[cig-commits] r14980 - in short/3D/PyLith/trunk/doc/presentations/pylith1.3: . figs movies
brad at geodynamics.org
brad at geodynamics.org
Mon May 11 17:27:56 PDT 2009
Author: brad
Date: 2009-05-11 17:27:56 -0700 (Mon, 11 May 2009)
New Revision: 14980
Added:
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/example-buck.pdf.BAK
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/example-currenti.pdf.BAK
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/example-freed.pdf.BAK
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/example-hsu-one.pdf.BAK
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/example-hsu-two.pdf.BAK
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/example-hsu.pdf.BAK
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/packages.svg
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/savageprescott_profile2.pdf.BAK
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/savageprescott_profile9.pdf.BAK
short/3D/PyLith/trunk/doc/presentations/pylith1.3/movies/
short/3D/PyLith/trunk/doc/presentations/pylith1.3/movies/savageprescott_domain.jpg
short/3D/PyLith/trunk/doc/presentations/pylith1.3/movies/savageprescott_groundsurf.jpg
short/3D/PyLith/trunk/doc/presentations/pylith1.3/pylith_overview.pdf
Removed:
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/benchmark_error_hex8_0500m.png
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/benchmark_error_tet4_0500m.png
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/benchmark_soln.png
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/benchmark_summary.png
short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/binbotshipping.png
Modified:
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short/3D/PyLith/trunk/doc/presentations/pylith1.3/makefile_pdf
short/3D/PyLith/trunk/doc/presentations/pylith1.3/pylith_overview.tex
Log:
Reorganized slides and added several figures.
Deleted: short/3D/PyLith/trunk/doc/presentations/pylith1.3/figs/benchmark_error_hex8_0500m.png
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Modified: short/3D/PyLith/trunk/doc/presentations/pylith1.3/makefile_pdf
===================================================================
--- short/3D/PyLith/trunk/doc/presentations/pylith1.3/makefile_pdf 2009-05-11 18:09:37 UTC (rev 14979)
+++ short/3D/PyLith/trunk/doc/presentations/pylith1.3/makefile_pdf 2009-05-12 00:27:56 UTC (rev 14980)
@@ -49,6 +49,7 @@
pdffigs:
for i in `find figs -name "*.eps"`; do ~/bin/epstopdf $$i; done
+ for i in `find figs -name "*.pdf.BAK"`; do j=`echo $$i | sed -e s/.BAK//g`; cp -f $$i $$j; done
compressfigs:
gzip `find figs -name "*.eps"`
Added: short/3D/PyLith/trunk/doc/presentations/pylith1.3/movies/savageprescott_domain.jpg
===================================================================
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Name: svn:mime-type
+ application/octet-stream
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===================================================================
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Property changes on: short/3D/PyLith/trunk/doc/presentations/pylith1.3/movies/savageprescott_groundsurf.jpg
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
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===================================================================
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Property changes on: short/3D/PyLith/trunk/doc/presentations/pylith1.3/pylith_overview.pdf
___________________________________________________________________
Name: svn:mime-type
+ application/pdf
Modified: short/3D/PyLith/trunk/doc/presentations/pylith1.3/pylith_overview.tex
===================================================================
--- short/3D/PyLith/trunk/doc/presentations/pylith1.3/pylith_overview.tex 2009-05-11 18:09:37 UTC (rev 14979)
+++ short/3D/PyLith/trunk/doc/presentations/pylith1.3/pylith_overview.tex 2009-05-12 00:27:56 UTC (rev 14980)
@@ -21,49 +21,6 @@
\vfill
% ------------------------------------------------------------ SLIDE
-\foilhead{Outline}
- \summary{}
-
- \begin{itemize}
- \item Introduction to PyLith
- \begin{itemize}
- \item Motivation \& development objective
- \item What does PyLith do?
- \end{itemize}
- \item PyLith Design
- \begin{itemize}
- \item Architecture and programming languages
- \item Development strategy
- \end{itemize}
- \item Features
- \begin{itemize}
- \item Current release
- \item Planned releases
- \end{itemize}
- \item Benchmark results
- \end{itemize}
-
-\bgadd{\vspace*{7.9in}%
- \begin{center}%
- \includegraphics[height=14mm]{../logos/cig}
- \end{center}}
-
-% ------------------------------------------------------------ SLIDE
-\foilhead{Motivation for Developing PyLith}
- \summary{}
-
- \begin{itemize}
- \item Available modeling codes
- \begin{itemize}
- \item rarely solve the problem {\bf you} want to solve
- \item are often poorly documented
- \item may not work correctly
- \end{itemize}
- \item Current research demands larger, more complex simulations
- \item Want to avoid multiple, incompatible versions of the same code
- \end{itemize}
-
-% ------------------------------------------------------------ SLIDE
\foilhead{PyLith}
\summary{What is it good for?}
@@ -82,7 +39,80 @@
\end{itemize}
\end{itemize}
+\bgadd{\vspace*{7.9in}%
+ \begin{center}%
+ \includegraphics[height=14mm]{../logos/cig}
+ \end{center}}
+
% ------------------------------------------------------------ SLIDE
+\foilhead{Example Application 1}
+ \summary{Freed (Purdue), Ali (Purdue), and Freymueller (U. of AK, Fairbanks}
+
+ \vfill
+ \begin{center}
+ Contemporary strain and stressing rates across Alaska from interseismic and
+ postseismic processes \\
+ \includegraphics[scale=1.8]{figs/example-freed}
+ \end{center}
+
+% ------------------------------------------------------------ SLIDE
+\foilhead{Example Application 2}
+ \summary{Hsu (IESAS), Simons (Caltech), Williams (GNS Science), Casarotti (INGV)}
+
+ \vfill
+
+ \begin{center}
+ 3-D FEM derived elastic Green's functions for the coseismic deformation of the
+ 2005 Mw 8.7 Nias-Simeulue, Sumatra earthquake \\
+ \includegraphics[scale=1.0]{figs/example-hsu-one}\hspace{0.5in}
+ \includegraphics[scale=1.0]{figs/example-hsu-two}
+ \end{center}
+
+% ------------------------------------------------------------ SLIDE
+\foilhead{Example Application 3}
+ \summary{Williams (GNS Science), Gable (LANL), Hager (MIT), Meade (Harvard) Aagaard (USGS), Knepley (ANL)}
+
+ \vfill
+
+\begin{center}
+ Modeling of Multiple Earthquake Cycles in Southern California Using the SCEC
+ Community Fault Model \\
+ \includegraphics[scale=0.45]{figs/example-williams}
+ \end{center}
+
+% ------------------------------------------------------------ SLIDE
+\foilhead{Example Application 4}
+ \summary{Currenti (INGV), Del Negro (INGV), Ganci (INGV), Williams
+ (GNS Science)}
+
+ \vfill
+
+ \begin{center}
+ Modeling of Coulomb stress changes during the 2002-2003 Etna eruption \\
+ \includegraphics[scale=1.1]{figs/example-currenti}
+ \end{center}
+
+% ------------------------------------------------------------ SLIDE
+\foilhead{Example Application 5}
+ \summary{Buck (Columbia) and Nooner (Columbia)}
+
+ \vfill
+
+ \begin{center}
+ Post-rifting relaxation at a subaerial spreading center \\
+ \includegraphics[scale=1.5]{figs/example-buck}
+ \end{center}
+
+% ------------------------------------------------------------ SLIDE
+\foilhead{Crustal Deformation Modeling}
+ \summary{Overview of workflow for typical research problem}
+
+ \vfill
+ \begin{center}
+ \includegraphics[scale=0.9]{figs/workflow}
+ \end{center}
+
+% ------------------------------------------------------------ SLIDE
\foilhead{Features in PyLith 1.3}
\summary{}
@@ -131,6 +161,46 @@
\end{itemize}
% ------------------------------------------------------------ SLIDE
+\foilhead{PyLith 1.x: Planned Releases}
+ \summary{Current productivity is about 2 feature releases per year}
+
+ \begin{itemize}
+ \item PyLith 1.4: June 2009
+ \begin{itemize}
+ \item Power-law viscoelastic rheology and PETSc nonlinear solvers
+ \item Ability to specify initial stress, strain, and state variables
+ \item Automatic, transparent nondimensionalization
+ \item Use SWIG for Python/C++ interface
+ \end{itemize}
+ \item PyLith 1.5: anticipate release in Fall 2009
+ \begin{itemize}
+ \item Fault constitutive behavior with several widely used friction models
+ \end{itemize}
+ \item PyLith 1.6: anticipate release in Spring/Summer 2010
+ \begin{itemize}
+ \item Time dependent boundary conditions
+ \item Large deformations and finite strain
+ \end{itemize}
+ \item PyLith 1.7: Automation of 4-D Green's functions
+ \item PyLith 1.8: Coupling of quasi-static and dynamic simulations
+ \end{itemize}
+
+% ------------------------------------------------------------ SLIDE
+\foilhead{Motivation for Developing PyLith}
+ \summary{}
+
+ \begin{itemize}
+ \item Available modeling codes
+ \begin{itemize}
+ \item rarely solve the problem {\bf you} want to solve
+ \item are often poorly documented
+ \item may not work correctly
+ \end{itemize}
+ \item Current research demands larger, more complex simulations
+ \item Want to avoid multiple, incompatible versions of the same code
+ \end{itemize}
+
+% ------------------------------------------------------------ SLIDE
\foilhead{PyLith Design Objective}
\summary{Want a code developed for and by the community}
@@ -151,13 +221,29 @@
\end{itemize}
% ------------------------------------------------------------ SLIDE
-\foilhead{Crustal Deformation Modeling}
- \summary{Overview of workflow for typical research problem}
+\foilhead{PyLith is a Community Code}
+ \summary{Success of code depends on community participation}
- \vfill
- \begin{center}
- \includegraphics[scale=0.9]{figs/workflow}
- \end{center}
+ \begin{itemize}
+ \item End-users (anyone who uses the code)
+ \begin{itemize}
+ \item Help define and prioritize features that should be added
+ \item Report bugs/problems and suggest improvements
+ \end{itemize}
+ \item Expert users
+ \begin{itemize}
+ \item Help test alpha versions of releases
+ \item Run benchmarks and report results
+ \item Contribute meshing and visualization examples to documentation
+ \item Add features following template (e.g., constitutive models)
+ \end{itemize}
+ \item Developer
+ \begin{itemize}
+ \item Define development strategy
+ \item Implement new features and tests
+ \item Write documentation
+ \end{itemize}
+ \end{itemize}
% ------------------------------------------------------------ SLIDE
\foilhead{PyLith Design: Focus on Geodynamics}
@@ -165,7 +251,7 @@
\vfill
\begin{center}
- \includegraphics[scale=1.23]{figs/packages}
+ \includegraphics[scale=0.9]{figs/packages}
\end{center}
% ------------------------------------------------------------ SLIDE
@@ -175,7 +261,7 @@
\begin{itemize}
\item Top-level code written in Python
\begin{itemize}
- \item Expressive, high-level,, object-oriented language
+ \item Expressive, high-level, object-oriented language
\item Dynamic typing allows adding additional modules at runtime
\item Convenient scripting
\end{itemize}
@@ -227,31 +313,6 @@
\end{center}
% ------------------------------------------------------------ SLIDE
-\foilhead{PyLith 1.x: Planned Releases}
- \summary{First add features present in Tecton and EqSim}
-
- \begin{itemize}
- \item PyLith 1.4: June 2009
- \begin{itemize}
- \item Power-law viscoelastic rheology and PETSc nonlinear solvers
- \item Ability to specify initial stress, strain, and state variables
- \item Automatic, transparent nondimensionalization
- \item Use SWIG for Python/C++ interface
- \end{itemize}
- \item PyLith 1.5: anticipate release in Fall 2009
- \begin{itemize}
- \item Fault constitutive behavior with several widely used friction models
- \end{itemize}
- \item PyLith 1.6: anticipate release in Spring/Summer 2010
- \begin{itemize}
- \item Time dependent boundary conditions
- \item Large deformations and finite strain
- \end{itemize}
- \item PyLith 1.7: Automation of 4-D Green's functions
- \item PyLith 1.8: Coupling of quasi-static and dynamic simulations
- \end{itemize}
-
-% ------------------------------------------------------------ SLIDE
\foilhead{Implementation: Finite-Element Data Structures}
\summary{Use Sieve for storage and manipulating mesh information}
@@ -338,49 +399,33 @@
\end{itemize}
\item Disadvantages
\begin{itemize}
- \item Conditioned matrix is non-symmetric (eliminated through
- nondimensionalization)
+ \item Conditioned matrix is non-symmetric
\item Mixes displacements and forces in solution
\end{itemize}
\end{itemize}
% ------------------------------------------------------------ SLIDE
\foilhead{Benchmarking PyLith}
- \summary{Elastic solution for strike-slip benchmark}
+ \summary{Savage and Prescott (1978): Repeated Strike-slip ruptures}
- \vfill
- \begin{center}
- \includegraphics[scale=0.6]{figs/benchmark_soln}
- \end{center}
-
+ \movie{0.58in}{0.0in}{7.84in}{5.84in}{movies/savageprescott_domain}
+
% ------------------------------------------------------------ SLIDE
-\foilhead{Tet4 500m Mesh: Local Error}
- \summary{Error largest around edges of fault}
+\foilhead{Benchmarking PyLith}
+ \summary{Savage and Prescott (1978): Repeated Strike-slip ruptures}
- \vfill
- \begin{center}
- \includegraphics[scale=0.6]{figs/benchmark_error_tet4_0500m}
- \end{center}
-
+ \movie{0.58in}{0.0in}{7.84in}{5.84in}{movies/savageprescott_groundsurf}
+
% ------------------------------------------------------------ SLIDE
-\foilhead{Hex8 500m Mesh: Local Error}
- \summary{Error concentrated around change in slip gradient}
+\foilhead{Benchmarking PyLith}
+ \summary{Simulation closely matches analytical solution during 10th eq cycle}
\vfill
\begin{center}
- \includegraphics[scale=0.6]{figs/benchmark_error_hex8_0500m}
+ \includegraphics[scale=1.2]{figs/savageprescott_profile9}
\end{center}
% ------------------------------------------------------------ SLIDE
-\foilhead{Strike-Slip Benchmark: Performance Summary}
- \summary{Hex8 cells outperform tet4 cells}
-
- \vfill
- \begin{center}
- \includegraphics[scale=0.5]{figs/benchmark_summary}
- \end{center}
-
-% ------------------------------------------------------------ SLIDE
\foilhead{Running PyLith}
\summary{Ingredients}
@@ -392,9 +437,10 @@
\item Mesh exported from CUBIT
\item Mesh constructed by hand (PyLith mesh ASCII format)
\end{itemize}
- \item Spatial databases for boundary and fault conditions
+ \item Spatial databases for physical properties, boundary
+ conditions, and rupture parameters
\begin{itemize}
- \item Simple ASCII files specify spatial variation of parameters
+ \item SCEC CVM-H, USGS Bay Area Velocity model, or simple ASCII files
\item Independent of discretization scheme and size
\end{itemize}
\end{itemize}
@@ -424,53 +470,24 @@
\end{itemize}
% ------------------------------------------------------------ SLIDE
-\foilhead{PyLith is a Community Code}
- \summary{Success of code depends on community participation}
+\foilhead{Crustal Deformation Modeling}
+ \summary{Overview of workflow for typical research problem}
- \begin{itemize}
- \item End-users (anyone who uses the code)
- \begin{itemize}
- \item Help define and prioritize features that should be added
- \item Report bugs/problems and suggest improvements
- \end{itemize}
- \item Expert users
- \begin{itemize}
- \item Help test alpha versions of releases
- \item Run benchmarks and report results
- \item Contribute meshing and visualization examples to documentation
- \item Add features following template (e.g., constitutive models)
- \end{itemize}
- \item Developer
- \begin{itemize}
- \item Define development strategy
- \item Implement new features and tests
- \item Write documentation
- \end{itemize}
- \end{itemize}
-
-% ------------------------------------------------------------ SLIDE
-\foilhead{Example: Slip on a Vertical Strike-Slip Fault}
- \summary{examples/3d/hex8}
-
\vfill
\begin{center}
- \includegraphics[scale=0.7]{figs/examplehex8}
+ \includegraphics[scale=0.9]{figs/workflow}
\end{center}
% ------------------------------------------------------------ SLIDE
-\foilhead{Workflow for Example}
- \summary{}
+\foilhead{Installing PyLith}
+ \summary{Download from {\tt geodynamics.org} of copy from CDROM}
- \begin{enumerate}
- \item Generate finite-element mesh using CUBIT (hex8 cells)
- \item Create {\tt .cfg} file with simulation parameters
- \item Create spatial database files with parameters for boundary
- conditions and faults
- \item Run PyLith
- \item Visualize results with ParaView
- \end{enumerate}
+ \vfill
+ Recommend copying PyLith and ParaView from CDROM with INSTALL files.
+ \vfill
+ Examples are in src/pylith/examples.
+ \vfill
-
% --------------------------------------------------------- DOCUMENT
\end{document}
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