETSc, build, and test.
+
+ ARCH_FLAGS="--PETSC_ARCH=osx_${TOOLS_FORMAT}_debug --with-debugging=1"
+ LANG_FLAGS="--with-clanguage=c++"
+ BUILD_FLAGS="--with-mpi-compilers=0 --with-gnu-compilers=1 --with-shared=1 --with-dynamic=1 --with-64-bit-points=1 --with-large-file-io=1 --CC=gcc --CXX=g++"
+ MPI_FLAGS="--with-mpi-dir=/sw/tools/mpich2-1.0.5/gcc-4.0 --with-mpi-shared=0"
+ OPTIONS="--with-lgrind=0 --download-tetgen"
+ PART_FLAGS="--with-chaco=1 --download-chaco=1 --with-parmetis=1 --with-parmetis-dir=/sw/tools/parmetis-3.1/gcc-4.0"
+ SIEVE_FLAGS="--with-sieve=1 --with-boost=1 --download-boost=1"
+ config/configure.py ${ARCH_FLAGS} ${LANG_FLAGS} ${BUILD_FLAGS} ${MPI_FLAGS} ${OPTIONS} ${PART_FLAGS} ${SIEVE_FLAGS} ${EXTRA_FLAGS}
+ make
+ make test
+
+13. Install SWIG (http://www.swig.org/)
+
+ a. Untar and install.
+
+ tar -zxvf swig.1.3.39.tgz
+ configure --prefix=${TOOLS_DIR}/swig-1.3.39/${TOOLS_FORMAT}
+ make
+ make install
+
+ b. Update environment variables.
+
+ SWIG_DIR=${TOOLS_DIR}/swig-1.3.39/${TOOLS_FORMAT}
+ PATH=${PATH}:${SWIG_DIR}/bin
+
+14. Install pythia.
+
+ a. Download the source code from the SVN repository.
+
+ svn co http://geodynamics.org/svn/cig/cs/pythia/trunk pythia
+
+ b. Install the software.
+
+ python setup.py install --prefix=${CIG_DIR}
+
+ c. Set environment variables.
+
+ export PYTHIA_INCDIR=${CIG_INCDIR}/pythia-0.8
+
+15. Install nemesis.
+
+ a. Download the source code from the SVN repository.
+
+ svn co http://geodynamics.org/svn/cig/cs/nemesis/trunk nemesis
+
+ b. Create the configure script.
+
+ autoreconf -if
+
+ c. Run configure, build, and install.
+
+ ./configure --prefix=${CIG_DIR} CPPFLAGS="-I${CIG_INCDIR} -I${MPI_INCDIR}" LDFLAGS="-L${CIG_LIBDIR} -L${MPI_LIBDIR}" LIBS="-lpmpich -lmpich" CC=gcc CXX=g++
+ make
+ make install
+
+ If you get an error about the architecture, edit libtool and
+ delete "-arch ppc" or "-arch intel", which ever one is not for
+ your machine.
+
+16. Install PROJ.4 (http://trac.osgeo.org/proj/)
+
+ a. Download the source code AND the datum shifts (proj-datumgrid-1.4.zip).
+
+ b. Untar the source code and unzip the datum shifts in the nad directory.
+
+ c. Run configure and build.
+
+ ./configure --prefix=${TOOLS_DIR}/proj-4.5.0/${TOOLS_FORMAT}
+ make
+ make install
+
+ d. Set environment variables.
+
+ PROJ4_DIR=${TOOLS_DIR}/proj-4.5.0/${TOOLS_FORMAT}
+ export PROJ4_LIBDIR=${PROJ4_DIR}/lib
+ export PROJ4_INCDIR=${PROJ4_DIR}/include
+ PATH=${PATH}:${PROJ4_DIR}/bin
+ export MANPATH=${MANPATH}:${PROJ4_DIR}/man
+
+17. Install spatialdata.
+
+ a. Download the source code from the SVN repository.
+
+ svn co http://geodynamics.org/svn/cig/cs/spatialdata-0.1/trunk spatialdata
+
+ b. Create the configure script.
+
+ autoreconf -if
+
+ c. Run configure, build, install, and the unit tests.
+
+ ./configure --enable-testing --enable-pythia --prefix=${CIG_DIR} CPPFLAGS="-I${PROJ4_INCDIR} -I${CPPUNIT_INCDIR} -I${CIG_INCDIR}" LDFLAGS="-L${PROJ4_LIBDIR} -L${CPPUNIT_LIBDIR} -L${CIG_LIBDIR} " LIBS="" CC=gcc CXX=g++
+ make
+ make install
+ make check
+
+18. Install PyLith.
+
+ a. Download the source code from the SVN repository.
+
+ svn co http://geodynamics.org/svn/cig/short/3D/PyLith/trunk pylith
+
+ b. Create the configure script.
+
+ autoreconf -if
+
+ c. Run configure, build, install, and the unit tests.
+
+ ./configure --enable-testing --enable-tetgen --enable-cubit --prefix=${CIG_DIR} CPPFLAGS="-I${PROJ4_INCDIR} -I${CPPUNIT_INCDIR} -I${CIG_INCDIR} -I/sw/include" LDFLAGS="-L${PROJ4_LIBDIR} -L${CPPUNIT_LIBDIR} -L${CIG_LIBDIR} -L/sw/lib" LIBS="" CC=gcc CXX=g++ CFLAGS="-g -O" CXXFLAGS="-g -O"
+ make
+ make install
+ make check
+
Copied: short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_Fink_bash.sh (from rev 15545, short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_bash.sh)
===================================================================
--- short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_Fink_bash.sh (rev 0)
+++ short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_Fink_bash.sh 2009-08-18 03:50:47 UTC (rev 15553)
@@ -0,0 +1,67 @@
+# Environment variables for Bash Shells associated with Brad Aagaard's
+# install of PyLith on a MacBookPro running OS X 10.4
+
+# General
+export TOOLS_DIR=/sw/tools
+export TOOLS_FORMAT=gcc-4.0
+export PYTHON_VERSION=2.5
+
+# Location for installation of CIG software
+export CIG_DIR=$HOME/tools/cig/${TOOLS_FORMAT}
+export CIG_INCDIR=${CIG_DIR}/include
+export CIG_LIBDIR=${CIG_DIR}/lib
+PATH=$PATH:${CIG_DIR}/bin
+export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${CIG_LIBDIR}
+export PYTHONPATH=${PYTHONPATH}:${CIG_LIBDIR}/python${PYTHON_VERSION}/site-packages
+
+# Python 2.5.1
+PATH=/Library/Frameworks/Python.framework/Versions/Current/bin:${PATH}
+
+# Mecurial
+MERCURIAL_DIR=${TOOLS_DIR}/mercurial-0.9.4/${TOOLS_FORMAT}
+export PATH=${PATH}:${MERCURIAL_DIR}/bin
+export PYTHONPATH=${PYTHONPATH}:${MERCURIAL_DIR}/lib/python${PYTHON_VERSION}/site-packages
+
+# MPICH2
+export MPI_DIR=$TOOLS_DIR/mpich2-1.0.5/${TOOLS_FORMAT}
+PATH=$PATH:$MPI_DIR/bin
+export MANPATH=$MPI_DIR/man:$MANPATH
+export MPI_INCDIR=$MPI_DIR/include
+export MPI_LIBDIR=$MPI_DIR/lib
+export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MPI_LIBDIR}
+
+# ParMetis
+PARMETIS_DIR=$TOOLS_DIR/parmetis-3.1/${TOOLS_FORMAT}
+export PARMETIS_INCDIR=$PARMETIS_DIR/include
+export PARMETIS_LIBDIR=$PARMETIS_DIR/lib
+export PARMETIS_LIBS="-lparmetis -lmetis"
+export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${PARMETIS_LIBDIR}
+
+# Cppunit
+CPPUNIT_DIR=${TOOLS_DIR}/cppunit-1.12.0/${TOOLS_FORMAT}
+PATH=${PATH}:${CPPUNIT_DIR}/bin
+export CPPUNIT_LIBDIR=${CPPUNIT_DIR}/lib
+export CPPUNIT_INCDIR=${CPPUNIT_DIR}/include
+export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${CPPUNIT_LIBDIR}
+
+# FIAT
+FIAT_DIR=${TOOLS_DIR}/fiat-0.3.1/${TOOLS_FORMAT}
+export PYTHONPATH=${PYTHONPATH}:${FIAT_DIR}/lib/python${PYTHON_VERSION}/site-packages
+
+# PETSc
+export PETSC_DIR=${TOOLS_DIR}/petsc-dev
+export PETSC_ARCH=osx_${TOOLS_FORMAT}_debug
+
+# SWIG
+SWIG_DIR=${TOOLS_DIR}/swig-1.3.39/${TOOLS_FORMAT}
+PATH=${PATH}:${SWIG_DIR}/bin
+
+# Pythia
+export PYTHIA_INCDIR=${CIG_INCDIR}/pythia-0.8
+
+# Proj.4
+PROJ4_DIR=${TOOLS_DIR}/proj-4.5.0/${TOOLS_FORMAT}
+export PROJ4_LIBDIR=${PROJ4_DIR}/lib
+export PROJ4_INCDIR=${PROJ4_DIR}/include
+PATH=${PATH}:${PROJ4_DIR}/bin
+export MANPATH=${MANPATH}:${PROJ4_DIR}/man
Added: short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_MacPorts.txt
===================================================================
--- short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_MacPorts.txt (rev 0)
+++ short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_MacPorts.txt 2009-08-18 03:50:47 UTC (rev 15553)
@@ -0,0 +1,271 @@
+======================================================================
+INSTRUCTIONS FOR INSTALLING PYLITH ON AN INTEL MAC RUNNING OSX 10.5
+======================================================================
+
+NOTE: These installation instructions use the MacPorts package manager
+to install some commonly used packages. MacPorts appears to be a
+better alternative to Fink because packages are updated more
+frequently and there is better coherence among packages. However,
+MacPorts builds all packages from source so installing packages can
+take a long time.
+
+MacPorts places everything in /opt/local. For CIG source code, I
+separate the source code, build directories, and installed code. The
+source code sits in $HOME/src/cig, I build the packages under
+$HOME/scratch/build/cig, and install the packages to $HOME/tools/cig.
+
+I use the bash shell and place all software package environment
+variables in a .bash.tools file that is read by the .bashrc file.
+
+To make things easier, I create environment variables TOOLS_DIR,
+CIG_DIR, TOOLS_FORMAT, and PYTHON_VERSION. The TOOLS_FORMAT variable
+makes it easier to maintain multiple copies of packages built with
+different options (e.g., different compilers and different levels of
+optimization). Note that the python version should match the version
+of Python you will be using. If you don't know the version of python,
+run "python --version".
+
+ export TOOLS_DIR=/tools
+ export TOOLS_FORMAT=gcc-4.0
+ export PYTHON_VERSION=2.5
+
+ export CIG_DIR=$HOME/tools/cig/${TOOLS_FORMAT}
+ export CIG_INCDIR=${CIG_DIR}/include
+ export CIG_LIBDIR=${CIG_DIR}/lib
+ PATH=$PATH:${CIG_DIR}/bin
+ export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${CIG_LIBDIR}
+ export PYTHONPATH=${PYTHONPATH}:${CIG_LIBDIR}/python${PYTHON_VERSION}/site-packages
+
+1. X and Xcode
+
+ X and Xcode are on the Apple OSX install disc 1. X is under
+ "additional options."
+
+2. Install MacPorts (http://www.macports.org/)
+
+3. Install Porticus (GUI interface to MacPorts)
+ (http://porticus.alittledrop.com)
+
+4. Install MacPorts packages
+
+ Install the following using Porticus:
+
+ autoconf
+ automake
+ libtool
+ subversion
+ mercurial
+ cppunit
+ python25
+ py25-numpy
+ swig
+
+ Install netcdf via the command line so that you can change the default variants:
+
+ /opt/local/bin/port install netcdf -dap -netcdf4
+
+5. Install MPICH2 (http://www.mcs.anl.gov/research/projects/mpich2/)
+
+ a. Untar the source and then run configure, build, and install.
+
+ ./configure --with-arch=Darwin --disable-f90 --enable-css --prefix=${TOOLS_DIR}/mpich2-1.1.1/${TOOLS_FORMAT} --enable-g=none --enable-fast --disable-weak-symbols --enable-shared-libx=osx-gcc
+ make
+ make install
+
+ b. Verify the shared libraries (lib*.dyllib) are created.
+
+ c. If any of the dylib files are missing, create them by hand from the
+ static libraries.
+
+ Note: It is important to specify the full path for the .dylib files.
+
+ To create libmpich.dylib:
+
+ cd ${TOOLS_DIR}/mpich2-1.1.1/${TOOLS_FORMAT}/lib
+ mkdir tmp
+ cd tmp
+ ar -x ../libmpich.a
+ gcc -dynamiclib -single_module -undefined dynamic_lookup -o ${TOOLS_DIR}/mpich2-1.1.1/${TOOLS_FORMAT}/lib/libmpich.dylib *.o
+ rm *.o
+ cd ..
+ rmdir tmp
+
+ d. Set environment variables.
+
+ export MPI_DIR=$TOOLS_DIR/mpich2-1.1.1/${TOOLS_FORMAT}
+ PATH=$PATH:$MPI_DIR/bin
+ export MANPATH=$MPI_DIR/man:$MANPATH
+ export MPI_INCDIR=$MPI_DIR/include
+ export MPI_LIBDIR=$MPI_DIR/lib
+ export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MPI_LIBDIR}
+
+6. Install ParMetis (http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview)
+
+ a. Untar the source and edit the Makefile.in.
+ b. Set the CC, COPTIONS, INCDIR, LD, and LIBDIR variables.
+
+ CC = gcc
+ COPTIONS = -DNDEBUG -fPIC
+ INCDIR = -I${MPI_INCDIR}
+ LIBDIR = -L${MPI_LIBDIR} -lmpich -lpmpich
+
+ c. Edit the ParMETISLib/stdheaders.h file
+
+ Comment out the line #include <malloc.h> since this is not a
+ standard header file and not present in OS X 10.5.
+
+ d. Create shared libraries by hand.
+
+ Note: It is important to specify the full path for the .dylib files.
+
+ cd ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/lib
+ mkdir tmp
+ cd tmp
+ ar -x ../libmetis.a
+ gcc -o ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/lib/libmetis.dylib -dynamiclib -single_module -undefined dynamic_lookup *.o
+ rm *
+ ar -x ../libparmetis.a
+ gcc -o ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/lib/libparmetis.dylib -dynamiclib -single_module -undefined dynamic_lookup *.o
+ rm *
+ cd ..
+ rmdir tmp
+
+ e. Copy parmetis.h to the install location.
+
+ cp parmetis.h ${TOOLS_DIR}/parmetis-3.1/${TOOLS_FORMAT}/include/
+
+ f. Set environment variables.
+
+ PARMETIS_DIR=$TOOLS_DIR/parmetis-3.1/${TOOLS_FORMAT}
+ export PARMETIS_INCDIR=$PARMETIS_DIR/include
+ export PARMETIS_LIBDIR=$PARMETIS_DIR/lib
+ export PARMETIS_LIBS="-lparmetis -lmetis"
+ export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${PARMETIS_LIBDIR}
+
+7. Install FIAT (http://www.fenics.org/wiki/FIAT)
+
+ a. Install FIAT.
+
+ python setup.py install --prefix=$TOOLS_DIR/fiat-0.3.1/${TOOLS_FORMAT}
+
+ b. Set environment variables.
+
+ FIAT_DIR=${TOOLS_DIR}/fiat-0.3.4/${TOOLS_FORMAT}
+ export PYTHONPATH=${PYTHONPATH}:${FIAT_DIR}/lib/python${PYTHON_VERSION}/site-packages
+
+8. Install the development version of PETSc
+ (http://www-unix.mcs.anl.gov/petsc/petsc-as/)
+
+ a. Clone the source repository.
+
+ hg clone http://petsc.cs.iit.edu/petsc/petsc-dev
+ cd petsc-dev/config
+ hg clone http://petsc.cs.iit.edu/petsc/BuildSystem BuildSystem
+
+
+ b. Set PETSC_ARCH and PETSC_DIR environment variables.
+
+ export PETSC_DIR=${TOOLS_DIR}/petsc-dev
+ export PETSC_ARCH=osx_${TOOLS_FORMAT}_debug
+
+ c. Configure PETSc, build, and test.
+
+ ARCH_FLAGS="--PETSC_ARCH=osx_${TOOLS_FORMAT}_debug --with-debugging=1"
+ LANG_FLAGS="--with-clanguage=c++"
+ BUILD_FLAGS="--with-mpi-compilers=0 --with-gnu-compilers=1 --with-shared=1 --with-dynamic=1 --with-64-bit-points=1 --with-large-file-io=1 --CC=gcc --CXX=g++"
+ MPI_FLAGS="--with-mpi-dir=/sw/tools/mpich2-1.1.1/gcc-4.0 --with-mpi-shared=0"
+ OPTIONS="--with-lgrind=0 --download-tetgen"
+ PART_FLAGS="--with-chaco=1 --download-chaco=1 --with-parmetis=1 --with-parmetis-dir=/sw/tools/parmetis-3.1/gcc-4.0"
+ SIEVE_FLAGS="--with-sieve=1 --with-boost=1 --download-boost=1"
+ config/configure.py ${ARCH_FLAGS} ${LANG_FLAGS} ${BUILD_FLAGS} ${MPI_FLAGS} ${OPTIONS} ${PART_FLAGS} ${SIEVE_FLAGS} ${EXTRA_FLAGS}
+ make
+ make test
+
+9. Install pythia.
+
+ a. Download the source code from the SVN repository.
+
+ svn co http://geodynamics.org/svn/cig/cs/pythia/trunk pythia
+
+ b. Install the software.
+
+ python setup.py install --prefix=${CIG_DIR}
+
+ c. Set environment variables.
+
+ export PYTHIA_INCDIR=${CIG_INCDIR}/pythia-0.8
+
+10. Install nemesis.
+
+ a. Download the source code from the SVN repository.
+
+ svn co http://geodynamics.org/svn/cig/cs/nemesis/trunk nemesis
+
+ b. Create the configure script.
+
+ autoreconf -if
+
+ c. Run configure, build, and install.
+
+ ./configure --prefix=${CIG_DIR} CPPFLAGS="-I${CIG_INCDIR} -I${MPI_INCDIR}" LDFLAGS="-L${CIG_LIBDIR} -L${MPI_LIBDIR}" LIBS="-lpmpich -lmpich" CC=gcc CXX=g++
+ make
+ make install
+
+ If you get an error about the architecture, edit libtool and
+ delete "-arch ppc" or "-arch intel", which ever one is not for
+ your machine.
+
+11. Install PROJ.4 (http://trac.osgeo.org/proj/)
+
+ a. Download the source code AND the datum shifts (proj-datumgrid-1.4.zip).
+
+ b. Untar the source code and unzip the datum shifts in the nad directory.
+
+ c. Run configure and build.
+
+ ./configure --prefix=${TOOLS_DIR}/proj-4.6.1/${TOOLS_FORMAT}
+ make
+ make install
+
+ d. Set environment variables.
+
+ PROJ4_DIR=${TOOLS_DIR}/proj-4.6.1/${TOOLS_FORMAT}
+ export PROJ4_LIBDIR=${PROJ4_DIR}/lib
+ export PROJ4_INCDIR=${PROJ4_DIR}/include
+ PATH=${PATH}:${PROJ4_DIR}/bin
+ export MANPATH=${MANPATH}:${PROJ4_DIR}/man
+
+12. Install spatialdata.
+
+ a. Download the source code from the SVN repository.
+
+ svn co http://geodynamics.org/svn/cig/cs/spatialdata-0.1/trunk spatialdata
+
+ b. Create the configure script.
+
+ autoreconf -if
+
+ c. Run configure, build, install, and the unit tests.
+
+ ./configure --enable-testing --enable-pythia --prefix=${CIG_DIR} CPPFLAGS="-I${PROJ4_INCDIR} -I${CPPUNIT_INCDIR} -I${CIG_INCDIR}" LDFLAGS="-L${PROJ4_LIBDIR} -L${CPPUNIT_LIBDIR} -L${CIG_LIBDIR} " LIBS="" CC=gcc CXX=g++
+ make
+ make install
+ make check
+
+13. Install PyLith.
+
+ a. Download the source code from the SVN repository.
+
+ svn co http://geodynamics.org/svn/cig/short/3D/PyLith/trunk pylith
+
+ b. Create the configure script.
+
+ autoreconf -if
+
+ c. Run configure, build, install, and the unit tests.
+
+ ./configure --enable-testing --enable-tetgen --enable-cubit --prefix=${CIG_DIR} CPPFLAGS="-I${PROJ4_INCDIR} -I${CPPUNIT_INCDIR} -I${CIG_INCDIR} -I/sw/include" LDFLAGS="-L${PROJ4_LIBDIR} -L${CPPUNIT_LIBDIR} -L${CIG_LIBDIR} -L/sw/lib" LIBS="" CC=gcc CXX=g++ CFLAGS="-g -O" CXXFLAGS="-g -O"
+ make
+ make install
+ make check
+
Added: short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_MacPorts_bash.sh
===================================================================
--- short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_MacPorts_bash.sh (rev 0)
+++ short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_MacPorts_bash.sh 2009-08-18 03:50:47 UTC (rev 15553)
@@ -0,0 +1,48 @@
+# Environment variables for Bash Shells associated with Brad Aagaard's
+# install of PyLith on a MacBookPro running OS X 10.5
+
+# General
+export TOOLS_DIR=/tools
+export TOOLS_FORMAT=gcc-4.0
+export PYTHON_VERSION=2.5
+
+# Location for installation of CIG software
+export CIG_DIR=$HOME/tools/cig/${TOOLS_FORMAT}
+export CIG_INCDIR=${CIG_DIR}/include
+export CIG_LIBDIR=${CIG_DIR}/lib
+PATH=$PATH:${CIG_DIR}/bin
+export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${CIG_LIBDIR}
+export PYTHONPATH=${PYTHONPATH}:${CIG_LIBDIR}/python${PYTHON_VERSION}/site-packages
+
+# MPICH2
+export MPI_DIR=$TOOLS_DIR/mpich2-1.1.1/${TOOLS_FORMAT}
+PATH=$PATH:$MPI_DIR/bin
+export MANPATH=$MPI_DIR/man:$MANPATH
+export MPI_INCDIR=$MPI_DIR/include
+export MPI_LIBDIR=$MPI_DIR/lib
+export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MPI_LIBDIR}
+
+# ParMetis
+PARMETIS_DIR=$TOOLS_DIR/parmetis-3.1/${TOOLS_FORMAT}
+export PARMETIS_INCDIR=$PARMETIS_DIR/include
+export PARMETIS_LIBDIR=$PARMETIS_DIR/lib
+export PARMETIS_LIBS="-lparmetis -lmetis"
+export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${PARMETIS_LIBDIR}
+
+# FIAT
+FIAT_DIR=${TOOLS_DIR}/fiat-0.3.4/${TOOLS_FORMAT}
+export PYTHONPATH=${PYTHONPATH}:${FIAT_DIR}/lib/python${PYTHON_VERSION}/site-packages
+
+# PETSc
+export PETSC_DIR=${TOOLS_DIR}/petsc-dev
+export PETSC_ARCH=osx_${TOOLS_FORMAT}_debug
+
+# Pythia
+export PYTHIA_INCDIR=${CIG_INCDIR}/pythia-0.8
+
+# Proj.4
+PROJ4_DIR=${TOOLS_DIR}/proj-4.6.1/${TOOLS_FORMAT}
+export PROJ4_LIBDIR=${PROJ4_DIR}/lib
+export PROJ4_INCDIR=${PROJ4_DIR}/include
+PATH=${PATH}:${PROJ4_DIR}/bin
+export MANPATH=${MANPATH}:${PROJ4_DIR}/man
Deleted: short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_bash.sh
===================================================================
--- short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_bash.sh 2009-08-17 20:06:42 UTC (rev 15552)
+++ short/3D/PyLith/trunk/doc/install/MacBookPro_Aagaard_bash.sh 2009-08-18 03:50:47 UTC (rev 15553)
@@ -1,67 +0,0 @@
-# Environment variables for Bash Shells associated with Brad Aagaard's
-# install of PyLith on a MacBookPro running OS X 10.4
-
-# General
-export TOOLS_DIR=/sw/tools
-export TOOLS_FORMAT=gcc-4.0
-export PYTHON_VERSION=2.5
-
-# Location for installation of CIG software
-export CIG_DIR=$HOME/tools/cig/${TOOLS_FORMAT}
-export CIG_INCDIR=${CIG_DIR}/include
-export CIG_LIBDIR=${CIG_DIR}/lib
-PATH=$PATH:${CIG_DIR}/bin
-export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${CIG_LIBDIR}
-export PYTHONPATH=${PYTHONPATH}:${CIG_LIBDIR}/python${PYTHON_VERSION}/site-packages
-
-# Python 2.5.1
-PATH=/Library/Frameworks/Python.framework/Versions/Current/bin:${PATH}
-
-# Mecurial
-MERCURIAL_DIR=${TOOLS_DIR}/mercurial-0.9.4/${TOOLS_FORMAT}
-export PATH=${PATH}:${MERCURIAL_DIR}/bin
-export PYTHONPATH=${PYTHONPATH}:${MERCURIAL_DIR}/lib/python${PYTHON_VERSION}/site-packages
-
-# MPICH2
-export MPI_DIR=$TOOLS_DIR/mpich2-1.0.5/${TOOLS_FORMAT}
-PATH=$PATH:$MPI_DIR/bin
-export MANPATH=$MPI_DIR/man:$MANPATH
-export MPI_INCDIR=$MPI_DIR/include
-export MPI_LIBDIR=$MPI_DIR/lib
-export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${MPI_LIBDIR}
-
-# ParMetis
-PARMETIS_DIR=$TOOLS_DIR/parmetis-3.1/${TOOLS_FORMAT}
-export PARMETIS_INCDIR=$PARMETIS_DIR/include
-export PARMETIS_LIBDIR=$PARMETIS_DIR/lib
-export PARMETIS_LIBS="-lparmetis -lmetis"
-export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${PARMETIS_LIBDIR}
-
-# Cppunit
-CPPUNIT_DIR=${TOOLS_DIR}/cppunit-1.12.0/${TOOLS_FORMAT}
-PATH=${PATH}:${CPPUNIT_DIR}/bin
-export CPPUNIT_LIBDIR=${CPPUNIT_DIR}/lib
-export CPPUNIT_INCDIR=${CPPUNIT_DIR}/include
-export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${CPPUNIT_LIBDIR}
-
-# FIAT
-FIAT_DIR=${TOOLS_DIR}/fiat-0.3.1/${TOOLS_FORMAT}
-export PYTHONPATH=${PYTHONPATH}:${FIAT_DIR}/lib/python${PYTHON_VERSION}/site-packages
-
-# PETSc
-export PETSC_DIR=${TOOLS_DIR}/petsc-dev
-export PETSC_ARCH=osx_${TOOLS_FORMAT}_debug
-
-# SWIG
-SWIG_DIR=${TOOLS_DIR}/swig-1.3.39/${TOOLS_FORMAT}
-PATH=${PATH}:${SWIG_DIR}/bin
-
-# Pythia
-export PYTHIA_INCDIR=${CIG_INCDIR}/pythia-0.8
-
-# Proj.4
-PROJ4_DIR=${TOOLS_DIR}/proj-4.5.0/${TOOLS_FORMAT}
-export PROJ4_LIBDIR=${PROJ4_DIR}/lib
-export PROJ4_INCDIR=${PROJ4_DIR}/include
-PATH=${PATH}:${PROJ4_DIR}/bin
-export MANPATH=${MANPATH}:${PROJ4_DIR}/man
More information about the CIG-COMMITS
mailing list