[cig-commits] r14357 - in short/3D/PyLith/branches/pylith-swig/modulesrc: bc feassemble materials

brad at geodynamics.org brad at geodynamics.org
Mon Mar 16 16:22:25 PDT 2009


Author: brad
Date: 2009-03-16 16:22:25 -0700 (Mon, 16 Mar 2009)
New Revision: 14357

Removed:
   short/3D/PyLith/branches/pylith-swig/modulesrc/bc/bc.pyxe.src
   short/3D/PyLith/branches/pylith-swig/modulesrc/feassemble/feassemble.pyxe.src
   short/3D/PyLith/branches/pylith-swig/modulesrc/materials/materials.pyxe.src
Log:
Removed old module files.

Deleted: short/3D/PyLith/branches/pylith-swig/modulesrc/bc/bc.pyxe.src
===================================================================
--- short/3D/PyLith/branches/pylith-swig/modulesrc/bc/bc.pyxe.src	2009-03-16 23:17:30 UTC (rev 14356)
+++ short/3D/PyLith/branches/pylith-swig/modulesrc/bc/bc.pyxe.src	2009-03-16 23:22:25 UTC (rev 14357)
@@ -1,1763 +0,0 @@
-# -*- Pyrex -*-
-#
-# ======================================================================
-#
-#                           Brad T. Aagaard
-#                        U.S. Geological Survey
-#
-# {LicenseText}
-#
-# ======================================================================
-#
-
-#header{
-#include "pylith/bc/BoundaryCondition.hh"
-#include "pylith/bc/AbsorbingDampers.hh"
-#include "pylith/bc/DirichletPoints.hh"
-#include "pylith/bc/DirichletBoundary.hh"
-#include "pylith/bc/Neumann.hh"
-
-#include "pylith/utils/array.hh"
-
-#include <assert.h>
-#include <stdexcept>
-#include <Python.h>
-#}header
-
-# ----------------------------------------------------------------------
-cdef extern from "Python.h":
-  object PyCObject_FromVoidPtr(void*, void (*destruct)(void*))
-  void* PyCObject_AsVoidPtr(object)
-
-cdef void* ptrFromHandle(obj):
-  """Extract pointer from PyCObject."""
-  return PyCObject_AsVoidPtr(obj.handle)
-
-cdef extern from "stdlib.h":
-  ctypedef unsigned long size_t
-  void* malloc(size_t size)
-  void free(void* mem)
-
-# ----------------------------------------------------------------------
-cdef void BoundaryCondition_destructor(void* obj):
-  """
-  Destroy BoundaryCondition object.
-  """
-  # create shim for destructor
-  #embed{ void BoundaryCondition_destructor_cpp(void* objVptr)
-  pylith::bc::BoundaryCondition* pM = (pylith::bc::BoundaryCondition*) objVptr;
-  delete pM;
-  #}embed
-  BoundaryCondition_destructor_cpp(obj)
-  return
-
-
-cdef class BoundaryCondition:
-
-  cdef void* thisptr # Pointer to C++ object
-  cdef readonly object handle # PyCObject holding pointer to C++ object
-  cdef readonly object name # Identifier for object base type
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    self.handle = None
-    self.thisptr = NULL
-    self.name = "pylith_bc_BoundaryCondition"
-    return
-
-
-  def verifyConfiguration(self, mesh):
-    """
-    Verify compatibility of configuration settings.
-    """
-    # create shim for method 'verifyConfiguration'
-    #embed{ void BoundaryCondition_verifyConfiguration(void* objVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::bc::BoundaryCondition*) objVptr)->verifyConfiguration(*mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'pylith::topology::Mesh'."
-    BoundaryCondition_verifyConfiguration(self.thisptr, ptrFromHandle(mesh))
-    return
-
-
-  def initialize(self, mesh, cs, upDir):
-    """
-    Initialize boundary condition.
-    """
-    # create shim for method 'initialize'
-    #embed{ void BoundaryCondition_initialize(void* objVptr, void* meshVptr, void* csVptr, double* upDirPtr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != meshVptr);
-      assert(0 != csVptr);
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      spatialdata::geocoords::CoordSys* cs =
-        (spatialdata::geocoords::CoordSys*) csVptr;
-      pylith::double_array upDir(3);
-      upDir[0] = upDirPtr[0];
-      upDir[1] = upDirPtr[1];
-      upDir[2] = upDirPtr[2];
-      ((pylith::bc::BoundaryCondition*) objVptr)->initialize(*mesh, cs, upDir);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'pylith::topology::Mesh'."
-    if not cs.name == "spatialdata_geocoords_CoordSys":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'spatialdata::geocoords::CoordSys'."
-    if 3 != len(upDir):
-      raise TypeError, \
-            "Argument 'upDir' must be a 3 vector (list)."
-    cdef double upDirCpp[3]
-    upDirCpp[0] = upDir[0]
-    upDirCpp[1] = upDir[1]
-    upDirCpp[2] = upDir[2]
-    BoundaryCondition_initialize(self.thisptr, ptrFromHandle(mesh), ptrFromHandle(cs), upDirCpp)
-    return
-
-
-  def _createHandle(self):
-    """
-    Wrap pointer to C++ object in PyCObject.
-    """
-    return PyCObject_FromVoidPtr(self.thisptr, BoundaryCondition_destructor)
-
-
-  property label:
-    def __set__(self, value):
-      """
-      Set label of material.
-      """
-      # create shim for method 'label'
-      #embed{ void BoundaryCondition_label_set(void* objVptr, char* value)
-      try {
-        assert(0 != objVptr);
-        ((pylith::bc::BoundaryCondition*) objVptr)->label(value);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      BoundaryCondition_label_set(self.thisptr, value)
-
-
-  property db:
-    def __set__(self, value):
-      """
-      Set spatial database for parameters.
-      """
-      # create shim for method 'db'
-      #embed{ void BoundaryCondition_db_set(void* objVptr, void* dbVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dbVptr);
-        spatialdata::spatialdb::SpatialDB* db =
-          (spatialdata::spatialdb::SpatialDB*) dbVptr;
-        ((pylith::bc::BoundaryCondition*) objVptr)->db(db);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_spatialdb_SpatialDB":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::spatialdb::SpatialDB'."
-      BoundaryCondition_db_set(self.thisptr, ptrFromHandle(value))
-
-
-# ----------------------------------------------------------------------
-cdef class DirichletPoints(BoundaryCondition):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* DirichletPoints_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::bc::DirichletPoints);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    BoundaryCondition.__init__(self)
-    self.thisptr = DirichletPoints_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-  property referenceTime:
-    def __set__(self, value):
-      """
-      Set reference time for rate of change of values.
-      """
-      # create shim for method 'referenceTime'
-      #embed{ void DirichletPoints_referenceTime_set(void* objVptr, double value)
-      try {
-        assert(0 != objVptr);
-        ((pylith::bc::DirichletPoints*) objVptr)->referenceTime(value);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      DirichletPoints_referenceTime_set(self.thisptr, value)
-
-
-  property dbRate:
-    def __set__(self, value):
-      """
-      Set spatial database for parameters of rate of change of values.
-      """
-      # create shim for method 'dbRate'
-      #embed{ void DirichletPoints_dbRate_set(void* objVptr, void* dbVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dbVptr);
-        spatialdata::spatialdb::SpatialDB* db =
-          (spatialdata::spatialdb::SpatialDB*) dbVptr;
-        ((pylith::bc::DirichletPoints*) objVptr)->dbRate(db);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_spatialdb_SpatialDB":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::spatialdb::SpatialDB'."
-      DirichletPoints_dbRate_set(self.thisptr, ptrFromHandle(value))
-
-
-  property fixedDOF:
-    def __set__(self, value):
-      """
-      Set fixed DOF.
-      """
-      # create shim for method 'fixedDOF'
-      #embed{ void DirichletPoints_fixedDOF_set(void* objVptr, int* dofVptr, int numFixedDOF)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dofVptr);
-        pylith::int_array fixedDOF((int*) dofVptr, numFixedDOF);
-        ((pylith::bc::DirichletPoints*) objVptr)->fixedDOF(fixedDOF);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      cdef int* fixedDOF
-      numFixedDOF = len(value)
-      fixedDOF = <int*> malloc(numFixedDOF*sizeof(int))
-      assert(fixedDOF != NULL)
-      for i from 0 <= i < numFixedDOF:
-        fixedDOF[i] = value[i]
-      DirichletPoints_fixedDOF_set(self.thisptr, fixedDOF, numFixedDOF)
-      free(fixedDOF)
-
-
-  property normalizer:
-    def __set__(self, value):
-      """
-      Set nondimensionalizer.
-      """
-      # create shim for method 'normalizer'
-      #embed{ void DirichletPoints_normalizer_set(void* objVptr, void* dimVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dimVptr);
-        spatialdata::units::Nondimensional* dim =
-          (spatialdata::units::Nondimensional*) dimVptr;
-        ((pylith::bc::DirichletPoints*) objVptr)->normalizer(*dim);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_units_Nondimensional":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::units::Nondimensional'."
-      DirichletPoints_normalizer_set(self.thisptr, ptrFromHandle(value))
-
-
-  def setConstraintSizes(self, field, mesh):
-    """
-    Set number of degrees of freedom that are constrained at points in field.
-    """
-    # create shim for method 'setConstraintSizes'
-    #embed{ void DirichletPoints_setConstraintSizes(void* objVptr, void* fieldVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::real_section_type>* field = (ALE::Obj<pylith::real_section_type>*) fieldVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::bc::DirichletPoints*) objVptr)->setConstraintSizes(*field, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'pylith::topology::Mesh'."
-    DirichletPoints_setConstraintSizes(self.thisptr, PyCObject_AsVoidPtr(field),
-                                  ptrFromHandle(mesh))
-    return
-
-
-  def setConstraints(self, field, mesh):
-    """
-    Set which degrees of freedom that are constrained at points in field.
-    """
-    # create shim for method 'setConstraints'
-    #embed{ void DirichletPoints_setConstraints(void* objVptr, void* fieldVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::real_section_type>* field = (ALE::Obj<pylith::real_section_type>*) fieldVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::bc::DirichletPoints*) objVptr)->setConstraints(*field, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'pylith::topology::Mesh'."
-    DirichletPoints_setConstraints(self.thisptr, PyCObject_AsVoidPtr(field), ptrFromHandle(mesh))
-    return
-
-
-  def setField(self, t, field, mesh):
-    """
-    Set values in field.
-    """
-    # create shim for method 'setField'
-    #embed{ void DirichletPoints_setField(void* objVptr, double t, void* fieldVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::real_section_type>* field = (ALE::Obj<pylith::real_section_type>*) fieldVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::bc::DirichletPoints*) objVptr)->setField(t, *field, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'pylith::topology::Mesh'."
-    DirichletPoints_setField(self.thisptr, t, PyCObject_AsVoidPtr(field),
-                          ptrFromHandle(mesh))
-    return
-
-
-  property useSolnIncr:
-    def __set__(self, flag):
-      """
-      Set solution increment flag.
-      """
-      # create shim for method 'useSolnIncr'
-      #embed{ void DirichletPoints_useSolnIncr_set(void* objVptr, int flag)
-      try {
-        assert(0 != objVptr);
-        ((pylith::bc::DirichletPoints*) objVptr)->useSolnIncr(flag);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      DirichletPoints_useSolnIncr_set(self.thisptr, flag)
-
-
-# ----------------------------------------------------------------------
-cdef class DirichletBoundary(BoundaryCondition):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* DirichletBoundary_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::bc::DirichletBoundary);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    BoundaryCondition.__init__(self)
-    self.thisptr = DirichletBoundary_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-  property referenceTime:
-    def __set__(self, value):
-      """
-      Set reference time for rate of change of values.
-      """
-      # create shim for method 'referenceTime'
-      #embed{ void DirichletBoundary_referenceTime_set(void* objVptr, double value)
-      try {
-        assert(0 != objVptr);
-        ((pylith::bc::DirichletBoundary*) objVptr)->referenceTime(value);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      DirichletBoundary_referenceTime_set(self.thisptr, value)
-
-
-  property dbRate:
-    def __set__(self, value):
-      """
-      Set spatial database for parameters of rate of change of values.
-      """
-      # create shim for method 'dbRate'
-      #embed{ void DirichletBoundary_dbRate_set(void* objVptr, void* dbVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dbVptr);
-        spatialdata::spatialdb::SpatialDB* db =
-          (spatialdata::spatialdb::SpatialDB*) dbVptr;
-        ((pylith::bc::DirichletBoundary*) objVptr)->dbRate(db);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_spatialdb_SpatialDB":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::spatialdb::SpatialDB'."
-      DirichletBoundary_dbRate_set(self.thisptr, ptrFromHandle(value))
-
-
-  property fixedDOF:
-    def __set__(self, value):
-      """
-      Set fixed DOF.
-      """
-      # create shim for method 'fixedDOF'
-      #embed{ void DirichletBoundary_fixedDOF_set(void* objVptr, int* dofVptr, int numFixedDOF)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dofVptr);
-        pylith::int_array fixedDOF((int*) dofVptr, numFixedDOF);
-        ((pylith::bc::DirichletBoundary*) objVptr)->fixedDOF(fixedDOF);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      cdef int* fixedDOF
-      numFixedDOF = len(value)
-      fixedDOF = <int*> malloc(numFixedDOF*sizeof(int))
-      assert(fixedDOF != NULL)
-      for i from 0 <= i < numFixedDOF:
-        fixedDOF[i] = value[i]
-      DirichletBoundary_fixedDOF_set(self.thisptr, fixedDOF, numFixedDOF)
-      free(fixedDOF)
-
-
-  property normalizer:
-    def __set__(self, value):
-      """
-      Set nondimensionalizer.
-      """
-      # create shim for method 'normalizer'
-      #embed{ void DirichletBoundary_normalizer_set(void* objVptr, void* dimVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dimVptr);
-        spatialdata::units::Nondimensional* dim =
-          (spatialdata::units::Nondimensional*) dimVptr;
-        ((pylith::bc::DirichletBoundary*) objVptr)->normalizer(*dim);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_units_Nondimensional":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::units::Nondimensional'."
-      DirichletBoundary_normalizer_set(self.thisptr, ptrFromHandle(value))
-
-
-  def setConstraintSizes(self, field, mesh):
-    """
-    Set number of degrees of freedom that are constrained at points in field.
-    """
-    # create shim for method 'setConstraintSizes'
-    #embed{ void DirichletBoundary_setConstraintSizes(void* objVptr, void* fieldVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::real_section_type>* field = (ALE::Obj<pylith::real_section_type>*) fieldVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::bc::DirichletBoundary*) objVptr)->setConstraintSizes(*field, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'pylith::topology::Mesh'."
-    DirichletBoundary_setConstraintSizes(self.thisptr, PyCObject_AsVoidPtr(field),
-                                  ptrFromHandle(mesh))
-    return
-
-
-  def setConstraints(self, field, mesh):
-    """
-    Set which degrees of freedom that are constrained at points in field.
-    """
-    # create shim for method 'setConstraints'
-    #embed{ void DirichletBoundary_setConstraints(void* objVptr, void* fieldVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::real_section_type>* field = (ALE::Obj<pylith::real_section_type>*) fieldVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::bc::DirichletBoundary*) objVptr)->setConstraints(*field, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'pylith::topology::Mesh'."
-    DirichletBoundary_setConstraints(self.thisptr, PyCObject_AsVoidPtr(field), ptrFromHandle(mesh))
-    return
-
-
-  def setField(self, t, field, mesh):
-    """
-    Set values in field.
-    """
-    # create shim for method 'setField'
-    #embed{ void DirichletBoundary_setField(void* objVptr, double t, void* fieldVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::real_section_type>* field = (ALE::Obj<pylith::real_section_type>*) fieldVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::bc::DirichletBoundary*) objVptr)->setField(t, *field, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'pylith::topology::Mesh'."
-    DirichletBoundary_setField(self.thisptr, t, PyCObject_AsVoidPtr(field),
-                          ptrFromHandle(mesh))
-    return
-
-
-  def boundaryMesh(self, mesh):
-    """
-    Get mesh associated with fields over boundary.
-    """
-    # create shim for method 'boundaryMesh'
-    #embed{ void DirichletBoundary_boundaryMesh(void* objVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::SubMesh>* mesh = (ALE::Obj<pylith::SubMesh>*) meshVptr;
-      *mesh = ((pylith::bc::DirichletBoundary*) objVptr)->boundaryMesh();
-      } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type " \
-            "'pylith::topology::Mesh'."
-    DirichletBoundary_boundaryMesh(self.thisptr, ptrFromHandle(mesh))
-    return
-    
-
-  def vertexField(self, name, mesh, fields=None):
-    """
-    Get cell field.
-    """
-    # create shim for method 'vertexField'
-    #embed{ void* DirichletBoundary_vertexField(void* objVptr, int* fieldPtr, char* name, void* meshVptr, void* fieldsVptr)
-    void* result = 0;
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldPtr);
-      assert(0 != name);
-      assert(0 != meshVptr);
-      pylith::bc::DirichletBoundary* bc = (pylith::bc::DirichletBoundary*) objVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      pylith::VectorFieldEnum fieldType;
-      const ALE::Obj<pylith::real_section_type>& field =
-        bc->vertexField(&fieldType, name, *mesh, fields);
-      *fieldPtr = fieldType;
-      result = (void*) &field;
-      } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type " \
-            "'pylith::topology::Mesh'."
-    if None != fields:
-      if not fields.name == "pylith_topology_FieldsManager":
-        raise TypeError, \
-              "Argument 'fields' must be extension module type " \
-              "'pylith::topology::FieldsManager'."
-    cdef void* ptr
-    cdef int fieldType
-    if None != fields:
-      ptr = DirichletBoundary_vertexField(self.thisptr, &fieldType, name,
-                              ptrFromHandle(mesh), ptrFromHandle(fields))
-    else:
-      ptr = DirichletBoundary_vertexField(self.thisptr, &fieldType, name,
-                              ptrFromHandle(mesh), NULL)
-    return (PyCObject_FromVoidPtr(ptr, NULL), fieldType)
-    
-
-  property useSolnIncr:
-    def __set__(self, flag):
-      """
-      Set solution increment flag.
-      """
-      # create shim for method 'useSolnIncr'
-      #embed{ void DirichletBoundary_useSolnIncr_set(void* objVptr, int flag)
-      try {
-        assert(0 != objVptr);
-        ((pylith::bc::DirichletBoundary*) objVptr)->useSolnIncr(flag);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      DirichletBoundary_useSolnIncr_set(self.thisptr, flag)
-
-
-# ----------------------------------------------------------------------
-cdef class AbsorbingDampers(BoundaryCondition):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* AbsorbingDampers_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::bc::AbsorbingDampers);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-    BoundaryCondition.__init__(self)
-    self.thisptr = AbsorbingDampers_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-  def integrateResidual(self, residual, t, fields, mesh, cs):
-    """
-    Integrate contributions to residual term (r) for operator.
-    """
-    # create shim for method 'integrateResidual'
-    #embed{ void AbsorbingDampers_integrateResidual(void* objVptr, void* residualVptr, double t, void* fieldsVptr, void* meshVptr, void* csVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != residualVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      assert(0 != csVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ALE::Obj<pylith::real_section_type>* residual =
-        (ALE::Obj<pylith::real_section_type>*) residualVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      spatialdata::geocoords::CoordSys* cs =
-        (spatialdata::geocoords::CoordSys*) csVptr;
-      ((pylith::bc::AbsorbingDampers*) objVptr)->integrateResidual(*residual,
-                                                            t, fields, *mesh, cs);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type 'Mesh'."
-    AbsorbingDampers_integrateResidual(self.thisptr, 
-                                 PyCObject_AsVoidPtr(residual),
-                                 t,
-                                 ptrFromHandle(fields),
-                                 ptrFromHandle(mesh),
-				 ptrFromHandle(cs))
-    return
-
-
-  def integrateJacobian(self, mat, t, fields, mesh):
-    """
-    Compute contributions to Jacobian matrix (A) associated with operator.
-    """
-    # create shim for method 'integrateJacobian'
-    #embed{ void AbsorbingDampers_integrateJacobian(void* objVptr, void* matVptr, double t, void* fieldsVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != matVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      PetscMat* mat = (PetscMat*) matVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      ((pylith::bc::AbsorbingDampers*) objVptr)->integrateJacobian(
-                                                        mat, t, fields, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type 'Mesh'."
-    AbsorbingDampers_integrateJacobian(self.thisptr,
-                                 PyCObject_AsVoidPtr(mat),
-                                 t,
-                                 ptrFromHandle(fields),
-                                 ptrFromHandle(mesh))
-    return
-
-
-  def integrateResidualAssembled(self, residual, t, fields, mesh, cs):
-    """
-    Integrate contributions to residual term (r) for operator that do
-    not require assembly over cells, vertices, or processors.
-    """
-    # create shim for method 'integrateResidualAssembled'
-    #embed{ void AbsorbingDampers_integrateResidualAssembled(void* objVptr, void* residualVptr, double t, void* fieldsVptr, void* meshVptr, void* csVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != residualVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      assert(0 != csVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ALE::Obj<pylith::real_section_type>* residual =
-        (ALE::Obj<pylith::real_section_type>*) residualVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      spatialdata::geocoords::CoordSys* cs =
-        (spatialdata::geocoords::CoordSys*) csVptr;
-      ((pylith::bc::AbsorbingDampers*) objVptr)->integrateResidualAssembled(*residual,
-                                                            t, fields, *mesh, cs);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type 'Mesh'."
-    AbsorbingDampers_integrateResidualAssembled(self.thisptr, 
-                                                PyCObject_AsVoidPtr(residual),
-                                                t,
-                                                ptrFromHandle(fields),
-                                                ptrFromHandle(mesh),
-                                                ptrFromHandle(cs))
-    return
-
-
-  def integrateJacobianAssembled(self, mat, t, fields, mesh):
-    """
-    Compute contributions to Jacobian matrix (A) associated with
-    operator that do not require assembly over cells, vertices, or
-    processors.
-    """
-    # create shim for method 'integrateJacobianAssembled'
-    #embed{ void AbsorbingDampers_integrateJacobianAssembled(void* objVptr, void* matVptr, double t, void* fieldsVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != matVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      PetscMat* mat = (PetscMat*) matVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      ((pylith::bc::AbsorbingDampers*) objVptr)->integrateJacobianAssembled(
-                                                        mat, t, fields, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type 'Mesh'."
-    AbsorbingDampers_integrateJacobianAssembled(self.thisptr,
-                                                PyCObject_AsVoidPtr(mat),
-                                                t,
-                                                ptrFromHandle(fields),
-                                                ptrFromHandle(mesh))
-    return
-
-
-  def updateState(self, t, fields, mesh):
-    """
-    Update state variables as needed.
-    """
-    # create shim for method 'updateState'
-    #embed{ void AbsorbingDampers_updateState(void* objVptr, double t, void* fieldsVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::bc::AbsorbingDampers*) objVptr)->updateState(t, fields, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if fields.name != "pylith_topology_FieldsManager":
-      raise TypeError, \
-            "Argument 'fields' must be extension module type 'FieldsManager'."
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type 'Mesh'."
-    AbsorbingDampers_updateState(self.thisptr,
-                           t,
-                           ptrFromHandle(fields),
-                           ptrFromHandle(mesh))
-    return
-
-
-  def _createHandle(self):
-    """
-    Wrap pointer to C++ object in PyCObject.
-    """
-    return PyCObject_FromVoidPtr(self.thisptr, BoundaryCondition_destructor)
-
-
-  property quadrature:
-    def __set__(self, q):
-      """
-      Set quadrature.
-      """
-      # create shim for method 'quadrature'
-      #embed{ void AbsorbingDampers_quadrature_set(void* objVptr, void* qVptr)
-      try {
-        assert(0 != objVptr);
-        pylith::feassemble::Quadrature* quadrature =
-          (pylith::feassemble::Quadrature*) qVptr;
-        ((pylith::bc::AbsorbingDampers*) objVptr)->quadrature(quadrature);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not q.name == "pylith_feassemble_Quadrature":
-        raise TypeError, \
-              "Argument must be extension module type 'Quadrature'."
-      AbsorbingDampers_quadrature_set(self.thisptr, ptrFromHandle(q))
-
-
-  property normalizer:
-    def __set__(self, value):
-      """
-      Set nondimensionalizer.
-      """
-      # create shim for method 'normalizer'
-      #embed{ void AbsorbingDampers_normalizer_set(void* objVptr, void* dimVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dimVptr);
-        spatialdata::units::Nondimensional* dim =
-          (spatialdata::units::Nondimensional*) dimVptr;
-        ((pylith::bc::AbsorbingDampers*) objVptr)->normalizer(*dim);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_units_Nondimensional":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::units::Nondimensional'."
-      AbsorbingDampers_normalizer_set(self.thisptr, ptrFromHandle(value))
-
-
-  property timeStep:
-    def __set__(self, dt):
-      """
-      Set timeStep.
-      """
-      # create shim for method 'timeStep'
-      #embed{ void AbsorbingDampers_timeStep_set(void* objVptr, double dt)
-      try {
-        assert(0 != objVptr);
-        ((pylith::bc::AbsorbingDampers*) objVptr)->timeStep(dt);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      AbsorbingDampers_timeStep_set(self.thisptr, dt)
-
-
-  property stableTimeStep:
-    def __get__(self):
-      """
-      Get stable time step.
-      """
-      # create shim for method 'stableTimeStep'
-      #embed{ double AbsorbingDampers_stableTimeStep_get(void* objVptr)
-      double result = 0.0;
-      try {
-        assert(0 != objVptr);
-        result =
-          ((pylith::bc::AbsorbingDampers*) objVptr)->stableTimeStep();
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      return result;
-      #}embed
-      return AbsorbingDampers_stableTimeStep_get(self.thisptr)
-
-
-  property needNewJacobian:
-    def __get__(self):
-      """
-      Set timeStep.
-      """
-      # create shim for method 'needNewJacobian'
-      #embed{ int AbsorbingDampers_needNewJacobian_get(void* objVptr)
-      int result = 0;
-      try {
-        assert(0 != objVptr);
-        result =
-          ((pylith::bc::AbsorbingDampers*) objVptr)->needNewJacobian();
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      return result;
-      #}embed
-      return AbsorbingDampers_needNewJacobian_get(self.thisptr)
-
-
-  property useSolnIncr:
-    def __set__(self, flag):
-      """
-      Set solution increment flag.
-      """
-      # create shim for method 'useSolnIncr'
-      #embed{ void AbsorbingDampers_useSolnIncr_set(void* objVptr, int flag)
-      try {
-        assert(0 != objVptr);
-        ((pylith::bc::AbsorbingDampers*) objVptr)->useSolnIncr(flag);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      AbsorbingDampers_useSolnIncr_set(self.thisptr, flag)
-
-
-# ----------------------------------------------------------------------
-cdef class Neumann(BoundaryCondition):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* Neumann_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::bc::Neumann);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-    BoundaryCondition.__init__(self)
-    self.thisptr = Neumann_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-    BoundaryCondition.__init__(self)
-    self.thisptr = Neumann_constructor()
-    self.handle = self._createHandle()
-
-
-  def integrateResidual(self, residual, t, fields, mesh, cs):
-    """
-    Integrate contributions to residual term (r) for operator.
-    """
-    # create shim for method 'integrateResidual'
-    #embed{ void Neumann_integrateResidual(void* objVptr, void* residualVptr, double t, void* fieldsVptr, void* meshVptr, void* csVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != residualVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      assert(0 != csVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ALE::Obj<pylith::real_section_type>* residual =
-        (ALE::Obj<pylith::real_section_type>*) residualVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      spatialdata::geocoords::CoordSys* cs =
-        (spatialdata::geocoords::CoordSys*) csVptr;
-      ((pylith::bc::Neumann*) objVptr)->integrateResidual(*residual,
-                                                            t, fields, *mesh, cs);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type 'Mesh'."
-    Neumann_integrateResidual(self.thisptr, 
-                                 PyCObject_AsVoidPtr(residual),
-                                 t,
-                                 ptrFromHandle(fields),
-                                 ptrFromHandle(mesh),
-				 ptrFromHandle(cs))
-    return
-
-
-  def integrateJacobian(self, mat, t, fields, mesh):
-    """
-    Compute contributions to Jacobian matrix (A) associated with operator.
-    """
-    # create shim for method 'integrateJacobian'
-    #embed{ void Neumann_integrateJacobian(void* objVptr, void* matVptr, double t, void* fieldsVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != matVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      PetscMat* mat = (PetscMat*) matVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      ((pylith::bc::Neumann*) objVptr)->integrateJacobian(
-                                                        mat, t, fields, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type 'Mesh'."
-    Neumann_integrateJacobian(self.thisptr,
-                                 PyCObject_AsVoidPtr(mat),
-                                 t,
-                                 ptrFromHandle(fields),
-                                 ptrFromHandle(mesh))
-    return
-
-
-  def integrateResidualAssembled(self, residual, t, fields, mesh, cs):
-    """
-    Integrate contributions to residual term (r) for operator that do
-    not require assembly over cells, vertices, or processors.
-    """
-    # create shim for method 'integrateResidualAssembled'
-    #embed{ void Neumann_integrateResidualAssembled(void* objVptr, void* residualVptr, double t, void* fieldsVptr, void* meshVptr, void* csVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != residualVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      assert(0 != csVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ALE::Obj<pylith::real_section_type>* residual =
-        (ALE::Obj<pylith::real_section_type>*) residualVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      spatialdata::geocoords::CoordSys* cs =
-        (spatialdata::geocoords::CoordSys*) csVptr;
-      ((pylith::bc::Neumann*) objVptr)->integrateResidualAssembled(*residual,
-                                                            t, fields, *mesh, cs);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type 'Mesh'."
-    Neumann_integrateResidualAssembled(self.thisptr, 
-                                       PyCObject_AsVoidPtr(residual),
-                                       t,
-                                       ptrFromHandle(fields),
-                                       ptrFromHandle(mesh),
-                                       ptrFromHandle(cs))
-    return
-
-
-  def integrateJacobianAssembled(self, mat, t, fields, mesh):
-    """
-    Compute contributions to Jacobian matrix (A) associated with
-    operator that do not require assembly over cells, vertices, or
-    processors.
-    """
-    # create shim for method 'integrateJacobianAssembled'
-    #embed{ void Neumann_integrateJacobianAssembled(void* objVptr, void* matVptr, double t, void* fieldsVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != matVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      PetscMat* mat = (PetscMat*) matVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      ((pylith::bc::Neumann*) objVptr)->integrateJacobianAssembled(
-                                                        mat, t, fields, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type 'Mesh'."
-    Neumann_integrateJacobianAssembled(self.thisptr,
-                                       PyCObject_AsVoidPtr(mat),
-                                       t,
-                                       ptrFromHandle(fields),
-                                       ptrFromHandle(mesh))
-    return
-
-
-  def updateState(self, t, fields, mesh):
-    """
-    Update state variables as needed.
-    """
-    # create shim for method 'updateState'
-    #embed{ void Neumann_updateState(void* objVptr, double t, void* fieldsVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::bc::Neumann*) objVptr)->updateState(t, fields, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if fields.name != "pylith_topology_FieldsManager":
-      raise TypeError, \
-            "Argument 'fields' must be extension module type 'FieldsManager'."
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type 'Mesh'."
-    Neumann_updateState(self.thisptr,
-                           t,
-                           ptrFromHandle(fields),
-                           ptrFromHandle(mesh))
-    return
-
-
-  def boundaryMesh(self, mesh):
-    """
-    Get mesh associated with fields over boundary.
-    """
-    # create shim for method 'boundaryMesh'
-    #embed{ void Neumann_boundaryMesh(void* objVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::SubMesh>* mesh = (ALE::Obj<pylith::SubMesh>*) meshVptr;
-      *mesh = ((pylith::bc::Neumann*) objVptr)->boundaryMesh();
-      } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type " \
-            "'pylith::topology::Mesh'."
-    Neumann_boundaryMesh(self.thisptr, ptrFromHandle(mesh))
-    return
-    
-
-  def cellField(self, name, mesh, fields=None):
-    """
-    Get cell field.
-    """
-    # create shim for method 'cellField'
-    #embed{ void* Neumann_cellField(void* objVptr, int* fieldPtr, char* name, void* meshVptr, void* fieldsVptr)
-    void* result = 0;
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldPtr);
-      assert(0 != name);
-      assert(0 != meshVptr);
-      pylith::bc::Neumann* bc = (pylith::bc::Neumann*) objVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      pylith::VectorFieldEnum fieldType;
-      const ALE::Obj<pylith::real_section_type>& field =
-        bc->cellField(&fieldType, name, *mesh, fields);
-      *fieldPtr = fieldType;
-      result = (void*) &field;
-      } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type " \
-            "'pylith::topology::Mesh'."
-    if None != fields:
-      if not fields.name == "pylith_topology_FieldsManager":
-        raise TypeError, \
-              "Argument 'fields' must be extension module type " \
-              "'pylith::topology::FieldsManager'."
-    cdef void* ptr
-    cdef int fieldType
-    if None != fields:
-      ptr = Neumann_cellField(self.thisptr, &fieldType, name,
-                              ptrFromHandle(mesh), ptrFromHandle(fields))
-    else:
-      ptr = Neumann_cellField(self.thisptr, &fieldType, name,
-                              ptrFromHandle(mesh), NULL)
-    return (PyCObject_FromVoidPtr(ptr, NULL), fieldType)
-    
-
-  def _createHandle(self):
-    """
-    Wrap pointer to C++ object in PyCObject.
-    """
-    return PyCObject_FromVoidPtr(self.thisptr, BoundaryCondition_destructor)
-
-
-  property quadrature:
-    def __set__(self, q):
-      """
-      Set quadrature.
-      """
-      # create shim for method 'quadrature'
-      #embed{ void Neumann_quadrature_set(void* objVptr, void* qVptr)
-      try {
-        assert(0 != objVptr);
-        pylith::feassemble::Quadrature* quadrature =
-          (pylith::feassemble::Quadrature*) qVptr;
-        ((pylith::bc::Neumann*) objVptr)->quadrature(quadrature);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not q.name == "pylith_feassemble_Quadrature":
-        raise TypeError, \
-              "Argument must be extension module type 'Quadrature'."
-      Neumann_quadrature_set(self.thisptr, ptrFromHandle(q))
-
-
-  property normalizer:
-    def __set__(self, value):
-      """
-      Set nondimensionalizer.
-      """
-      # create shim for method 'normalizer'
-      #embed{ void Neumann_normalizer_set(void* objVptr, void* dimVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dimVptr);
-        spatialdata::units::Nondimensional* dim =
-          (spatialdata::units::Nondimensional*) dimVptr;
-        ((pylith::bc::Neumann*) objVptr)->normalizer(*dim);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_units_Nondimensional":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::units::Nondimensional'."
-      Neumann_normalizer_set(self.thisptr, ptrFromHandle(value))
-
-
-  property timeStep:
-    def __set__(self, dt):
-      """
-      Set timeStep.
-      """
-      # create shim for method 'timeStep'
-      #embed{ void Neumann_timeStep_set(void* objVptr, double dt)
-      try {
-        assert(0 != objVptr);
-        ((pylith::bc::Neumann*) objVptr)->timeStep(dt);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      Neumann_timeStep_set(self.thisptr, dt)
-
-
-  property stableTimeStep:
-    def __get__(self):
-      """
-      Get stable time step.
-      """
-      # create shim for method 'stableTimeStep'
-      #embed{ double Neumann_stableTimeStep_get(void* objVptr)
-      double result = 0.0;
-      try {
-        assert(0 != objVptr);
-        result =
-          ((pylith::bc::Neumann*) objVptr)->stableTimeStep();
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      return result;
-      #}embed
-      return Neumann_stableTimeStep_get(self.thisptr)
-
-
-  property needNewJacobian:
-    def __get__(self):
-      """
-      Set timeStep.
-      """
-      # create shim for method 'needNewJacobian'
-      #embed{ int Neumann_needNewJacobian_get(void* objVptr)
-      int result = 0;
-      try {
-        assert(0 != objVptr);
-        result =
-          ((pylith::bc::Neumann*) objVptr)->needNewJacobian();
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      return result;
-      #}embed
-      return Neumann_needNewJacobian_get(self.thisptr)
-
-
-  property useSolnIncr:
-    def __set__(self, flag):
-      """
-      Set solution increment flag.
-      """
-      # create shim for method 'useSolnIncr'
-      #embed{ void Neumann_useSolnIncr_set(void* objVptr, int flag)
-      try {
-        assert(0 != objVptr);
-        ((pylith::bc::Neumann*) objVptr)->useSolnIncr(flag);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      Neumann_useSolnIncr_set(self.thisptr, flag)
-
-
-# End of file 
-

Deleted: short/3D/PyLith/branches/pylith-swig/modulesrc/feassemble/feassemble.pyxe.src
===================================================================
--- short/3D/PyLith/branches/pylith-swig/modulesrc/feassemble/feassemble.pyxe.src	2009-03-16 23:17:30 UTC (rev 14356)
+++ short/3D/PyLith/branches/pylith-swig/modulesrc/feassemble/feassemble.pyxe.src	2009-03-16 23:22:25 UTC (rev 14357)
@@ -1,1776 +0,0 @@
-# -*- Pyrex -*-
-#
-# ======================================================================
-#
-#                           Brad T. Aagaard
-#                        U.S. Geological Survey
-#
-# {LicenseText}
-#
-# ======================================================================
-#
-
-#header{
-#include "pylith/feassemble/CellGeometry.hh"
-#include "pylith/feassemble/GeometryPoint1D.hh"
-#include "pylith/feassemble/GeometryPoint2D.hh"
-#include "pylith/feassemble/GeometryPoint3D.hh"
-#include "pylith/feassemble/GeometryLine1D.hh"
-#include "pylith/feassemble/GeometryLine2D.hh"
-#include "pylith/feassemble/GeometryLine3D.hh"
-#include "pylith/feassemble/GeometryTri2D.hh"
-#include "pylith/feassemble/GeometryTri3D.hh"
-#include "pylith/feassemble/GeometryQuad2D.hh"
-#include "pylith/feassemble/GeometryQuad3D.hh"
-#include "pylith/feassemble/GeometryTet3D.hh"
-#include "pylith/feassemble/GeometryHex3D.hh"
-
-#include "pylith/feassemble/Quadrature.hh"
-#include "pylith/feassemble/Quadrature0D.hh"
-#include "pylith/feassemble/Quadrature1D.hh"
-#include "pylith/feassemble/Quadrature1Din2D.hh"
-#include "pylith/feassemble/Quadrature1Din3D.hh"
-#include "pylith/feassemble/Quadrature2D.hh"
-#include "pylith/feassemble/Quadrature2Din3D.hh"
-#include "pylith/feassemble/Quadrature3D.hh"
-
-#include "pylith/feassemble/Integrator.hh"
-#include "pylith/feassemble/IntegratorElasticity.hh"
-#include "pylith/feassemble/ElasticityExplicit.hh"
-#include "pylith/feassemble/ElasticityImplicit.hh"
-
-#include "pylith/feassemble/Constraint.hh"
-
-#include "pylith/utils/petscfwd.h"
-
-#include <assert.h>
-#include <stdexcept>
-#include <Python.h>
-#}header
-
-# ----------------------------------------------------------------------
-cdef extern from "Python.h":
-  object PyCObject_FromVoidPtr(void*, void (*destruct)(void*))
-  void* PyCObject_AsVoidPtr(object)
-
-cdef void* ptrFromHandle(obj):
-  """Extract pointer from PyCObject."""
-  return PyCObject_AsVoidPtr(obj.handle)
-
-cdef extern from "stdlib.h":
-    ctypedef unsigned long size_t
-    void* malloc(size_t size)
-    void free(void* mem)
-
-# ----------------------------------------------------------------------
-cdef void CellGeometry_destructor(void* obj):
-  """
-  Destroy CellGeometry object.
-  """
-  # create shim for destructor
-  #embed{ void CellGeometry_destructor_cpp(void* objVptr)
-  pylith::feassemble::CellGeometry* pQ =
-    (pylith::feassemble::CellGeometry*) objVptr;
-  delete pQ;
-  #}embed
-  CellGeometry_destructor_cpp(obj)
-  return
-
-cdef class CellGeometry:
-
-  cdef void* thisptr # Pointer to C++ object
-  cdef readonly object handle # PyCObject holding pointer to C++ object
-  cdef readonly object name # Identifier for object base type
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    self.handle = None
-    self.thisptr = NULL
-    self.name = "pylith_feassemble_CellGeometry"
-    return
-
-
-  def _createHandle(self):
-    """Wrap pointer to C++ object in PyCObject."""
-    return PyCObject_FromVoidPtr(self.thisptr, CellGeometry_destructor)
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryPoint1D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryPoint1D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryPoint1D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryPoint1D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryPoint2D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryPoint2D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryPoint2D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryPoint2D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryPoint3D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryPoint3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryPoint3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryPoint3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryLine1D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryLine1D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryLine1D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryLine1D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryLine2D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryLine2D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryLine2D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryLine2D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryLine3D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryLine3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryLine3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryLine3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryTri2D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryTri2D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryTri2D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryTri2D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryTri3D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryTri3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryTri3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryTri3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryQuad2D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryQuad2D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryQuad2D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryQuad2D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryQuad3D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryQuad3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryQuad3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryQuad3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryTet3D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryTet3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryTet3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryTet3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GeometryHex3D(CellGeometry):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* GeometryHex3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::GeometryHex3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    CellGeometry.__init__(self)
-    self.thisptr = GeometryHex3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef void Quadrature_destructor(void* obj):
-  """
-  Destroy Quadrature object.
-  """
-  # create shim for destructor
-  #embed{ void Quadrature_destructor_cpp(void* objVptr)
-  pylith::feassemble::Quadrature* pQ =
-    (pylith::feassemble::Quadrature*) objVptr;
-  delete pQ;
-  #}embed
-  Quadrature_destructor_cpp(obj)
-  return
-
-cdef class Quadrature:
-
-  cdef void* thisptr # Pointer to C++ object
-  cdef readonly object handle # PyCObject holding pointer to C++ object
-  cdef readonly object name # Identifier for object base type
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    self.handle = None
-    self.thisptr = NULL
-    self.name = "pylith_feassemble_Quadrature"
-    return
-
-
-  def initialize(self,
-                 basis, basisDeriv,
-                 quadPts, quadWts,
-                 cellDim, numBasis, numQuadPts, spaceDim):
-    """
-    Set basis functions and their derivatives, and coordinates and
-    weights of quadrature points.
-
-    @param basis Basis functions evaluated at the quadrature points
-    @param basisDeriv Basis function derivatives evaluated at quad pts
-    @param quadPts Coordinates of quadrature points in reference cell
-    @param quadWts Weights of quadrature points
-    @param cellDim Dimension of reference cell
-    @param numBasis Number of basis functions
-    @param numQuadPts Number of quadrature points
-    @param spaceDim Number of dimensions associated with cell vertices
-    """
-    # create shim for method 'initialize'
-    #embed{ void Quadrature_initialize(void* objVptr, double* basis, double* basisDeriv, double* quadPts, double* quadWts, int cellDim, int numBasis, int numQuadPts, int spaceDim)
-    try {
-      ((pylith::feassemble::Quadrature*) objVptr)->initialize(
-                                         basis, basisDeriv,
-                                         quadPts, quadWts,
-                                         cellDim, numBasis,
-                                         numQuadPts, spaceDim);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    import spatialdata.utils.simplearray
-
-    # basis
-    basis = spatialdata.utils.simplearray.objAsSimpleArray(basis)
-    if not basis.isCompatible(nd=2, simpletype="double",
-                              contiguous=True, notswapped=True):
-      raise TypeError, \
-            "Argument 'basis' must be a contiguous, 2-D array " \
-            "of type double."
-    if numQuadPts != basis.shape[0] or numBasis != basis.shape[1]:
-      raise TypeError, \
-            "Shape of argument 'basis' must be (numQuadPts, numBasis)."
-
-    # basisDeriv
-    basisDeriv = spatialdata.utils.simplearray.objAsSimpleArray(basisDeriv)
-    if not basisDeriv.isCompatible(nd=3, simpletype="double",
-                                   contiguous=True, notswapped=True):
-      raise TypeError, \
-            "Argument 'basisDeriv' must be a contiguous, 3-D array " \
-            "of type double."
-    if cellDim > 0:
-      if numQuadPts != basisDeriv.shape[0] or \
-             numBasis != basisDeriv.shape[1] or \
-             cellDim != basisDeriv.shape[2]:
-        raise TypeError, \
-              "Shape of argument 'basisDeriv' must be (numQuadPts, " \
-              "numBasis, cellDim)."
-    else:
-      if 1 != basisDeriv.shape[0] or \
-             1 != basisDeriv.shape[1] or \
-             1 != basisDeriv.shape[2]:
-        raise TypeError, \
-              "Shape of argument 'basisDeriv' must be (1, 1, 1) for 0-D cell."
-
-    # quadPts
-    quadPts = spatialdata.utils.simplearray.objAsSimpleArray(quadPts)
-    if not quadPts.isCompatible(nd=2, simpletype="double",
-                                contiguous=True, notswapped=True):
-      raise TypeError, \
-            "Argument 'quadPts' must be a contiguous, 2-D array " \
-            "of type double."
-    if cellDim > 0:
-      if numQuadPts != quadPts.shape[0] or cellDim != quadPts.shape[1]:
-        raise TypeError, \
-              "Shape of argument 'quadPts' must be (numQuadPts, cellDim)."
-    else:
-      if 1 != quadPts.shape[0] or 1 != quadPts.shape[1]:
-        raise TypeError, \
-              "Shape of argument 'quadPts' must be (1, 1) for 0-D cell."
-
-    # quadWts
-    quadWts = spatialdata.utils.simplearray.objAsSimpleArray(quadWts)
-    if not quadWts.isCompatible(nd=1, simpletype="double",
-                                contiguous=True, notswapped=True):
-      raise TypeError, \
-            "Argument 'quadWts' must be a contiguous, 1-D array " \
-            "of type double."
-    if numQuadPts != quadWts.shape[0]:
-      raise TypeError, \
-            "Shape of argument 'quadWts' must be (numQuadPts)."
-
-    cdef double* basisCpp
-    cdef double* basisDerivCpp
-    cdef double* quadPtsCpp
-    cdef double* quadWtsCpp
-    basisCpp = <double*> PyCObject_AsVoidPtr(basis.data)
-    basisDerivCpp = <double*> PyCObject_AsVoidPtr(basisDeriv.data)
-    quadPtsCpp = <double*> PyCObject_AsVoidPtr(quadPts.data)
-    quadWtsCpp = <double*> PyCObject_AsVoidPtr(quadWts.data)
-
-    Quadrature_initialize(self.thisptr,
-                          basisCpp, basisDerivCpp,
-                          quadPtsCpp, quadWtsCpp,
-                          cellDim, numBasis,
-                          numQuadPts, spaceDim)
-    return
-
-
-  def _createHandle(self):
-    """Wrap pointer to C++ object in PyCObject."""
-    return PyCObject_FromVoidPtr(self.thisptr, Quadrature_destructor)
-
-
-  property minJacobian:
-    def __set__(self, value):
-      """Set minimum allowable Jacobian."""
-      # create shim for method 'minJacobian'
-      #embed{ void Quadrature_minJacobian_set(void* objVptr, double value)
-      try {
-        assert(0 != objVptr);
-        ((pylith::feassemble::Quadrature*) objVptr)->minJacobian(value);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      Quadrature_minJacobian_set(self.thisptr, value)
-
-    def __get__(self):
-      """Get minimum allowable Jacobian."""
-      # create shim for method 'minJacobian'
-      #embed{ double Quadrature_minJacobian_get(void* objVptr)
-      double result = 0;
-      try {
-        assert(0 != objVptr);
-        result = ((pylith::feassemble::Quadrature*) objVptr)->minJacobian();
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      return result;
-      #}embed
-      return Quadrature_minJacobian_get(self.thisptr)
-
-
-  property checkConditioning:
-    def __set__(self, flag):
-      """Set minimum allowable Jacobian."""
-      # create shim for method 'checkConditioning'
-      #embed{ void Quadrature_checkConditioning_set(void* objVptr, int flag)
-      try {
-        assert(0 != objVptr);
-        ((pylith::feassemble::Quadrature*) objVptr)->checkConditioning(flag);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      Quadrature_checkConditioning_set(self.thisptr, flag)
-
-    def __get__(self):
-      """Get minimum allowable Jacobian."""
-      # create shim for method 'checkConditioning'
-      #embed{ int Quadrature_checkConditioning_get(void* objVptr)
-      int result = 0;
-      try {
-        assert(0 != objVptr);
-        result = ((pylith::feassemble::Quadrature*) objVptr)->checkConditioning();
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      return result;
-      #}embed
-      return Quadrature_checkConditioning_get(self.thisptr)
-
-
-  property refGeometry:
-    def __set__(self, value):
-      """
-      Set geometry associated with reference cell.
-      """
-      # create shim for method 'refGeometry'
-      #embed{ void Quadrature_refGeometry_set(void* objVptr, void* geomVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != geomVptr);
-        pylith::feassemble::CellGeometry* geom =
-          (pylith::feassemble::CellGeometry*) geomVptr;
-        ((pylith::feassemble::Quadrature*) objVptr)->refGeometry(geom);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "pylith_feassemble_CellGeometry":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'pylith::feassemble::CellGeometry'."
-      Quadrature_refGeometry_set(self.thisptr, ptrFromHandle(value))
-
-
-# ----------------------------------------------------------------------
-cdef class Quadrature0D(Quadrature):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* Quadrature0D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::Quadrature0D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    Quadrature.__init__(self)
-    self.thisptr = Quadrature0D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class Quadrature1D(Quadrature):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* Quadrature1D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::Quadrature1D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    Quadrature.__init__(self)
-    self.thisptr = Quadrature1D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class Quadrature1Din2D(Quadrature):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* Quadrature1Din2D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::Quadrature1Din2D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    Quadrature.__init__(self)
-    self.thisptr = Quadrature1Din2D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class Quadrature1Din3D(Quadrature):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* Quadrature1Din3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::Quadrature1Din3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    Quadrature.__init__(self)
-    self.thisptr = Quadrature1Din3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class Quadrature2D(Quadrature):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* Quadrature2D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::Quadrature2D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    Quadrature.__init__(self)
-    self.thisptr = Quadrature2D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class Quadrature2Din3D(Quadrature):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* Quadrature2Din3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::Quadrature2Din3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    Quadrature.__init__(self)
-    self.thisptr = Quadrature2Din3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class Quadrature3D(Quadrature):
-
-  def __init__(self):
-    """Constructor."""
-    # create shim for constructor
-    #embed{ void* Quadrature3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::Quadrature3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    Quadrature.__init__(self)
-    self.thisptr = Quadrature3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef void Integrator_destructor(void* obj):
-  """
-  Destroy Integrator object.
-  """
-  # create shim for destructor
-  #embed{ void Integrator_destructor_cpp(void* objVptr)
-  pylith::feassemble::Integrator* pQ =
-    (pylith::feassemble::Integrator*) objVptr;
-  delete pQ;
-  #}embed
-  Integrator_destructor_cpp(obj)
-  return
-
-
-cdef class Integrator:
-
-  cdef void* thisptr # Pointer to C++ object
-  cdef readonly object handle # PyCObject holding pointer to C++ object
-  cdef readonly object name # Identifier for object base type
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    self.handle = None
-    self.thisptr = NULL
-    self.name = "pylith_feassemble_integrator"
-    return
-
-
-  def integrateResidual(self, residual, t, fields, mesh, cs):
-    """
-    Integrate contributions to residual term (r) for operator.
-    """
-    # create shim for method 'integrateResidual'
-    #embed{ void Integrator_integrateResidual(void* objVptr, void* residualVptr, double t, void* fieldsVptr, void* meshVptr, void* csVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != residualVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      assert(0 != csVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ALE::Obj<pylith::real_section_type>* residual =
-        (ALE::Obj<pylith::real_section_type>*) residualVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      spatialdata::geocoords::CoordSys* cs =
-        (spatialdata::geocoords::CoordSys*) csVptr;
-      ((pylith::feassemble::Integrator*) objVptr)->integrateResidual(*residual,
-                                                            t, fields, *mesh,
-							    cs);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type 'Mesh'."
-    Integrator_integrateResidual(self.thisptr, 
-                                 PyCObject_AsVoidPtr(residual),
-                                 t,
-                                 ptrFromHandle(fields),
-                                 ptrFromHandle(mesh),
-				 ptrFromHandle(cs))
-    return
-
-
-  def integrateJacobian(self, mat, t, fields, mesh):
-    """
-    Compute contributions to Jacobian matrix (A) associated with operator.
-    """
-    # create shim for method 'integrateJacobian'
-    #embed{ void Integrator_integrateJacobian(void* objVptr, void* matVptr, double t, void* fieldsVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != matVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      PetscMat* mat = (PetscMat*) matVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      ((pylith::feassemble::Integrator*) objVptr)->integrateJacobian(
-                                                        mat, t, fields, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if fields.name != "pylith_topology_FieldsManager":
-      raise TypeError, \
-            "Argument 'fields' must be extension module type 'FieldsManager'."
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type 'Mesh'."
-    Integrator_integrateJacobian(self.thisptr,
-                                 PyCObject_AsVoidPtr(mat),
-                                 t,
-                                 ptrFromHandle(fields),
-                                 ptrFromHandle(mesh))
-    return
-
-
-  def integrateResidualAssembled(self, residual, t, fields, mesh, cs):
-    """
-    Integrate contributions to residual term (r) for operator that do
-    not require assembly over cells, vertices, or processors.
-    """
-    # create shim for method 'integrateResidualAssembled'
-    #embed{ void Integrator_integrateResidualAssembled(void* objVptr, void* residualVptr, double t, void* fieldsVptr, void* meshVptr, void* csVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != residualVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      assert(0 != csVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ALE::Obj<pylith::real_section_type>* residual =
-        (ALE::Obj<pylith::real_section_type>*) residualVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      spatialdata::geocoords::CoordSys* cs =
-        (spatialdata::geocoords::CoordSys*) csVptr;
-      ((pylith::feassemble::Integrator*) objVptr)->integrateResidualAssembled(*residual,
-                                                            t, fields, *mesh,
-							    cs);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type 'Mesh'."
-    Integrator_integrateResidualAssembled(self.thisptr, 
-                                          PyCObject_AsVoidPtr(residual),
-                                          t,
-                                          ptrFromHandle(fields),
-                                          ptrFromHandle(mesh),
-                                          ptrFromHandle(cs))
-    return
-
-
-  def integrateJacobianAssembled(self, mat, t, fields, mesh):
-    """
-    Compute contributions to Jacobian matrix (A) associated with
-    operator that do not require assembly over cells, vertices, or
-    processors.
-    """
-    # create shim for method 'integrateJacobianAssembled'
-    #embed{ void Integrator_integrateJacobianAssembled(void* objVptr, void* matVptr, double t, void* fieldsVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != matVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      PetscMat* mat = (PetscMat*) matVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      ((pylith::feassemble::Integrator*) objVptr)->integrateJacobianAssembled(
-                                                        mat, t, fields, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if fields.name != "pylith_topology_FieldsManager":
-      raise TypeError, \
-            "Argument 'fields' must be extension module type 'FieldsManager'."
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type 'Mesh'."
-    Integrator_integrateJacobianAssembled(self.thisptr,
-                                          PyCObject_AsVoidPtr(mat),
-                                          t,
-                                          ptrFromHandle(fields),
-                                          ptrFromHandle(mesh))
-    return
-
-
-  def updateState(self, t, fields, mesh):
-    """
-    Update state variables as needed.
-    """
-    # create shim for method 'updateState'
-    #embed{ void Integrator_updateState(void* objVptr, double t, void* fieldsVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldsVptr);
-      assert(0 != meshVptr);
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::feassemble::Integrator*) objVptr)->updateState(t, fields, *mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if fields.name != "pylith_topology_FieldsManager":
-      raise TypeError, \
-            "Argument 'fields' must be extension module type 'FieldsManager'."
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type 'Mesh'."
-    Integrator_updateState(self.thisptr,
-                           t,
-                           ptrFromHandle(fields),
-                           ptrFromHandle(mesh))
-    return
-
-
-  def verifyConfiguration(self, mesh):
-    """
-    Verify compatibility of configuration settings.
-    """
-    # create shim for method 'verifyConfiguration'
-    #embed{ void Integrator_verifyConfiguration(void* objVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::Mesh>* mesh =
-        (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::feassemble::Integrator*) objVptr)->verifyConfiguration(*mesh);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    #}embed
-    if mesh.name != "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type 'Mesh'."
-    Integrator_verifyConfiguration(self.thisptr,
-                                   ptrFromHandle(mesh))
-    return
-
-
-  def _createHandle(self):
-    """
-    Wrap pointer to C++ object in PyCObject.
-    """
-    return PyCObject_FromVoidPtr(self.thisptr, Integrator_destructor)
-
-
-  property quadrature:
-    def __set__(self, q):
-      """
-      Set quadrature.
-      """
-      # create shim for method 'quadrature'
-      #embed{ void Integrator_quadrature_set(void* objVptr, void* qVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != qVptr);
-        pylith::feassemble::Quadrature* quadrature =
-          (pylith::feassemble::Quadrature*) qVptr;
-        ((pylith::feassemble::Integrator*) objVptr)->quadrature(quadrature);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not q.name == "pylith_feassemble_Quadrature":
-        raise TypeError, \
-              "Argument must be extension module type 'Quadrature'."
-      Integrator_quadrature_set(self.thisptr, ptrFromHandle(q))
-
-
-  property normalizer:
-    def __set__(self, value):
-      """
-      Set nondimensionalizer.
-      """
-      # create shim for method 'normalizer'
-      #embed{ void Integrator_normalizer_set(void* objVptr, void* dimVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dimVptr);
-        spatialdata::units::Nondimensional* dim =
-          (spatialdata::units::Nondimensional*) dimVptr;
-        ((pylith::feassemble::Integrator*) objVptr)->normalizer(*dim);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_units_Nondimensional":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::units::Nondimensional'."
-      Integrator_normalizer_set(self.thisptr, ptrFromHandle(value))
-
-
-  property gravityField:
-    def __set__(self, g):
-      """
-      Set gravity field.
-      """
-      # create shim for method 'gravityField'
-      #embed{ void Integrator_gravityField_set(void* objVptr, void* gVptr)
-      try {
-        assert(0 != objVptr);
-        spatialdata::spatialdb::GravityField* gravityField =
-          (spatialdata::spatialdb::GravityField*) gVptr;
-        ((pylith::feassemble::Integrator*) objVptr)->gravityField(gravityField);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not g.name == "spatialdata_spatialdb_SpatialDB":
-        raise TypeError, \
-              "Argument must be extension module type 'SpatialDB'."
-      if None == g:
-        Integrator_gravityField_set(self.thisptr, NULL)
-      else:
-        Integrator_gravityField_set(self.thisptr, ptrFromHandle(g))
-
-
-  property timeStep:
-    def __set__(self, dt):
-      """
-      Set timeStep.
-      """
-      # create shim for method 'timeStep'
-      #embed{ void Integrator_timeStep_set(void* objVptr, double dt)
-      try {
-        assert(0 != objVptr);
-        ((pylith::feassemble::Integrator*) objVptr)->timeStep(dt);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      Integrator_timeStep_set(self.thisptr, dt)
-
-
-  property stableTimeStep:
-    def __get__(self):
-      """
-      Get stable time step.
-      """
-      # create shim for method 'stableTimeStep'
-      #embed{ double Integrator_stableTimeStep_get(void* objVptr)
-      double result = 0.0;
-      try {
-        assert(0 != objVptr);
-        result =
-          ((pylith::feassemble::Integrator*) objVptr)->stableTimeStep();
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      return result;
-      #}embed
-      return Integrator_stableTimeStep_get(self.thisptr)
-
-
-  property needNewJacobian:
-    def __get__(self):
-      """
-      Set timeStep.
-      """
-      # create shim for method 'needNewJacobian'
-      #embed{ int Integrator_needNewJacobian_get(void* objVptr)
-      int result = 0;
-      try {
-        assert(0 != objVptr);
-        result =
-          ((pylith::feassemble::Integrator*) objVptr)->needNewJacobian();
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      return result;
-      #}embed
-      return Integrator_needNewJacobian_get(self.thisptr)
-
-
-  property useSolnIncr:
-    def __set__(self, flag):
-      """
-      Set solution increment flag.
-      """
-      # create shim for method 'useSolnIncr'
-      #embed{ void Integrator_useSolnIncr_set(void* objVptr, int flag)
-      try {
-        assert(0 != objVptr);
-        ((pylith::feassemble::Integrator*) objVptr)->useSolnIncr(flag);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      Integrator_useSolnIncr_set(self.thisptr, flag)
-
-
-# ----------------------------------------------------------------------
-cdef class IntegratorElasticity(Integrator):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    Integrator.__init__(self)
-    return
-
-
-  def cellField(self, name, mesh, fields=None):
-    """
-    Get cell field.
-    """
-    # create shim for method 'cellField'
-    #embed{ void* IntegratorElasticity_cellField(void* objVptr, int* fieldPtr, char* name, void* meshVptr, void* fieldsVptr)
-    void* result = 0;
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldPtr);
-      assert(0 != name);
-      assert(0 != meshVptr);
-      pylith::feassemble::IntegratorElasticity* integrator = (pylith::feassemble::IntegratorElasticity*) objVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      pylith::topology::FieldsManager* fields =
-        (pylith::topology::FieldsManager*) fieldsVptr;
-      pylith::VectorFieldEnum fieldType;
-      const ALE::Obj<pylith::real_section_type>& field =
-        integrator->cellField(&fieldType, name, *mesh, fields);
-      *fieldPtr = fieldType;
-      result = (void*) &field;
-      } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type " \
-            "'pylith::topology::Mesh'."
-    if None != fields:
-      if not fields.name == "pylith_topology_FieldsManager":
-        raise TypeError, \
-              "Argument 'fields' must be extension module type " \
-              "'pylith::topology::FieldsManager'."
-    cdef void* ptr
-    cdef int fieldType
-    fieldType = 3
-    if None != fields:
-      ptr = IntegratorElasticity_cellField(self.thisptr, &fieldType, name,
-                                           ptrFromHandle(mesh),
-                                           ptrFromHandle(fields))
-    else:
-      ptr = IntegratorElasticity_cellField(self.thisptr, &fieldType, name,
-                                           ptrFromHandle(mesh), NULL)
-    return (PyCObject_FromVoidPtr(ptr, NULL), fieldType)
-
-
-  property material:
-    def __set__(self, m):
-      """
-      Set material.
-      """
-      # create shim for method 'material'
-      #embed{ void IntegratorElasticity_material_set(void* objVptr, void* mVptr)
-      try {
-        assert(0 != objVptr);
-        pylith::materials::ElasticMaterial* material =
-          (pylith::materials::ElasticMaterial*) mVptr;
-        ((pylith::feassemble::IntegratorElasticity*) objVptr)->material(material);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not m.name == "pylith_materials_ElasticMaterial":
-        raise TypeError, \
-              "Argument must be extension module type 'ElasticMaterial'."
-      IntegratorElasticity_material_set(self.thisptr, ptrFromHandle(m))
-
-
-# ----------------------------------------------------------------------
-cdef class ElasticityExplicit(IntegratorElasticity):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* ElasticityExplicit_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::ElasticityExplicit);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    Integrator.__init__(self)
-    self.thisptr = ElasticityExplicit_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class ElasticityImplicit(IntegratorElasticity):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* ElasticityImplicit_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::feassemble::ElasticityImplicit);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    Integrator.__init__(self)
-    self.thisptr = ElasticityImplicit_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef void Constraint_destructor(void* obj):
-  """
-  Destroy Constraint object.
-  """
-  # create shim for destructor
-  #embed{ void Constraint_destructor_cpp(void* objVptr)
-  pylith::feassemble::Constraint* pQ =
-    (pylith::feassemble::Constraint*) objVptr;
-  delete pQ;
-  #}embed
-  Constraint_destructor_cpp(obj)
-  return
-
-
-cdef class Constraint:
-
-  cdef void* thisptr # Pointer to C++ object
-  cdef readonly object handle # PyCObject holding pointer to C++ object
-  cdef readonly object name # Identifier for object base type
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    self.handle = None
-    self.thisptr = NULL
-    self.name = "pylith_feassemble_constraint"
-    return
-
-
-  def setConstraintSizes(self, field, mesh):
-    """
-    Set number of degrees of freedom that are constrained at points in field.
-    """
-    # create shim for method 'setConstraintSizes'
-    #embed{ void Constraint_setConstraintSizes(void* objVptr, void* fieldVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::real_section_type>* field = (ALE::Obj<pylith::real_section_type>*) fieldVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::feassemble::Constraint*) objVptr)->setConstraintSizes(*field, *mesh);
-      } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type " \
-            "'pylith::topology::Mesh'."
-    Constraint_setConstraintSizes(self.thisptr, PyCObject_AsVoidPtr(field),
-                                  ptrFromHandle(mesh))
-    return
-
-
-  def setConstraints(self, field, mesh):
-    """
-    Set which degrees of freedom that are constrained at points in field.
-    """
-    # create shim for method 'setConstraints'
-    #embed{ void Constraint_setConstraints(void* objVptr, void* fieldVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::real_section_type>* field = (ALE::Obj<pylith::real_section_type>*) fieldVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::feassemble::Constraint*) objVptr)->setConstraints(*field, *mesh);
-      } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type " \
-            "'pylith::topology::Mesh'."
-    Constraint_setConstraints(self.thisptr, PyCObject_AsVoidPtr(field), ptrFromHandle(mesh))
-    return
-
-
-  def setField(self, t, field, mesh):
-    """
-    Set values in field.
-    """
-    # create shim for method 'setField'
-    #embed{ void Constraint_setField(void* objVptr, double t, void* fieldVptr, void* meshVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != fieldVptr);
-      assert(0 != meshVptr);
-      ALE::Obj<pylith::real_section_type>* field = (ALE::Obj<pylith::real_section_type>*) fieldVptr;
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      ((pylith::feassemble::Constraint*) objVptr)->setField(t, *field, *mesh);
-      } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument 'mesh' must be extension module type " \
-            "'pylith::topology::Mesh'."
-    Constraint_setField(self.thisptr, t, PyCObject_AsVoidPtr(field),
-                        ptrFromHandle(mesh))
-    return
-
-
-  property normalizer:
-    def __set__(self, value):
-      """
-      Set nondimensionalizer.
-      """
-      # create shim for method 'normalizer'
-      #embed{ void Constraint_normalizer_set(void* objVptr, void* dimVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dimVptr);
-        spatialdata::units::Nondimensional* dim =
-          (spatialdata::units::Nondimensional*) dimVptr;
-        ((pylith::feassemble::Constraint*) objVptr)->normalizer(*dim);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_units_Nondimensional":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::units::Nondimensional'."
-      Constraint_normalizer_set(self.thisptr, ptrFromHandle(value))
-
-
-  property useSolnIncr:
-    def __set__(self, flag):
-      """
-      Set use solution increment flag.
-      """
-      # create shim for method 'useSolnIncr'
-      #embed{ void Constraint_useSolnIncr_set(void* objVptr, int flag)
-      try {
-        assert(0 != objVptr);
-        ((pylith::feassemble::Constraint*) objVptr)->useSolnIncr(flag);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      Constraint_useSolnIncr_set(self.thisptr, flag)
-
-
-  def _createHandle(self):
-    """
-    Wrap pointer to C++ object in PyCObject.
-    """
-    return PyCObject_FromVoidPtr(self.thisptr, Constraint_destructor)
-
-
-# End of file 

Deleted: short/3D/PyLith/branches/pylith-swig/modulesrc/materials/materials.pyxe.src
===================================================================
--- short/3D/PyLith/branches/pylith-swig/modulesrc/materials/materials.pyxe.src	2009-03-16 23:17:30 UTC (rev 14356)
+++ short/3D/PyLith/branches/pylith-swig/modulesrc/materials/materials.pyxe.src	2009-03-16 23:22:25 UTC (rev 14357)
@@ -1,581 +0,0 @@
-# -*- Pyrex -*-
-#
-# ======================================================================
-#
-#                           Brad T. Aagaard
-#                        U.S. Geological Survey
-#
-# {LicenseText}
-#
-# ======================================================================
-#
-
-#header{
-#include "pylith/materials/Material.hh"
-#include "pylith/materials/ElasticMaterial.hh"
-#include "pylith/materials/ElasticStrain1D.hh"
-#include "pylith/materials/ElasticStress1D.hh"
-#include "pylith/materials/ElasticIsotropic3D.hh"
-#include "pylith/materials/ElasticPlaneStrain.hh"
-#include "pylith/materials/ElasticPlaneStress.hh"
-#include "pylith/materials/MaxwellIsotropic3D.hh"
-#include "pylith/materials/GenMaxwellIsotropic3D.hh"
-
-#include <assert.h>
-#include <stdexcept>
-#include <Python.h>
-#}header
-
-# ----------------------------------------------------------------------
-cdef extern from "Python.h":
-  object PyCObject_FromVoidPtr(void*, void (*destruct)(void*))
-  void* PyCObject_AsVoidPtr(object)
-
-cdef void* ptrFromHandle(obj):
-  """Extract pointer from PyCObject."""
-  return PyCObject_AsVoidPtr(obj.handle)
-
-cdef extern from "stdlib.h":
-  ctypedef unsigned long size_t
-  void* malloc(size_t size)
-  void free(void* mem)
-
-cdef void Material_destructor(void* obj):
-  """
-  Destroy Material object.
-  """
-  # create shim for destructor
-  #embed{ void Material_destructor_cpp(void* pObj)
-  pylith::materials::Material* pM =
-    (pylith::materials::Material*) pObj;
-  delete pM;
-  #}embed
-  Material_destructor_cpp(obj)
-  return
-
-
-# ----------------------------------------------------------------------
-cdef class Material:
-
-  cdef void* thisptr # Pointer to C++ object
-  cdef readonly object handle # PyCObject holding pointer to C++ object
-  cdef readonly object name # Identifier for object base type
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    self.handle = None
-    self.thisptr = NULL
-    self.name = "pylith_materials_Material"
-    return
-
-
-  def initialize(self, mesh, cs, quadrature):
-    """
-    Initialize material by getting physical property parameters from
-    database.
-    """
-    # create shim for method 'initialize'
-    #embed{ void Material_initialize(void* objVptr, void* meshVptr, void* csVptr, void* qVptr)
-    try {
-      assert(0 != objVptr);
-      assert(0 != meshVptr);
-      assert(0 != csVptr);
-      assert(0 != qVptr);
-      ALE::Obj<pylith::Mesh>* mesh = (ALE::Obj<pylith::Mesh>*) meshVptr;
-      spatialdata::geocoords::CoordSys* cs =
-        (spatialdata::geocoords::CoordSys*) csVptr;
-      pylith::feassemble::Quadrature* quadrature =
-        (pylith::feassemble::Quadrature*) qVptr;
-      ((pylith::materials::Material*) objVptr)->initialize(*mesh, cs, quadrature);
-      } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch      
-    #}embed
-
-    if not mesh.name == "pylith_topology_Mesh":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'pylith::topology::Mesh'."
-    if not cs.name == "spatialdata_geocoords_CoordSys":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'spatialdata::geocoords::CoordSys'."
-    if not quadrature.name == "pylith_feassemble_Quadrature":
-      raise TypeError, \
-            "Argument must be extension module type " \
-            "'pylith::feassemble::Quadrature'."
-    Material_initialize(self.thisptr, ptrFromHandle(mesh), ptrFromHandle(cs),
-                        ptrFromHandle(quadrature))
-    return
-
-
-  def _createHandle(self):
-    """
-    Wrap pointer to C++ object in PyCObject.
-    """
-    return PyCObject_FromVoidPtr(self.thisptr, Material_destructor)
-
-
-  property db:
-    def __set__(self, value):
-      """
-      Set database for physical property parameters.
-      """
-      # create shim for method 'db'
-      #embed{ void Material_db_set(void* objVptr, void* dbVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dbVptr);
-        spatialdata::spatialdb::SpatialDB* db =
-          (spatialdata::spatialdb::SpatialDB*) dbVptr;
-        ((pylith::materials::Material*) objVptr)->db(db);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_spatialdb_SpatialDB":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::spatialdb::SpatialDB'."
-      Material_db_set(self.thisptr, ptrFromHandle(value))
-
-
-  property initialStateDB:
-    def __set__(self, value):
-      """
-      Set database for initial state variables.
-      """
-      # create shim for method 'initialStateDB'
-      #embed{ void Material_initialStateDB_set(void* objVptr, void* isVptr)
-      try {
-        assert(0 != objVptr);
-        spatialdata::spatialdb::SpatialDB* initialStateDB =
-          (spatialdata::spatialdb::SpatialDB*) isVptr;
-        ((pylith::materials::Material*) objVptr)->initialStateDB(initialStateDB);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_spatialdb_SpatialDB":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::spatialdb::SpatialDB'."
-      if None == value:
-        Material_initialStateDB_set(self.thisptr, NULL)
-      else:
-        Material_initialStateDB_set(self.thisptr, ptrFromHandle(value))
-
-
-
-  property id:
-    def __set__(self, value):
-      """
-      Set identifier of material.
-      """
-      # create shim for method 'id'
-      #embed{ void Material_id_set(void* objVptr, int value)
-      try {
-        assert(0 != objVptr);
-        ((pylith::materials::Material*) objVptr)->id(value);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      Material_id_set(self.thisptr, value)
-
-    def __get__(self):
-      """
-      Get identifier of material.
-      """
-      # create shim for method 'id'
-      #embed{ int Material_id_get(void* objVptr)
-      int result = 0;
-      try {
-        assert(0 != objVptr);
-        result = ((pylith::materials::Material*) objVptr)->id();
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      return result;
-      #}embed
-      return Material_id_get(self.thisptr)
-
-
-  property label:
-    def __set__(self, value):
-      """
-      Set label of material.
-      """
-      # create shim for method 'label'
-      #embed{ void Material_label_set(void* objVptr, char* value)
-      try {
-        assert(0 != objVptr);
-        ((pylith::materials::Material*) objVptr)->label(value);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      Material_label_set(self.thisptr, value)
-
-
-  property dimension:
-    def __get__(self):
-      """
-      Get dimension associated with material.
-      """
-      # create shim for method 'dimension'
-      #embed{ int Material_dimension_get(void* objVptr)
-      int result = 0;
-      try {
-        assert(0 != objVptr);
-        result = ((pylith::materials::Material*) objVptr)->dimension();
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      return result;
-      #}embed
-      return Material_dimension_get(self.thisptr)
-
-
-  property normalizer:
-    def __set__(self, value):
-      """
-      Set scales for nondimensionalizing physical properties.
-      """
-      # create shim for method 'normalizer'
-      #embed{ void Material_normalizer_set(void* objVptr, void* dimVptr)
-      try {
-        assert(0 != objVptr);
-        assert(0 != dimVptr);
-        spatialdata::units::Nondimensional* dim =
-          (spatialdata::units::Nondimensional*) dimVptr;
-        ((pylith::materials::Material*) objVptr)->normalizer(*dim);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      if not value.name == "spatialdata_units_Nondimensional":
-        raise TypeError, \
-              "Argument must be extension module type " \
-              "'spatialdata::units::Nondimensional'."
-      Material_normalizer_set(self.thisptr, ptrFromHandle(value))
-
-
-# ----------------------------------------------------------------------
-cdef class ElasticMaterial(Material):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    Material.__init__(self)
-    self.name = "pylith_materials_ElasticMaterial"
-    return
-
-
-  property useElasticBehavior:
-    def __set__(self, value):
-      """
-      Set useElasticBehavior flag.
-      """
-      # create shim for method 'useElasticBehavior'
-      #embed{ void Material_useElasticBehavior_set(void* objVptr, int value)
-      try {
-        assert(0 != objVptr);
-        ((pylith::materials::ElasticMaterial*) objVptr)->useElasticBehavior(value);
-      } catch (const std::exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.what()));
-      } catch (const ALE::Exception& err) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        const_cast<char*>(err.msg().c_str()));
-      } catch (...) {
-        PyErr_SetString(PyExc_RuntimeError,
-                        "Caught unknown C++ exception.");
-      } // try/catch
-      #}embed
-      Material_useElasticBehavior_set(self.thisptr, value)
-
-
-# ----------------------------------------------------------------------
-cdef class ElasticStrain1D(ElasticMaterial):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* ElasticStrain1D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::materials::ElasticStrain1D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    ElasticMaterial.__init__(self)
-    self.thisptr = ElasticStrain1D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class ElasticStress1D(ElasticMaterial):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* ElasticStress1D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::materials::ElasticStress1D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    ElasticMaterial.__init__(self)
-    self.thisptr = ElasticStress1D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class ElasticPlaneStrain(ElasticMaterial):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* ElasticPlaneStrain_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::materials::ElasticPlaneStrain);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    ElasticMaterial.__init__(self)
-    self.thisptr = ElasticPlaneStrain_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class ElasticPlaneStress(ElasticMaterial):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* ElasticPlaneStress_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::materials::ElasticPlaneStress);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    ElasticMaterial.__init__(self)
-    self.thisptr = ElasticPlaneStress_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class ElasticIsotropic3D(ElasticMaterial):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* ElasticIsotropic3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::materials::ElasticIsotropic3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    ElasticMaterial.__init__(self)
-    self.thisptr = ElasticIsotropic3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class GenMaxwellIsotropic3D(ElasticMaterial):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* GenMaxwellIsotropic3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::materials::GenMaxwellIsotropic3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    ElasticMaterial.__init__(self)
-    self.thisptr = GenMaxwellIsotropic3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-
-# ----------------------------------------------------------------------
-cdef class MaxwellIsotropic3D(ElasticMaterial):
-
-  def __init__(self):
-    """
-    Constructor.
-    """
-    # create shim for constructor
-    #embed{ void* MaxwellIsotropic3D_constructor()
-    void* result = 0;
-    try {
-      result = (void*)(new pylith::materials::MaxwellIsotropic3D);
-      assert(0 != result);
-    } catch (const std::exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.what()));
-    } catch (const ALE::Exception& err) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      const_cast<char*>(err.msg().c_str()));
-    } catch (...) {
-      PyErr_SetString(PyExc_RuntimeError,
-                      "Caught unknown C++ exception.");
-    } // try/catch
-    return result;
-    #}embed
-
-    ElasticMaterial.__init__(self)
-    self.thisptr = MaxwellIsotropic3D_constructor()
-    self.handle = self._createHandle()
-    return
-
-# End of file 



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