[cig-commits] r16284 - in seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS: . Cluster Cluster/estimate_best_values_runs Cluster/estimate_best_values_runs/scaling_nodes Visualization Visualization/Blender Visualization/GMT Visualization/Gnuplot Visualization/Gnuplot/display_PREM_model Visualization/GoogleEarth Visualization/Grace Visualization/Paraview Visualization/Paraview/global_slice_util Visualization/Paraview/matlab Visualization/Paraview/mesh2vtu Visualization/VTK Visualization/opendx_AVS
danielpeter at geodynamics.org
danielpeter at geodynamics.org
Sat Feb 20 11:58:57 PST 2010
Author: danielpeter
Date: 2010-02-20 11:58:48 -0800 (Sat, 20 Feb 2010)
New Revision: 16284
Added:
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/DATA
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/estimate_best_values_runs.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/display_mesh_topology.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/mesh_scaling_processors_ES_japan.xls
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/mesh_scaling_processors_marenostrum.xls
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/bin_movie_009000.d.png
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/bin_sphere.blend
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/bin_sphere.jpg
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/readme.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/topo_globe.jpg
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/topo_gray.cpt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/ascii_movie.jpg
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/blue_white_red.cpt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/gmt_movie_009000.xyz.gif
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/gray_pyramid_inv.cpt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_gmt_movie_file.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_gmt_movie_file_qinya.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_ascii.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_ascii_PNG.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary_PNG.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary_gunzipped_PNG.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_seismos.gmt.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/readme.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/PAS.TS.LHZ.gnu
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/display_PREM_model/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/display_PREM_model/display_prem_model.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/display_PREM_model/plot_prem.gnu
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/draw_regular_2D_GLL_element_gnuplot.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/readme.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/animation.jpg
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/google-earth-kml.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/readme.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/create_record_section_Grace.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/create_record_section_Grace.in
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/readme.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/AVS_continent_boundaries.inp
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/copy-info.sh
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number.daniel.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number2.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/CMTSOLUTION
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/Makefile
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/constants.h
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/global_slice_number.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/make_az_stations.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/mod/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/normal_plane.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/obj/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/sub_slice_number.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/README.lyx
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/README.pdf
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/chunk_map.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/compact_array.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/distaz.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/gcarc_station.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/norm_rot.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/norm_rot_back.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/normal_plane.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/normal_plane_orth.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/rotmat.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/slice_number.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/slice_number2.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2norm.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2norm2.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2xyz.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/xsection_translate.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/xyz2tp.m
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/Makefile
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/cell2vtu.cxx
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/cell2vtu.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/century2xyz.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/mesh2vtu.cxx
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/mesh2vtu.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/points2vtu.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/surf2vtu.cxx
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/surf2vtu.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/ugrid.cxx
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/ugrid_pts.cxx
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraview-run.py
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraview_movie.000050.jpg
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraviewpython-example.py
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/readme.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/bin_image.png
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/blue_white_red.cpt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/convert_cpt_lookuptable_python.bash
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/gray_pyramid_inv.cpt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_VTK.py
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_VTK_gray.py
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_movie_GMT_binary_VTK.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/readme.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/DX_continent_boundaries.dx
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_cropped.dat
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_opaque.cm
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_transparent.cm
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/add_logo_to_images.csh
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/assemble_final_MPEG_movie.csh
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/constants_topo.h
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/continent_boundaries_gmt.dat
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_DX_to_AVS_slices.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_DX_to_AVS_surface.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_avs2dx_quads.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_lat_long_epicenter_OpenDX.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_lat_long_main_cities_OpenDX.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_palette_GMT_OpenDX.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_topo_bathy_to_OpenDX.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_continent_boundaries_AVS.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_continent_boundaries_DX.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_mpeg_OpenDX_sequences.csh
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_mpeg_title_sequences.csh
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/debug_val_proc_0.dx
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/earth_main_cities.dx
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/earth_topo_bathy.dx.bz2
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/epicenter.dx
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/frame_rate_MPEG.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/frame_rates_MPEG_movies.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/lat_long_main_cities_processed.dat
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/longlatdepth2xyz.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/min_max_topo_palette.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_basic.cfg
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_basic.net
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_rotating_Earth.cfg
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_rotating_Earth.net
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/ori_GMT_globe_palette.dat
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/ori_lat_long_main_cities_Web.dat
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/permute_cubit_2_opendx.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/readme.txt
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/red_blue_waves.cm
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/shrink_elements_OpenDX_mesh.pl
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visu_valence_central_cube.cfg
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visu_valence_central_cube.net
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visualize_mesh_DX.cfg
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visualize_mesh_DX.net
Removed:
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/create_record_section_Grace.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/create_record_section_Grace.in
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/display_PREM_model/
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/draw_regular_2D_GLL_element_gnuplot.f90
seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/opendx_AVS/
Log:
files related to visualizations have been collected in
SPECFEM3D_GLOBE/UTILS/Visualization
new files have been added for different visualizations:
SPECFEM3D_GLOBE/UTILS/Visualization/Blender
SPECFEM3D_GLOBE/UTILS/Visualization/GMT
SPECFEM3D_GLOBE/UTILS/Visualization/Gnuplot
SPECFEM3D_GLOBE/UTILS/Visualization/GoogleEarth
SPECFEM3D_GLOBE/UTILS/Visualization/Grace
SPECFEM3D_GLOBE/UTILS/Visualization/opendx_AVS
SPECFEM3D_GLOBE/UTILS/Visualization/Paraview
SPECFEM3D_GLOBE/UTILS/Visualization/VTK
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/DATA
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/DATA (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/DATA 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1 @@
+link ../../../DATA/
\ No newline at end of file
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/DATA
___________________________________________________________________
Name: svn:special
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/estimate_best_values_runs.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/estimate_best_values_runs.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/estimate_best_values_runs.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,329 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 0
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! February 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+! output a table with the best parameters to use for large runs on a given machine
+! in order to use the total amount of memory available in the best possible way
+
+ program estimate_best_values_runs
+
+ implicit none
+
+ include "../../../constants.h"
+
+ integer, parameter :: NB_COLUMNS_TABLE = 10
+
+! maximum total number of processors we want to see in the table
+! integer, parameter :: MAX_NUMBER_OF_PROCS = 100000
+! integer, parameter :: MAX_NUMBER_OF_PROCS = 4000 ! current maximum on pangu at Caltech
+! integer, parameter :: MAX_NUMBER_OF_PROCS = 10240 ! current maximum on MareNostrum in Barcelona
+! integer, parameter :: MAX_NUMBER_OF_PROCS = 62976 ! current maximum on Ranger in Texas
+! integer, parameter :: MAX_NUMBER_OF_PROCS = 212992 ! current maximum on BlueGene at LLNL
+ integer, parameter :: MAX_NUMBER_OF_PROCS = 12150 ! current maximum at CINES in France
+
+! minimum total number of processors we want to see in the table
+! integer, parameter :: MIN_NUMBER_OF_PROCS = 100
+ integer, parameter :: MIN_NUMBER_OF_PROCS = 1000
+
+! amount of memory installed per processor core on the system (in gigabytes)
+! double precision, parameter :: MAX_MEMORY_PER_CORE = 1.5d0 ! pangu at Caltech
+! double precision, parameter :: MAX_MEMORY_PER_CORE = 2.0d0 ! Ranger in Texas, MareNostrum in Barcelona
+ double precision, parameter :: MAX_MEMORY_PER_CORE = 4.0d0 ! CINES in France
+
+! base value depends if we implement three or four doublings (default is three)
+ integer, parameter :: NB_DOUBLING = 3
+ integer :: BASE_VALUE
+
+! parameters read from parameter file
+ integer MIN_ATTENUATION_PERIOD,MAX_ATTENUATION_PERIOD,NER_CRUST, &
+ NER_80_MOHO,NER_220_80,NER_400_220,NER_600_400,NER_670_600,NER_771_670, &
+ NER_TOPDDOUBLEPRIME_771,NER_CMB_TOPDDOUBLEPRIME,NER_OUTER_CORE, &
+ NER_TOP_CENTRAL_CUBE_ICB,NEX_XI,NEX_ETA, &
+ NPROC_XI,NPROC_ETA,NTSTEP_BETWEEN_OUTPUT_SEISMOS, &
+ NTSTEP_BETWEEN_READ_ADJSRC,NSTEP,NSOURCES,NTSTEP_BETWEEN_FRAMES, &
+ NTSTEP_BETWEEN_OUTPUT_INFO,NUMBER_OF_RUNS,NUMBER_OF_THIS_RUN,NCHUNKS,SIMULATION_TYPE, &
+ REFERENCE_1D_MODEL,THREE_D_MODEL,MOVIE_VOLUME_TYPE,MOVIE_START,MOVIE_STOP
+
+ double precision DT,ANGULAR_WIDTH_XI_IN_DEGREES,ANGULAR_WIDTH_ETA_IN_DEGREES,CENTER_LONGITUDE_IN_DEGREES, &
+ CENTER_LATITUDE_IN_DEGREES,GAMMA_ROTATION_AZIMUTH,ROCEAN,RMIDDLE_CRUST, &
+ RMOHO,R80,R120,R220,R400,R600,R670,R771,RTOPDDOUBLEPRIME,RCMB,RICB, &
+ R_CENTRAL_CUBE,RHO_TOP_OC,RHO_BOTTOM_OC,RHO_OCEANS,HDUR_MOVIE, &
+ MOVIE_TOP,MOVIE_BOTTOM,MOVIE_WEST,MOVIE_EAST,MOVIE_NORTH,MOVIE_SOUTH,RMOHO_FICTITIOUS_IN_MESHER
+
+ logical TRANSVERSE_ISOTROPY,ANISOTROPIC_3D_MANTLE,ANISOTROPIC_INNER_CORE, &
+ CRUSTAL,ELLIPTICITY,GRAVITY,ONE_CRUST,ROTATION,ISOTROPIC_3D_MANTLE, &
+ TOPOGRAPHY,OCEANS,MOVIE_SURFACE,MOVIE_VOLUME,MOVIE_COARSE,ATTENUATION_3D, &
+ RECEIVERS_CAN_BE_BURIED,PRINT_SOURCE_TIME_FUNCTION, &
+ SAVE_MESH_FILES,ATTENUATION,CASE_3D, &
+ ABSORBING_CONDITIONS,INCLUDE_CENTRAL_CUBE,INFLATE_CENTRAL_CUBE,SAVE_FORWARD, &
+ OUTPUT_SEISMOS_ASCII_TEXT,OUTPUT_SEISMOS_SAC_ALPHANUM,OUTPUT_SEISMOS_SAC_BINARY, &
+ ROTATE_SEISMOGRAMS_RT,HONOR_1D_SPHERICAL_MOHO,WRITE_SEISMOGRAMS_BY_MASTER,&
+ SAVE_ALL_SEISMOS_IN_ONE_FILE,USE_BINARY_FOR_LARGE_FILE,first_time,HETEROGEN_3D_MANTLE
+
+ character(len=150) LOCAL_PATH,MODEL
+
+! parameters deduced from parameters read from file
+ integer NPROC,NPROCTOT,NEX_PER_PROC_XI,NEX_PER_PROC_ETA,ratio_divide_central_cube
+ integer, dimension(MAX_NUMBER_OF_MESH_LAYERS) :: ner,ratio_sampling_array
+ integer, dimension(MAX_NUMBER_OF_MESH_LAYERS) :: doubling_index
+ logical, dimension(MAX_NUMBER_OF_MESH_LAYERS) :: this_region_has_a_doubling
+ double precision, dimension(MAX_NUMBER_OF_MESH_LAYERS) :: r_bottom,r_top
+ double precision, dimension(MAX_NUMBER_OF_MESH_LAYERS) :: rmins,rmaxs
+
+! this for all the regions
+ integer, dimension(MAX_NUM_REGIONS) :: NSPEC,NSPEC2D_XI,NSPEC2D_ETA, &
+ NSPEC2DMAX_XMIN_XMAX,NSPEC2DMAX_YMIN_YMAX, &
+ NSPEC2D_BOTTOM,NSPEC2D_TOP, &
+ NSPEC1D_RADIAL,NGLOB1D_RADIAL, &
+ NGLOB2DMAX_XMIN_XMAX,NGLOB2DMAX_YMIN_YMAX,nglob
+
+ double precision :: static_memory_size
+ integer :: NSPECMAX_ANISO_IC,NSPECMAX_ISO_MANTLE,NSPECMAX_TISO_MANTLE, &
+ NSPECMAX_ANISO_MANTLE,NSPEC_CRUST_MANTLE_ATTENUAT, &
+ NSPEC_INNER_CORE_ATTENUATION, &
+ NSPEC_CRUST_MANTLE_STR_OR_ATT,NSPEC_INNER_CORE_STR_OR_ATT, &
+ NSPEC_CRUST_MANTLE_STR_AND_ATT,NSPEC_INNER_CORE_STR_AND_ATT, &
+ NSPEC_CRUST_MANTLE_STRAIN_ONLY,NSPEC_INNER_CORE_STRAIN_ONLY, &
+ NSPEC_CRUST_MANTLE_ADJOINT, &
+ NSPEC_OUTER_CORE_ADJOINT,NSPEC_INNER_CORE_ADJOINT, &
+ NGLOB_CRUST_MANTLE_ADJOINT,NGLOB_OUTER_CORE_ADJOINT, &
+ NGLOB_INNER_CORE_ADJOINT,NSPEC_OUTER_CORE_ROT_ADJOINT, &
+ NSPEC_CRUST_MANTLE_STACEY,NSPEC_OUTER_CORE_STACEY, &
+ NGLOB_CRUST_MANTLE_OCEANS,NSPEC_OUTER_CORE_ROTATION
+
+ logical :: CUT_SUPERBRICK_XI,CUT_SUPERBRICK_ETA,EMULATE_ONLY,already_printed
+ integer, dimension(NB_SQUARE_CORNERS,NB_CUT_CASE) :: DIFF_NSPEC1D_RADIAL
+ integer, dimension(NB_SQUARE_EDGES_ONEDIR,NB_CUT_CASE) :: DIFF_NSPEC2D_XI,DIFF_NSPEC2D_ETA
+
+ integer :: c,counter,offset
+
+ double precision :: mem_per_core,percent
+
+! ************** PROGRAM STARTS HERE **************
+
+! count the total number of sources in the CMTSOLUTION file
+ NSOURCES = 1
+
+ BASE_VALUE = 2**NB_DOUBLING
+
+ first_time = .true.
+
+ print *
+ print *,'Number of GB of memory per core installed in the machine: ',MAX_MEMORY_PER_CORE
+ print *
+
+! make sure we do not start below the lower limit
+ if(6 * int(sqrt(MIN_NUMBER_OF_PROCS / 6.d0))**2 == MIN_NUMBER_OF_PROCS) then
+ offset = 0
+ else
+ offset = 1
+ endif
+
+! the total number of processors is 6 * NPROC_XI^2
+ do NPROC_XI = int(sqrt(MIN_NUMBER_OF_PROCS / 6.d0)) + offset,int(sqrt(MAX_NUMBER_OF_PROCS / 6.d0))
+
+ counter = 1
+ c = 0
+ NEX_XI = 0
+ already_printed = .false.
+
+! loop on the columns of the table
+ do while (counter <= NB_COLUMNS_TABLE)
+
+ c = c + 1
+ NEX_XI = BASE_VALUE * c * NPROC_XI
+
+! impose an upper limit on current "reasonably large" values to avoid an infinite loop
+! these values should be okay for the next few years (i.e., on machines around 1 petaflops)
+! (this written in August 2008)
+ if(c > 15 .or. NEX_XI > 6000) exit
+
+! also exclude very coarse meshes below NEX_XI = 64
+ if(NEX_XI >= 64 .and. mod(NEX_XI,2*BASE_VALUE) == 0) then
+
+ counter = counter + 1
+
+! read the parameter file and compute additional parameters
+ EMULATE_ONLY = .true.
+ call read_compute_parameters(MIN_ATTENUATION_PERIOD,MAX_ATTENUATION_PERIOD,NER_CRUST, &
+ NER_80_MOHO,NER_220_80,NER_400_220,NER_600_400,NER_670_600,NER_771_670, &
+ NER_TOPDDOUBLEPRIME_771,NER_CMB_TOPDDOUBLEPRIME,NER_OUTER_CORE, &
+ NER_TOP_CENTRAL_CUBE_ICB,NEX_XI,NEX_ETA,RMOHO_FICTITIOUS_IN_MESHER, &
+ NPROC_XI,NPROC_ETA,NTSTEP_BETWEEN_OUTPUT_SEISMOS, &
+ NTSTEP_BETWEEN_READ_ADJSRC,NSTEP,NTSTEP_BETWEEN_FRAMES, &
+ NTSTEP_BETWEEN_OUTPUT_INFO,NUMBER_OF_RUNS,NUMBER_OF_THIS_RUN,NCHUNKS,DT, &
+ ANGULAR_WIDTH_XI_IN_DEGREES,ANGULAR_WIDTH_ETA_IN_DEGREES,CENTER_LONGITUDE_IN_DEGREES, &
+ CENTER_LATITUDE_IN_DEGREES,GAMMA_ROTATION_AZIMUTH,ROCEAN,RMIDDLE_CRUST, &
+ RMOHO,R80,R120,R220,R400,R600,R670,R771,RTOPDDOUBLEPRIME,RCMB,RICB, &
+ R_CENTRAL_CUBE,RHO_TOP_OC,RHO_BOTTOM_OC,RHO_OCEANS,HDUR_MOVIE,MOVIE_VOLUME_TYPE, &
+ MOVIE_TOP,MOVIE_BOTTOM,MOVIE_WEST,MOVIE_EAST,MOVIE_NORTH,MOVIE_SOUTH,MOVIE_START,MOVIE_STOP, &
+ TRANSVERSE_ISOTROPY,ANISOTROPIC_3D_MANTLE, &
+ ANISOTROPIC_INNER_CORE,CRUSTAL,ELLIPTICITY,GRAVITY,ONE_CRUST, &
+ ROTATION,ISOTROPIC_3D_MANTLE,HETEROGEN_3D_MANTLE,TOPOGRAPHY,OCEANS,MOVIE_SURFACE, &
+ MOVIE_VOLUME,MOVIE_COARSE,ATTENUATION_3D,RECEIVERS_CAN_BE_BURIED, &
+ PRINT_SOURCE_TIME_FUNCTION,SAVE_MESH_FILES, &
+ ATTENUATION,REFERENCE_1D_MODEL,THREE_D_MODEL,ABSORBING_CONDITIONS, &
+ INCLUDE_CENTRAL_CUBE,INFLATE_CENTRAL_CUBE,LOCAL_PATH,MODEL,SIMULATION_TYPE,SAVE_FORWARD, &
+ NPROC,NPROCTOT,NEX_PER_PROC_XI,NEX_PER_PROC_ETA, &
+ NSPEC,NSPEC2D_XI,NSPEC2D_ETA, &
+ NSPEC2DMAX_XMIN_XMAX,NSPEC2DMAX_YMIN_YMAX,NSPEC2D_BOTTOM,NSPEC2D_TOP, &
+ NSPEC1D_RADIAL,NGLOB1D_RADIAL,NGLOB2DMAX_XMIN_XMAX,NGLOB2DMAX_YMIN_YMAX,NGLOB, &
+ ratio_sampling_array, ner, doubling_index,r_bottom,r_top,this_region_has_a_doubling,rmins,rmaxs,CASE_3D, &
+ OUTPUT_SEISMOS_ASCII_TEXT,OUTPUT_SEISMOS_SAC_ALPHANUM,OUTPUT_SEISMOS_SAC_BINARY, &
+ ROTATE_SEISMOGRAMS_RT,ratio_divide_central_cube,HONOR_1D_SPHERICAL_MOHO,CUT_SUPERBRICK_XI,CUT_SUPERBRICK_ETA,&
+ DIFF_NSPEC1D_RADIAL,DIFF_NSPEC2D_XI,DIFF_NSPEC2D_ETA,&
+ WRITE_SEISMOGRAMS_BY_MASTER,SAVE_ALL_SEISMOS_IN_ONE_FILE,USE_BINARY_FOR_LARGE_FILE,EMULATE_ONLY)
+
+ if(first_time) then
+ first_time = .false.
+ if(ATTENUATION) then
+ print *,'ATTENUATION = .true.'
+ else
+ print *,'ATTENUATION = .false.'
+ endif
+ endif
+
+!! compute memory usage per processor core
+! evaluate the amount of static memory needed by the solver
+ call memory_eval(OCEANS,ABSORBING_CONDITIONS,ATTENUATION,ANISOTROPIC_3D_MANTLE,&
+ TRANSVERSE_ISOTROPY,ANISOTROPIC_INNER_CORE,ROTATION,&
+ ONE_CRUST,doubling_index,this_region_has_a_doubling,&
+ ner,NEX_PER_PROC_XI,NEX_PER_PROC_ETA,ratio_sampling_array,&
+ NSPEC,nglob,SIMULATION_TYPE,MOVIE_VOLUME,SAVE_FORWARD, &
+ NSPECMAX_ANISO_IC,NSPECMAX_ISO_MANTLE,NSPECMAX_TISO_MANTLE, &
+ NSPECMAX_ANISO_MANTLE,NSPEC_CRUST_MANTLE_ATTENUAT, &
+ NSPEC_INNER_CORE_ATTENUATION, &
+ NSPEC_CRUST_MANTLE_STR_OR_ATT,NSPEC_INNER_CORE_STR_OR_ATT, &
+ NSPEC_CRUST_MANTLE_STR_AND_ATT,NSPEC_INNER_CORE_STR_AND_ATT, &
+ NSPEC_CRUST_MANTLE_STRAIN_ONLY,NSPEC_INNER_CORE_STRAIN_ONLY, &
+ NSPEC_CRUST_MANTLE_ADJOINT, &
+ NSPEC_OUTER_CORE_ADJOINT,NSPEC_INNER_CORE_ADJOINT, &
+ NGLOB_CRUST_MANTLE_ADJOINT,NGLOB_OUTER_CORE_ADJOINT, &
+ NGLOB_INNER_CORE_ADJOINT,NSPEC_OUTER_CORE_ROT_ADJOINT, &
+ NSPEC_CRUST_MANTLE_STACEY,NSPEC_OUTER_CORE_STACEY, &
+ NGLOB_CRUST_MANTLE_OCEANS,NSPEC_OUTER_CORE_ROTATION,static_memory_size)
+
+ mem_per_core = static_memory_size/1073741824.d0
+
+ percent = 100.d0 * mem_per_core / MAX_MEMORY_PER_CORE
+
+ if(percent > 100.d0) goto 777
+
+ if(percent < 0.d0) then
+ if(.not. already_printed) then
+ print *
+ print *,'NPROC, % of the machine, NPROC_XI, NEX_XI, GB used/core, % mem used/core:'
+ endif
+ already_printed = .true.
+ write(*,"(' ',i5,' ',f6.2,'% ',i3,' ',i4,' ',f6.2,'GB ',f6.2,'% **mesher fails/bug**')") &
+ 6*NPROC_XI**2,100.d0*6*NPROC_XI**2/dble(MAX_NUMBER_OF_PROCS),NPROC_XI,NEX_XI,mem_per_core,percent
+ goto 777
+
+ else if(percent >= 93.d0) then
+ if(.not. already_printed) then
+ print *
+ print *,'NPROC, % of the machine, NPROC_XI, NEX_XI, GB used/core, % mem used/core:'
+ endif
+ already_printed = .true.
+ write(*,"(' ',i5,' ',f6.2,'% ',i3,' ',i4,' ',f6.2,'GB ',f6.2,'% **too high**')") &
+ 6*NPROC_XI**2,100.d0*6*NPROC_XI**2/dble(MAX_NUMBER_OF_PROCS),NPROC_XI,NEX_XI,mem_per_core,percent
+ goto 777
+
+ else if(percent >= 85.d0) then
+ if(.not. already_printed) then
+ print *
+ print *,'NPROC, % of the machine, NPROC_XI, NEX_XI, GB used/core, % mem used/core:'
+ endif
+ already_printed = .true.
+ write(*,"(' ',i5,' ',f6.2,'% ',i3,' ',i4,' ',f6.2,'GB ',f6.2,'% **excellent**')") &
+ 6*NPROC_XI**2,100.d0*6*NPROC_XI**2/dble(MAX_NUMBER_OF_PROCS),NPROC_XI,NEX_XI,mem_per_core,percent
+ goto 777
+
+ else if(percent >= 80.d0) then
+ if(.not. already_printed) then
+ print *
+ print *,'NPROC, % of the machine, NPROC_XI, NEX_XI, GB used/core, % mem used/core:'
+ endif
+ already_printed = .true.
+ write(*,"(' ',i5,' ',f6.2,'% ',i3,' ',i4,' ',f6.2,'GB ',f6.2,'% **very good**')") &
+ 6*NPROC_XI**2,100.d0*6*NPROC_XI**2/dble(MAX_NUMBER_OF_PROCS),NPROC_XI,NEX_XI,mem_per_core,percent
+ goto 777
+
+ else if(percent >= 70.d0) then
+ if(.not. already_printed) then
+ print *
+ print *,'NPROC, % of the machine, NPROC_XI, NEX_XI, GB used/core, % mem used/core:'
+ endif
+ already_printed = .true.
+ write(*,"(' ',i5,' ',f6.2,'% ',i3,' ',i4,' ',f6.2,'GB ',f6.2,'% **not bad**')") &
+ 6*NPROC_XI**2,100.d0*6*NPROC_XI**2/dble(MAX_NUMBER_OF_PROCS),NPROC_XI,NEX_XI,mem_per_core,percent
+ goto 777
+
+ else if(percent >= 60.d0) then
+ if(.not. already_printed) then
+ print *
+ print *,'NPROC, % of the machine, NPROC_XI, NEX_XI, GB used/core, % mem used/core:'
+ endif
+ already_printed = .true.
+ write(*,"(' ',i5,' ',f6.2,'% ',i3,' ',i4,' ',f6.2,'GB ',f6.2,'% **possible**')") &
+ 6*NPROC_XI**2,100.d0*6*NPROC_XI**2/dble(MAX_NUMBER_OF_PROCS),NPROC_XI,NEX_XI,mem_per_core,percent
+
+! uncomment line below to completely suppress cases that give an occupancy below 50%
+ else ! if(percent >= 50.d0) then
+ if(.not. already_printed) then
+ print *
+ print *,'NPROC, % of the machine, NPROC_XI, NEX_XI, GB used/core, % mem used/core:'
+ endif
+ already_printed = .true.
+ write(*,"(' ',i5,' ',f6.2,'% ',i3,' ',i4,' ',f6.2,'GB ',f6.2,'%')") &
+ 6*NPROC_XI**2,100.d0*6*NPROC_XI**2/dble(MAX_NUMBER_OF_PROCS),NPROC_XI,NEX_XI,mem_per_core,percent
+ endif
+
+ endif
+ enddo
+
+ 777 continue
+
+ enddo
+
+ print *
+
+ end program estimate_best_values_runs
+
+!
+!---- include subroutines from the main code
+!
+
+ include "../../read_compute_parameters.f90"
+
+ include "../../memory_eval.f90"
+
+ include "../../read_value_parameters.f90"
+
+ include "../../get_value_parameters.f90"
+
+ include "../../auto_ner.f90"
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/display_mesh_topology.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/display_mesh_topology.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/display_mesh_topology.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,112 @@
+
+! display mesh topology (how processor numbers are assigned in the cubed sphere)
+
+ program display_mesh_topology
+
+ implicit none
+
+ integer, parameter :: NCHUNKS = 6
+
+! define block type based upon chunk number (between 1 and 6)
+! do not change this numbering, chunk AB must be number 1 for central cube
+ integer, parameter :: CHUNK_AB = 1
+ integer, parameter :: CHUNK_AC = 2
+ integer, parameter :: CHUNK_BC = 3
+ integer, parameter :: CHUNK_AC_ANTIPODE = 4
+ integer, parameter :: CHUNK_BC_ANTIPODE = 5
+ integer, parameter :: CHUNK_AB_ANTIPODE = 6
+
+ integer NPROC_XI,NPROC_ETA,NPROC
+ integer iproc_xi,iproc_eta,ichunk
+
+! addressing for all the slices
+ integer, dimension(:,:,:), allocatable :: addressing
+
+ print *
+ print *,'enter the number of processors in each direction of each of the 6 blocks (NPROC_XI):'
+ print *
+ read(*,*) NPROC_XI
+
+ NPROC_ETA = NPROC_XI
+
+! total number of processors in each of the six chunks
+ NPROC = NPROC_XI * NPROC_ETA
+
+ print *
+ print *,'the total number of processors used is ',NCHUNKS*NPROC
+ print *
+
+ allocate(addressing(NCHUNKS,0:NPROC_XI-1,0:NPROC_ETA-1))
+
+! loop on all the chunks to create global slice addressing for solver
+ do ichunk = 1,NCHUNKS
+ do iproc_eta=0,NPROC_ETA-1
+ do iproc_xi=0,NPROC_XI-1
+ addressing(ichunk,iproc_xi,iproc_eta) = (ichunk-1)*NPROC + iproc_eta * NPROC_XI + iproc_xi
+ enddo
+ enddo
+ enddo
+
+! output a topology map of slices
+ write(*,*) 'Bloc 1'
+ do iproc_xi = NPROC_XI-1, 0, -1
+ write(*,'(2x)',advance='no')
+ do iproc_eta = NPROC_ETA -1, 0, -1
+ write(*,'(i5)',advance='no') addressing(CHUNK_AB,iproc_xi,iproc_eta)
+ enddo
+ write(*,'(1x)',advance='yes')
+ enddo
+ write(*, *) ' '
+
+ write(*,*) 'Bloc 2'
+ do iproc_xi = NPROC_XI-1, 0, -1
+ write(*,'(2x)',advance='no')
+ do iproc_eta = NPROC_ETA -1, 0, -1
+ write(*,'(i5)',advance='no') addressing(CHUNK_BC,iproc_xi,iproc_eta)
+ enddo
+ write(*,'(1x)',advance='yes')
+ enddo
+ write(*, *) ' '
+
+ write(*,*) 'Bloc 3'
+ do iproc_xi = NPROC_XI-1, 0, -1
+ write(*,'(2x)',advance='no')
+ do iproc_eta = NPROC_ETA -1, 0, -1
+ write(*,'(i5)',advance='no') addressing(CHUNK_AC,iproc_xi,iproc_eta)
+ enddo
+ write(*,'(1x)',advance='yes')
+ enddo
+ write(*, *) ' '
+
+ write(*,*) 'Bloc 4'
+ do iproc_xi = NPROC_XI-1, 0, -1
+ write(*,'(2x)',advance='no')
+ do iproc_eta = NPROC_ETA -1, 0, -1
+ write(*,'(i5)',advance='no') addressing(CHUNK_BC_ANTIPODE,iproc_xi,iproc_eta)
+ enddo
+ write(*,'(1x)',advance='yes')
+ enddo
+ write(*, *) ' '
+
+ write(*,*) 'Bloc 5'
+ do iproc_xi = NPROC_XI-1, 0, -1
+ write(*,'(2x)',advance='no')
+ do iproc_eta = NPROC_ETA -1, 0, -1
+ write(*,'(i5)',advance='no') addressing(CHUNK_AB_ANTIPODE,iproc_xi,iproc_eta)
+ enddo
+ write(*,'(1x)',advance='yes')
+ enddo
+ write(*, *) ' '
+
+ write(*,*) 'Bloc 6'
+ do iproc_xi = NPROC_XI-1, 0, -1
+ write(*,'(2x)',advance='no')
+ do iproc_eta = NPROC_ETA -1, 0, -1
+ write(*,'(i5)',advance='no') addressing(CHUNK_AC_ANTIPODE,iproc_xi,iproc_eta)
+ enddo
+ write(*,'(1x)',advance='yes')
+ enddo
+ write(*, *) ' '
+
+ end program display_mesh_topology
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/mesh_scaling_processors_ES_japan.xls
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/mesh_scaling_processors_ES_japan.xls
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/mesh_scaling_processors_marenostrum.xls
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Cluster/estimate_best_values_runs/scaling_nodes/mesh_scaling_processors_marenostrum.xls
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/bin_movie_009000.d.png
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/bin_movie_009000.d.png
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/bin_sphere.blend
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/bin_sphere.blend
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/bin_sphere.jpg
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/bin_sphere.jpg
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/readme.txt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/readme.txt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/readme.txt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,55 @@
+--------------------------------
+readme
+--------------------------------
+
+Blender, open source, cross platform suite of tools for 3D creation
+http://www.blender.org/
+
+
+
+- load example file 'bin_sphere.blend':
+
+ run Blender:
+
+ -> Menu -> File -> Open...
+
+ select 'bin_sphere.blend'
+
+
+ to render image:
+
+ -> Menu -> Render -> Render Current Frame
+
+
+ it needs: ./topo_globe.jpg
+ ./bin_movie_009000.d.png
+
+ these images are used as textures on a sphere:
+
+ - a wavefield PNG image created with GMT:
+
+ > ../GMT/plot_movie_GMT_binary.pl OUTPUT_FILES/bin_movie_*.d
+
+ - a topography image 'topo_globe.jpg':
+
+ to create a topographic global map with GMT,
+
+ 1. create a grid file
+
+ > grdraster ETOPO2 -Rg -I2m -Getopo2.grd
+
+ 2. create a gradient file
+
+ > grdgradient etopo2.grd -Nt1 -A45 -Getopo2gradient.grd -V
+
+ 3. render image with gradient illumination
+ (must copy topo_gray.cpt to current directory)
+
+ projection uses: plate caree projection -JQ
+
+ > grdimage etopo2.grd -Ietopo2gradient.grd -JQ0/0/15 -Ctopo_gray.cpt -V -P > topo_globe.ps
+
+ 4. convert to jpg using convert command from ImageMagick (http://www.imagemagick.org)
+
+ > convert topo_globe.ps topo_globe.jpg
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/topo_globe.jpg
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/topo_globe.jpg
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/topo_gray.cpt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/topo_gray.cpt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Blender/topo_gray.cpt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,106 @@
+# cpt file created by: makecpt -Cgray -T0/1/0.01
+#COLOR_MODEL = RGB
+#
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/ascii_movie.jpg
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/ascii_movie.jpg
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/blue_white_red.cpt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/blue_white_red.cpt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/blue_white_red.cpt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,261 @@
+# cpt file created by: makecpt -V -Cpolar -T0/255/1 -Z
+#COLOR_MODEL = RGB
+#
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/gmt_movie_009000.xyz.gif
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/gmt_movie_009000.xyz.gif
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/gray_pyramid_inv.cpt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/gray_pyramid_inv.cpt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/gray_pyramid_inv.cpt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,261 @@
+# cpt file created by: makecpt -V -I -Cgray -T0/128/1 -Z
+#COLOR_MODEL = RGB
+#
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+233 211 211 211 234 213 213 213
+234 213 213 213 235 215 215 215
+235 215 215 215 236 217 217 217
+236 217 217 217 237 219 219 219
+237 219 219 219 238 221 221 221
+238 221 221 221 239 223 223 223
+239 223 223 223 240 225 225 225
+240 225 225 225 241 227 227 227
+241 227 227 227 242 229 229 229
+242 229 229 229 243 231 231 231
+243 231 231 231 244 233 233 233
+244 233 233 233 245 235 235 235
+245 235 235 235 246 237 237 237
+246 237 237 237 247 239 239 239
+247 239 239 239 248 241 241 241
+248 241 241 241 249 243 243 243
+249 243 243 243 250 245 245 245
+250 245 245 245 251 247 247 247
+251 247 247 247 252 249 249 249
+252 249 249 249 253 251 251 251
+253 251 251 251 254 253 253 253
+254 253 253 253 255 255 255 255
+B 0 0 0
+F 0 0 0
+N 0 0 0
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_gmt_movie_file.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_gmt_movie_file.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_gmt_movie_file.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,95 @@
+#!/usr/bin/perl
+#
+# reads in files produced from xcreate_movie_AVS_DX for GMT plotting
+# and creates gif files (with option for one-color transparency)
+#
+
+use Getopt::Std;
+use POSIX;
+
+sub Usage {
+ print STDERR <<EOF;
+
+Usage: plot_gmt_movie_file.pl file_name
+
+ ex. ./plot_gmt_movie_file.pl OUTPUT_FILES/gmt_movie_000***.xyz
+
+EOF
+exit(1)
+}
+
+if (!getopts('l:L:cdts')) {die('Check input arguments\n');}
+ at ARGV > 0 or Usage();
+
+
+#######################################################
+## region
+# global
+$R = "-Rd";
+
+#plate carré projection
+$JM = "-JQ0/0/15";
+
+# use white as transparent color
+$transparency = 0;
+
+#######################################################
+
+
+open(CSH,">plot_movie.csh");
+print CSH "gmtset BASEMAP_TYPE plain ANOT_FONT_SIZE 9 HEADER_FONT_SIZE 15\n";
+print CSH "makecpt -Cpolar -T0/255/1 -Z -V > grd.cpt\n";
+
+foreach $file (@ARGV) {
+
+ if (not -f $file) {die("No $file\n");}
+
+ print "Processing frame $file...\n";
+
+ open FILE, "$file" or die $!;
+ @lines_f = <FILE>;
+ close(FILE);
+ $nlines_f = @lines_f;
+
+ $ps_file = "$file.ps";
+
+ $grdfile = "ascii_movie.grd";
+ $B = " -B10/10wesn ";
+
+ # start ps-file
+ print CSH "psxy -JX1/1 -R0/1/0/1 -K -P -V -X1 -Y1 <<EOF >$ps_file\nEOF\n";
+
+
+ print CSH "xyz2grd $file -I0.4/0.4 $R -G$grdfile -N127.5 -V \n";
+ print CSH "grdsample $grdfile -G$grdfile.1 -I0.4/0.4 -F -V\n";
+ print CSH "grdimage $grdfile.1 $JM $R -Cgrd.cpt $B -K -O -V -P >> $ps_file\n";
+
+ # coast
+ print CSH "pscoast $JM $R -W0.1 -Dl -A10000 -K -O -P -V >> $ps_file \n";
+ # color scale
+ print CSH "psscale -D3/-0.5/3/0.2h -Ba50:'': -Cgrd.cpt -K -O -V -P >> $ps_file\n";
+ # base map
+ print CSH "psbasemap -R -J -Ba90/a30:.'':WeSn -O -K -P -V >> $ps_file\n";
+
+ # end ps-file
+ print CSH "psxy -JX1/1 -R0/1/0/1 -O -P -V <<EOF >>$ps_file\nEOF\n";
+
+ # convert to gif
+ if( $transparency == 1 ){
+ print CSH "convert -crop 1080x540+72+6 -transparent 'rgb(254,254,255)' $ps_file $file.gif\n";
+ }
+ else{
+ print CSH "convert -crop 1080x540+72+6 $ps_file $file.gif\n";
+ }
+
+ print CSH "rm -f $ps_file\n";
+
+ print CSH "\necho $file.gif\n";
+}
+close(CSH);
+
+print "\nplotting... \n\n";
+
+system("csh -fv plot_movie.csh");
+system("rm -f plot_movie.csh $grdfile $grdfile.1 grd.cpt");
+
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_gmt_movie_file.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_gmt_movie_file_qinya.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_gmt_movie_file_qinya.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_gmt_movie_file_qinya.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,85 @@
+#!/usr/bin/perl -w
+#
+# reads in files produced from xcreate_movie_AVS_DX for GMT plotting
+#
+
+use POSIX;
+
+$cmt_file = "CMTSOLUTION";
+if (not -f $cmt_file) {die("No such file as $cmt_file");}
+(undef,undef,undef,,undef,undef,undef,undef,undef,undef,$elat,$elon) = &get_cmt($cmt_file);
+
+$dx = 0.0145833333332916;
+$dy = 0.01197916666667;
+ at frame = ("04","08","12","16","20","24","28","32","36","40","44","48");
+#@frame = ("000800","001600","002400","003200","004000","004800","005600","006400","007200","008000","008800","009600");
+$nframe = @frame;
+$ncolumn = 3;
+$nrow = ceil($nframe/$ncolumn);
+
+$xlen = 7; $ylen = 9;
+$drow = $ylen/$nrow; $dcolumn = $xlen/$ncolumn;
+$dcolumn1 = $dcolumn * 0.9;
+$x0 = 0; $y0 = 0;
+
+$R = "-R-120.3/-114.7/32.2/36.8";
+$JM = "-JM${dcolumn1}i";
+$ps_file = "movie.ps";
+$null = 127.5000;
+
+open(CSH,">plot_movie.csh");
+print CSH "gmtset BASEMAP_TYPE plain ANOT_FONT_SIZE 9 HEADER_FONT_SIZE 15\n";
+print CSH "makecpt -Cpolar -T0/255/2 -Z -V > grd.cpt\n";
+print CSH "psxy -JX1/1 -R0/1/0/1 -K -P -V -X1 -Y1 <<EOF >$ps_file\nEOF\n";
+print CSH "psxy -JX1/1 -R0/1/0/1 -X$x0 -Y$y0 -K -O -P -V <<EOF >>$ps_file\nEOF\n";
+
+column: for ($j=0; $j<$ncolumn; $j++) {
+ for ($i=0;$i<$nrow; $i++) {
+ if ($i + $j*$nrow + 1 > $nframe) {last column;}
+ $frame = $frame[$i+$nrow* $j]; $time = $frame * 200 * 0.009 - 1.0;
+ $file = "gmt_movie_0000${frame}.xyz";
+ if (not -f $file) {die("No $file\n");}
+ print "Processing frame $file...\n";
+ $grdfile = "gmt_movie_0000${frame}.grd";
+ $xpos = $j * $dcolumn; $ypos = $drow * ($nrow - $i-1);
+ $XY = " -X$xpos -Y$ypos "; $NXY = " -X-$xpos -Y-$ypos ";
+ $B = " -B2/2wesn ";
+ print CSH "awk '\$3 != $null {print \$0}' $file | xyz2grd -I$dx/$dy $R -G$grdfile -N128 -V \n";
+ print CSH "grdsample $grdfile -G$grdfile.1 -I0.00833333/0.00833333 -F -V\n";
+ print CSH "grdimage $grdfile.1 $JM $R $XY -Itopo.int -Cgrd.cpt $B -K -O -V -P >> $ps_file\n";
+ print CSH "pscoast $JM $R -W4 -Na -Dh -K -O -P -V >> $ps_file \n";
+ print CSH "psxy $JM $R -M -W2 -K -O -P -V /home/lqy/datalib/jennings.xy >> $ps_file\n";
+ print CSH "psxy $JM $R -Sa0.10 -W1 -G0/0/0 -K -O -P -V <<EOF >> $ps_file\n$elon $elat\nEOF\n";
+ print CSH "pstext $JM $R -N -W255/255/255 -K -O -P -V <<EOF >>$ps_file \n";
+ print CSH "-114.8 36.5 12 0 0 RT time = $time s \nEOF\n";
+ print CSH "psxy -JX1/1 -R0/1/0/1 $NXY -K -O -P -V <<EOF >>$ps_file\nEOF\n";
+ }
+}
+print CSH "psxy -JX1/1 -R0/1/0/1 -O -P -V <<EOF >>$ps_file\nEOF\n";
+close(CSH);
+
+system("csh -fv plot_movie.csh; xv $ps_file");
+
+
+#######################################
+sub get_cmt {
+ my ($cmt_file)=@_;
+ open(CMT, "$cmt_file") or die("Error opening $cmt_file\n");
+ @cmt = <CMT>;
+ my(undef,$oyear,$omonth,$oday,$ohr,$omin,$osec1,undef,undef,undef,$mw,undef, at evnm)=split(" ",$cmt[0]);
+ my($osec,$omsec)=split(/\./,$osec1); $omsec=$omsec*10;
+ my(undef,undef,$evid) = split(" ",$cmt[1]);
+ my(undef,undef,$tshift)=split(" ",$cmt[2]);
+ my(undef,undef,$hdur)=split(" ",$cmt[3]);
+ my(undef,$elat)=split(" ",$cmt[4]);
+ my(undef,$elon)=split(" ",$cmt[5]);
+ my(undef,$edep)=split(" ",$cmt[6]);
+ my(undef,$Mrr)=split(" ",$cmt[7]);
+ my(undef,$Mtt)=split(" ",$cmt[8]);
+ my(undef,$Mpp)=split(" ",$cmt[9]);
+ my(undef,$Mrt)=split(" ",$cmt[10]);
+ my(undef,$Mrp)=split(" ",$cmt[11]);
+ my(undef,$Mtp)=split(" ",$cmt[12]);
+ close(CMT);
+ return ($oyear,$omonth,$oday,$ohr,$omin,$osec,$omsec,$tshift,$hdur,$elat,$elon,$edep,$Mrr,$Mtt,$Mpp,$Mrt,$Mrp,$Mtp,$mw, at evnm);
+}
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_ascii.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_ascii.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_ascii.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,142 @@
+#!/usr/bin/perl
+#
+# reads in ascii files produced from xcreate_movie_GMT_global
+# and creates ps files
+#
+
+use Getopt::Std;
+use POSIX;
+
+sub Usage {
+ print STDERR <<EOF;
+
+Usage: plot_movie_GMT_ascii.pl file_name
+
+ ex. ./plot_movie_GMT_ascii.pl OUTPUT_FILES/ascii_movie_000100.d
+
+EOF
+exit(1)
+}
+
+if (!getopts('l:L:cdts')) {die('Check input arguments\n');}
+ at ARGV > 0 or Usage();
+
+#######################################################
+## PARAMETERS
+
+# point locations
+$xy_file = "OUTPUT_FILES/ascii_movie.xy";
+
+# global region
+$R = "-Rd";
+
+#plate carré projection
+$JM = "-JQ0/0/5";
+
+#interpolation
+$interp = "-I1.5/1.5";
+#######################################################
+
+# parameters
+$grdfile = "movie.grd";
+$B = " -B10/10wesn ";
+
+open(CSH,">plot_movie.csh");
+print CSH "gmtset BASEMAP_TYPE plain ANOT_FONT_SIZE 9 HEADER_FONT_SIZE 15\n";
+print CSH "makecpt -Cpolar -T0/255/2 -Z -V > grd.cpt\n";
+
+print "Processing locations: $xy_file\n";
+
+open FILE, "$xy_file" or die $!;
+ at lines = <FILE>;
+close(FILE);
+$nlines = @lines;
+print " number of lines: $nlines\n\n";
+
+
+foreach $file (@ARGV) {
+
+ if (not -f $file) {die("No $file\n");}
+
+ print "Processing frame $file...\n";
+
+ # reads displacement file
+ open FILE, "$file" or die $!;
+ @lines_f = <FILE>;
+ close(FILE);
+ $nlines_f = @lines_f;
+
+ if ($nlines_f != $nlines) {die("number of lines differ\n");}
+
+ # determines min/max of displacements
+ $minmax = `minmax $file | awk '{print \$5}' | sed -e "s:<: :" | sed -e "s:>: :" `;
+ chomp($minmax);
+ ($min,$max) = split("/",$minmax);
+ print "file min/max: $minmax \n min: $min\n max: $max\n";
+
+ # transforms displacements to range [0,255] for colors
+ if( abs($min) > abs($max) ){$max = abs($min);}
+ open FILE, ">$file.xyz" or die $!;
+ for($i=0;$i<$nlines;$i++){
+ # scale between 0,1
+ $val = ($lines_f[$i] + $max)/(2.0*$max);
+ # scale between 0, 255
+ $val = $val * 255.0;
+
+ $coord = $lines[$i];
+ chomp($coord);
+ print FILE "$coord $val \n";
+ }
+ close(FILE);
+
+ # determines new min/max of scaled displacements
+ $minmax2 = `minmax $file.xyz | awk '{print \$7}' | sed -e "s:<: :" | sed -e "s:>: :" `;
+ chomp($minmax2);
+ ($min2,$max2) = split("/",$minmax2);
+ print " min2/max2: $minmax2 \n\n";
+
+ #print CSH "paste $xy_file $file > $file.xyz \n";
+
+ # output file
+ $ps_file = "$file.ps";
+
+ # interpolates displacement field
+ print CSH "xyz2grd $file.xyz $interp $R -G$grdfile -N127.5 -V \n";
+ print CSH "grdsample $grdfile -G$grdfile.1 $interp -F -V\n";
+ print CSH "grdimage $grdfile.1 $JM $R -Cgrd.cpt $B -K -V -P > $ps_file\n";
+
+ # draws grid points
+ print CSH "awk '{print \$0}' $file.xyz | psxy -J -R -Sc0.01 -Cgrd.cpt -V -K -O -P >> $ps_file \n";
+
+ # river, states, coast
+ #print CSH "pscoast $JM $R -W4 -Na -Dh -K -O -P -V >> $ps_file \n";
+
+ # coast only
+ print CSH "pscoast $JM $R -W1 -Dl -A10000 -K -O -P -V >> $ps_file \n";
+
+ # color scale
+ print CSH "psscale -D3/-0.5/3/0.2h -Ba50:'': -Cgrd.cpt -K -O -V -P >> $ps_file\n";
+
+ # base map
+ print CSH "psbasemap -R -J -Ba90/a30:.'':WeSn -O -P -V >> $ps_file\n";
+
+ # remove temporary data file
+ print CSH "rm -f $file.xyz \n";
+
+ # removes temporary images
+
+ print CSH "echo \n";
+ print CSH "echo 'plotted: $file.ps' \n";
+ print CSH "echo \n";
+
+}
+close(CSH);
+
+print "\nplotting... \n\n";
+
+# executes script
+system("csh -f plot_movie.csh");
+
+# cleanup
+system("rm -f plot_movie.csh");
+system("rm -f $grdfile $grdfile.1 grd.cpt");
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_ascii.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_ascii_PNG.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_ascii_PNG.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_ascii_PNG.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,143 @@
+#!/usr/bin/perl
+#
+# reads in ascii files produced from xcreate_movie_GMT_global
+# and creates PNG files with transparency
+#
+
+use Getopt::Std;
+use POSIX;
+
+sub Usage {
+ print STDERR <<EOF;
+
+Usage: plot_movie_GMT_ascii_PNG.pl file_name
+
+ ex. ./plot_movie_GMT_ascii_PNG.pl OUTPUT_FILES/ascii_movie_*.d
+
+ converts ps-file to *.png file format with transparency
+
+EOF
+exit(1)
+}
+
+if (!getopts('l:L:cdts')) {die('Check input arguments\n');}
+ at ARGV > 0 or Usage();
+
+
+#######################################################
+## PARAMETERS
+
+# point locations
+$xy_file = "OUTPUT_FILES/ascii_movie.xy";
+
+# global region
+$R = "-Rd";
+
+#plate carré projection
+$JM = "-JQ0/0/15";
+
+# interpolation on a regular spaced grid file
+$mesh_degree = "0.8/0.8";
+$intp_degree = "0.1/0.1";
+
+# verbosity
+$verbose = ""; # "-V";
+# grid
+$grdfile = "ascii_movie.grd";
+# annotation
+$B = " -B10/10wesn ";
+
+# color tables
+$colorcpt = "blue_white_red.cpt";
+$maskcpt = "gray_pyramid_inv.cpt";
+
+#######################################################
+
+open FILE, "$xy_file" or die $!;
+ at lines = <FILE>;
+close(FILE);
+$nlines = @lines;
+
+
+open(CSH,">plot_movie.csh");
+print CSH "gmtset BASEMAP_TYPE plain ANOT_FONT_SIZE 9 HEADER_FONT_SIZE 15\n";
+
+
+foreach $file (@ARGV) {
+
+ if (not -f $file) {die("No $file\n");}
+
+ print "Processing frame $file...\n";
+
+ # reads displacement file
+ open FILE, "$file" or die $!;
+ @lines_f = <FILE>;
+ close(FILE);
+ $nlines_f = @lines_f;
+
+ if ($nlines_f != $nlines) {die("number of lines differ\n");}
+
+ # determines min/max of displacements
+ $minmax = `minmax $file | awk '{print \$5}' | sed -e "s:<: :" | sed -e "s:>: :" `;
+ chomp($minmax);
+ ($min,$max) = split("/",$minmax);
+
+ # transforms displacements to range [0,255] for colors
+ if( abs($min) > abs($max) ){$max = abs($min);}
+ open FILE, ">$file.xyz" or die $!;
+ for($i=0;$i<$nlines;$i++){
+ # scale between 0,1
+ $val = ($lines_f[$i] + $max)/(2.0*$max);
+ # scale between 0, 255
+ $val = $val * 255.0;
+
+ # prints value together with coordinates
+ $coord = $lines[$i];
+ chomp($coord);
+ #if( $val < 107 || $val > 148) {print FILE "$coord $val \n";}
+ print FILE "$coord $val \n";
+ }
+ close(FILE);
+
+ # interpolates values on a regular spaced grid file
+ print CSH "xyz2grd $file.xyz -I$mesh_degree $R -G$grdfile $verbose \n"; # -N127.5
+ print CSH "grdsample $grdfile -I$intp_degree -G$grdfile.1 -F $verbose\n";
+
+
+ $ps_file = "$file.ps";
+
+ # start ps-file
+ print CSH "psxy -JX1/1 -R0/1/0/1 -K -P $verbose -X1 -Y1 <<EOF >$ps_file\nEOF\n";
+ print CSH "grdimage $grdfile.1 $JM $R -Q -C$colorcpt $B -K -O $verbose -P >> $ps_file\n";
+ print CSH "psxy -JX1/1 -R0/1/0/1 -O -P $verbose <<EOF >>$ps_file\nEOF\n";
+ # end ps-file
+
+ # start ps-file mask
+ print CSH "psxy -JX1/1 -R0/1/0/1 -K -P $verbose -X1 -Y1 <<EOF >$ps_file.mask\nEOF\n";
+ print CSH "grdimage $grdfile.1 $JM $R -Q -C$maskcpt $B -K -O $verbose -P >> $ps_file.mask\n";
+ print CSH "psxy -JX1/1 -R0/1/0/1 -O -P $verbose <<EOF >>$ps_file.mask\nEOF\n";
+ # end ps-file mask
+
+ # convert to png
+ print CSH "convert -crop 1080x540+6+6 $ps_file $file.disp.png\n";
+ print CSH "convert -crop 1080x540+6+6 $ps_file.mask $file.mask.png\n";
+
+ # creates file with transparency (opacity)
+ print CSH "composite -compose CopyOpacity $file.mask.png $file.disp.png $file.png\n";
+
+ print CSH "\necho $file.png\n";
+
+ # remove temporary data file
+ print CSH "rm -f $file.xyz\n";
+
+ # removes temporary images
+ print CSH "rm -f $ps_file $ps_file.mask $file.mask.png $file.disp.png \n";
+
+}
+close(CSH);
+
+print "\nplotting... \n\n";
+
+system("csh -fv plot_movie.csh");
+system("rm -f plot_movie.csh $grdfile $grdfile.1");
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,214 @@
+#!/usr/bin/perl
+#
+# reads in binary files produced from xcreate_movie_GMT_global
+# and creates ps files
+#
+
+use Getopt::Std;
+use POSIX;
+
+sub Usage {
+ print STDERR <<EOF;
+
+Usage: plot_movie_GMT_binary.pl file_name
+
+ ex. ./plot_movie_GMT_binary.pl OUTPUT_FILES/bin_movie_*.d
+
+EOF
+exit(1)
+}
+
+if (!getopts('l:L:cdts')) {die('Check input arguments\n');}
+ at ARGV > 0 or Usage();
+
+
+#######################################################
+## PARAMETERS
+
+# point locations
+$xy_file = "OUTPUT_FILES/bin_movie.xy";
+
+
+# global region
+$R = "-Rd";
+
+#plate carré projection
+$JM = "-JQ0/0/15";
+
+# interpolation
+$interp = "-I1.5/1.5";
+#######################################################
+
+# verbosity
+$verbose = ""; # "-V";
+# grid
+$grdfile = "movie.grd";
+# annotation
+$B = " -B10/10wesn ";
+
+open(CSH,">plot_movie.csh");
+print CSH "gmtset BASEMAP_TYPE plain ANOT_FONT_SIZE 9 HEADER_FONT_SIZE 15\n";
+print CSH "makecpt -Cpolar -T0/255/2 -Z -V > grd.cpt\n";
+
+print "Processing locations: $xy_file\n";
+
+# reads in locations (binary data)
+open FILE, "$xy_file" or die $!;
+binmode FILE;
+
+ at lines= () ;
+$line="";
+$is_ok = 1;
+$count = 0;
+while ( $is_ok != 0) {
+ read FILE, $junk, 4;
+
+ $n1 = read FILE, $data1, 4;
+ if( $n1 != 0 ){
+ ($lon) = unpack( "f",$data1);
+ }
+ $n2 = read FILE, $data2, 4;
+ if( $n2 != 0 ){
+ ($lat) = unpack( "f",$data2);
+ }
+ read FILE, $junk, 4;
+
+ #print "$n1 $n2 bytes read: lon=$lon \t \t lat=$lat\n";
+
+ if( $n1 != 0 && $n2 != 0 ){
+ $line = "$lon $lat \n";
+ push(@lines, $line);
+ $is_ok = 1;
+ }
+ else{ $is_ok = 0;}
+
+ $count++;
+ #if( $count == 8 ) {die("end");}
+}
+$nlines = @lines;
+close(FILE);
+print " number of lines: $nlines\n\n";
+
+
+foreach $file (@ARGV) {
+
+ if (not -f $file) {die("No $file\n");}
+
+ print "Processing frame $file...\n";
+
+ # reads displacement file (binary data)
+ open FILE, "$file" or die $!;
+ binmode FILE;
+
+ @lines_f= () ;
+ $line="";
+ $is_ok = 1;
+ $min = 1.e30;
+ $max = -1.e30;
+ while ( $is_ok != 0) {
+ read FILE, $junk, 4;
+
+ $n1 = read FILE, $data1, 4;
+ if( $n1 != 0 ){
+ ($val) = unpack( "f",$data1);
+ }
+
+ read FILE, $junk, 4;
+
+ if( $power_scaling > 0 ) {
+ if( $val > 0 ){ $val = $val**$power_scaling;
+ }else{
+ $val = - abs($val)**$power_scaling;
+ }
+
+ }
+
+ #print "$n1 bytes read: value=$val \n";
+
+ if( $n1 != 0 ){
+ $line = "$val \n";
+ push(@lines_f, $line);
+
+ # determines min/max of displacements
+ if( $val < $min) {$min = $val;}
+ if( $val > $max) {$max = $val;}
+
+ $is_ok = 1;
+ }
+ else{ $is_ok = 0;}
+ }
+ $nlines_f = @lines_f;
+ close(FILE);
+
+ if ($nlines_f != $nlines) {die("number of lines differ\n");}
+
+
+ # transforms displacements to range [0,255] for colors
+ if( abs($min) > abs($max) ){$max = abs($min);}
+ open FILE, ">$file.xyz" or die $!;
+
+ @elem_corners = ();
+ @elem_val = ();
+ for($i=0;$i<$nlines;$i++){
+ # scale between 0,1
+ $val = ($lines_f[$i] + $max)/(2.0*$max);
+ # scale between 0, 255
+ $val = $val * 255.0;
+
+ # prints value together with coordinates
+ $coord = $lines[$i];
+ chomp($coord);
+
+ # adds point
+ print FILE "$coord $val \n";
+
+ # stores values in arrays
+ push(@elem_val, $val );
+ $line = "$coord $val ";
+ push(@elem_corners, $line);
+ }
+ close(FILE);
+
+ # output file
+ $ps_file = "$file.ps";
+
+ # interpolates displacement field
+ print CSH "xyz2grd $file.xyz $interp $R -G$grdfile -N127.5 -V \n";
+ print CSH "grdsample $grdfile -G$grdfile.1 $interp -F -V\n";
+ print CSH "grdimage $grdfile.1 $JM $R -Cgrd.cpt $B -K -V -P > $ps_file\n";
+
+ # draws grid points
+ print CSH "awk '{print \$0}' $file.xyz | psxy -J -R -Sc0.01 -Cgrd.cpt -V -K -O -P >> $ps_file \n";
+
+ # river, states, coast
+ #print CSH "pscoast $JM $R -W4 -Na -Dh -K -O -P -V >> $ps_file \n";
+
+ # coast only
+ print CSH "pscoast $JM $R -W1 -Dl -A10000 -K -O -P -V >> $ps_file \n";
+
+ # color scale
+ print CSH "psscale -D3/-0.5/3/0.2h -Ba50:'': -Cgrd.cpt -K -O -V -P >> $ps_file\n";
+
+ # base map
+ print CSH "psbasemap -R -J -Ba90/a30:.'':WeSn -O -P -V >> $ps_file\n";
+
+ # remove temporary data file
+ print CSH "rm -f $file.xyz \n";
+
+ # removes temporary images
+
+ print CSH "echo \n";
+ print CSH "echo 'plotted: $file.ps' \n";
+ print CSH "echo \n";
+
+}
+close(CSH);
+
+print "\nplotting... \n\n";
+
+# executes script
+system("csh -f plot_movie.csh");
+
+# cleanup
+system("rm -f plot_movie.csh");
+system("rm -f $grdfile $grdfile.1 grd.cpt");
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary_PNG.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary_PNG.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary_PNG.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,258 @@
+#!/usr/bin/perl
+#
+# reads in binary files produced from xcreate_movie_GMT_global
+# and creates png files with transparency
+#
+# uses segmented M-file to plot with psxy
+#
+
+use Getopt::Std;
+use POSIX;
+
+sub Usage {
+ print STDERR <<EOF;
+
+Usage: plot_movie_GMT_binary_PNG.pl file_name
+
+ ex. ./plot_movie_GMT_binary_PNG.pl OUTPUT_FILES/bin_movie_*.d
+
+EOF
+exit(1)
+}
+
+if (!getopts('l:L:cdts')) {die('Check input arguments\n');}
+ at ARGV > 0 or Usage();
+
+
+#######################################################
+## PARAMETERS
+
+# point locations
+$xy_file = "OUTPUT_FILES/bin_movie.xy";
+
+# specfem3D Par_file settings
+$nex = 160;
+$nproc = 5;
+$nchunks = 6;
+
+# non-linear scaling
+$power_scaling = 0.5;
+
+# global region
+$R = "-Rd";
+
+#plate carré projection
+$JM = "-JQ0/0/15";
+
+# color tables
+$colorcpt = "blue_white_red.cpt";
+$maskcpt = "gray_pyramid_inv.cpt";
+
+#######################################################
+
+# verbosity
+$verbose = ""; # "-V";
+# grid
+$grdfile = "movie.grd";
+# annotation
+$B = " -B10/10wesn ";
+
+
+print "Processing locations: $xy_file\n";
+
+# reads in locations (binary data)
+open FILE, "$xy_file" or die $!;
+binmode FILE;
+
+ at lines= () ;
+$line="";
+$is_ok = 1;
+$count = 0;
+while ( $is_ok != 0) {
+ read FILE, $junk, 4;
+
+ $n1 = read FILE, $data1, 4;
+ if( $n1 != 0 ){
+ ($lon) = unpack( "f",$data1);
+ }
+ $n2 = read FILE, $data2, 4;
+ if( $n2 != 0 ){
+ ($lat) = unpack( "f",$data2);
+ }
+ read FILE, $junk, 4;
+
+ #print "$n1 $n2 bytes read: lon=$lon \t \t lat=$lat\n";
+
+ if( $n1 != 0 && $n2 != 0 ){
+ $line = "$lon $lat \n";
+ push(@lines, $line);
+ $is_ok = 1;
+ }
+ else{ $is_ok = 0;}
+
+ $count++;
+ #if( $count == 8 ) {die("end");}
+}
+$nlines = @lines;
+close(FILE);
+print " number of lines: $nlines\n\n";
+
+
+open(CSH,">plot_movie.csh");
+print CSH "gmtset BASEMAP_TYPE plain ANOT_FONT_SIZE 9 HEADER_FONT_SIZE 15\n";
+
+foreach $file (@ARGV) {
+
+ if (not -f $file) {die("No $file\n");}
+
+ print "Processing frame $file...\n";
+
+ # reads displacement file (binary data)
+ open FILE, "$file" or die $!;
+ binmode FILE;
+
+ @lines_f= () ;
+ $line="";
+ $is_ok = 1;
+ $min = 1.e30;
+ $max = -1.e30;
+ while ( $is_ok != 0) {
+ read FILE, $junk, 4;
+
+ $n1 = read FILE, $data1, 4;
+ if( $n1 != 0 ){
+ ($val) = unpack( "f",$data1);
+ }
+
+ read FILE, $junk, 4;
+
+ if( $power_scaling > 0 ) {
+ if( $val > 0 ){ $val = $val**$power_scaling;
+ }else{
+ $val = - abs($val)**$power_scaling;
+ }
+
+ }
+
+ #print "$n1 bytes read: value=$val \n";
+
+ if( $n1 != 0 ){
+ $line = "$val \n";
+ push(@lines_f, $line);
+
+ # determines min/max of displacements
+ if( $val < $min) {$min = $val;}
+ if( $val > $max) {$max = $val;}
+
+ $is_ok = 1;
+ }
+ else{ $is_ok = 0;}
+ }
+ $nlines_f = @lines_f;
+ close(FILE);
+
+ # restore gzipped file
+ if( $gzipped == 1 ) {system("mv $filegz.org $filegz");}
+
+ if ($nlines_f != $nlines) {die("number of lines differ\n");}
+
+
+ # transforms displacements to range [0,255] for colors
+ if( abs($min) > abs($max) ){$max = abs($min);}
+ open FILE, ">$file.xyz" or die $!;
+
+ @elem_corners = ();
+ @elem_val = ();
+ for($i=0;$i<$nlines;$i++){
+ # scale between 0,1
+ $val = ($lines_f[$i] + $max)/(2.0*$max);
+ # scale between 0, 255
+ $val = $val * 255.0;
+
+ # prints value together with coordinates
+ $coord = $lines[$i];
+ chomp($coord);
+
+ # calculates a nice rectangle size
+ ($lon,$lat) = split(" ",$coord);
+ $rect_length = abs($lat) / 90. ;
+ $rect_length = 0.03 + ($rect_length**2) * 0.1;
+ $rect_height = 0.03 + ($rect_length**2) * 0.005;
+
+ # adds point
+ print FILE "$coord $val $rect_length $rect_height \n";
+
+ # stores values in arrays
+ push(@elem_val, $val );
+ $line = "$coord $val ";
+ push(@elem_corners, $line);
+ }
+ close(FILE);
+
+
+ # specfem3D output for MOVIE_COARSE
+ $nex_per_proc = $nex / $nproc ;
+ $total = $nproc * $nex_per_proc * $nproc * $nex_per_proc * $nchunks;
+ if( $total != $nlines ){ die("error nex/proc $nlines $total");}
+
+ # writes out segment file
+ open MFILE, ">$file.M.xyz" or die $!;
+ for($n=0;$n<$nproc*$nproc*$nchunks;$n++){
+ for($m=0;$m<$nex_per_proc-1;$m++){
+ for ($k=0;$k<$nex_per_proc-1;$k++){
+ # global array index
+ $i = $k + $m*$nex_per_proc + $n*$nex_per_proc*$nex_per_proc;
+ $val = $elem_val[$i];
+ # adds element
+ print MFILE "> -Z$val -W- \n";
+ print MFILE "$elem_corners[$i] \n";
+ print MFILE "$elem_corners[$i+1] \n";
+ print MFILE "$elem_corners[$i+$nex_per_proc+1] \n";
+ print MFILE "$elem_corners[$i+$nex_per_proc] \n";
+ }
+ }
+ }
+ close(MFILE);
+
+ $ps_file = "$file.ps";
+
+ # start ps-file
+ print CSH "psxy $file.xyz $JM $R $B -Sr -C$colorcpt -K -P $verbose > $ps_file\n";
+ print CSH "psxy $file.M.xyz $JM $R $B -M -L -N -C$colorcpt -P -O $verbose >> $ps_file\n";
+ # end ps-file
+
+ # start ps-file mask
+ print CSH "psbasemap $JM $R $B -G0 -P $verbose -K > $ps_file.mask\n";
+ print CSH "psxy $file.xyz $JM $R $B -Sr -C$maskcpt -P -K -O $verbose >> $ps_file.mask\n";
+ print CSH "psxy $file.M.xyz $JM $R $B -M -L -N -C$maskcpt -P -O $verbose >> $ps_file.mask\n";
+ # end ps-file mask
+
+ # convert to png
+ print CSH "convert -crop 1080x540+6+6 $ps_file $file.disp.png\n";
+ print CSH "convert -crop 1080x540+6+6 $ps_file.mask $file.mask.png\n";
+
+ # creates file with transparency (opacity)
+ print CSH "composite -compose CopyOpacity $file.mask.png $file.disp.png $file.png\n";
+
+ # remove temporary data file
+ print CSH "rm -f $file.xyz $file.M.xyz\n";
+
+ # removes temporary images
+ print CSH "rm -f $ps_file $ps_file.mask \n";
+ print CSH "rm -f $file.mask.png $file.disp.png \n";
+
+ print CSH "echo \n";
+ print CSH "echo 'plotted: $file.png' \n";
+ print CSH "echo \n";
+
+}
+close(CSH);
+
+print "\nplotting... \n\n";
+
+system("csh -f plot_movie.csh");
+
+system("rm -f plot_movie.csh");
+system("rm -f $grdfile $grdfile.1");
+
+
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary_PNG.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary_gunzipped_PNG.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary_gunzipped_PNG.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary_gunzipped_PNG.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,279 @@
+#!/usr/bin/perl
+#
+# reads in binary files (gzipped) produced from xcreate_movie_GMT_global
+# and creates png files with transparency
+#
+# uses segmented M-file to plot with psxy
+#
+
+use Getopt::Std;
+use POSIX;
+
+sub Usage {
+ print STDERR <<EOF;
+
+Usage: plot_movie_GMT_binary_gunzipped_PNG.pl file_name
+
+ ex. ./plot_movie_GMT_binary_gunzipped_PNG.pl OUTPUT_FILES/bin_movie_*.d.gz
+
+EOF
+exit(1)
+}
+
+if (!getopts('l:L:cdts')) {die('Check input arguments\n');}
+ at ARGV > 0 or Usage();
+
+
+#######################################################
+## PARAMETERS
+
+# gunzipped files (ending .gz)
+$gzipped = 1;
+
+# point locations
+$xy_file = "OUTPUT_FILES/bin_movie.xy";
+
+# specfem3D Par_file settings
+$nex = 160;
+$nproc = 5;
+$nchunks = 6;
+
+# non-linear scaling
+$power_scaling = 0.5;
+
+# global region
+$R = "-Rd";
+
+#plate carré projection
+$JM = "-JQ0/0/15";
+
+# color tables
+$colorcpt = "blue_white_red.cpt";
+$maskcpt = "gray_pyramid_inv.cpt";
+
+#######################################################
+
+# verbosity
+$verbose = ""; # "-V";
+# grid
+$grdfile = "movie.grd";
+# annotation
+$B = " -B10/10wesn ";
+
+
+# gunzips location file
+if( $gzipped == 1 ){
+ system("cp $xy_file.gz $xy_file.gz.org");
+ system("gunzip -f $xy_file.gz");
+}
+
+print "Processing locations: $xy_file\n";
+
+# reads in locations (binary data)
+open FILE, "$xy_file" or die $!;
+binmode FILE;
+
+ at lines= () ;
+$line="";
+$is_ok = 1;
+$count = 0;
+while ( $is_ok != 0) {
+ read FILE, $junk, 4;
+
+ $n1 = read FILE, $data1, 4;
+ if( $n1 != 0 ){
+ ($lon) = unpack( "f",$data1);
+ }
+ $n2 = read FILE, $data2, 4;
+ if( $n2 != 0 ){
+ ($lat) = unpack( "f",$data2);
+ }
+ read FILE, $junk, 4;
+
+ #print "$n1 $n2 bytes read: lon=$lon \t \t lat=$lat\n";
+
+ if( $n1 != 0 && $n2 != 0 ){
+ $line = "$lon $lat \n";
+ push(@lines, $line);
+ $is_ok = 1;
+ }
+ else{ $is_ok = 0;}
+
+ $count++;
+ #if( $count == 8 ) {die("end");}
+}
+$nlines = @lines;
+close(FILE);
+print " number of lines: $nlines\n\n";
+
+# restore gzipped file
+if( $gzipped == 1 ) {system("mv $xy_file.gz.org $xy_file.gz");}
+
+open(CSH,">plot_movie.csh");
+print CSH "gmtset BASEMAP_TYPE plain ANOT_FONT_SIZE 9 HEADER_FONT_SIZE 15\n";
+
+
+foreach $file (@ARGV) {
+
+ if (not -f $file) {die("No $file\n");}
+
+ print "Processing frame $file...\n";
+
+ # gunzips data file
+ if( $gzipped == 1 ){
+ $filegz = $file;
+ $file = substr($file,0,length($filegz)-3);
+ system("cp $filegz $filegz.org");
+ system("gunzip -f $filegz");
+ }
+ print " $file\n";
+
+ # reads displacement file (binary data)
+ open FILE, "$file" or die $!;
+ binmode FILE;
+
+ @lines_f= () ;
+ $line="";
+ $is_ok = 1;
+ $min = 1.e30;
+ $max = -1.e30;
+ while ( $is_ok != 0) {
+ read FILE, $junk, 4;
+
+ $n1 = read FILE, $data1, 4;
+ if( $n1 != 0 ){
+ ($val) = unpack( "f",$data1);
+ }
+
+ read FILE, $junk, 4;
+
+ if( $power_scaling > 0 ) {
+ if( $val > 0 ){ $val = $val**$power_scaling;
+ }else{
+ $val = - abs($val)**$power_scaling;
+ }
+
+ }
+
+ #print "$n1 bytes read: value=$val \n";
+
+ if( $n1 != 0 ){
+ $line = "$val \n";
+ push(@lines_f, $line);
+
+ # determines min/max of displacements
+ if( $val < $min) {$min = $val;}
+ if( $val > $max) {$max = $val;}
+
+ $is_ok = 1;
+ }
+ else{ $is_ok = 0;}
+ }
+ $nlines_f = @lines_f;
+ close(FILE);
+
+ # restore gzipped file
+ if( $gzipped == 1 ) {system("mv $filegz.org $filegz");}
+
+ if ($nlines_f != $nlines) {die("number of lines differ\n");}
+
+
+ # transforms displacements to range [0,255] for colors
+ if( abs($min) > abs($max) ){$max = abs($min);}
+ open FILE, ">$file.xyz" or die $!;
+
+ @elem_corners = ();
+ @elem_val = ();
+ for($i=0;$i<$nlines;$i++){
+ # scale between 0,1
+ $val = ($lines_f[$i] + $max)/(2.0*$max);
+ # scale between 0, 255
+ $val = $val * 255.0;
+
+ # prints value together with coordinates
+ $coord = $lines[$i];
+ chomp($coord);
+
+ # calculates a nice rectangle size
+ ($lon,$lat) = split(" ",$coord);
+ $rect_length = abs($lat) / 90. ;
+ $rect_length = 0.03 + ($rect_length**2) * 0.1;
+ $rect_height = 0.03 + ($rect_length**2) * 0.005;
+
+ # adds point
+ print FILE "$coord $val $rect_length $rect_height \n";
+
+ # stores values in arrays
+ push(@elem_val, $val );
+ $line = "$coord $val ";
+ push(@elem_corners, $line);
+ }
+ close(FILE);
+
+
+ # specfem3D output for MOVIE_COARSE
+ $nex_per_proc = $nex / $nproc ;
+ $total = $nproc * $nex_per_proc * $nproc * $nex_per_proc * $nchunks;
+ if( $total != $nlines ){ die("error nex/proc $nlines $total");}
+
+ # writes out segment file
+ open MFILE, ">$file.M.xyz" or die $!;
+ for($n=0;$n<$nproc*$nproc*$nchunks;$n++){
+ for($m=0;$m<$nex_per_proc-1;$m++){
+ for ($k=0;$k<$nex_per_proc-1;$k++){
+ # global array index
+ $i = $k + $m*$nex_per_proc + $n*$nex_per_proc*$nex_per_proc;
+ $val = $elem_val[$i];
+ # adds element
+ print MFILE "> -Z$val -W- \n";
+ print MFILE "$elem_corners[$i] \n";
+ print MFILE "$elem_corners[$i+1] \n";
+ print MFILE "$elem_corners[$i+$nex_per_proc+1] \n";
+ print MFILE "$elem_corners[$i+$nex_per_proc] \n";
+ }
+ }
+ }
+ close(MFILE);
+
+ $ps_file = "$file.ps";
+
+ # start ps-file
+ print CSH "psxy $file.xyz $JM $R $B -Sr -C$colorcpt -K -P $verbose > $ps_file\n";
+ print CSH "psxy $file.M.xyz $JM $R $B -M -L -N -C$colorcpt -P -O $verbose >> $ps_file\n";
+ # end ps-file
+
+ # start ps-file mask
+ print CSH "psbasemap $JM $R $B -G0 -P $verbose -K > $ps_file.mask\n";
+ print CSH "psxy $file.xyz $JM $R $B -Sr -C$maskcpt -P -K -O $verbose >> $ps_file.mask\n";
+ print CSH "psxy $file.M.xyz $JM $R $B -M -L -N -C$maskcpt -P -O $verbose >> $ps_file.mask\n";
+ # end ps-file mask
+
+ # convert to png
+ print CSH "convert -crop 1080x540+6+6 $ps_file $file.disp.png\n";
+ print CSH "convert -crop 1080x540+6+6 $ps_file.mask $file.mask.png\n";
+
+ # creates file with transparency (opacity)
+ print CSH "composite -compose CopyOpacity $file.mask.png $file.disp.png $file.png\n";
+
+ # remove temporary data file
+ print CSH "rm -f $file.xyz $file.M.xyz\n";
+
+ # removes temporary images
+ print CSH "rm -f $ps_file $ps_file.mask \n";
+ print CSH "rm -f $file.mask.png $file.disp.png \n";
+
+ print CSH "echo \n";
+ print CSH "echo 'plotted: $file.png' \n";
+ print CSH "echo \n";
+
+}
+close(CSH);
+
+print "\nplotting... \n\n";
+
+system("csh -f plot_movie.csh");
+
+system("rm -f plot_movie.csh");
+system("rm -f $grdfile $grdfile.1");
+
+
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_movie_GMT_binary_gunzipped_PNG.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_seismos.gmt.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_seismos.gmt.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_seismos.gmt.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,99 @@
+#!/usr/bin/perl -w
+#
+# usage:
+#
+# ./plot_seismos.gmt.pl OUTPUT_FILES/Y*.LHZ.semd
+#
+# GMT package must be installed...
+use POSIX;
+use Getopt::Std;
+
+
+#---------------------------------------------------------------------------
+## PARAMETERS
+
+# min/max range scaling
+$SCALE = 10. ;
+
+#---------------------------------------------------------------------------
+
+sub Usage{
+ print STDERR <<END;
+
+Usage: e.g. ./plot_seismos.gmt.pl OUTPUT_FILES/Y*.LHZ.semd
+
+END
+exit(1);
+}
+
+ at ARGV > 0 or Usage();
+
+# find start and end time and a reasonable step
+$narg = @ARGV;
+$mid = int($narg/2.0);
+$trace = $ARGV[$mid];
+#print "trace: $trace\n";
+
+# set region
+$minmax=`minmax $trace -C `;
+chomp($minmax);
+
+($t_start,$t_end,$min,$max) = split(" ",$minmax);
+
+$min = $SCALE*$min;
+$max = $SCALE*$max;
+
+$region="$t_start/$t_end/$min/$max";
+
+#print "region: $region\n";
+
+$proj="X6/1.5";
+$color="0/0/200";
+
+open(GMT,">plot_gmtseismos.sh");
+print GMT "gmtset PAPER_MEDIA letter MEASURE_UNIT inch HEADER_FONT_SIZE 14p LABEL_FONT_SIZE 16p\n";
+
+
+# set output filename
+$out="seis.ps";
+print GMT "psbasemap -R$region -J$proj -B::.:'Time (s)':/S -K -P -Y1 > $out \n";
+
+
+#################################
+# plot seismograms
+#################################
+
+$offset = 8./$narg;
+
+$counter=0;
+$xoff = 0;
+$yoff = 0;
+foreach $file (@ARGV) {
+
+ $counter++;
+
+ $xoff=0;
+ $yoff=$offset;
+
+ # plots
+ print GMT "psxy $file -R$region -J$proj -W2/$color -X$xoff -Y$yoff -O -K >> $out \n";
+
+}
+
+# finishes plot with annotations
+#print GMT "pstext -R$region -J$proj -N -O -K << END >> $out \n";
+#print GMT "$t_start $max 12 0 0 LT Seismograms \n";
+#print GMT "END \n";
+
+# end ps-file
+print GMT "psxy -J -R -O -P -V <<EOF >>$out\nEOF\n";
+
+print GMT "convert $out seis.pdf \n";
+print GMT "rm -f $out\n";
+
+close(GMT);
+
+system("sh plot_gmtseismos.sh");
+system("rm -f plot_gmtseismos.sh");
+
+print "plotted to: seis.pdf \n";
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/plot_seismos.gmt.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/readme.txt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/readme.txt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GMT/readme.txt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,65 @@
+--------------------------------
+readme
+--------------------------------
+
+GMT, the Generic Mapping Tools
+http://www.soest.hawaii.edu/GMT/
+
+
+
+- procedure to make a GMT image:
+
+1. run specfem with the movie options (see Par_file):
+
+ MOVIE_SURFACE = .true.
+ MOVIE_COARSE = .false.
+
+ and adjust the time steps NSTEP_BETWEEN_FRAMES
+
+ this creates binary files in directory OUTPUT_FILES/ like: moviedata000100,...
+
+
+now, you have basically two options:
+
+
+2.A) convert binary files to GMT-files:
+
+ in SPECFEM3D_GLOBE: > make xcreate_movie_AVS_DX
+
+ run it > ./xcreate_movie_AVS_DX
+
+ choose option 4 for individual files
+
+ outputs file like: OUTPUT_FILES/gmt_movie_000100.xyz
+
+
+ - render gif files using GMT:
+
+ > ./plot_gmt_movie_file.pl OUTPUT_FILES/gmt_movie*.xyz
+
+
+
+2.B) convert binary files to GMT-files:
+
+ in SPECFEM3D_GLOBE: > make xcreate_movie_GMT_global
+
+ run it > ./xcreate_movie_GMT_global
+
+ choose either option for ascii (F) or binary (T)
+ to create individual files
+
+
+ - render ascii files to create ps files using GMT:
+
+ > ./plot_movie_GMT_ascii.pl OUTPUT_FILES/ascii_movie_00***.d
+
+
+ - render binary files to create PNG files using GMT:
+
+ > ./plot_movie_GMT_binary.pl OUTPUT_FILES/bin_movie_00***.d
+
+
+please, change the rendering scripts plot_movie_GMT_ascii.pl, etc.
+according to your needs.
+
+note: these scripts make use of commands from ImageMagick (http://www.imagemagick.org)
\ No newline at end of file
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/PAS.TS.LHZ.gnu
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/PAS.TS.LHZ.gnu (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/PAS.TS.LHZ.gnu 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,8 @@
+#!/usr/local/bin/gnuplot -persist
+#
+#
+
+set xlabel "time (s)"
+set ylabel "displacement (m)"
+
+plot 'OUTPUT_FILES/PAS.TS.LHZ.sem.ascii' w l
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/display_PREM_model/display_prem_model.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/display_PREM_model/display_prem_model.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/display_PREM_model/display_prem_model.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,148 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 3 . 2
+! --------------------------------------------------
+!
+! Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory - California Institute of Technology
+! (c) California Institute of Technology July 2002
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+ program prem_iso
+
+ implicit none
+
+ include "../../../constants.h"
+
+! PREM
+ double precision, parameter :: RMOHO = 6346600.d0
+ double precision, parameter :: R220 = 6151000.d0
+ double precision, parameter :: R400 = 5971000.d0
+ double precision, parameter :: R600 = 5771000.d0
+ double precision, parameter :: R670 = 5701000.d0
+ double precision, parameter :: R771 = 5600000.d0
+ double precision, parameter :: RTOPDDOUBLEPRIME = 3630000.d0
+ double precision, parameter :: RCMB = 3480000.d0
+ double precision, parameter :: RICB = 1221000.d0
+
+! values common to PREM and IASP91
+ double precision, parameter :: ROCEAN = 6368000.d0
+ double precision, parameter :: RMIDDLE_CRUST = 6356000.d0
+ double precision, parameter :: R80 = 6291000.d0
+
+ integer i
+
+ double precision r
+ double precision x,rho,vp,vs
+
+! compute real physical radius in meters
+ do i=1,1000
+
+ x = dble(i)/1000.d0
+
+ r = x * R_EARTH
+
+!
+! PREM
+!
+!--- inner core
+!
+ if(r >= 0.d0 .and. r <= RICB) then
+ rho=13.0885d0-8.8381d0*x*x
+ vp=11.2622d0-6.3640d0*x*x
+ vs=3.6678d0-4.4475d0*x*x
+!
+!--- outer core
+!
+ else if(r > RICB .and. r <= RCMB) then
+ rho=12.5815d0-1.2638d0*x-3.6426d0*x*x-5.5281d0*x*x*x
+ vp=11.0487d0-4.0362d0*x+4.8023d0*x*x-13.5732d0*x*x*x
+ vs=0.0d0
+!
+!--- D" at the base of the mantle
+!
+ else if(r > RCMB .and. r <= RTOPDDOUBLEPRIME) then
+ rho=7.9565d0-6.4761d0*x+5.5283d0*x*x-3.0807d0*x*x*x
+ vp=15.3891d0-5.3181d0*x+5.5242d0*x*x-2.5514d0*x*x*x
+ vs=6.9254d0+1.4672d0*x-2.0834d0*x*x+0.9783d0*x*x*x
+!
+!--- mantle: from top of D" to d670
+!
+ else if(r > RTOPDDOUBLEPRIME .and. r <= R771) then
+ rho=7.9565d0-6.4761d0*x+5.5283d0*x*x-3.0807d0*x*x*x
+ vp=24.9520d0-40.4673d0*x+51.4832d0*x*x-26.6419d0*x*x*x
+ vs=11.1671d0-13.7818d0*x+17.4575d0*x*x-9.2777d0*x*x*x
+ else if(r > R771 .and. r <= R670) then
+ rho=7.9565d0-6.4761d0*x+5.5283d0*x*x-3.0807d0*x*x*x
+ vp=29.2766d0-23.6027d0*x+5.5242d0*x*x-2.5514d0*x*x*x
+ vs=22.3459d0-17.2473d0*x-2.0834d0*x*x+0.9783d0*x*x*x
+!
+!--- mantle: above d670
+!
+ else if(r > R670 .and. r <= R600) then
+ rho=5.3197d0-1.4836d0*x
+ vp=19.0957d0-9.8672d0*x
+ vs=9.9839d0-4.9324d0*x
+ else if(r > R600 .and. r <= R400) then
+ rho=11.2494d0-8.0298d0*x
+ vp=39.7027d0-32.6166d0*x
+ vs=22.3512d0-18.5856d0*x
+ else if(r > R400 .and. r <= R220) then
+ rho=7.1089d0-3.8045d0*x
+ vp=20.3926d0-12.2569d0*x
+ vs=8.9496d0-4.4597d0*x
+ else if(r > R220 .and. r <= R80) then
+ rho=2.6910d0+0.6924d0*x
+ vp=4.1875d0+3.9382d0*x
+ vs=2.1519d0+2.3481d0*x
+ else
+! use PREM crust
+ if(r > R80 .and. r <= RMOHO) then
+ rho=2.6910d0+0.6924d0*x
+ vp=4.1875d0+3.9382d0*x
+ vs=2.1519d0+2.3481d0*x
+ else if(r > RMOHO .and. r <= RMIDDLE_CRUST) then
+ rho=2.9d0
+ vp=6.8d0
+ vs=3.9d0
+ else if(r > RMIDDLE_CRUST .and. r <= ROCEAN) then
+ rho=2.6d0
+ vp=5.8d0
+ vs=3.2d0
+! for density profile for gravity, we do not check that r <= R_EARTH
+ else if(r > ROCEAN) then
+ rho=2.6d0
+ vp=5.8d0
+ vs=3.2d0
+ endif
+ endif
+
+ rho=rho*1000.0d0
+ vp=vp*1000.0d0
+ vs=vs*1000.0d0
+
+ print *,sngl(r/1000.d0),sngl(vp),sngl(vs),sngl(rho)
+
+ enddo
+
+ print *
+ print *,'use gnuplot to display radius,vp,vs,rho file'
+ print *
+
+ end program prem_iso
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/display_PREM_model/plot_prem.gnu
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/display_PREM_model/plot_prem.gnu (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/display_PREM_model/plot_prem.gnu 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,9 @@
+
+set term x11
+
+plot "prem.dat" us 1:2 t 'vp' w l 1, "prem.dat" us 1:3 t 'vs' w l 2
+
+#########plot "prem.dat" us 1:2 t 'vp' w l 1, "prem.dat" us 1:3 t 'vs' w l 2, "prem.dat" us 1:4 t 'rho' w l 3
+
+pause -1 "hit key"
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/draw_regular_2D_GLL_element_gnuplot.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/draw_regular_2D_GLL_element_gnuplot.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/draw_regular_2D_GLL_element_gnuplot.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,650 @@
+
+ program draw_regular_GLL_element
+
+! for articles or presentations, draw regular 2D GLL element using Gnuplot
+! Author: Dimitri Komatitsch
+
+ implicit none
+
+! number of spatial dimensions
+ integer, parameter :: NDIM = 2
+
+! number of GLL points
+ integer, parameter :: NGLLX = 5
+ integer, parameter :: NGLLY = NGLLX
+
+! for the Gauss-Lobatto-Legendre points and weights
+ double precision, parameter :: GAUSSALPHA = 0.d0,GAUSSBETA = 0.d0
+
+ double precision, dimension(NDIM,NGLLX,NGLLY) :: coord
+
+! Gauss-Lobatto-Legendre points and weights of integration
+ double precision, dimension(NGLLX) :: xigll,wxgll
+ double precision, dimension(NGLLY) :: yigll,wygll
+
+ integer ix,iy
+
+! set up coordinates of the Gauss-Lobatto-Legendre points
+ call zwgljd(xigll,wxgll,NGLLX,GAUSSALPHA,GAUSSBETA)
+ call zwgljd(yigll,wygll,NGLLY,GAUSSALPHA,GAUSSBETA)
+
+! define the GLL coordinates of the reference element
+ do iy = 1,NGLLY
+ do ix = 1,NGLLX
+ coord(1,ix,iy) = xigll(ix)
+ coord(2,ix,iy) = yigll(iy)
+ enddo
+ enddo
+
+!
+!---- print the GLL mesh in a Gnuplot file
+!
+
+ write(*,*)
+ write(*,*) 'Generating gnuplot mesh...'
+ write(*,*)
+
+ open(unit=20,file='gllfullmesh.gnu',status='unknown')
+ open(unit=21,file='gllmeshedges.gnu',status='unknown')
+
+!
+!---- plot the lines in the xi-direction
+!
+ do iy = 1,NGLLY
+ do ix = 1,NGLLX-1
+
+ write(20,*) sngl(coord(1,ix,iy)),sngl(coord(2,ix,iy))
+ write(20,*) sngl(coord(1,ix+1,iy)),sngl(coord(2,ix+1,iy))
+ write(20,"('')")
+
+ if(iy == 1 .or. iy == NGLLY) then
+ write(21,*) sngl(coord(1,ix,iy)),sngl(coord(2,ix,iy))
+ write(21,*) sngl(coord(1,ix+1,iy)),sngl(coord(2,ix+1,iy))
+ write(21,"('')")
+ endif
+
+ enddo
+ enddo
+
+!
+!---- plot the lines in the eta-direction
+!
+ do ix = 1,NGLLX
+ do iy = 1,NGLLY-1
+
+ write(20,*) sngl(coord(1,ix,iy)),sngl(coord(2,ix,iy))
+ write(20,*) sngl(coord(1,ix,iy+1)),sngl(coord(2,ix,iy+1))
+ write(20,"('')")
+
+ if(ix == 1 .or. ix == NGLLX) then
+ write(21,*) sngl(coord(1,ix,iy)),sngl(coord(2,ix,iy))
+ write(21,*) sngl(coord(1,ix,iy+1)),sngl(coord(2,ix,iy+1))
+ write(21,"('')")
+ endif
+
+ enddo
+ enddo
+
+ close(20)
+ close(21)
+
+!
+!---- generate the command file for Gnuplot
+!
+ open(unit=20,file='plotall.gnu',status='unknown')
+
+! write postscript script
+ write(20,*) 'set term postscript eps monochrome dashed "Helvetica" 22'
+ write(20,*) 'set output "grid_GLL.eps"'
+ write(20,*) 'set size square'
+ write(20,*) 'set noborder'
+ write(20,*) 'set nogrid'
+ write(20,*) 'set nozeroaxis'
+ write(20,*) 'set noxtics'
+ write(20,*) 'set noytics'
+ write(20,*) 'plot "gllfullmesh.gnu" title '''' w linesp 2 4, "gllmeshedges.gnu" title '''' w l 1'
+
+! write X11 script
+! write(20,*) 'set term x11'
+! write(20,*) 'set xlabel "X"'
+! write(20,*) 'set ylabel "Y"'
+! write(20,*) 'set title "Gauss-Lobatto-Legendre Mesh"'
+! write(20,*) 'plot "gllfullmesh.gnu" title '''' w l 2, "gllmeshedges.gnu" title '''' w linesp 1 3'
+! write(20,*) 'pause -1 "Hit any key"'
+
+ close(20)
+
+ end program draw_regular_GLL_element
+
+!*************************************************************
+!*************************************************************
+!*************************************************************
+
+!=======================================================================
+!
+! Library to compute the Gauss-Lobatto-Legendre points and weights
+! Based on Gauss-Lobatto routines from M.I.T.
+! Department of Mechanical Engineering
+!
+!=======================================================================
+
+ double precision function endw1(n,alpha,beta)
+
+ implicit none
+
+ integer n
+ double precision alpha,beta
+
+ double precision, parameter :: zero=0.d0,one=1.d0,two=2.d0,three=3.d0,four=4.d0
+ double precision apb,f1,fint1,fint2,f2,di,abn,abnn,a1,a2,a3,f3
+ double precision, external :: gammaf
+ integer i
+
+ f3 = zero
+ apb = alpha+beta
+ if (n == 0) then
+ endw1 = zero
+ return
+ endif
+ f1 = gammaf(alpha+two)*gammaf(beta+one)/gammaf(apb+three)
+ f1 = f1*(apb+two)*two**(apb+two)/two
+ if (n == 1) then
+ endw1 = f1
+ return
+ endif
+ fint1 = gammaf(alpha+two)*gammaf(beta+one)/gammaf(apb+three)
+ fint1 = fint1*two**(apb+two)
+ fint2 = gammaf(alpha+two)*gammaf(beta+two)/gammaf(apb+four)
+ fint2 = fint2*two**(apb+three)
+ f2 = (-two*(beta+two)*fint1 + (apb+four)*fint2) * (apb+three)/four
+ if (n == 2) then
+ endw1 = f2
+ return
+ endif
+ do i=3,n
+ di = dble(i-1)
+ abn = alpha+beta+di
+ abnn = abn+di
+ a1 = -(two*(di+alpha)*(di+beta))/(abn*abnn*(abnn+one))
+ a2 = (two*(alpha-beta))/(abnn*(abnn+two))
+ a3 = (two*(abn+one))/((abnn+two)*(abnn+one))
+ f3 = -(a2*f2+a1*f1)/a3
+ f1 = f2
+ f2 = f3
+ enddo
+ endw1 = f3
+
+ end function endw1
+
+!
+!=======================================================================
+!
+
+ double precision function endw2(n,alpha,beta)
+
+ implicit none
+
+ integer n
+ double precision alpha,beta
+
+ double precision, parameter :: zero=0.d0,one=1.d0,two=2.d0,three=3.d0,four=4.d0
+ double precision apb,f1,fint1,fint2,f2,di,abn,abnn,a1,a2,a3,f3
+ double precision, external :: gammaf
+ integer i
+
+ apb = alpha+beta
+ f3 = zero
+ if (n == 0) then
+ endw2 = zero
+ return
+ endif
+ f1 = gammaf(alpha+one)*gammaf(beta+two)/gammaf(apb+three)
+ f1 = f1*(apb+two)*two**(apb+two)/two
+ if (n == 1) then
+ endw2 = f1
+ return
+ endif
+ fint1 = gammaf(alpha+one)*gammaf(beta+two)/gammaf(apb+three)
+ fint1 = fint1*two**(apb+two)
+ fint2 = gammaf(alpha+two)*gammaf(beta+two)/gammaf(apb+four)
+ fint2 = fint2*two**(apb+three)
+ f2 = (two*(alpha+two)*fint1 - (apb+four)*fint2) * (apb+three)/four
+ if (n == 2) then
+ endw2 = f2
+ return
+ endif
+ do i=3,n
+ di = dble(i-1)
+ abn = alpha+beta+di
+ abnn = abn+di
+ a1 = -(two*(di+alpha)*(di+beta))/(abn*abnn*(abnn+one))
+ a2 = (two*(alpha-beta))/(abnn*(abnn+two))
+ a3 = (two*(abn+one))/((abnn+two)*(abnn+one))
+ f3 = -(a2*f2+a1*f1)/a3
+ f1 = f2
+ f2 = f3
+ enddo
+ endw2 = f3
+
+ end function endw2
+
+!
+!=======================================================================
+!
+
+ double precision function gammaf (x)
+
+ implicit none
+
+ double precision, parameter :: pi = 3.141592653589793d0
+
+ double precision x
+
+ double precision, parameter :: half=0.5d0,one=1.d0,two=2.d0
+
+ gammaf = one
+
+ if (x == -half) gammaf = -two*dsqrt(pi)
+ if (x == half) gammaf = dsqrt(pi)
+ if (x == one ) gammaf = one
+ if (x == two ) gammaf = one
+ if (x == 1.5d0) gammaf = dsqrt(pi)/2.d0
+ if (x == 2.5d0) gammaf = 1.5d0*dsqrt(pi)/2.d0
+ if (x == 3.5d0) gammaf = 2.5d0*1.5d0*dsqrt(pi)/2.d0
+ if (x == 3.d0 ) gammaf = 2.d0
+ if (x == 4.d0 ) gammaf = 6.d0
+ if (x == 5.d0 ) gammaf = 24.d0
+ if (x == 6.d0 ) gammaf = 120.d0
+
+ end function gammaf
+
+!
+!=====================================================================
+!
+
+ subroutine jacg (xjac,np,alpha,beta)
+
+!=======================================================================
+!
+! computes np Gauss points, which are the zeros of the
+! Jacobi polynomial with parameters alpha and beta
+!
+! .alpha = beta = 0.0 -> Legendre points
+! .alpha = beta = -0.5 -> Chebyshev points
+!
+!=======================================================================
+
+ implicit none
+
+ integer np
+ double precision alpha,beta
+ double precision xjac(np)
+
+ integer k,j,i,jmin,jm,n
+ double precision xlast,dth,x,x1,x2,recsum,delx,xmin,swap
+ double precision p,pd,pm1,pdm1,pm2,pdm2
+
+ integer, parameter :: K_MAX_ITER = 10
+ double precision, parameter :: zero = 0.d0, eps = 1.0d-12
+
+ pm1 = zero
+ pm2 = zero
+ pdm1 = zero
+ pdm2 = zero
+
+ xlast = 0.d0
+ n = np-1
+ dth = 4.d0*datan(1.d0)/(2.d0*dble(n)+2.d0)
+ p = 0.d0
+ pd = 0.d0
+ jmin = 0
+ do j=1,np
+ if(j == 1) then
+ x = dcos((2.d0*(dble(j)-1.d0)+1.d0)*dth)
+ else
+ x1 = dcos((2.d0*(dble(j)-1.d0)+1.d0)*dth)
+ x2 = xlast
+ x = (x1+x2)/2.d0
+ endif
+ do k=1,K_MAX_ITER
+ call jacobf (p,pd,pm1,pdm1,pm2,pdm2,np,alpha,beta,x)
+ recsum = 0.d0
+ jm = j-1
+ do i=1,jm
+ recsum = recsum+1.d0/(x-xjac(np-i+1))
+ enddo
+ delx = -p/(pd-recsum*p)
+ x = x+delx
+ if(abs(delx) < eps) goto 31
+ enddo
+ 31 continue
+ xjac(np-j+1) = x
+ xlast = x
+ enddo
+ do i=1,np
+ xmin = 2.d0
+ do j=i,np
+ if(xjac(j) < xmin) then
+ xmin = xjac(j)
+ jmin = j
+ endif
+ enddo
+ if(jmin /= i) then
+ swap = xjac(i)
+ xjac(i) = xjac(jmin)
+ xjac(jmin) = swap
+ endif
+ enddo
+
+ end subroutine jacg
+
+!
+!=====================================================================
+!
+
+ subroutine jacobf (poly,pder,polym1,pderm1,polym2,pderm2,n,alp,bet,x)
+
+!=======================================================================
+!
+! Computes the Jacobi polynomial of degree n and its derivative at x
+!
+!=======================================================================
+
+ implicit none
+
+ double precision poly,pder,polym1,pderm1,polym2,pderm2,alp,bet,x
+ integer n
+
+ double precision apb,polyl,pderl,dk,a1,a2,b3,a3,a4,polyn,pdern,psave,pdsave
+ integer k
+
+ apb = alp+bet
+ poly = 1.d0
+ pder = 0.d0
+ psave = 0.d0
+ pdsave = 0.d0
+
+ if (n == 0) return
+
+ polyl = poly
+ pderl = pder
+ poly = (alp-bet+(apb+2.d0)*x)/2.d0
+ pder = (apb+2.d0)/2.d0
+ if (n == 1) return
+
+ do k=2,n
+ dk = dble(k)
+ a1 = 2.d0*dk*(dk+apb)*(2.d0*dk+apb-2.d0)
+ a2 = (2.d0*dk+apb-1.d0)*(alp**2-bet**2)
+ b3 = (2.d0*dk+apb-2.d0)
+ a3 = b3*(b3+1.d0)*(b3+2.d0)
+ a4 = 2.d0*(dk+alp-1.d0)*(dk+bet-1.d0)*(2.d0*dk+apb)
+ polyn = ((a2+a3*x)*poly-a4*polyl)/a1
+ pdern = ((a2+a3*x)*pder-a4*pderl+a3*poly)/a1
+ psave = polyl
+ pdsave = pderl
+ polyl = poly
+ poly = polyn
+ pderl = pder
+ pder = pdern
+ enddo
+
+ polym1 = polyl
+ pderm1 = pderl
+ polym2 = psave
+ pderm2 = pdsave
+
+ end subroutine jacobf
+
+!
+!------------------------------------------------------------------------
+!
+
+ double precision FUNCTION PNDLEG (Z,N)
+
+!------------------------------------------------------------------------
+!
+! Compute the derivative of the Nth order Legendre polynomial at Z.
+! Based on the recursion formula for the Legendre polynomials.
+!
+!------------------------------------------------------------------------
+ implicit none
+
+ double precision z
+ integer n
+
+ double precision P1,P2,P1D,P2D,P3D,FK,P3
+ integer k
+
+ P1 = 1.d0
+ P2 = Z
+ P1D = 0.d0
+ P2D = 1.d0
+ P3D = 1.d0
+
+ do K = 1, N-1
+ FK = dble(K)
+ P3 = ((2.d0*FK+1.d0)*Z*P2 - FK*P1)/(FK+1.d0)
+ P3D = ((2.d0*FK+1.d0)*P2 + (2.d0*FK+1.d0)*Z*P2D - FK*P1D) / (FK+1.d0)
+ P1 = P2
+ P2 = P3
+ P1D = P2D
+ P2D = P3D
+ enddo
+
+ PNDLEG = P3D
+
+ end function pndleg
+
+!
+!------------------------------------------------------------------------
+!
+
+ double precision FUNCTION PNLEG (Z,N)
+
+!------------------------------------------------------------------------
+!
+! Compute the value of the Nth order Legendre polynomial at Z.
+! Based on the recursion formula for the Legendre polynomials.
+!
+!------------------------------------------------------------------------
+ implicit none
+
+ double precision z
+ integer n
+
+ double precision P1,P2,P3,FK
+ integer k
+
+ P1 = 1.d0
+ P2 = Z
+ P3 = P2
+
+ do K = 1, N-1
+ FK = dble(K)
+ P3 = ((2.d0*FK+1.d0)*Z*P2 - FK*P1)/(FK+1.d0)
+ P1 = P2
+ P2 = P3
+ enddo
+
+ PNLEG = P3
+
+ end function pnleg
+
+!
+!------------------------------------------------------------------------
+!
+
+ double precision function pnormj (n,alpha,beta)
+
+ implicit none
+
+ double precision alpha,beta
+ integer n
+
+ double precision one,two,dn,const,prod,dindx,frac
+ double precision, external :: gammaf
+ integer i
+
+ one = 1.d0
+ two = 2.d0
+ dn = dble(n)
+ const = alpha+beta+one
+
+ if (n <= 1) then
+ prod = gammaf(dn+alpha)*gammaf(dn+beta)
+ prod = prod/(gammaf(dn)*gammaf(dn+alpha+beta))
+ pnormj = prod * two**const/(two*dn+const)
+ return
+ endif
+
+ prod = gammaf(alpha+one)*gammaf(beta+one)
+ prod = prod/(two*(one+const)*gammaf(const+one))
+ prod = prod*(one+alpha)*(two+alpha)
+ prod = prod*(one+beta)*(two+beta)
+
+ do i=3,n
+ dindx = dble(i)
+ frac = (dindx+alpha)*(dindx+beta)/(dindx*(dindx+alpha+beta))
+ prod = prod*frac
+ enddo
+
+ pnormj = prod * two**const/(two*dn+const)
+
+ end function pnormj
+
+!
+!------------------------------------------------------------------------
+!
+
+ subroutine zwgjd(z,w,np,alpha,beta)
+
+!=======================================================================
+!
+! Z w g j d : Generate np Gauss-Jacobi points and weights
+! associated with Jacobi polynomial of degree n = np-1
+!
+! Note : Coefficients alpha and beta must be greater than -1.
+! ----
+!=======================================================================
+
+ implicit none
+
+ double precision, parameter :: zero=0.d0,one=1.d0,two=2.d0
+
+ integer np
+ double precision z(np),w(np)
+ double precision alpha,beta
+
+ integer n,np1,np2,i
+ double precision p,pd,pm1,pdm1,pm2,pdm2
+ double precision apb,dnp1,dnp2,fac1,fac2,fac3,fnorm,rcoef
+ double precision, external :: gammaf,pnormj
+
+ pd = zero
+ pm1 = zero
+ pm2 = zero
+ pdm1 = zero
+ pdm2 = zero
+
+ n = np-1
+ apb = alpha+beta
+ p = zero
+ pdm1 = zero
+
+ if (np <= 0) stop 'minimum number of Gauss points is 1'
+
+ if ((alpha <= -one) .or. (beta <= -one)) stop 'alpha and beta must be greater than -1'
+
+ if (np == 1) then
+ z(1) = (beta-alpha)/(apb+two)
+ w(1) = gammaf(alpha+one)*gammaf(beta+one)/gammaf(apb+two) * two**(apb+one)
+ return
+ endif
+
+ call jacg(z,np,alpha,beta)
+
+ np1 = n+1
+ np2 = n+2
+ dnp1 = dble(np1)
+ dnp2 = dble(np2)
+ fac1 = dnp1+alpha+beta+one
+ fac2 = fac1+dnp1
+ fac3 = fac2+one
+ fnorm = pnormj(np1,alpha,beta)
+ rcoef = (fnorm*fac2*fac3)/(two*fac1*dnp2)
+ do i=1,np
+ call jacobf(p,pd,pm1,pdm1,pm2,pdm2,np2,alpha,beta,z(i))
+ w(i) = -rcoef/(p*pdm1)
+ enddo
+
+ end subroutine zwgjd
+
+!
+!------------------------------------------------------------------------
+!
+
+ subroutine zwgljd(z,w,np,alpha,beta)
+
+!=======================================================================
+!
+! Z w g l j d : Generate np Gauss-Lobatto-Jacobi points and the
+! ----------- weights associated with Jacobi polynomials of degree
+! n = np-1.
+!
+! Note : alpha and beta coefficients must be greater than -1.
+! Legendre polynomials are special case of Jacobi polynomials
+! just by setting alpha and beta to 0.
+!
+!=======================================================================
+
+ implicit none
+
+ double precision, parameter :: zero=0.d0,one=1.d0,two=2.d0
+
+ integer np
+ double precision alpha,beta
+ double precision z(np), w(np)
+
+ integer n,nm1,i
+ double precision p,pd,pm1,pdm1,pm2,pdm2
+ double precision alpg,betg
+ double precision, external :: endw1,endw2
+
+ p = zero
+ pm1 = zero
+ pm2 = zero
+ pdm1 = zero
+ pdm2 = zero
+
+ n = np-1
+ nm1 = n-1
+ pd = zero
+
+ if (np <= 1) stop 'minimum number of Gauss-Lobatto points is 2'
+
+! with spectral elements, use at least 3 points
+ if (np <= 2) stop 'minimum number of Gauss-Lobatto points for the SEM is 3'
+
+ if ((alpha <= -one) .or. (beta <= -one)) stop 'alpha and beta must be greater than -1'
+
+ if (nm1 > 0) then
+ alpg = alpha+one
+ betg = beta+one
+ call zwgjd(z(2),w(2),nm1,alpg,betg)
+ endif
+
+ z(1) = - one
+ z(np) = one
+
+ do i=2,np-1
+ w(i) = w(i)/(one-z(i)**2)
+ enddo
+
+ call jacobf(p,pd,pm1,pdm1,pm2,pdm2,n,alpha,beta,z(1))
+ w(1) = endw1(n,alpha,beta)/(two*pd)
+ call jacobf(p,pd,pm1,pdm1,pm2,pdm2,n,alpha,beta,z(np))
+ w(np) = endw2(n,alpha,beta)/(two*pd)
+
+ end subroutine zwgljd
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/readme.txt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/readme.txt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Gnuplot/readme.txt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,54 @@
+--------------------------------
+readme
+--------------------------------
+
+gnuplot
+http://www.gnuplot.info/
+
+
+
+- contains sources to plot PREM model in directory:
+ Gnuplot/display_PREM_model
+
+- contains source file to create gnuplot scripts of regular 2D GLL elements:
+ draw_regular_2D_GLL_element_gnuplot.f90
+
+
+- basic procedure to execute gnuplot scripts:
+
+ simple example to plot a single seismogram:
+
+ run:
+
+ > gnuplot
+
+ then either use
+
+ A) a provided script:
+
+ gnuplot> load "PAS.TS.LHZ.gnu"
+
+ or
+
+ B) the gnuplot command plot:
+
+ gnuplot> plot 'OUTPUT_FILES/PAS.TS.LHZ.sem.ascii' w l
+
+
+ Writing the figure to a file may depend on your gnuplot settings.
+
+ One example to generate a postscript is shown below:
+
+ gnuplot> plot 'OUTPUT_FILES/PAS.TS.LHZ.sem.ascii' w l
+ gnuplot> set term postscript color solid
+
+ Terminal type set to 'postscript'
+ Options are 'landscape noenhanced color colortext \
+ solid dashlength 1.0 linewidth 1.0 defaultplex \
+ palfuncparam 2000,0.003 \
+ butt "Helvetica" 14'
+
+ gnuplot> set output 'my_figure.ps'
+ gnuplot> replot
+ gnuplot> quit
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/animation.jpg
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/animation.jpg
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/google-earth-kml.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/google-earth-kml.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/google-earth-kml.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,124 @@
+#!/usr/bin/perl
+
+use Getopt::Std;
+use POSIX;
+
+sub Usage {
+ print STDERR <<EOF;
+
+Usage: google-earth-kml.pl file_name
+
+
+ ex. ./google-earth-kml.pl gmt_movie*.gif
+
+EOF
+exit(1)
+}
+
+
+if (!getopts('l:L:cdts')) {die('Check input arguments\n');}
+ at ARGV > 0 or Usage();
+
+#######################################################
+## USER/EVENT PARAMETERS
+
+# look at viewpoint
+$lookat_lon= 78.0;
+$lookat_lat= 10.0;
+
+# from CMTSOLUTION file
+$starttime="2003-12-26T01:56:52.4Z";
+
+# time increment per image ( 100 time steps per 0.124 s ~ 12.4 s)
+$tinc = 12.4;
+
+#######################################################
+
+open(KML,">animation.kml") or die("error file open");
+
+print KML '<?xml version="1.0" encoding="UTF-8"?>';print KML "\n";
+print KML '<kml xmlns="http://www.opengis.net/kml/2.2" xmlns:gx="http://www.google.com/kml/ext/2.2" xmlns:kml="http://www.opengis.net/kml/2.2" xmlns:atom="http://www.w3.org/2005/Atom">';print KML "\n";
+print KML "<Folder>\n";
+print KML "<name>Animation</name>\n";
+print KML "<open>0</open>\n";
+
+
+# look at view
+print KML "<LookAt>\n";
+print KML "<longitude> $lookat_lon </longitude>\n";
+print KML "<latitude> $lookat_lat </latitude>\n";
+print KML "<altitude> 0 </altitude>\n";
+print KML "<range>10929687.63258196</range>\n";
+print KML "<tilt>0</tilt>\n";
+print KML "<heading>6.327702684212388</heading>\n";
+print KML "<altitudeMode>relativeToGround</altitudeMode>\n";
+print KML "</LookAt>\n";
+
+
+foreach $file (@ARGV) {
+ print "processing $file\n";
+ if (! -f $file) {die (" check to see if $file exists or not\n");}
+
+ # image overlay
+ print KML "<GroundOverlay>\n";
+ print KML " <name>test-movie</name>\n";
+ print KML " <TimeSpan>\n";
+
+
+ # takes starttime from last image
+ ($cal,$utc) = split("T",$starttime);
+ ($year,$month,$day) = split("-",$cal);
+
+ $utc2 = substr($utc,1,10);
+ ($hh,$mm,$ss) = split(":",$utc2);
+
+ # adds time increment
+ $ss = $ss+$tinc;
+
+ # calculates image time in hours/minutes/seconds
+ if( $ss > 60.0 ){
+ $ss = $ss - 60.0;
+ $mm = $mm + 1;
+ }
+ if( $mm > 60 ){
+ $hh = $hh + 1;
+ $mm = $mm - 60;
+ }
+ if( $hh > 23 ){
+ $hh = 00;
+ $day = $day+1;
+ }
+
+ $time = sprintf("%4.4i-%2.2i-%2.2iT%2.2i:%2.2i:%03.1fZ",$year,$month,$day,$hh,$mm,$ss);
+
+ print KML " <begin>$starttime</begin>\n";
+ print KML " <end>$time</end>\n";
+ print KML " </TimeSpan>\n";
+ print KML " <color>a1ffffff</color>\n";
+ print KML " <Icon>\n";
+ print KML " <href>$file</href>\n";
+ print KML " <viewBoundScale>0.75</viewBoundScale>\n";
+ print KML " </Icon>\n";
+
+ # image box (spans the whole globe)
+ print KML " <LatLonBox>\n";
+ print KML " <north>90.0</north>\n";
+ print KML " <south>-90.0</south>\n";
+ print KML " <east>180.0</east>\n";
+ print KML " <west>-180.0</west>\n";
+
+ print KML " </LatLonBox>\n";
+ print KML " </GroundOverlay>\n";
+
+ # sets new starttime
+ $starttime = $time;
+
+}
+
+print KML "</Folder>\n";
+print KML "</kml>";
+
+
+close(KML);
+
+print " Done !\n";
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/google-earth-kml.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/readme.txt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/readme.txt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/GoogleEarth/readme.txt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,47 @@
+--------------------------------
+readme
+--------------------------------
+
+Google Earth
+http://earth.google.com/
+
+
+
+- procedure to make a google earth movie plot:
+
+1. run specfem with the movie options (see Par_file):
+
+ MOVIE_SURFACE = .true.
+ MOVIE_COARSE = .false.
+
+ and adjust the time steps NSTEP_BETWEEN_FRAMES
+
+ this creates binary files in directory OUTPUT_FILES/ like: moviedata000100,...
+
+
+2. convert binary files to GMT-files:
+
+ in SPECFEM3D_GLOBE: > make xcreate_movie_AVS_DX
+
+ run it > ./xcreate_movie_AVS_DX
+
+ choose option 4 for individual files
+
+ outputs file like: OUTPUT_FILES/gmt_movie_000100.xyz
+
+
+3. render gif files using GMT:
+
+ > UTILS/Visualization/GMT/plot_gmt_movie_file.pl OUTPUT_FILES/gmt_movie*.xyz
+
+
+4. create google animation.kml file:
+
+ > ./google-earth-kml.pl OUTPUT_FILES/gmt_movie*.gif
+
+
+ this will create a file 'animation.kml' which can be opened
+ with GoogleEarth application (http://earth.google.com/)
+
+
+please, change the rendering script 'google-earth-kml.pl' according to your needs.
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/create_record_section_Grace.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/create_record_section_Grace.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/create_record_section_Grace.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,84 @@
+
+ program create_record_section_Grace
+
+! creates files to plot record sections with "Grace"
+! then call with " xmgrace *.sem.recordsection "
+! call this program with " xcreate_record_section_Grace < create_record_section_Grace.in "
+
+! Authors: Jeroen Tromp and Dimitri Komatitsch, mid-2000 and September 2007
+
+ implicit none
+
+! total number of time steps in each seismogram
+ integer, parameter :: NSTEP = 41030
+
+! total number of seismic stations (receivers)
+ integer, parameter :: NSTATIONS = 180
+
+ integer :: it,irec
+
+ real :: epi,epi_start,epi_end,max_amp,t_start,t_end,scale,enhance
+
+ real, dimension(NSTEP) :: time_sem,sem
+
+ character(len=3) component
+ character(len=150) station
+
+ print *,'component (LHZ, LHE, or LHN): '
+ read *,component
+
+ print *,'starting epicentral distance (degrees):'
+ read *,epi_start
+
+ print *,'ending epicentral distance (degrees):'
+ read *,epi_end
+
+ print *,'starting time in record section (minutes):'
+ read *,t_start
+
+ print *,'ending in record section (minutes):'
+ read *,t_end
+
+ print *,'enhancement factor:'
+ read *,enhance
+
+! open the station file
+ open(unit=1,file='output_list_stations.txt',status='unknown')
+
+ do irec = 1,NSTATIONS
+
+ read(1,*) station,epi
+
+ print *,'processing file ',irec,' out of ',NSTATIONS
+
+ if(epi >= epi_start .and. epi <= epi_end) then
+
+ max_amp = -100000.
+
+! read a given seismogram
+ open(unit=10,file=station(1:len_trim(station))//'.'//component(1:3)//'.semd.ascii.convolved',status='old')
+ do it = 1,NSTEP
+ read(10,*) time_sem(it),sem(it)
+! compute maximum of all the traces
+ if(time_sem(it)/60.0 >= t_start .and. time_sem(it)/60.0 <= t_end .and. abs(sem(it)) > max_amp) max_amp = abs(sem(it))
+ enddo
+ close(10)
+
+! compute scaling factor to plot the traces
+ scale = enhance/max_amp
+
+! open the record section file
+ open(unit=10,file=station(1:len_trim(station))//'.'//component(1:3)//'.sem.recordsection',status='unknown')
+ do it = 1,NSTEP
+ if(time_sem(it)/60.0 >= t_start .and. time_sem(it)/60.0 <= t_end) write(10,*) time_sem(it)/60.0,epi+sem(it)*scale
+ enddo
+ close(10)
+
+ endif
+
+ enddo
+
+ close(1)
+
+ end program create_record_section_Grace
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/create_record_section_Grace.in
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/create_record_section_Grace.in (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/create_record_section_Grace.in 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,6 @@
+LHZ
+89.
+180.5
+0.0
+30.0
+7
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/readme.txt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/readme.txt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Grace/readme.txt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,15 @@
+--------------------------------
+readme
+--------------------------------
+
+Grace, a WYSIWYG 2D plotting tool for the X Window System
+http://plasma-gate.weizmann.ac.il/Grace/
+
+
+
+- contains create_record_section_Grace.f90 to creates files to plot
+ record sections with "Grace":
+
+ > xmgrace *.sem.recordsection
+
+
\ No newline at end of file
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/AVS_continent_boundaries.inp
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/AVS_continent_boundaries.inp (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/AVS_continent_boundaries.inp 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,15322 @@
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/copy-info.sh
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/copy-info.sh (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/copy-info.sh 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,33 @@
+#!/bin/sh
+
+# copy-info.sh
+# SPECFEM3D_GLOBE
+#
+
+PWD=`pwd`
+echo "$PWD"
+echo "copy cmt solution etc..."
+
+jobid=$1
+
+#echo "calculating slice files..."
+#./global_slice_number.pl ../../DATA/CMTSOLUTION ../../DATA/STATIONS_ADJOINT ../../DATA/Par_file
+#echo
+
+echo "collecting database files..."
+../collect_database/copy_m_globe_database.pl slices_all ../../OUTPUT_FILES/lsf_machines beta_kernel $jobid
+
+echo
+cd ../../
+make xcombine_vol_data
+cd $PWD
+
+echo "combining mesh..."
+../../xcombine_vol_data UTILS/Paraview/slices_all beta_kernel $PWD $PWD ../../OUTPUT_FILES 1 1
+
+## echo "converting mesh to vtu..."
+#./mesh2vtu.pl -i ../../OUTPUT_FILES/reg_1_beta_kernel.mesh ../../OUTPUT_FILES/reg_1_beta_kernel.vtu
+
+
+echo "done"
+echo
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/copy-info.sh
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number.daniel.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number.daniel.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number.daniel.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,179 @@
+#!/usr/bin/perl -w
+
+# This program figures out the global slice number for given simulation parameters
+# uses xglobal_slice_number and xnormal_plane, compile first from global_slice_util/
+# Qinya Liu, May 2007, Caltech
+
+# modify the following line for the correct location of perl libs (UTILS/lib)
+use lib '/opt/seismo-util/lib/perl';
+use CMT_TOOLS;
+
+if (@ARGV != 3) {die("Usage: global_slice_number.pl CMTSOLUTION STATIONS_ADJOINT Par_file\n");}
+$cmt = $ARGV[0];
+$sta = $ARGV[1];
+$par_file = $ARGV[2];
+
+# obtain event location
+($elat,$elon) = get_cmt_location($cmt);
+
+# obtain station location
+ at lat = ();
+ at lon = ();
+open(IN,$sta);
+ at stations = <IN>;
+close(IN);
+$nstations = @stations;
+
+for($i=0;$i<$nstations;$i++){
+ $line = $stations[$i];
+ (undef,undef,$slat,$slon,undef,undef) = split(" ",$line);
+ push(@lat,$slat);
+ push(@lon,$slon);
+
+ print "event = ($elat,$elon); station = ($lat[$i],$lon[$i]) \n";
+
+}
+#($slat,$slon) = split(" ",`awk 'NR == 1 {print \$3, \$4}' $sta`);
+#print "event = ($elat,$elon); station = ($slat,$slon) \n";
+
+# obtain simulation parameters
+if (not -f $par_file) {die("Check if $par_file exists or not\n");}
+($nchunk) = split(" ",`grep NCHUNKS $par_file|awk '{print \$3}'`);
+($nproc) = split(" ",`grep NPROC_XI $par_file|awk '{print \$3}'`);
+print "NCHUNKS = $nchunk, nproc = $nproc\n";
+if ($nchunk != 6) {
+ ($xi_width) = split(" ",`grep ANGULAR_WIDTH_XI_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($eta_width) = split(" ",`grep ANGULAR_WIDTH_ETA_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($clat) = split(" ",`grep CENTER_LATITUDE_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($clon) = split(" ",`grep CENTER_LONGITUDE_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($grot) = split(" ",`grep GAMMA_ROTATION_AZIMUTH $par_file|awk '{print \$3}'`);
+ print "xi_width = $xi_width, eta_width = $eta_width; clat = $clat, clon = $clon; grot = $grot\n";
+}
+
+# all
+open(SLICE_ALL,">slices_all");
+for ($i = 0; $i < $nproc*$nproc*$nchunk; $i++ ) {
+ print SLICE_ALL "$i\n";
+}
+close(SLICE_ALL);
+
+# minor
+print "compute slices along minor arc ...\n";
+
+for($istation=0;$istation<$nstations;$istation++){
+ $slat = $lat[$istation];
+ $slon = $lon[$istation];
+
+ if ($nchunk == 6) {
+ $command = "./xglobal_slice_number $elon $elat $slon $slat $nproc 0";
+ }else {
+ $command = "./xglobal_slice_number $elon $elat $slon $slat $nproc 0 $nchunk $xi_width $eta_width $clon $clat $grot";}
+
+ if( $istation == 0 ){
+ system(" $command > slices_minor ");
+ }else {
+ system(" $command >> slices_minor ");
+ }
+}
+
+#sorts out doubles
+open(IN,"slices_minor");
+ at slices = <IN>;
+close(IN);
+$nslices = @slices;
+ at uni = ();
+for($i=0;$i<$nslices;$i++){
+ $sl = $slices[$i];
+ $found = 0;
+ for($j=0;$j<@uni;$j++){
+ if( $sl == $uni[$j] ){
+ $found = 1;
+ last;
+ }
+ }
+ if( $found == 0 ){
+ push(@uni,$sl);
+ }
+}
+open(OUT,">slices_minor");
+for($i=0;$i<@uni;$i++){
+ print OUT "$uni[$i]";
+}
+close(OUT);
+
+# major
+print "compute slices along major arc ...\n";
+
+for($istation=0;$istation<$nstations;$istation++){
+ $slat = $lat[$istation];
+ $slon = $lon[$istation];
+
+ if ($nchunk == 6) {
+ $command = "./xglobal_slice_number $elon $elat $slon $slat $nproc 1";
+ }else {
+ $command = "./xglobal_slice_number $elon $elat $slon $slat $nproc 1 $nchunk $xi_width $eta_width $clon $clat $grot";}
+
+ if( $istation == 0 ){
+ system(" $command > slices_major ");
+ }else {
+ system(" $command >> slices_major ");
+ }
+}
+
+#sorts out doubles
+open(IN,"slices_major");
+ at slices = <IN>;
+close(IN);
+$nslices = @slices;
+ at uni = ();
+for($i=0;$i<$nslices;$i++){
+ $sl = $slices[$i];
+ $found = 0;
+ for($j=0;$j<@uni;$j++){
+ if( $sl == $uni[$j] ){
+ $found = 1;
+ last;
+ }
+ }
+ if( $found == 0 ){
+ push(@uni,$sl);
+ }
+}
+open(OUT,">slices_major");
+for($i=0;$i<@uni;$i++){
+ print OUT "$uni[$i]";
+}
+close(OUT);
+
+
+
+
+
+if ($nchunk == 6) {
+ print "output slices_ic file\n";
+ $nslice = $nproc * $nproc;
+ `cat slices_minor slices_major | sort -g | awk '\$1 < $nslice {print \$1}' > slice_ab_old`;
+
+ open(SLICE,"slice_ab_old");
+ @tmp=<SLICE>;
+ close(SLICE);
+
+ open(SLICE_IC,">slices_ic");
+ for ($i = 0; $i < $nslice; $i ++ ) {
+ for ($j = 0; $j < @tmp; $j ++ ){
+ if ($i == $tmp[$j]) {last;}
+ if ($j == @tmp - 1) {print SLICE_IC "$i\n";}
+ }
+ }
+ close(SLICE_IC);
+}
+
+# figure out the normal to the source-receiver plane
+print "calculate normal to source and receiver plane\n";
+$command = "./xnormal_plane $elat $elon $slat $slon";
+$result = `$command`;
+print "$result\n";
+
+# clean up temp files
+system(" rm -f slice_ab_old gcarc_station.txt xsection_translate.txt");
+
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number.daniel.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,81 @@
+#!/usr/bin/perl -w
+
+# This program figures out the global slice number for given simulation parameters
+# uses xglobal_slice_number and xnormal_plane, compile first from global_slice_util/
+# Qinya Liu, May 2007, Caltech
+
+# modify the following line for the correct location of perl libs (UTILS/lib)
+use lib '/opt/seismo-util/lib/perl';
+use CMT_TOOLS;
+
+if (@ARGV != 3) {die("Usage: global_slice_number.pl CMTSOLUTION STATIONS_ADJOINT Par_file\n");}
+$cmt = $ARGV[0];
+$sta = $ARGV[1];
+$par_file = $ARGV[2];
+
+# obtain event location
+($elat,$elon) = get_cmt_location($cmt);
+
+# obtain station location
+($slat,$slon) = split(" ",`awk 'NR == 1 {print \$3, \$4}' $sta`);
+
+print "event = ($elat,$elon); station = ($slat,$slon) \n";
+
+# obtain simulation parameters
+if (not -f $par_file) {die("Check if $par_file exists or not\n");}
+($nchunk) = split(" ",`grep NCHUNKS $par_file|awk '{print \$3}'`);
+($nproc) = split(" ",`grep NPROC_XI $par_file|awk '{print \$3}'`);
+print "NCHUNKS = $nchunk, nproc = $nproc\n";
+if ($nchunk != 6) {
+ ($xi_width) = split(" ",`grep ANGULAR_WIDTH_XI_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($eta_width) = split(" ",`grep ANGULAR_WIDTH_ETA_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($clat) = split(" ",`grep CENTER_LATITUDE_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($clon) = split(" ",`grep CENTER_LONGITUDE_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($grot) = split(" ",`grep GAMMA_ROTATION_AZIMUTH $par_file|awk '{print \$3}'`);
+ print "xi_width = $xi_width, eta_width = $eta_width; clat = $clat, clon = $clon; grot = $grot\n";
+}
+
+# minor
+print "compute slices along minor arc ...\n";
+if ($nchunk == 6) {
+ $command = "xglobal_slice_number $elon $elat $slon $slat $nproc 0";
+}else {
+ $command = "xglobal_slice_number $elon $elat $slon $slat $nproc 0 $nchunk $xi_width $eta_width $clon $clat $grot";}
+system(" $command > slices_minor ");
+
+# major
+print "compute slices along major arc ...\n";
+if ($nchunk == 6) {
+ $command = "xglobal_slice_number $elon $elat $slon $slat $nproc 1";
+}else {
+ $command = "xglobal_slice_number $elon $elat $slon $slat $nproc 1 $nchunk $xi_width $eta_width $clon $clat $grot";}
+system(" $command > slices_major ");
+
+if ($nchunk == 6) {
+ print "output slices_ic file\n";
+ $nslice = $nproc * $nproc;
+ `cat slices_minor slices_major | sort -g | awk '\$1 < $nslice {print \$1}' > slice_ab_old`;
+
+ open(SLICE,"slice_ab_old");
+ @tmp=<SLICE>;
+ close(SLICE);
+
+ open(SLICE_IC,">slices_ic");
+ for ($i = 0; $i < $nslice; $i ++ ) {
+ for ($j = 0; $j < @tmp; $j ++ ){
+ if ($i == $tmp[$j]) {last;}
+ if ($j == @tmp - 1) {print SLICE_IC "$i\n";}
+ }
+ }
+ close(SLICE_IC);
+}
+
+# figure out the normal to the source-receiver plane
+print "calculate normal to source and receiver plane\n";
+$command = "xnormal_plane $elat $elon $slat $slon";
+$result = `$command`;
+print "$result\n";
+
+# clean up temp files
+system(" rm -f slice_ab_old gcarc_station.txt xsection_translate.txt");
+
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number2.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number2.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number2.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,83 @@
+#!/usr/bin/perl -w
+
+# This program figures out the global slice number on a source-receiver
+# belt for given simulation parameters
+# uses xglobal_slice_number and xnormal_plane, compile first from global_slice_util/
+# Qinya Liu, Caltech, May 2007
+
+# modify the following line for the correct location of perl libs (UTILS/lib)
+use lib '/opt/seismo-util/lib/perl';
+use CMT_TOOLS;
+
+if (@ARGV != 4) {die("Usage: global_slice_number.pl CMTSOLUTION STATIONS_ADJOINT Par_file lat_belt_width (in degrees)\n");}
+$cmt = $ARGV[0];
+$sta = $ARGV[1];
+$par_file = $ARGV[2];
+$lat0 = $ARGV[3];
+
+# obtain event location
+($elat,$elon) = get_cmt_location($cmt);
+
+# obtain station location
+($slat,$slon) = split(" ",`awk 'NR == 1 {print \$3, \$4}' $sta`);
+
+print "event = ($elat,$elon); station = ($slat,$slon) \n";
+
+# obtain simulation parameters
+if (not -f $par_file) {die("Check if $par_file exists or not\n");}
+($nchunk) = split(" ",`grep NCHUNKS $par_file|awk '{print \$3}'`);
+($nproc) = split(" ",`grep NPROC_XI $par_file|awk '{print \$3}'`);
+print "NCHUNKS = $nchunk, nproc = $nproc\n";
+if ($nchunk != 6) {
+ ($xi_width) = split(" ",`grep ANGULAR_WIDTH_XI_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($eta_width) = split(" ",`grep ANGULAR_WIDTH_ETA_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($clat) = split(" ",`grep CENTER_LATITUDE_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($clon) = split(" ",`grep CENTER_LONGITUDE_IN_DEGREES $par_file|awk '{print \$3}'`);
+ ($grot) = split(" ",`grep GAMMA_ROTATION_AZIMUTH $par_file|awk '{print \$3}'`);
+ print "xi_width = $xi_width, eta_width = $eta_width; clat = $clat, clon = $clon; grot = $grot\n";
+}
+
+# minor
+print "compute slices along minor arc ...\n";
+if ($nchunk == 6) {
+ $command = "xglobal_slice_number $elon $elat $slon $slat $nproc 0 $lat0";
+}else {
+ $command = "xglobal_slice_number $elon $elat $slon $slat $nproc 0 $nchunk $xi_width $eta_width $clon $clat $grot $lat0";}
+system(" $command > slices_minor ");
+
+# major
+print "compute slices along major arc ...\n";
+if ($nchunk == 6) {
+ $command = "xglobal_slice_number $elon $elat $slon $slat $nproc 1 $lat0";
+}else {
+ $command = "xglobal_slice_number $elon $elat $slon $slat $nproc 1 $nchunk $xi_width $eta_width $clon $clat $grot $lat0";}
+system(" $command > slices_major ");
+
+if ($nchunk == 6) {
+ print "output slices_ic file\n";
+ $nslice = $nproc * $nproc;
+ `cat slices_minor slices_major | sort -g | awk '\$1 < $nslice {print \$1}' > slice_ab_old`;
+
+ open(SLICE,"slice_ab_old");
+ @tmp=<SLICE>;
+ close(SLICE);
+
+ open(SLICE_IC,">slices_ic");
+ for ($i = 0; $i < $nslice; $i ++ ) {
+ for ($j = 0; $j < @tmp; $j ++ ){
+ if ($i == $tmp[$j]) {last;}
+ if ($j == @tmp - 1) {print SLICE_IC "$i\n";}
+ }
+ }
+ close(SLICE_IC);
+}
+
+# figure out the normal to the source-receiver plane
+print "calculate normal to source and receiver plane\n";
+$command = "xnormal_plane $elat $elon $slat $slon";
+$result = `$command`;
+print "$result\n";
+
+# clean up temp files
+system(" rm -f slice_ab_old gcarc_station.txt xsection_translate.txt");
+
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_number2.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/CMTSOLUTION
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/CMTSOLUTION (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/CMTSOLUTION 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,13 @@
+PDE 1994 6 9 0 33 16.40 -13.8300 -67.5600 637.0 6.9 6.8 NORTHERNBOLIVIA
+event name: 060994A
+time shift: 0.0000
+half duration: 10.0000
+latitude: -13.8200
+longitude: -67.2500
+depth: 15.0000
+Mrr: -7.600000e+27
+Mtt: 7.700000e+27
+Mpp: -2.000000e+26
+Mrt: -2.500000e+28
+Mrp: 4.000000e+26
+Mtp: -2.500000e+27
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/Makefile
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/Makefile (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/Makefile 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,27 @@
+F90 = ifort
+F90_FLAGS = -O3
+
+LIB =
+
+SUB_MOD = sub_slice_number
+SRC_ALL = global_slice_number normal_plane make_az_stations
+
+MOD_DIR = mod
+OBJ_DIR = obj
+BIN_DIR = ..
+
+SUB_MOD_OBJ = $(patsubst %,$(OBJ_DIR)/%.o,$(SUB_MOD))
+SRC_OBJ = $(patsubst %,$(OBJ_DIR)/%.o,$(SRC_ALL))
+
+F90_OBJ = $(SUB_MOD_OBJ) $(SRC_OBJ)
+
+all : $(SRC_ALL)
+
+$(SRC_ALL): % : %.f90 $(SUB_MOD_OBJ) constants.h
+ $(F90) -o $(BIN_DIR)/x$@ $(F90_FLAGS) $*.f90 -module $(MOD_DIR) $(SUB_MOD_OBJ) $(LIB)
+
+$(SUB_MOD_OBJ): $(OBJ_DIR)/%.o : %.f90
+ $(F90) -c -o $(OBJ_DIR)/$*.o $*.f90 -module $(MOD_DIR)
+
+clean:
+ \rm -f $(MOD_DIR)/*.mod $(OBJ_DIR)/*.o *.o *.mod *~ garc_station.txt xsection_translate.txt xglobal_slice_number xmake_az_stations xnormal_plane
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/constants.h
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/constants.h (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/constants.h 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,12 @@
+ integer, parameter :: SIZE_REAL = 4
+ integer, parameter :: SIZE_DOUBLE = 8
+
+! uncomment this to run in single precision
+ integer, parameter :: CUSTOM_REAL = SIZE_REAL
+! uncomment this to run in double precision (increases memory size by 2)
+! integer, parameter :: CUSTOM_REAL = SIZE_DOUBLE
+
+ real(kind=CUSTOM_REAL), parameter :: pi = 3.1415926
+ real(kind=CUSTOM_REAL), parameter :: EPS = 0.01_CUSTOM_REAL
+
+ integer, parameter :: NPTS = 100000
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/global_slice_number.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/global_slice_number.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/global_slice_number.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,190 @@
+program global_slice_number
+
+! this program computes the slice numbers the source-receiver lin goes through
+! for given source receiver location and simulation parameters
+! Qinya Liu, Caltech, May 2007
+
+ use sub_slice_number
+
+ implicit none
+
+ character(len=200) :: ch_elon, ch_elat, ch_slon, ch_slat, ch_nproc, ch_narc, ch_usage, ch_arg7, ch_arg8, &
+ ch_eta_width, ch_clon, ch_clat, ch_grot, ch_arg13
+ logical :: belt_region
+ integer :: nchunks, narc, nproc, np, nt, i, ii, k, j, nproc_xi, nproc_eta, np_short
+ integer, dimension(NPTS) :: chunk, slices, slices_short
+
+ real(kind=CUSTOM_REAL) :: elon, elat, slon, slat, xi_width, eta_width, lat0, th0, clon, clat, grot, &
+ ths, phs, thr, phr, thn, phn, ths_new, phs_new, thr_new, phr_new, delta, rotation_matrix(3,3), &
+ x, y, z, xn, yn, zn, xik, etak, xi1, eta1
+ real(kind=CUSTOM_REAL), dimension(NPTS) :: th, ph, thp, php, xi,eta
+
+ !============================
+
+ ! set up the input arguments
+
+ call getarg(1,ch_elon)
+ call getarg(2,ch_elat)
+ call getarg(3,ch_slon)
+ call getarg(4,ch_slat)
+ call getarg(5,ch_nproc)
+ call getarg(6,ch_narc)
+
+ ch_usage = 'Usage: global_slice_number elon elat slon slat nproc narc [nchunks xi_width eta_width clon clat grot] [lat0]'
+
+ if (trim(ch_elon) == '' .or. trim(ch_elat) == '' .or. trim(ch_slon) == '' .or. &
+ trim(ch_slat) == '' .or. trim(ch_nproc) == '' .or. trim(ch_narc) == '') then
+ print *, trim(ch_usage)
+ stop
+ endif
+
+ read(ch_elon,*) elon
+ read(ch_elat,*) elat
+ read(ch_slon,*) slon
+ read(ch_slat,*) slat
+ read(ch_nproc,*) nproc
+ read(ch_narc,*) narc
+
+ call getarg(7,ch_arg7)
+ if (trim(ch_arg7) == '') then
+ belt_region = .false.
+ nchunks = 6
+ xi_width = 90.
+ eta_width = 90.
+ else
+ call getarg(8,ch_arg8)
+ if (trim(ch_arg8) == '') then
+ belt_region = .true.
+ nchunks = 6
+ xi_width = 90.
+ eta_width = 90.
+ read(ch_arg7,*) lat0
+ else
+ read(ch_arg7,*) nchunks
+ read(ch_arg8,*) xi_width
+ call getarg(9,ch_eta_width)
+ call getarg(10,ch_clon)
+ call getarg(11,ch_clat)
+ call getarg(12,ch_grot)
+ if (trim(ch_eta_width) == '' .or. trim(ch_clon) == '' .or. trim(ch_clat) == '' .or. trim(ch_grot) == '') then
+ print *, trim(ch_usage)
+ stop
+ else
+ read(ch_eta_width,*) eta_width
+ read(ch_clon,*) clon
+ read(ch_clat,*) clat
+ read(ch_grot,*) grot
+
+ call getarg(13,ch_arg13)
+ if (trim(ch_arg13) == '') then
+ belt_region = .false.
+ else
+ belt_region = .true.
+ read(ch_arg13,*) lat0
+ endif
+ endif
+ endif
+ endif
+
+ ! check the input arguements
+ if (nchunks /= 6 .and. nchunks /= 1 .and. nchunks /= 2) stop 'nchunks = 1, 2, 6'
+ if (narc /= 1 .and. narc /= 0) stop 'narc = 0,1'
+ if (xi_width > 90.0 .or. eta_width > 90.0) stop 'xi(eta)_width <= 90.0'
+
+ ! convert to degrees to radians
+ ths = (90-elat)/180. * pi
+ phs = elon/180. * pi
+ thr = (90-slat)/180. * pi
+ phr = slon/180. * pi
+ xi_width = xi_width/180. * pi
+ eta_width = eta_width/180. * pi
+ if (nchunks /= 6) then
+ clon = clon/180. * pi
+ clat = clat/180. * pi
+ grot = grot/180. * pi
+ endif
+
+ if (belt_region) th0 = lat0/180. * pi
+
+ ! figure out the normal of source-receiver plane, and rotate them to the equator
+ call tp2norm(ths,phs,thr,phr,thn,phn)
+ call norm_rot(thn,phn,ths,phs,ths_new,phs_new)
+ call norm_rot(thn,phn,thr,phr,thr_new,phr_new)
+ if ((ths_new-pi/2) > EPS .or. (thr_new-pi/2) > EPS) stop 'New lat of source/receiver is not 0'
+
+ ! discretize the source receiver garc, and figure out the slice number for individual point
+ np = 180
+ if (phr_new < phs_new) phr_new = phr_new + 2 * pi
+ if (((phr_new - phs_new) <= pi .and. narc == 0) .or. ((phr_new-phs_new) > pi .and. narc == 1)) then
+ call linarray(ph,np,phs_new,phr_new)
+ delta = phr_new - phs_new
+ else
+ call linarray(ph,np,phr_new-2*pi,phs_new)
+ delta = phs_new - phr_new + 2*pi
+ endif
+ !print *, 'Delta = ', delta
+
+ if (nchunks /= 6) call rotmat(clon,clat,grot,rotation_matrix)
+
+ chunk(1:np) = 10.
+
+ if (belt_region) then
+ nt = 10
+ call linarray(th,nt,-th0,th0)
+ else
+ nt = 1
+ th(1) = 0.
+ open(11,file='garc_station.txt',status='unknown')
+ open(12,file='xsection_translate.txt',status='unknown')
+ endif
+
+ j = 0
+ do ii = 1, nt
+ do i = 1, np
+ call norm_rot_back(thn,phn,pi/2+th(ii),ph(i),thp(i),php(i))
+ call tp2xyz(thp(i),php(i),x,y,z)
+
+ if (.not. belt_region) then
+ write(11,*) thp(i) * 180./pi, php(i) * 180./pi
+ if (i == np/2) write(12,*) x, y, z
+ endif
+
+ if (nchunks /= 6) then
+ xn = x * rotation_matrix(1,1) + y * rotation_matrix(2,1) + z * rotation_matrix(3,1)
+ yn = x * rotation_matrix(1,2) + y * rotation_matrix(2,2) + z * rotation_matrix(3,2)
+ zn = x * rotation_matrix(1,3) + y * rotation_matrix(2,3) + z * rotation_matrix(3,3)
+ x = xn; y = yn; z = zn
+ endif
+
+ do k = 1, nchunks
+ call chunk_map(k,x,y,z,xik,etak)
+ if (abs(xik) <= pi/4 .and. abs(etak) <= pi/4) then
+ chunk(i) = k; xi(i) = xik; eta(i) = etak
+ endif
+ enddo
+
+ if (nchunks /= 6 .and. (chunk(i) > nchunks .or. abs(xi(i) > pi/2) .or. abs(eta(i)) > pi/2)) then
+ write(ch_usage,*) 'Check if point ', x, ',', y, ',', z, ' is within the region or not'
+ print *, trim(ch_usage)
+ stop
+ endif
+
+ xi1 = xi(i)/xi_width * 2; eta1 = eta(i) /eta_width * 2
+ nproc_xi = floor((xi1+1)/2 * nproc); nproc_eta = floor((eta1+1)/2 * nproc)
+ j = j + 1; slices(j) = nproc * nproc * (chunk(i)-1) + nproc * nproc_eta + nproc_xi
+ end do
+ end do
+
+ ! compact the slice numbers into an array
+ np = np * nt
+ call compact_int_array(slices,np,slices_short,np_short)
+
+ ! write the result out
+ do i = 1, np_short
+ print *, slices_short(i)
+ enddo
+
+ if (.not. belt_region) close(11); close(12)
+
+
+end program global_slice_number
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/make_az_stations.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/make_az_stations.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/make_az_stations.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,77 @@
+program make_az_stations
+
+! this program computes a station list from a source location at given azimuth
+! Qinya Liu, Caltech, May 2007
+
+
+ use sub_slice_number
+
+ implicit none
+
+ character(len=200) :: ch_elon, ch_elat, ch_az, ch_dist, filename
+ real(kind=CUSTOM_REAL) :: elon, elat, az, ths, phs, thn, phn, azr, thn_new, phn_new, phr, dist
+ integer np, i
+ real(kind=CUSTOM_REAL), dimension(1000) :: thr_array, thr_new, phr_new, latr_new, lonr_new
+
+ !============================
+
+ ! set up the input arguments
+
+ call getarg(1,ch_elon)
+ call getarg(2,ch_elat)
+ call getarg(3,ch_az)
+
+ if (trim(ch_elon) == '' .or. trim(ch_elat) == '' .or. trim(ch_az) == '') then
+ print *, 'Usage: xmake_az_stations elon elat az [dist(degrees)]'
+ stop
+ endif
+
+ read(ch_elon,*) elon
+ read(ch_elat,*) elat
+ read(ch_az,*) az
+
+ ! convert to degrees to radians
+ ths = (90-elat)/180. * pi
+ phs = elon/180. * pi
+
+ ! another point is the north pole
+ thn = (90-90)/180. * pi
+ phn = 0/180. * pi
+
+ ! receiver azimuth
+ azr = az /180. * pi
+
+ ! rotate (ths,phs) to North Pole, and figure out the new location of old N. Pole
+ call norm_rot(ths,phs,thn,phn,thn_new,phn_new)
+ print *, 'After rotating the source to the N. Pole, old N. Pole become: '
+ print *, thn_new*180/pi, phn_new *180/pi
+
+ phr = phn_new - azr ! here could be + azr as well
+ write(filename,'(a,i3.3)') 'STATIONS_',floor(az)
+ open(11,file=trim(filename),status='unknown')
+
+ ! read in extra distance argument
+ call getarg(4,ch_dist)
+ if (trim(ch_dist) .ne. '') then
+ read(ch_dist,*) dist
+ np = 1
+ thr_array(1) = dist / 180. * pi
+ else
+ ! discretize the receiver garc, and figure out the slice number for individual point
+ np = 180
+ end if
+
+ do i = 1, np
+ if (trim(ch_dist) == '') thr_array(i) = (i*1.) / np * pi
+ call norm_rot_back(ths,phs,thr_array(i),phr,thr_new(i),phr_new(i))
+ latr_new(i) = (pi/2 - thr_new(i)) * 180/pi
+ lonr_new(i) = phr_new(i) * 180/pi
+
+ write(11,'(a,i3.3,4x,a,4x,f10.3,4x,f10.3,4x,f5.2,4x,f5.2)') 'T',i,'NT',latr_new(i),lonr_new(i),0.,0.
+
+ end do
+
+ close(11)
+
+
+end program make_az_stations
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/normal_plane.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/normal_plane.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/normal_plane.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,35 @@
+program normal_plane
+
+! this program computes the normal to the source-receiver plane
+! Qinya Liu, Caltech, May 2007
+
+ use sub_slice_number
+
+ implicit none
+
+ character(len=100) :: ch_lats, ch_lons, ch_latr, ch_lonr
+ real(kind=CUSTOM_REAL) :: lats, lons, latr, lonr, xs, ys, zs, nx, ny, nz, xc, yc, zc
+
+ call getarg(1,ch_lats)
+ call getarg(2,ch_lons)
+ call getarg(3,ch_latr)
+ call getarg(4,ch_lonr)
+
+ if (trim(ch_lats) == '' .or. trim(ch_lons) == '' .or. trim(ch_latr) == '' .or. trim(ch_lonr) == '') &
+ stop 'Usage: normal_plane lats lons latr lonr'
+
+ read(ch_lats,*) lats
+ read(ch_lons,*) lons
+ read(ch_latr,*) latr
+ read(ch_lonr,*) lonr
+
+ call latlon2norm(lats,lons,latr,lonr,xs,ys,zs,nx,ny,nz,xc,yc,zc)
+
+ write(*,'(3f10.3,a)') xs, ys, zs, ' --- source location'
+
+ write(*,'(3f10.3,a)') nx, ny, nz, ' --- normal of s-r plane'
+
+ write(*,'(3f10.3,a)') xc, yc, zc, ' --- center of s-r gcarc'
+
+
+end program normal_plane
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/sub_slice_number.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/sub_slice_number.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/global_slice_util/sub_slice_number.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,390 @@
+module sub_slice_number
+
+! this file holds all the subroutines needed the main programs in this dir
+! Qinya Liu, Caltech, May 2007
+
+ implicit none
+
+ include 'constants.h'
+
+contains
+
+
+ subroutine tp2norm(ths,phs,thr,phr,thn,phn)
+
+ ! find out the normal of the plane constructed
+ ! by (ths,phs), (thr,phr), and the origin using
+ ! cross-product.
+
+ real(kind=CUSTOM_REAL) :: ths, phs, thr, phr, thn, phn
+
+ real(kind=CUSTOM_REAL) :: xs, ys, zs, xr, yr, zr, nx, ny, nz
+
+ call tp2xyz(ths,phs,xs,ys,zs)
+ call tp2xyz(thr,phr,xr,yr,zr)
+ nx = ys*zr - zs*yr
+ ny = -(xs*zr - zs*xr)
+ nz = xs*yr - ys*xr
+
+ call xyz2tp(nx,ny,nz,thn,phn)
+
+
+ end subroutine tp2norm
+
+ ! ------------------------------------------------
+
+ subroutine tp2norm2(ths,phs,thr,phr,nx,ny,nz)
+
+! find out the normal of the plane (nx,ny,nz)
+! constructed by (ths,phs), (thr,phr), and the origin.
+
+ real(kind=CUSTOM_REAL) :: ths, phs, thr, phr, nx, ny, nz
+
+ real(kind=CUSTOM_REAL) :: xs, ys, zs, xr, yr, zr, nr
+
+ call tp2xyz(ths,phs,xs,ys,zs)
+ call tp2xyz(thr,phr,xr,yr,zr)
+ nx = ys*zr - zs*yr
+ ny = -(xs*zr - zs*xr)
+ nz = xs*yr - ys*xr
+ nr = sqrt(nx*nx+ny*ny+nz*nz)
+ nx = nx/nr
+ ny = ny/nr
+ nz = nz/nr
+
+ end subroutine tp2norm2
+
+ ! -------------------------------------------------
+
+ subroutine norm_rot(thn,phn,th,ph,th_new,ph_new)
+
+
+ ! coordinates change from (th,ph) to (th_new,ph_new)
+ ! according to a rotation that converts (thn,phn) to
+ ! z axis
+
+ real(kind=CUSTOM_REAL) :: thn, phn, th, ph, th_new, ph_new
+
+ real(kind=CUSTOM_REAL) :: rot(3,3), x, y, z, x_new, y_new, z_new
+
+ rot(1,1) = cos(thn)*cos(phn)
+ rot(1,2) = cos(thn)*sin(phn)
+ rot(1,3) = -sin(thn)
+ rot(2,1) = -sin(phn)
+ rot(2,2) = cos(phn)
+ rot(2,3) = 0
+ rot(3,1) = sin(thn)*cos(phn)
+ rot(3,2) = sin(thn)*sin(phn)
+ rot(3,3) = cos(thn)
+
+ call tp2xyz(th,ph,x,y,z)
+ x_new = rot(1,1) * x + rot(1,2) * y + rot(1,3) * z
+ y_new = rot(2,1) * x + rot(2,2) * y + rot(2,3) * z
+ z_new = rot(3,1) * x + rot(3,2) * y + rot(3,3) * z
+
+ call xyz2tp(x_new,y_new,z_new,th_new,ph_new)
+
+ end subroutine norm_rot
+
+ ! -------------------------------------------------
+
+ subroutine linarray(array,n,a0,a1)
+
+
+ real(kind=CUSTOM_REAL) :: array(*), a0, a1
+ integer n
+
+ real(kind=CUSTOM_REAL) :: da
+ integer :: i
+
+ if (n <= 0) stop 'number of points in linarray n > 0'
+ if (n == 1 .and. abs(a0-a1) > EPS) stop 'number of points n = 1 asks for a0 = a1'
+
+ if (n == 1) then
+ array(1) = a0
+ else
+ da = (a1-a0)/(n-1)
+ do i = 1, n
+ array(i) = a0 + (i-1) * da
+ enddo
+ endif
+
+ end subroutine linarray
+
+ ! -------------------------------------------------
+
+ subroutine rotmat(clon,clat,grot,rotation_matrix)
+
+ ! this function calculate the 3x3 rotation matrix from the AB chunk
+ ! frame to the actual frame defined by (clon,clat,grot)
+
+ real(kind=CUSTOM_REAL) :: clon,clat,grot, rotation_matrix(3,3)
+
+ real(kind=CUSTOM_REAL) :: alpha, beta, gamma, sina, cosa, sinb, cosb, &
+ sing, cosg
+
+ ! compute colatitude and longitude
+ alpha = clon
+ beta = pi/2 - clat
+ gamma = grot
+
+ sina = sin(alpha)
+ cosa = cos(alpha)
+ sinb = sin(beta)
+ cosb = cos(beta)
+ sing = sin(gamma)
+ cosg = cos(gamma)
+
+ ! define rotation matrix
+ rotation_matrix(1,1) = cosg*cosb*cosa-sing*sina
+ rotation_matrix(1,2) = -sing*cosb*cosa-cosg*sina
+ rotation_matrix(1,3) = sinb*cosa
+ rotation_matrix(2,1) = cosg*cosb*sina+sing*cosa
+ rotation_matrix(2,2) = -sing*cosb*sina+cosg*cosa
+ rotation_matrix(2,3) = sinb*sina
+ rotation_matrix(3,1) = -cosg*sinb
+ rotation_matrix(3,2) = sing*sinb
+ rotation_matrix(3,3) = cosb
+
+ end subroutine rotmat
+
+ ! -------------------------------------------
+
+ subroutine norm_rot_back(thn,phn,th,ph,th_old,ph_old)
+
+ !coordinates change from (th_old,ph_old) to (th,ph)
+ ! according to a rotation that converts (thn,phn) to
+ ! z axis
+
+ real(kind=CUSTOM_REAL) :: thn, phn, th, ph, th_old, ph_old
+
+ real(kind=CUSTOM_REAL) :: rot(3,3), x,y,z, x_old, y_old, z_old
+
+ rot(1,1) = cos(thn)*cos(phn)
+ rot(1,2) = cos(thn)*sin(phn)
+ rot(1,3) = -sin(thn)
+ rot(2,1) = -sin(phn)
+ rot(2,2) = cos(phn)
+ rot(2,3) = 0
+ rot(3,1) = sin(thn)*cos(phn)
+ rot(3,2) = sin(thn)*sin(phn)
+ rot(3,3) = cos(thn)
+ call tp2xyz(th,ph,x,y,z)
+ x_old = rot(1,1) * x + rot(2,1) * y + rot(3,1) * z
+ y_old = rot(1,2) * x + rot(2,2) * y + rot(3,2) * z
+ z_old = rot(1,3) * x + rot(2,3) * y + rot(3,3) * z
+
+ call xyz2tp(x_old,y_old,z_old,th_old,ph_old)
+
+ end subroutine norm_rot_back
+
+ ! ----------------------------------------------
+
+ subroutine tp2xyz(th,ph,x,y,z)
+
+ real(CUSTOM_REAL) :: th,ph,x,y,z
+
+ ! convert (th,ph) to (x,y,z) on unit sphere
+ x = sin(th) * cos(ph)
+ y = sin(th) * sin(ph)
+ z = cos(th)
+
+ end subroutine tp2xyz
+
+ ! ---------------------------------------
+
+ subroutine xyz2tp(x,y,z,th,ph)
+
+ real(kind=CUSTOM_REAL) :: x, y, z, th, ph
+
+ ! convert x,y,z to a point on unit sphere
+
+ ph = atan2(y,x)
+ th = atan2(sqrt(x*x+y*y),z)
+ if (th < 0) th = th + pi
+ if (ph < 0) ph = ph + 2*pi
+
+ end subroutine xyz2tp
+
+ ! ---------------------------------------
+
+ subroutine chunk_map(k,xx,yy,zz,xi,eta)
+
+ ! this program get the xi,eta for (xx,yy,zz)
+ ! point under the k'th chunk coordinate
+ ! transformation
+
+ real(kind=CUSTOM_REAL) :: xx, yy, zz, xi, eta
+ integer :: k
+
+ real(kind=CUSTOM_REAL) :: x, y, z
+
+ x = xx; y = yy; z = zz
+ if (x < EPS .and. x >= 0) x = EPS
+ if (x > -EPS .and. x < 0) x = -EPS
+ if (y < EPS .and. y >= 0) y = EPS
+ if (y > -EPS .and. y < 0) y = -EPS
+ if (z < EPS .and. z >= 0) z = EPS
+ if (z > -EPS .and. z < 0) z = -EPS
+
+ if (k == 1) then ! CHUNK_AB
+ xi = atan(y/z); eta = atan(-x/z)
+ if (z < 0) xi = 10
+ else if (k == 2) then ! CHUNK_AC
+ xi = atan(-z/y); eta = atan(x/y)
+ if (y > 0) xi = 10
+ else if (k == 3) then ! CHUNK_BC
+ xi = atan(-z/x); eta = atan(-y/x)
+ if (x > 0) xi = 10
+ else if (k == 4) then ! CHUNK_AC'
+ xi = atan(-z/y); eta = atan(-x/y)
+ if (y < 0) xi = 10
+ else if (k == 5) then ! CHUNK_BC'
+ xi = atan(z/x); eta = atan(-y/x)
+ if (x < 0) xi = 10
+ else if (k == 6) then ! CHUNK_AB'
+ xi = atan(y/z); eta = atan(x/z)
+ if (z > 0) xi = 10
+ else
+ stop 'chunk number k < 6'
+ end if
+
+ end subroutine chunk_map
+
+
+ ! ------------------------------------------
+
+ subroutine compact_int_array(s,np,ss,np2)
+
+ integer :: s(*), ss(*)
+ integer :: np, np2, i
+
+ ss(1) = s(1)
+ np2 = 1
+
+ do i = 2, np
+ if (all((s(i)-ss(1:np2)) /= 0)) then
+ np2 = np2 + 1
+ ss(np2) = s(i)
+ endif
+ enddo
+
+ end subroutine compact_int_array
+
+
+! -----------------------------------------
+
+
+ subroutine distaz (sta,sto,epa,epo,dk,dd,daze,dazs)
+
+ ! output: dk, dd -- distance in km and radians
+ ! daze, dazs -- azimuth and back-azimuth
+
+ real(kind=CUSTOM_REAL) :: sta, sto, epa, epo, dk, dd, daze, dazs
+
+ real(kind=CUSTOM_REAL) :: rad, sa, ea, ssa, csa, so, eo, sea, cea, ces, &
+ ses
+
+ rad=pi/180.0d0
+
+ sa = atan(.993270*tan(sta*rad))
+ ea = atan(.993270*tan(epa*rad))
+ ssa = sin(sa)
+ csa = cos(sa)
+ so = sto*rad
+ eo = epo*rad
+ sea = sin(ea)
+ cea = cos(ea)
+ ces = cos(eo-so)
+ ses = sin(eo-so)
+
+ if (sa==ea) then
+ if (sto==epo) then
+ dk =0.00
+ dd =0.00
+ daze=0.0
+ dazs=0.0
+ return
+ end if
+ end if
+
+ if (sta==90.) then
+ if (epa==90.0) then
+ dk =0.00
+ dd =0.00
+ daze=0.00
+ dazs=0.00
+ return
+ end if
+ end if
+
+ if (sta==-90.0) then
+ if (epa==-90.0) then
+ dk =0.00
+ dd =0.00
+ daze=0.00
+ dazs=0.00
+ return
+ end if
+ end if
+
+ dd = ssa*sea+csa*cea*ces
+ if (dd /=0.) dd=atan(sqrt(1.0-dd*dd)/dd)
+ if (dd==0.) dd=pi/2.0
+ if (dd<0.0) dd=dd+pi
+ dd = dd/rad
+ dk = dd*111.19
+
+ dazs = atan2(-ses,(ssa/csa*cea-sea*ces))
+ daze = atan2(ses,(sea*csa/cea-ssa*ces))
+ dazs = dazs/rad
+ daze = daze/rad
+ if (dazs<0.00) dazs=dazs+360.0
+ if (daze<0.00) daze=daze+360.0
+
+ end subroutine distaz
+
+! ---------------------------------------
+
+
+ subroutine latlon2norm(lats,lons,latr,lonr,xs,ys,zs,nx,ny,nz,xc,yc,zc)
+
+ ! [xs,ys,zs,nx,ny,nz] = latlon2norm(lats,lons,latr,lonr)
+ ! find out the coordinates of the source (xs,ys,zs)
+ ! the normal of the plane (nx,ny,nz)
+ ! the center of the source and receiver garc (xc,yc,zc)
+ ! constructed by (lons,lats), (lonr,latr), and the origin
+ ! for a "banana cross-section"
+
+ real(kind=CUSTOM_REAL) :: lats, lons, latr, lonr, xs, ys, zs, nx, ny, nz, xc, yc, zc
+
+ real(kind=CUSTOM_REAL) :: ts, ps, tr, pr, xr, yr, zr, nr
+
+ ts = (90 - lats) * pi/180
+ ps = lons * pi / 180
+ tr = (90 - latr) * pi/180
+ pr = lonr * pi / 180
+
+ call tp2xyz(ts,ps,xs,ys,zs)
+ call tp2xyz(tr,pr,xr,yr,zr)
+
+ nx = ys*zr - zs*yr
+ ny = -(xs*zr - zs*xr)
+ nz = xs*yr - ys*xr
+ nr = sqrt(nx*nx+ny*ny+nz*nz)
+ nx = nx/nr
+ ny = ny/nr
+ nz = nz/nr
+
+ xc=(xr+xs)/2
+ yc=(yr+ys)/2
+ zc=(zr+zs)/2
+
+ end subroutine latlon2norm
+
+ ! ---------------------------------------
+
+
+
+
+end module sub_slice_number
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/README.lyx
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/README.lyx (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/README.lyx 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,121 @@
+#LyX 1.5.2 created this file. For more info see http://www.lyx.org/
+\lyxformat 276
+\begin_document
+\begin_header
+\textclass article
+\language english
+\inputencoding auto
+\font_roman default
+\font_sans default
+\font_typewriter default
+\font_default_family default
+\font_sc false
+\font_osf false
+\font_sf_scale 100
+\font_tt_scale 100
+\graphics default
+\paperfontsize default
+\papersize default
+\use_geometry false
+\use_amsmath 2
+\use_esint 0
+\cite_engine basic
+\use_bibtopic false
+\paperorientation portrait
+\secnumdepth 3
+\tocdepth 3
+\paragraph_separation indent
+\defskip medskip
+\quotes_language english
+\papercolumns 1
+\papersides 1
+\paperpagestyle default
+\tracking_changes false
+\output_changes false
+\author ""
+\end_header
+
+\begin_body
+
+\begin_layout Standard
+This is a set of obsolete matlab scripts to calculate the slice numbers,
+ which have been replaced by much faster Fortran programs.
+ I leave them here because they can still be useful if you write matlab
+ scripts.
+\newline
+
+\end_layout
+
+\begin_layout Standard
+slice_number($elon,$elat,$slon,$slat,$nproc,[0 or 1])
+\end_layout
+
+\begin_layout Itemize
+elon,elat,slon,slat => normal plane -> rotation => new_elon, new_slon =>
+ lon_array along gcarc
+\end_layout
+
+\begin_layout Itemize
+for every point in the lon_array -> check for each chunk, the possible
+\begin_inset ERT
+status collapsed
+
+\begin_layout Standard
+
+$(
+\backslash
+xi,
+\backslash
+eta)$
+\end_layout
+
+\end_inset
+
+, and figure out the chunk number as well as the slice number => print out
+ the slice number
+\end_layout
+
+\begin_layout Itemize
+0 for minor arc, and 1 for major arc
+\end_layout
+
+\begin_layout Itemize
+use tp2norm(), norm_rot(), norm_rot_back(), tp2xyz(), chunk_map()
+\end_layout
+
+\begin_layout Itemize
+extra auxilliary functions:
+\end_layout
+
+\begin_deeper
+\begin_layout Itemize
+slice_number2(elon,elat,slon,slat,nproc,[0,1],lat0) -- get the slice number
+ for points on a 'belt' between source and receiver points.
+\end_layout
+
+\begin_layout Itemize
+[nx,ny,nz] = tp2norm2(ths,phs,thr,phr) to get the coordinates of the unit
+ normal vector
+\end_layout
+
+\begin_layout Itemize
+[th,ph] = xyz2tp(x,y,z)
+\end_layout
+
+\begin_layout Itemize
+[th,ph] = gcarc_station(lats,lons,latr,lonr,[0,1]) -- output stations with
+ 1 degree apart
+\end_layout
+
+\begin_layout Itemize
+[x,y,z] = xsection_translate(lats,lons,latr,lonr,[0,1],scale) -- to move
+ xsections up and down for S,P Kernels to be aligned on the same plot
+\end_layout
+
+\begin_layout Itemize
+new_array = compact_array(old_array) -- compacts an array by sorting and
+ removing the repeated entries
+\end_layout
+
+\end_body
+\end_document
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/README.pdf
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/README.pdf
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/chunk_map.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/chunk_map.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/chunk_map.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,36 @@
+function [xi,eta] = chunk_map(k,xx,yy,zz)
+% this program get the xi,eta for (xx,yy,zz)
+% point under the k'th chunk coordinate
+% transformation
+small = 1d-6;
+x = xx; y = yy; z = zz;
+if (x < small & x >= 0); x = small; end
+if (x > -small & x < 0); x = -small; end
+if (y < small & y >= 0); y = small; end
+if (y > -small & y < 0); y = -small; end
+if (z < small & z >= 0); z = small; end
+if (z > -small & z < 0); z = -small; end
+
+if k == 1 % CHUNK_AB
+ xi = atan(y/z); eta = atan(-x/z);
+ if (z < 0); xi = 10; end
+elseif k == 2 % CHUNK_AC
+ xi = atan(-z/y); eta = atan(x/y);
+ if (y > 0); xi = 10; end
+elseif k == 3 % CHUNK_BC
+ xi = atan(-z/x); eta = atan(-y/x);
+ if (x > 0); xi = 10; end
+elseif k == 4 % CHUNK_AC'
+ xi = atan(-z/y); eta = atan(-x/y);
+ if (y < 0); xi = 10; end
+elseif k == 5 % CHUNK_BC'
+ xi = atan(z/x); eta = atan(-y/x);
+ if (x < 0); xi = 10; end
+elseif k == 6 % CHUNK_AB'
+ xi = atan(y/z); eta = atan(x/z);
+ if (z > 0); xi = 10; end
+else
+ disp('k != 1 - 6');
+ return;
+end
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/compact_array.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/compact_array.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/compact_array.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,16 @@
+function new_array=compact_array(old_array)
+% this function compacts an old array to a new
+% array by sorting it and removing the repeated
+% entries
+
+temp = sort(old_array);
+for i = 1: length(temp)
+ if (i == 1)
+ new_array = [temp(1)];
+ else
+ if temp(i) ~= temp(i-1)
+ new_array = [new_array,temp(i)];
+ end
+ end
+end
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/distaz.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/distaz.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/distaz.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,62 @@
+
+function [dk,dd,daze,dazs]=distaz (sta,sto,epa,epo)
+ rad=pi/180.0d0;
+
+ sa = atan(.993270*tan(sta*rad));
+ ea = atan(.993270*tan(epa*rad));
+ ssa = sin(sa);
+ csa = cos(sa);
+ so = sto*rad;
+ eo = epo*rad;
+ sea = sin(ea);
+ cea = cos(ea);
+ ces = cos(eo-so);
+ ses = sin(eo-so);
+
+ if (sa==ea)
+ if (sto==epo)
+ dk =0.00;
+ dd =0.00;
+ daze=0.0;
+ dazs=0.0;
+ return
+ end
+end
+
+if sta==90.
+ if epa==90.0
+ dk =0.00;
+ dd =0.00;
+ daze=0.00;
+ dazs=0.00;
+ return
+ end
+end
+
+
+
+if sta==-90.0
+ if epa==-90.0
+ dk =0.00;
+ dd =0.00;
+ daze=0.00;
+ dazs=0.00;
+ return
+ end
+end
+ dd = ssa*sea+csa*cea*ces;
+ if dd~=0. , dd=atan(sqrt(1.0-dd*dd)/dd); end
+ if dd==0. , dd=pi/2.0; end
+ if dd<0.0 , dd=dd+pi; end
+ dd = dd/rad;
+ dk = dd*111.19;
+
+ dazs = atan2(-ses,(ssa/csa*cea-sea*ces));
+ daze = atan2(ses,(sea*csa/cea-ssa*ces));
+ dazs = dazs/rad;
+ daze = daze/rad;
+ if (dazs<0.00), dazs=dazs+360.0; end
+ if (daze<0.00), daze=daze+360.0; end
+
+
+return
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/gcarc_station.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/gcarc_station.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/gcarc_station.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,56 @@
+function [thp,php] = gcarc_station(lats,lons,latr,lonr,narc)
+% this function get the geographic coordinates for points along
+% the great circle path between the
+% source and receiver points in the 6-chunk global mesh
+% input: lats, lons, latr, lonr, nproc, narc
+% narc = 0 : minor arc
+% narc = 1 : major arc
+% output: thp(1:180), php(1:180), 1 degree apart
+
+
+%
+%clear all;
+%lats = -13.82; lons=-67.25;
+%latr = 18.79; lonr = 98.98;
+%nproc = 5;
+
+
+ths = (90-lats)/180.*pi; phs = lons/180.*pi;
+thr = (90-latr)/180.*pi; phr = lonr/180.*pi;
+
+[thn,phn] = tp2norm(ths,phs,thr,phr);
+[ths_new,phs_new] = norm_rot(thn,phn,ths,phs);
+[thr_new,phr_new] = norm_rot(thn,phn,thr,phr);
+
+if (ths_new-pi/2) > 1e-2
+ disp('new lat of source is not 0'); return;
+end
+if (thr_new-pi/2) > 1e-2
+ disp('new lat of receiver is not 0');return;
+end
+
+Np = 180;
+%phr_new = phs_new + pi - 0.001;
+pharray= sort([phs_new,phr_new]);
+ph1 = pharray(1); ph2 = pharray(2);
+delta = ph2-ph1;
+%disp(strcat('Delta = ',num2str(delta * 180/pi)));
+
+% we are looking at minor arc
+if (narc == 0)
+ if (delta < pi)
+ ph = linspace(ph1,ph2+pi,Np);
+ else
+ ph = linspace(ph2-2*pi,ph2-pi,Np);
+ end
+elseif (narc == 1)
+ if (delta < pi)
+ ph = linspace(ph2-2*pi,ph2-pi,Np);
+ else
+ ph = linspace(ph1,ph1+pi,Np);
+ end
+end
+
+for i = 1 : Np
+ [thp(i),php(i)] = norm_rot_back(thn,phn,pi/2.,ph(i));
+end
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/norm_rot.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/norm_rot.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/norm_rot.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,14 @@
+function [th_new,ph_new] = norm_rot(thn,phn,th,ph)
+% coordinates change from (th,ph) to (th_new,ph_new)
+% according to a rotation that converts (thn,phn) to
+% z axis
+
+rot=[cos(thn)*cos(phn),cos(thn)*sin(phn),-sin(thn);
+ -sin(phn),cos(phn),0;
+ sin(thn)*cos(phn),sin(thn)*sin(phn),cos(thn)];
+[x,y,z] = tp2xyz(th,ph);
+temp=rot * [x,y,z]';
+x_new = temp(1); y_new = temp(2); z_new = temp(3);
+[th_new,ph_new] = xyz2tp(x_new,y_new,z_new);
+
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/norm_rot_back.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/norm_rot_back.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/norm_rot_back.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,13 @@
+function [th_old,ph_old] = norm_rot_back(thn,phn,th,ph)
+% coordinates change from (th_old,ph_old) to (th,ph)
+% according to a rotation that converts (thn,phn) to
+% z axis
+
+rot=[cos(thn)*cos(phn),cos(thn)*sin(phn),-sin(thn);
+ -sin(phn),cos(phn),0;
+ sin(thn)*cos(phn),sin(thn)*sin(phn),cos(thn)];
+[x,y,z] = tp2xyz(th,ph);
+temp=rot' * [x,y,z]';
+x_old = temp(1); y_old = temp(2); z_old = temp(3);
+[th_old,ph_old] = xyz2tp(x_old,y_old,z_old);
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/normal_plane.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/normal_plane.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/normal_plane.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,20 @@
+function [xs,ys,zs,nx,ny,nz] = tp2norm(lats,lons,latr,lonr)
+% find out the coordinates of the source (xs,ys,zs)
+% the normal of the plane (nx,ny,nz)
+% constructed by (ths,phs), (thr,phr), and the origin
+% for a "banana cross-section"
+
+ts = (90 - lats) * pi/180;
+ps = lons * pi / 180;
+tr = (90 - latr) * pi/180;
+pr = lonr * pi / 180;
+
+[xs,ys,zs] = tp2xyz(ts,ps);
+[xr,yr,zr] = tp2xyz(tr,pr);
+nx = ys*zr - zs*yr;
+ny = -(xs*zr - zs*xr);
+nz = xs*yr - ys*xr;
+nr = sqrt(nx*nx+ny*ny+nz*nz);
+nx = nx/nr;
+ny = ny/nr;
+nz = nz/nr;
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/normal_plane_orth.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/normal_plane_orth.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/normal_plane_orth.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,25 @@
+function [xc,yc,zc,nx,ny,nz] = normal_plane_orth(lats,lons,latr,lonr)
+% find out the coord (xc,yc,zc) of the center of the vector source-receiver
+% and the normalised coordinates (nx,ny,nz) of this vector
+% for a "doughnut cross-section"
+
+ts = (90 - lats) * pi/180;
+ps = lons * pi / 180;
+tr = (90 - latr) * pi/180;
+pr = lonr * pi / 180;
+
+[xs,ys,zs] = tp2xyz(ts,ps);
+[xr,yr,zr] = tp2xyz(tr,pr);
+
+nx=xr-xs;
+ny=yr-ys;
+nz=zr-zs;
+nr=sqrt(nx*nx+ny*ny+nz*nz);
+nx = nx/nr;
+ny = ny/nr;
+nz = nz/nr;
+
+xc=(xr+xs)/2;
+yc=(yr+ys)/2;
+zc=(zr+zs)/2;
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/rotmat.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/rotmat.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/rotmat.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,28 @@
+function rotation_matrix = rotmat(clon,clat,grot)
+% this function calculate the 3x3 rotation matrix from the AB chunk
+% frame to the actual frame defined by (clon,clat,grot)
+
+% compute colatitude and longitude and convert to radians
+ DEGREES_TO_RADIANS = pi / 180.0;
+ alpha = clon * DEGREES_TO_RADIANS;
+ beta = (90.00 - clat) * DEGREES_TO_RADIANS;
+ gamma = grot * DEGREES_TO_RADIANS;
+
+ sina = sin(alpha);
+ cosa = cos(alpha);
+ sinb = sin(beta);
+ cosb = cos(beta);
+ sing = sin(gamma);
+ cosg = cos(gamma);
+
+% define rotation matrix
+ rotation_matrix(1,1) = cosg*cosb*cosa-sing*sina;
+ rotation_matrix(1,2) = -sing*cosb*cosa-cosg*sina;
+ rotation_matrix(1,3) = sinb*cosa;
+ rotation_matrix(2,1) = cosg*cosb*sina+sing*cosa;
+ rotation_matrix(2,2) = -sing*cosb*sina+cosg*cosa;
+ rotation_matrix(2,3) = sinb*sina;
+ rotation_matrix(3,1) = -cosg*sinb;
+ rotation_matrix(3,2) = sing*sinb;
+ rotation_matrix(3,3) = cosb;
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/slice_number.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/slice_number.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/slice_number.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,116 @@
+function slices = slice_number(lats,lons,latr,lonr,nproc,narc,nchunks,xi_width,eta_width,clon,clat,grot)
+% this function get the slice number between
+% source and receiver points in the 6-chunk global mesh
+% input: lats, lons, latr, lonr, nproc, narc
+% narc = 0 : minor arc
+% narc = 1 : major arc
+% for 1-chunk or 2-chunk mesh, also need input:
+% nchunks, xi_width, eta_width, clon, clat, grot,
+%
+% output: slice numbers
+
+
+%
+%clear all;
+%lats = -13.82; lons=-67.25;
+%latr = 18.79; lonr = 98.98;
+%nproc = 5;
+
+if (nargin ~= 6 && nargin ~= 12)
+ disp('Number of arguments for slice_number should be either 6 or 12');
+ return
+end
+
+if (nargin == 12 && nchunks > 1 && nproc ~= nproc_eta)
+ disp('Number of processors in xi and eta directions need to be the same for nchunks > 1');
+ return
+end
+
+ths = (90-lats)/180.*pi; phs = lons/180.*pi;
+thr = (90-latr)/180.*pi; phr = lonr/180.*pi;
+xi_width = xi_width/180.*pi;
+eta_width = eta_width/180.*pi;
+
+[thn,phn] = tp2norm(ths,phs,thr,phr);
+[ths_new,phs_new] = norm_rot(thn,phn,ths,phs);
+[thr_new,phr_new] = norm_rot(thn,phn,thr,phr);
+
+
+if (ths_new-pi/2) > 1e-2
+ disp('new lat of source is not 0'); return;
+end
+if (thr_new-pi/2) > 1e-2
+ disp('new lat of receiver is not 0');return;
+end
+
+Np = 180;
+%phr_new = phs_new + pi - 0.001;
+pharray= sort([phs_new,phr_new]);
+ph1 = pharray(1); ph2 = pharray(2);
+delta = ph2-ph1;
+%disp(strcat('Delta = ',num2str(delta * 180/pi)));
+
+% we are looking at minor arc
+if (narc == 0)
+ if (delta < pi)
+ ph = linspace(ph1,ph2,Np);
+ else
+ ph = linspace(ph2-2*pi,ph1,Np);
+ end
+elseif (narc == 1)
+ if (delta < pi)
+ ph = linspace(ph2-2*pi,ph1,Np);
+ else
+ ph = linspace(ph1,ph2,Np);
+ end
+end
+
+% calculate the rotation matrix from CHUNK_AB frame to the actual frame
+if (nargin == 12); rotation_matrix = rotmat(clon,clat,grot); end
+if (nargin == 6); nchunks = 6; xi_width = pi/2; yi_width = pi/2; end
+
+% initialize
+chunk(1:Np) = 10;
+long_slice=[];
+
+for i = 1:Np
+ [thp(i),php(i)] = norm_rot_back(thn,phn,pi/2.,ph(i));
+ [x,y,z] = tp2xyz(thp(i),php(i));
+
+% rotate the points between source and receiver to CHUNK_AB standard coordinates
+ if (nargin == 12)
+ temp = [x,y,z] * rotation_matrix;
+ x=temp(1); y=temp(2); z=temp(3);
+ end
+
+ for k = 1: nchunks
+ [xik,etak] = chunk_map(k,x,y,z);
+ %[i,k,xik,etak]
+ if (abs(xik) <= pi/4 && abs(etak) <= pi/4)
+ chunk(i) = k;
+ xi(i) = xik; eta(i) = etak;
+ end
+ end
+% check chunk number
+ if nargin == 12 && (chunk(i) > nchunks || abs(xi(i)) > xi_width/2 || abs(eta(i)) > eta_width/2)
+ disp('Check if point ',num2str(x),',',num2str(y),',',num2str(z),' is within the region or not');return;
+ end
+
+ xi1 = xi(i) / xi_width * 2; eta1 = eta(i) / eta_width * 2;
+ nproc_xi(i) = floor((xi1+1)/2 * nproc);
+ nproc_eta(i) = floor((eta1+1)/2 * nproc);
+ slice(i) = nproc * nproc * (chunk(i) - 1) + nproc * nproc_eta(i) + nproc_xi(i);
+ info(i,:) = [chunk(i),nproc_xi(i),nproc_eta(i),slice(i),thp(i)*180/pi,php(i)*180/pi,xi(i),eta(i)];
+ long_slice = [long_slice;slice(i)];
+end
+
+slices = compact_array(long_slice);
+%[thp',php'] * 180/pi
+slices=slices';
+
+
+
+
+
+
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/slice_number2.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/slice_number2.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/slice_number2.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,123 @@
+function slices = slice_number2(lats,lons,latr,lonr,nproc,narc,lat0,nchunks,xi_width,eta_width,clon,clat,grot)
+% this function get the slice number for a width 'lat0' belt between
+% source and receiver points in the global mesh
+% input: lats, lons, latr, lonr, nproc, narc
+% narc = 0 : minor arc
+% narc = 1 : major arc
+% lat0 : the width of the belt
+% for 1-chunk or 2-chunk mesh, also need input:
+% nchunks, xi_width, eta_width, clon, clat, grot
+%
+% output: slice numbers
+
+
+%
+%clear all;
+%lats = -13.82; lons=-67.25;
+%latr = 18.79; lonr = 98.98;
+%nproc = 5;
+
+if (nargin ~= 7 && nargin ~= 13)
+ disp('Number of arguments for slice_number should be either 6 or 12');
+ return
+end
+
+if (nargin == 13 && nchunks > 1 && nproc ~= nproc_eta)
+ disp('Number of processors in xi and eta directions need to be the same for nchunks > 1');
+ return
+end
+
+ths = (90-lats)/180.*pi; phs = lons/180.*pi;
+thr = (90-latr)/180.*pi; phr = lonr/180.*pi;
+xi_width = xi_width/180.*pi;
+eta_width = eta_width/180.*pi;
+
+[thn,phn] = tp2norm(ths,phs,thr,phr);
+[ths_new,phs_new] = norm_rot(thn,phn,ths,phs);
+[thr_new,phr_new] = norm_rot(thn,phn,thr,phr);
+
+
+if (ths_new-pi/2) > 1e-2
+ disp('new lat of source is not 0'); return;
+end
+if (thr_new-pi/2) > 1e-2
+ disp('new lat of receiver is not 0');return;
+end
+
+Np = 180;
+%phr_new = phs_new + pi - 0.001;
+pharray= sort([phs_new,phr_new]);
+ph1 = pharray(1); ph2 = pharray(2);
+delta = ph2-ph1;
+%disp(strcat('Delta = ',num2str(delta * 180/pi)));
+
+% we are looking at minor arc
+if (narc == 0)
+ if (delta < pi)
+ ph = linspace(ph1,ph2,Np);
+ else
+ ph = linspace(ph2-2*pi,ph1,Np);
+ end
+elseif (narc == 1)
+ if (delta < pi)
+ ph = linspace(ph2-2*pi,ph1,Np);
+ else
+ ph = linspace(ph1,ph2,Np);
+ end
+end
+
+% calculate the rotation matrix from CHUNK_AB frame to the actual frame
+if (nargin == 13); rotation_matrix = rotmat(clon,clat,grot); end
+if (nargin == 7); nchunks = 6; xi_width = pi/2; yi_width = pi/2; end
+
+% initialize
+chunk(1:Np) = 10;
+long_slice=[];
+
+Nt = 11;
+th0 = lat0 * pi/180;
+th = linspace(-th0,th0,Nt);
+
+for ii = 1 : Nt
+for i = 1 : Np
+ [thp(i),php(i)] = norm_rot_back(thn,phn,pi/2+th(ii),ph(i));
+ [x,y,z] = tp2xyz(thp(i),php(i));
+
+% rotate the points between source and receiver to CHUNK_AB standard coordinates
+ if (nargin == 13)
+ temp = [x,y,z] * rotation_matrix;
+ x=temp(1); y=temp(2); z=temp(3);
+ end
+
+ for k = 1: 6
+ [xik,etak] = chunk_map(k,x,y,z);
+ %[i,k,xik,etak]
+ if (abs(xik) <= pi/4 && abs(etak) <= pi/4)
+ chunk(i) = k;
+ xi(i) = xik; eta(i) = etak;
+ end
+ end
+% check chunk number
+ if nargin == 12 && (chunk(i) > nchunks || abs(xi(i)) > xi_width/2 || abs(eta(i)) > eta_width/2)
+ continue;
+ end
+
+ xi1 = xi(i) / xi_width * 2; eta1 = eta(i) / eta_width * 2;
+ nproc_xi(i) = floor((xi1+1)/2 * nproc);
+ nproc_eta(i) = floor((eta1+1)/2 * nproc);
+ slice(i) = nproc * nproc * (chunk(i) - 1) + nproc * nproc_eta(i) + nproc_xi(i);
+ info(i,:) = [chunk(i),nproc_xi(i),nproc_eta(i),slice(i),thp(i)*180/pi,php(i)*180/pi,xi(i),eta(i)];
+ long_slice = [long_slice;slice(i)];
+end
+end
+
+slices = compact_array(long_slice);
+
+slices=slices';
+
+
+
+
+
+
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2norm.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2norm.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2norm.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,13 @@
+function [thn,phn] = tp2norm(ths,phs,thr,phr)
+% find out the normal of the plane constructed
+% by (ths,phs), (thr,phr), and the origin using
+% cross-product.
+
+[xs,ys,zs] = tp2xyz(ths,phs);
+[xr,yr,zr] = tp2xyz(thr,phr);
+nx = ys*zr - zs*yr;
+ny = -(xs*zr - zs*xr);
+nz = xs*yr - ys*xr;
+
+[thn,phn] = xyz2tp(nx,ny,nz);
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2norm2.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2norm2.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2norm2.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,14 @@
+function [nx,ny,nz] = tp2norm(ths,phs,thr,phr)
+% find out the normal of the plane (nx,ny,nz)
+% constructed by (ths,phs), (thr,phr), and the origin.
+
+[xs,ys,zs] = tp2xyz(ths,phs);
+[xr,yr,zr] = tp2xyz(thr,phr);
+nx = ys*zr - zs*yr;
+ny = -(xs*zr - zs*xr);
+nz = xs*yr - ys*xr;
+nr = sqrt(nx*nx+ny*ny+nz*nz);
+nx = nx/nr;
+ny = ny/nr;
+nz = nz/nr;
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2xyz.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2xyz.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/tp2xyz.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,5 @@
+function [x,y,z] = tp2xyz(th,ph)
+% convert (th,ph) to (x,y,z) on unit sphere
+x = sin(th) * cos(ph);
+y = sin(th) * sin(ph);
+z = cos(th);
\ No newline at end of file
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/xsection_translate.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/xsection_translate.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/xsection_translate.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,44 @@
+function [x,y,z] = xsection_translate(lats,lons,latr,lonr,narc,scale)
+% this function figures out the x,y,z values for a translation within
+% the source receiver cross-section with certain scale
+
+ths = (90-lats)/180.*pi; phs = lons/180.*pi;
+thr = (90-latr)/180.*pi; phr = lonr/180.*pi;
+
+[thn,phn] = tp2norm(ths,phs,thr,phr);
+[ths_new,phs_new] = norm_rot(thn,phn,ths,phs);
+[thr_new,phr_new] = norm_rot(thn,phn,thr,phr);
+
+if (ths_new-pi/2) > 1e-2
+ disp('new lat of source is not 0'); return;
+end
+if (thr_new-pi/2) > 1e-2
+ disp('new lat of receiver is not 0');return;
+end
+
+%phr_new = phs_new + pi - 0.001;
+pharray= sort([phs_new,phr_new]);
+ph1 = pharray(1); ph2 = pharray(2);
+delta = ph2-ph1;
+%disp(strcat('Delta = ',num2str(delta * 180/pi)));
+
+% we are looking at minor arc
+if (narc == 0)
+ if (delta < pi)
+ ph = (ph1+ph2+pi)/2;
+ else
+ ph = (ph2-2*pi+ph2-pi)/2;
+ end
+elseif (narc == 1)
+ if (delta < pi)
+ ph = (ph2-2*pi+ph2-pi)/2;
+ else
+ ph = (ph1+ph1+pi)/2;
+ end
+end
+
+[thp,php] = norm_rot_back(thn,phn,pi/2.,ph);
+[x,y,z] = tp2xyz(thp,php);
+x = x*scale;
+y = y*scale;
+z = z*scale;
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/xyz2tp.m
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/xyz2tp.m (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/matlab/xyz2tp.m 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,11 @@
+function [th,ph] = xyz2tp(x,y,z)
+% convert x,y,z to a point on unit sphere
+
+ph = atan2(y,x);
+th = atan2(sqrt(x*x+y*y),z);
+if (th < 0)
+ th = th + pi;
+end
+if (ph < 0)
+ ph = ph + 2*pi;
+end
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/Makefile
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/Makefile (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/Makefile 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,29 @@
+
+CXX=g++
+VTK=/opt/seismo-util
+INCLUDES=-I$(VTK)/include
+CPPFLAGS=$(INCLUDES) -Wno-deprecated
+LIBS=-L$(VTK)/lib/vtk -lvtkCommon -lvtkIO -lvtkRendering -lvtkFiltering -lvtkGraphics
+
+all: mesh2vtu ugrid ugrid_pts
+
+mesh2vtu: mesh2vtu.o
+ $(CXX) $(CPPFLAGS) -o mesh2vtu mesh2vtu.o $(LIBS)
+
+mesh2vtu.o: mesh2vtu.cxx
+ $(CXX) $(CPPFLAGS) -c mesh2vtu.cxx -o mesh2vtu.o
+
+ugrid: ugrid.o
+ $(CXX) $(CPPFLAGS) -o ugrid ugrid.o $(LIBS)
+
+ugrid.o: ugrid.cxx
+ $(CXX) $(CPPFLAGS) -c ugrid.cxx -o ugrid.o
+
+ugrid_pts: ugrid_pts.o
+ $(CXX) $(CPPFLAGS) -o ugrid_pts ugrid_pts.o $(LIBS)
+
+ugrid_pts.o: ugrid_pts.cxx
+ $(CXX) $(CPPFLAGS) -c ugrid_pts.cxx -o ugrid_pts.o
+
+clean:
+ rm -f mesh2vtu cell2vtu ugrid ugrid_pts *.o *~ core
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/cell2vtu.cxx
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/cell2vtu.cxx (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/cell2vtu.cxx 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,139 @@
+//-----------------------------------------------------------------------------
+// Program: cell2vtu
+// Description: Converts x, y, z, s points to VTK XML Unstructured Grid
+// using definition of cells
+// File: cell2vtu.cxx
+// Author: Nicholas Schwarz, schwarz at evl.uic.edu
+// Electronic Visualization Laboratory
+// University of Illinois at Chicago
+// - wrote ugrid and introduced vtk to Seismo Lab, Caltech
+//
+// Brian Savage savage13 at gps.caltech.edu
+// California Institute of Technology
+// Geologial and Planetary Sciences
+//
+// Input: in binary
+// integer number of points
+// 3 floats (x,y,z) point 0
+// ...
+// 3 floats (x,y,z) point n-1
+// integer number of cells
+// 8 integers, 1 float (1-8) cell 0, scalar
+// ... define a hexahedron of 8 points and corresponding scalar
+// 8 integers, 1 float (1-8) cell n-1, scalar
+//
+// Date: 4 June 2004 ver 1.0 (was ugrid)
+// - original version, only read in x,y,z,s points
+// 25 June 2004 ver 2.0 (cell2vtu)
+// - reads in cell definition
+// - input is done in binary
+//
+//-----------------------------------------------------------------------------
+
+#include <stdio.h>
+#include <sys/types.h>
+#include <sys/stat.h>
+#include <fcntl.h>
+#include <unistd.h>
+
+#include <vtk/vtkFloatArray.h>
+#include <vtk/vtkPoints.h>
+#include <vtk/vtkCellData.h>
+#include <vtk/vtkUnstructuredGrid.h>
+#include <vtk/vtkXMLUnstructuredGridWriter.h>
+#include <vtk/vtkUnstructuredGridToPolyDataFilter.h>
+#include <vtk/vtkXMLPolyDataWriter.h>
+#include <vtk/vtkUnstructuredGridToPolyDataFilter.h>
+#include <vtk/vtkDelaunay3D.h>
+#include <vtk/vtkCellArray.h>
+#include <vtk/vtkPointSet.h>
+#include <vtk/vtkHexahedron.h>
+
+
+int main(int argc, char** argv) {
+
+ if (argc < 3) {
+ printf("Usage: ugrid input_file output_file\n");
+ return 0;
+ }
+
+ float xyz[3];
+ int cell[8];
+ FILE *file;
+ int i, j;
+ int npts, ncells;
+ int pid[8];
+
+ int fd;
+
+ if((fd = open(argv[1], O_RDONLY)) == -1) {
+ printf("Error opening file: %s.\n", argv[1]);
+ return 0;
+ }
+
+ if(read(fd, &npts, sizeof(int)) != sizeof(int)) {
+ printf("Bad read on file (in points): %s\n", argv[1]);
+ }
+
+ vtkUnstructuredGrid *dataSet = vtkUnstructuredGrid::New();
+ float *xV = new float[npts];
+ float *yV = new float[npts];
+ float *zV = new float[npts];
+ vtkPoints *newPts = vtkPoints::New();
+ vtkFloatArray *newScalars = vtkFloatArray::New();
+ printf("cell2vtu: Reading in points: %d\n", npts);
+ for (i = 0 ; i < npts ; i++)
+ {
+ read(fd, &xV[i], sizeof(float));
+ read(fd, &yV[i], sizeof(float));
+ read(fd, &zV[i], sizeof(float));
+ xyz[0] = xV[i];
+ xyz[1] = yV[i];
+ xyz[2] = zV[i];
+ newPts -> InsertPoint(i, xyz);
+ }
+
+ vtkCellArray *cells = vtkCellArray::New();
+ if(read(fd, &ncells, sizeof(int)) != sizeof(int)) {
+ printf("Bad read on file (in cells): %s\n", argv[1]);
+ }
+ printf("cell2vtu: Reading in cells: %d\n", ncells);
+ float *sV = new float[ncells];
+ int *cellTypes = new int[ncells];
+ vtkHexahedron *hex = vtkHexahedron::New();
+
+ hex->GetPointIds()->SetNumberOfIds(8);
+
+ for(i = 0; i < ncells; i++) {
+ for(j = 0; j < 8; j++) {
+ read(fd, &cell[j], sizeof(int));
+ hex->GetPointIds()->SetId(j,cell[j]);
+ }
+ cells->InsertNextCell(hex);
+ cellTypes[i] = hex->GetCellType();
+ read(fd, &sV[i], sizeof(float));
+ newScalars -> InsertValue(i, sV[i]);
+ }
+
+ close(fd);
+
+ dataSet -> SetPoints(newPts);
+ dataSet -> SetCells(cellTypes, cells);
+ dataSet -> GetCellData() -> SetScalars(newScalars);
+
+ vtkXMLUnstructuredGridWriter* writer = vtkXMLUnstructuredGridWriter::New();
+ writer -> SetInput(dataSet);
+ writer -> SetFileName(argv[2]);
+ writer -> Write();
+
+ writer -> Delete();
+ newPts -> Delete();
+ newScalars -> Delete();
+ dataSet -> Delete();
+ cells -> Delete();
+
+ // printf("Done.\n");
+
+ return 0;
+
+}
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/cell2vtu.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/cell2vtu.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/cell2vtu.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,52 @@
+#!/usr/bin/perl
+
+use Getopt::Std;
+use File::Basename;
+
+$progname = basename($0);
+$cell2vtu = "/opt/seismo-util/source/cell2vtu/cell2vtu";
+$REQLIBS = "env LD_LIBRARY_PATH=/opt/seismo-util/lib/vtk";
+
+sub Usage {
+ print STDERR <<END;
+Usage: $progname -i input-file -o output-file
+ Takes an input file (binary) with a number of points and a number of cells
+ and transforms them into an unstructured grid file
+
+ -i input-file (Binary file)
+ -o output-file (XML Unstructured Grid File)
+
+ Input Binary files have this structure:
+ number_of_points integer (4 bytes)
+ x_1, y_1, z_1 3 reals (4 bytes each)
+ ...
+ x_n, y_n, z_n 3 reals (4 bytes each)
+ number_of_cells integer (4 bytes)
+ cell_1 (eight points), scalar_1 8 integers (4 bytes each), 1 real (4 bytes)
+ ...
+ cell_n, scalar_n 8 integers (4 bytes each), 1 real (4 bytes)
+
+ This is a wrapper around cell2vtu
+
+ Brian Savage 6/26/2004
+
+END
+ exit(-1);
+}
+
+if(@ARGV == 0) {
+ Usage ();
+}
+
+if(!getopts('i:o:')){die "Check input paramaters \n";}
+
+if(!defined($opt_i)) {
+ die "$progname: Must specify input file -i input-file\n";
+}
+if(!defined($opt_o)) {
+ die "$progname: Must specify output file -o output-file\n";
+}
+#print "$REQLIBS $cell2vtu $opt_i $opt_o\n";
+system("$REQLIBS $cell2vtu $opt_i $opt_o");
+
+1;
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/cell2vtu.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/century2xyz.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/century2xyz.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/century2xyz.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,33 @@
+#!/usr/bin/perl
+
+use POSIX;
+
+open(FILE, "century.llrm");
+ at lines = <FILE>;
+close(FILE);
+print @lines . "\n";
+foreach $line (@lines) {
+ ($lat,$lon,$depth,$mag) = split(/\s+/,$line);
+ @pt = lat_lon_depth_2_xyz($lat, $lon, $depth);
+ print "@pt $depth\n";
+}
+
+sub lat_lon_depth_2_xyz {
+ my($lat, $lon, $depth) = @_;
+ my($PI, $D2R, $theta, $phi, $r0, $r, $x, $y, $z);
+
+ $R_EARTH_KM = 6371.0;
+ $PI = 3.141592653589793;
+ $D2R = $PI/180.0;
+
+ $theta = ($PI/2.0) - atan(0.99329534*tan($lat*$D2R));
+ $phi = $lon * $D2R;
+ $r0 = 1.0;
+
+ $r = ($R_EARTH_KM - $depth) / $R_EARTH_KM;
+ $x = $r * sin($theta) * cos($phi);
+ $y = $r * sin($theta) * sin($phi);
+ $z = $r * cos($theta);
+ return($x, $y, $z);
+}
+
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/century2xyz.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/mesh2vtu.cxx
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/mesh2vtu.cxx (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/mesh2vtu.cxx 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,139 @@
+//-----------------------------------------------------------------------------
+// Program: mesh2vtu
+// Description: Converts x, y, z, s points to VTK XML Unstructured Grid
+// using definition of cells
+// File: mesh2vtu.cxx
+// Author: Nicholas Schwarz, schwarz at evl.uic.edu
+// Electronic Visualization Laboratory
+// University of Illinois at Chicago
+// - wrote ugrid and introduced vtk to Seismo Lab, Caltech
+//
+// Brian Savage savage13 at gps.caltech.edu
+// California Institute of Technology
+// Geologial and Planetary Sciences
+//
+// Input: in binary
+// integer number of points
+// 4 floats (x,y,z,s) point 0
+// ...
+// 4 floats (x,y,z,s) point n-1
+// integer number of cells
+// 8 integers (1-8) cell 0
+// ... define a hexahedron of 8 points
+// 8 integers (1-8) cell n-1
+//
+// Date: 4 June 2004 ver 1.0 (was ugrid)
+// - original version, only read in x,y,z,s points
+// 25 June 2004 ver 2.0 (mesh2vtu)
+// - reads in cell definition
+// - input is done in binary
+//
+//-----------------------------------------------------------------------------
+
+#include <stdio.h>
+#include <sys/types.h>
+#include <sys/stat.h>
+#include <fcntl.h>
+#include <unistd.h>
+
+#include <vtk/vtkFloatArray.h>
+#include <vtk/vtkPoints.h>
+#include <vtk/vtkPointData.h>
+#include <vtk/vtkUnstructuredGrid.h>
+#include <vtk/vtkXMLUnstructuredGridWriter.h>
+#include <vtk/vtkUnstructuredGridToPolyDataFilter.h>
+#include <vtk/vtkXMLPolyDataWriter.h>
+#include <vtk/vtkUnstructuredGridToPolyDataFilter.h>
+#include <vtk/vtkDelaunay3D.h>
+#include <vtk/vtkCellArray.h>
+#include <vtk/vtkPointSet.h>
+#include <vtk/vtkHexahedron.h>
+
+
+int main(int argc, char** argv) {
+
+ if (argc < 3) {
+ printf("Usage: ugrid input_file output_file\n");
+ return 0;
+ }
+
+ float xyz[3];
+ int cell[8];
+ FILE *file;
+ int i, j;
+ int npts, ncells;
+ int pid[8];
+
+ int fd;
+
+ if((fd = open(argv[1], O_RDONLY)) == -1) {
+ printf("Error opening file: %s.\n", argv[1]);
+ return 0;
+ }
+
+ if(read(fd, &npts, sizeof(int)) != sizeof(int)) {
+ printf("Bad read on file (in points): %s\n", argv[1]);
+ }
+
+ vtkUnstructuredGrid *dataSet = vtkUnstructuredGrid::New();
+ float *xV = new float[npts];
+ float *yV = new float[npts];
+ float *zV = new float[npts];
+ float *sV = new float[npts];
+
+ vtkPoints *newPts = vtkPoints::New();
+ vtkFloatArray *newScalars = vtkFloatArray::New();
+ printf("mesh2vtu: Reading in points: %d\n", npts);
+ for (i = 0 ; i < npts ; i++)
+ {
+ read(fd, &xV[i], sizeof(float));
+ read(fd, &yV[i], sizeof(float));
+ read(fd, &zV[i], sizeof(float));
+ read(fd, &sV[i], sizeof(float));
+ xyz[0] = xV[i];
+ xyz[1] = yV[i];
+ xyz[2] = zV[i];
+ newPts -> InsertPoint(i, xyz);
+ newScalars -> InsertValue(i, sV[i]);
+ }
+
+ vtkCellArray *cells = vtkCellArray::New();
+ if(read(fd, &ncells, sizeof(int)) != sizeof(int)) {
+ printf("Bad read on file (in cells): %s\n", argv[1]);
+ }
+ printf("mesh2vtu: Reading in cells: %d\n", ncells);
+ int *cellTypes = new int[ncells];
+ vtkHexahedron *hex = vtkHexahedron::New();
+ hex->GetPointIds()->SetNumberOfIds(8);
+
+ for(i = 0; i < ncells; i++) {
+ for(j = 0; j < 8; j++) {
+ read(fd, &cell[j], sizeof(int));
+ hex->GetPointIds()->SetId(j,cell[j]);
+ }
+ cells->InsertNextCell(hex);
+ cellTypes[i] = hex->GetCellType();
+ }
+
+ close(fd);
+
+ dataSet -> SetPoints(newPts);
+ dataSet -> GetPointData() -> SetScalars(newScalars);
+ dataSet -> SetCells(cellTypes, cells);
+
+ vtkXMLUnstructuredGridWriter* writer = vtkXMLUnstructuredGridWriter::New();
+ writer -> SetInput(dataSet);
+ writer -> SetFileName(argv[2]);
+ writer -> Write();
+
+ writer -> Delete();
+ newPts -> Delete();
+ newScalars -> Delete();
+ dataSet -> Delete();
+ cells -> Delete();
+
+ // printf("Done.\n");
+
+ return 0;
+
+}
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/mesh2vtu.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/mesh2vtu.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/mesh2vtu.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,52 @@
+#!/usr/bin/perl
+
+use Getopt::Std;
+use File::Basename;
+
+$progname = basename($0);
+$mesh2vtu = "/opt/seismo-util/source/mesh2vtu/mesh2vtu";
+$REQLIBS = "env LD_LIBRARY_PATH=/opt/seismo-util/lib/vtk";
+
+sub Usage {
+ print STDERR <<END;
+Usage: $progname -i input-file -o output-file
+ Takes an input file (binary) with a number of points and a number of cells
+ and transforms them into an unstructured grid file
+
+ -i input-file (Binary file)
+ -o output-file (XML Unstructured Grid File)
+
+ Input Binary files have this structure:
+ number_of_points integer (4 bytes)
+ x_1, y_1, z_1, scalar_1 4 reals (4 bytes each)
+ ...
+ x_n, y_n, z_n, scalar_n 4 reals (4 bytes each)
+ number_of_cells integer (4 bytes)
+ cell_1 (eight points) 8 integers (4 bytes each)
+ ...
+ cell_n 8 integers (4 bytes each)
+
+ This is a wrapper around mesh2vtu
+
+ Brian Savage 6/26/2004
+
+END
+ exit(-1);
+}
+
+if(@ARGV == 0) {
+ Usage ();
+}
+
+if(!getopts('i:o:')){die "Check input paramaters \n";}
+
+if(!defined($opt_i)) {
+ die "$progname: Must specify input file -i input-file\n";
+}
+if(!defined($opt_o)) {
+ die "$progname: Must specify output file -o output-file\n";
+}
+#print "$REQLIBS $mesh2vtu $opt_i $opt_o\n";
+system("$REQLIBS $mesh2vtu $opt_i $opt_o");
+
+1;
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/mesh2vtu.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/points2vtu.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/points2vtu.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/points2vtu.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,86 @@
+#!/usr/bin/perl
+
+use Getopt::Std;
+use File::Basename;
+use POSIX;
+
+$progname = basename($0);
+$ugrid = "/opt/seismo-util/source/mesh2vtu/ugrid_pts";
+$REQLIBS = "env LD_LIBRARY_PATH=/opt/seismo-util/lib/vtk";
+
+sub Usage {
+ print STDERR <<END;
+Usage: $progname -i input-file -o output-file
+ Takes an input file (ascii) with a number of points
+ and transforms them into an unstructured grid file
+
+ -i input-file (ascii file)
+ -o output-file (XML Unstructured Grid File)
+ -L - input is in lon lat depth scalar
+
+ Input ascii files have this structure:
+ number_of_points
+ x_1 y_1 z_1 scalar_1
+ ...
+ x_n y_n z_n scalar_n
+
+ This is a wrapper around $ugrid
+
+ Brian Savage 6/26/2004
+
+END
+ exit(-1);
+}
+
+if(@ARGV == 0) {
+ Usage ();
+}
+
+if(!getopts('i:o:L')){die "Check input paramaters \n";}
+
+if(!defined($opt_i)) {
+ die "$progname: Must specify input file -i input-file\n";
+}
+if(!defined($opt_o)) {
+ die "$progname: Must specify output file -o output-file\n";
+}
+#print "$REQLIBS $ugrid $opt_i $opt_o\n";
+if($opt_L){
+ open(FILE, "$opt_i");
+ @lines = <FILE>;
+ close(FILE);
+ print "Converting to xyzm\n";
+ open(OUT,">points2vtu.tempfile");
+ # print @lines . "\n";
+ print OUT "@lines[0]";
+ foreach $line (@lines[1..$#lines]) {
+ ($lon,$lat,$depth,$mag) = split(/\s+/,$line);
+ @pt = lat_lon_depth_2_xyz($lat, $lon, $depth);
+ print OUT "@pt $mag\n";
+ }
+ print "Running ugrid\n";
+ system("$REQLIBS $ugrid points2vtu.tempfile $opt_o");
+}
+else{
+ system("$REQLIBS $ugrid $opt_i $opt_o");
+}
+
+1;
+sub lat_lon_depth_2_xyz {
+ my($lat, $lon, $depth) = @_;
+ my($PI, $D2R, $theta, $phi, $r0, $r, $x, $y, $z);
+
+ $R_EARTH_KM = 6371.0;
+ $PI = 3.141592653589793;
+ $D2R = $PI/180.0;
+
+ $theta = ($PI/2.0) - atan(0.99329534*tan($lat*$D2R));
+ $phi = $lon * $D2R;
+ $r0 = 1.0;
+
+ $r = ($R_EARTH_KM - $depth) / $R_EARTH_KM;
+ $x = $r * sin($theta) * cos($phi);
+ $y = $r * sin($theta) * sin($phi);
+ $z = $r * cos($theta);
+ return($x, $y, $z);
+}
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/points2vtu.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/surf2vtu.cxx
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/surf2vtu.cxx (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/surf2vtu.cxx 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,143 @@
+//-----------------------------------------------------------------------------
+// Program: surf2vtu
+// Description: Converts x, y, z, s points to VTK XML Unstructured Grid
+// using definition of cells
+// File: surf2vtu.cxx
+// Author: Nicholas Schwarz, schwarz at evl.uic.edu
+// Electronic Visualization Laboratory
+// University of Illinois at Chicago
+// - wrote ugrid and introduced vtk to Seismo Lab, Caltech
+//
+// Brian Savage savage13 at gps.caltech.edu
+// California Institute of Technology
+// Geologial and Planetary Sciences
+//
+// Qinya Liu, modification from mesh2vtu
+//
+// Input: in binary
+// integer number of points
+// 4 floats (x,y,z,s) point 0
+// ...
+// 4 floats (x,y,z,s) point n-1
+// integer number of quad cells
+// 4 integers (1-4) cell 0
+// ... define a hexahedron of 8 points
+// 4 integers (1-8) cell n-1
+//
+// Date: 4 June 2004 ver 1.0 (was ugrid)
+// - original version, only read in x,y,z,s points
+// 25 June 2004 ver 2.0 (mesh2vtu)
+// - reads in cell definition
+// - input is done in binary
+// 29 Sep 2005 modified to quad2vtu
+// - to deal with quad elements instead of Hexhedron
+//
+//-----------------------------------------------------------------------------
+
+#include <stdio.h>
+#include <sys/types.h>
+#include <sys/stat.h>
+#include <fcntl.h>
+#include <unistd.h>
+
+#include <vtk/vtkFloatArray.h>
+#include <vtk/vtkPoints.h>
+#include <vtk/vtkPointData.h>
+#include <vtk/vtkUnstructuredGrid.h>
+#include <vtk/vtkXMLUnstructuredGridWriter.h>
+#include <vtk/vtkUnstructuredGridToPolyDataFilter.h>
+#include <vtk/vtkXMLPolyDataWriter.h>
+#include <vtk/vtkUnstructuredGridToPolyDataFilter.h>
+#include <vtk/vtkDelaunay3D.h>
+#include <vtk/vtkCellArray.h>
+#include <vtk/vtkPointSet.h>
+#include <vtk/vtkQuad.h>
+
+
+int main(int argc, char** argv) {
+
+ if (argc < 3) {
+ printf("Usage: ugrid input_file output_file\n");
+ return 0;
+ }
+
+ float xyz[3];
+ int cell[8];
+ FILE *file;
+ int i, j;
+ int npts, ncells;
+ int pid[8];
+
+ int fd;
+
+ if((fd = open(argv[1], O_RDONLY)) == -1) {
+ printf("Error opening file: %s.\n", argv[1]);
+ return 0;
+ }
+
+ if(read(fd, &npts, sizeof(int)) != sizeof(int)) {
+ printf("Bad read on file (in points): %s\n", argv[1]);
+ }
+
+ vtkUnstructuredGrid *dataSet = vtkUnstructuredGrid::New();
+ float *xV = new float[npts];
+ float *yV = new float[npts];
+ float *zV = new float[npts];
+ float *sV = new float[npts];
+
+ vtkPoints *newPts = vtkPoints::New();
+ vtkFloatArray *newScalars = vtkFloatArray::New();
+ printf("mesh2vtu: Reading in points: %d\n", npts);
+ for (i = 0 ; i < npts ; i++)
+ {
+ read(fd, &xV[i], sizeof(float));
+ read(fd, &yV[i], sizeof(float));
+ read(fd, &zV[i], sizeof(float));
+ read(fd, &sV[i], sizeof(float));
+ xyz[0] = xV[i];
+ xyz[1] = yV[i];
+ xyz[2] = zV[i];
+ newPts -> InsertPoint(i, xyz);
+ newScalars -> InsertValue(i, sV[i]);
+ }
+
+ vtkCellArray *cells = vtkCellArray::New();
+ if(read(fd, &ncells, sizeof(int)) != sizeof(int)) {
+ printf("Bad read on file (in cells): %s\n", argv[1]);
+ }
+ printf("mesh2vtu: Reading in cells: %d\n", ncells);
+ int *cellTypes = new int[ncells];
+ vtkQuad *quad = vtkQuad::New();
+ quad->GetPointIds()->SetNumberOfIds(4);
+
+ for(i = 0; i < ncells; i++) {
+ for(j = 0; j < 4; j++) {
+ read(fd, &cell[j], sizeof(int));
+ quad->GetPointIds()->SetId(j,cell[j]);
+ }
+ cells->InsertNextCell(quad);
+ cellTypes[i] = quad->GetCellType();
+ }
+
+ close(fd);
+
+ dataSet -> SetPoints(newPts);
+ dataSet -> GetPointData() -> SetScalars(newScalars);
+ dataSet -> SetCells(cellTypes, cells);
+
+ vtkXMLUnstructuredGridWriter* writer = vtkXMLUnstructuredGridWriter::New();
+ writer -> SetInput(dataSet);
+ writer -> SetFileName(argv[2]);
+ writer -> Write();
+
+ writer -> Delete();
+ newPts -> Delete();
+ newScalars -> Delete();
+ dataSet -> Delete();
+ cells -> Delete();
+
+ // printf("Done.\n");
+
+ return 0;
+
+}
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/surf2vtu.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/surf2vtu.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/surf2vtu.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,53 @@
+#!/usr/bin/perl
+
+use Getopt::Std;
+use File::Basename;
+
+$progname = basename($0);
+$surf2vtu = "/opt/seismo-util/source/mesh2vtu/surf2vtu";
+$REQLIBS = "env LD_LIBRARY_PATH=/opt/seismo-util/lib/vtk";
+
+sub Usage {
+ print STDERR <<END;
+Usage: $progname -i input-file -o output-file
+ Takes an input file (binary) with a number of points and a number of cells
+ and transforms them into an unstructured grid file
+
+ -i input-file (Binary file)
+ -o output-file (XML Unstructured Grid File)
+
+ Input Binary files have this structure:
+ number_of_points integer (4 bytes)
+ x_1, y_1, z_1, scalar_1 4 reals (4 bytes each)
+ ...
+ x_n, y_n, z_n, scalar_n 4 reals (4 bytes each)
+ number_of_cells integer (4 bytes)
+ cell_1 (four points) 4 integers (4 bytes each)
+ ...
+ cell_n 4 integers (4 bytes each)
+
+ This is a wrapper around surf2vtu
+
+ Brian Savage 6/26/2004
+ Qinya Liu 9/29/2005 modified to deal with quad elements
+
+END
+ exit(-1);
+}
+
+if(@ARGV == 0) {
+ Usage ();
+}
+
+if(!getopts('i:o:')){die "Check input paramaters \n";}
+
+if(!defined($opt_i)) {
+ die "$progname: Must specify input file -i input-file\n";
+}
+if(!defined($opt_o)) {
+ die "$progname: Must specify output file -o output-file\n";
+}
+#print "$REQLIBS $surf2vtu $opt_i $opt_o\n";
+system("$REQLIBS $surf2vtu $opt_i $opt_o");
+
+1;
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/surf2vtu.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/ugrid.cxx
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/ugrid.cxx (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/ugrid.cxx 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,106 @@
+//-----------------------------------------------------------------------------
+// Program: ugrid
+// Description: Converts x, y, z, s data to VTK XML Unstructured Grid
+// File: ugrid.cxx
+// Author: Nicholas Schwarz, schwarz at evl.uic.edu
+// Electronic Visualization Laboratory
+// University of Illinois at Chicago
+// Date: 4 June 2004
+//-----------------------------------------------------------------------------
+
+#include <stdio.h>
+#include <vtk/vtkHexahedron.h>
+#include <vtk/vtkCellArray.h>
+#include <vtk/vtkFloatArray.h>
+#include <vtk/vtkPoints.h>
+#include <vtk/vtkPointData.h>
+#include <vtk/vtkUnstructuredGrid.h>
+#include <vtk/vtkXMLUnstructuredGridWriter.h>
+
+int main(int argc, char** argv) {
+
+ if (argc < 3) {
+ printf("Usage: ugrid input_file output_file\n");
+ return 0;
+ }
+
+ float xyz[3];
+ FILE *file;
+ int i;
+ int npts, ncells;
+ int pid[8];
+ fprintf(stderr,"Welcome to ugrid\n");
+ if ((file = fopen(argv[1], "r")) == 0)
+ {
+ //cerr << "ERROR: Can't read file: " << filename << "\n";
+ return 0;
+ }
+
+
+ // get points
+
+ fscanf(file, "%d", &npts);
+ fprintf(stderr, "npts: %d\n", npts);
+ vtkUnstructuredGrid *dataSet = vtkUnstructuredGrid::New();
+ float *xV = new float[npts];
+ float *yV = new float[npts];
+ float *zV = new float[npts];
+ float *sV = new float[npts];
+
+ vtkPoints *newPts = vtkPoints::New();
+ vtkFloatArray *newScalars = vtkFloatArray::New();
+
+ for (i = 0 ; i < npts ; i++)
+ {
+ fscanf(file, "%f", &xV[i]);
+ fscanf(file, "%f", &yV[i]);
+ fscanf(file, "%f", &zV[i]);
+ fscanf(file, "%f", &sV[i]);
+ fprintf(stderr, "%f %f %f %f\n", xV[i], yV[i], zV[i], sV[i]);
+ xyz[0] = xV[i];
+ xyz[1] = yV[i];
+ xyz[2] = zV[i];
+ newPts -> InsertPoint(i, xyz);
+ newScalars -> InsertValue(i, sV[i]);
+ }
+
+
+ // get cells
+ fscanf(file, "%d", &ncells);
+
+ vtkHexahedron* ahex;
+
+ for (i = 0 ; i < ncells ; i++)
+ {
+ fscanf(file, "%d %d %d %d %d %d %d %d",
+ &pid[0], &pid[1], &pid[2], &pid[3],
+ &pid[4], &pid[5], &pid[6], &pid[7]);
+ ahex = vtkHexahedron::New();
+ ahex -> GetPointIds() -> InsertNextId(pid[0]);
+ ahex -> GetPointIds() -> InsertNextId(pid[1]);
+ ahex -> GetPointIds() -> InsertNextId(pid[2]);
+ ahex -> GetPointIds() -> InsertNextId(pid[3]);
+ ahex -> GetPointIds() -> InsertNextId(pid[4]);
+ ahex -> GetPointIds() -> InsertNextId(pid[5]);
+ ahex -> GetPointIds() -> InsertNextId(pid[6]);
+ ahex -> GetPointIds() -> InsertNextId(pid[7]);
+ dataSet -> InsertNextCell(ahex -> GetCellType(), ahex -> GetPointIds());
+ }
+
+ dataSet -> SetPoints(newPts);
+ dataSet -> GetPointData() -> SetScalars(newScalars);
+
+
+ vtkXMLUnstructuredGridWriter* writer = vtkXMLUnstructuredGridWriter::New();
+ writer -> SetInput(dataSet);
+ writer -> SetFileName(argv[2]);
+ writer -> Write();
+
+ writer -> Delete();
+ newPts -> Delete();
+ newScalars -> Delete();
+ dataSet -> Delete();
+
+ return 0;
+
+}
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/ugrid_pts.cxx
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/ugrid_pts.cxx (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu/ugrid_pts.cxx 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,75 @@
+//-----------------------------------------------------------------------------
+// Program: ugrid
+// Description: Converts x, y, z, s data to VTK XML Unstructured Grid
+// File: ugrid.cxx
+// Author: Nicholas Schwarz, schwarz at evl.uic.edu
+// Electronic Visualization Laboratory
+// University of Illinois at Chicago
+// Date: 3 June 2004
+//-----------------------------------------------------------------------------
+
+#include <stdio.h>
+#include <vtk/vtkFloatArray.h>
+#include <vtk/vtkPoints.h>
+#include <vtk/vtkPointData.h>
+#include <vtk/vtkUnstructuredGrid.h>
+#include <vtk/vtkXMLUnstructuredGridWriter.h>
+
+int main(int argc, char** argv) {
+
+ if (argc < 3) {
+ printf("Usage: ugrid input_file output_file\n");
+ return 0;
+ }
+
+ float xyz[3];
+ FILE *file;
+ int i;
+ int npts;
+
+ if ((file = fopen(argv[1], "r")) == 0)
+ {
+ //cerr << "ERROR: Can't read file: " << filename << "\n";
+ return 0;
+ }
+
+ fscanf(file, "%d", &npts);
+
+ vtkUnstructuredGrid *dataSet = vtkUnstructuredGrid::New();
+ float *xV = new float[npts];
+ float *yV = new float[npts];
+ float *zV = new float[npts];
+ float *sV = new float[npts];
+
+ vtkPoints *newPts = vtkPoints::New();
+ vtkFloatArray *newScalars = vtkFloatArray::New();
+
+ for(i = 0; i < npts; i++)
+ {
+ fscanf(file, "%f", &xV[i]);
+ fscanf(file, "%f", &yV[i]);
+ fscanf(file, "%f", &zV[i]);
+ fscanf(file, "%f", &sV[i]);
+ xyz[0] = xV[i];
+ xyz[1] = yV[i];
+ xyz[2] = zV[i];
+ newPts -> InsertPoint(i, xyz);
+ newScalars -> InsertValue(i, sV[i]);
+ }
+
+ dataSet -> SetPoints(newPts);
+ dataSet -> GetPointData() -> SetScalars(newScalars);
+
+ vtkXMLUnstructuredGridWriter* writer = vtkXMLUnstructuredGridWriter::New();
+ writer -> SetInput(dataSet);
+ writer -> SetFileName(argv[2]);
+ writer -> Write();
+
+ writer -> Delete();
+ newPts -> Delete();
+ newScalars -> Delete();
+ dataSet -> Delete();
+
+ return 0;
+
+}
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,55 @@
+#!/usr/bin/perl
+
+use Getopt::Std;
+use File::Basename;
+
+$progname = basename($0);
+
+### Please modify the following variables according to your own system setting ###
+$mesh2vtu = "/opt/seismo-util/source/mesh2vtu/mesh2vtu";
+$REQLIBS = "env LD_LIBRARY_PATH=/opt/seismo-util/lib/vtk";
+#################################################################################
+
+sub Usage {
+ print STDERR <<END;
+Usage: $progname -i input-file -o output-file
+ Takes an input file (binary) with a number of points and a number of cells
+ and transforms them into an unstructured grid file
+
+ -i input-file (Binary file)
+ -o output-file (XML Unstructured Grid File)
+
+ Input Binary files have this structure:
+ number_of_points integer (4 bytes)
+ x_1, y_1, z_1, scalar_1 4 reals (4 bytes each)
+ ...
+ x_n, y_n, z_n, scalar_n 4 reals (4 bytes each)
+ number_of_cells integer (4 bytes)
+ cell_1 (eight points) 8 integers (4 bytes each)
+ ...
+ cell_n 8 integers (4 bytes each)
+
+ This is a wrapper around mesh2vtu
+
+ Brian Savage 6/26/2004
+
+END
+ exit(-1);
+}
+
+if(@ARGV == 0) {
+ Usage ();
+}
+
+if(!getopts('i:o:')){die "Check input paramaters \n";}
+
+if(!defined($opt_i)) {
+ die "$progname: Must specify input file -i input-file\n";
+}
+if(!defined($opt_o)) {
+ die "$progname: Must specify output file -o output-file\n";
+}
+#print "$REQLIBS $mesh2vtu $opt_i $opt_o\n";
+system("$REQLIBS $mesh2vtu $opt_i $opt_o");
+
+1;
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/mesh2vtu.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraview-run.py
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraview-run.py (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraview-run.py 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,33 @@
+#! /usr/bin/env pvpython
+
+import os
+import sys
+import fileinput
+import string
+from paraview import servermanager
+
+
+# loop
+# be sure to have called :
+# > ls -1 AVS_movie_0*.inp | gawk '{print "sed -e \"s/AVS_movie_0001000.inp/"$1"/g\"< paraview_movie.pvsm > "$1".pvsm"}' | sh
+# > ls -1 AVS_movie_0*.inp.pvsm > tmp.in
+
+f = open("tmp.in", "r")
+
+receiverInput = open("tmp.in","r")
+line = receiverInput.readline()
+icounter = 0
+
+while line :
+ length= len(line)
+ filename = line[0:length-1]
+ print filename
+ icounter = icounter + 1
+ str_i = "%6.6d " % ( icounter )
+
+ os.system("./paraviewpython-example.py "+filename+" "+str_i)
+
+ #raw_input("Enter to continue")
+
+ line = receiverInput.readline()
+receiverInput.close()
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraview-run.py
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraview_movie.000050.jpg
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraview_movie.000050.jpg
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraviewpython-example.py
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraviewpython-example.py (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraviewpython-example.py 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,29 @@
+#! /usr/bin/env pvpython
+
+import os
+import sys
+import fileinput
+import string
+from paraview import servermanager
+
+## input:
+if len(sys.argv) == 3:
+ filename = str(sys.argv[1])
+ icounter = str(sys.argv[2])
+
+outfile = "paraview_movie."
+print "file root: ",outfile
+
+## paraview
+servermanager.Connect()
+view = servermanager.CreateRenderView()
+servermanager.LoadState(filename)
+view = servermanager.GetRenderView()
+view.UseOffscreenRenderingForScreenshots = 1
+
+## save as jpeg
+jpegfilename = outfile+str(icounter)+".jpg"
+print "plot to: " + jpegfilename
+view.WriteImage(jpegfilename, "vtkJPEGWriter", 1)
+print
+
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/paraviewpython-example.py
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/readme.txt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/readme.txt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/Paraview/readme.txt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,88 @@
+--------------------------------
+readme
+--------------------------------
+
+ParaView, ParaView is an open-source, multi-platform application designed to visualize data sets
+http://www.paraview.org/
+
+
+
+- contains mesh2vtu/:
+
+ mesh2vtu/ -- it requires the installation of vtk package.
+ once vtk is installed, you can set the vars
+ in the Makefile and compile all the programs
+
+ How to collect and visualize 3D/2D data generated by the parallel simulation?
+
+ 0. run global_slice_number(2).pl to figure out the slices you need to collect
+
+ 1. copy database using the corresponding scripts in collect_database/
+
+ 2. combine all the databases using the program combine_vol_data.f90 or combine_surf_data.f90
+
+ 3. convert the mesh file to vtu file using mesh2vtu/
+
+ 4. visualizing in Paraview. After loading in the .vtu file, you can generate the source-
+ receiver cross-section using the normals given by global_slice_number.pl
+
+ Yes, it is a pretty painful process. You can certainly streamline them using a master bash
+ script. To make life easier, you can use VTK scripts instead of Paraview in step 4.
+
+ Good luck!
+
+ Qinya, May 2007, Caltech
+
+
+
+- example procedure to make a movie plot:
+
+ 1. run specfem with the movie options (see Par_file):
+
+ MOVIE_SURFACE = .true.
+ MOVIE_COARSE = .false.
+
+ and adjust the time steps NSTEP_BETWEEN_FRAMES
+
+ this creates binary files in directory OUTPUT_FILES/ like: moviedata000100,...
+
+
+ 2. convert binary files to AVS-files (readable by Paraview):
+
+ in SPECFEM3D_GLOBE: > make xcreate_movie_AVS_DX
+
+ choose option 2 for individual files
+
+ outputs files like: OUTPUT_FILES/AVS_movie_000100.inp, ...
+
+
+ 3. make a default state-file with paraview:
+
+ run > paraview &
+
+ load files: under -> File / Open... select e.g. AVS_movie_009000.inp & AVS_continent_boundary.inp
+ align and orient image, save state file under -> File / Save State as...
+
+ save under: paraview_movie.pvsm
+
+
+ 4. create for each AVS-inp file a corresponding state-file:
+
+ > ls -1 AVS_movie_0*.inp | gawk '{print "sed -e \"s/AVS_movie_009000.inp/"$1"/g\"< paraview_movie.pvsm > "$1".pvsm"}' | sh
+
+ and create a new file tmp.in:
+
+ > ls -1 AVS_movie_0*.inp.pvsm > tmp.in
+
+
+ 5. run the script:
+
+ > ./paraview-run.py
+
+ which renders jpeg files: paraview_movie.000001.jpg,...
+
+
+ 6. make mpeg-movie (and resize images) using command from ImageMagick (http://www.imagemagick.org)
+
+ > convert -delay 8 -resize 400x320 paraview_movie.*.jpg movie.mpg
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/bin_image.png
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/bin_image.png
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/blue_white_red.cpt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/blue_white_red.cpt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/blue_white_red.cpt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,261 @@
+# cpt file created by: makecpt -V -Cpolar -T0/255/1 -Z
+#COLOR_MODEL = RGB
+#
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/convert_cpt_lookuptable_python.bash
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/convert_cpt_lookuptable_python.bash (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/convert_cpt_lookuptable_python.bash 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,15 @@
+#!/bin/bash
+#
+# based on GMT makecpt
+#
+if [ $# -eq 0 ]; then
+ echo "convert_cpt_lookuptable.bash cpt_name_from_gmt (no_green,seis,etc)"
+ exit
+fi
+
+cpt=$1
+ncolors=25
+echo "colortable.SetNumberOfTableValues($ncolors)"
+makecpt -C$cpt -I -T0/$ncolors/1 > temp.cpt
+nline=`wc temp.cpt | awk '{print $1}'`
+awk 'NR > 3 && NR < '$nline'-2 {print "colortable.SetTableValue( ",NR-4,",",$2/255,",",$3/255,",",$4/255,",",1.0,")"}' temp.cpt
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/convert_cpt_lookuptable_python.bash
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/gray_pyramid_inv.cpt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/gray_pyramid_inv.cpt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/gray_pyramid_inv.cpt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,261 @@
+# cpt file created by: makecpt -V -I -Cgray -T0/128/1 -Z
+#COLOR_MODEL = RGB
+#
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+242 229 229 229 243 231 231 231
+243 231 231 231 244 233 233 233
+244 233 233 233 245 235 235 235
+245 235 235 235 246 237 237 237
+246 237 237 237 247 239 239 239
+247 239 239 239 248 241 241 241
+248 241 241 241 249 243 243 243
+249 243 243 243 250 245 245 245
+250 245 245 245 251 247 247 247
+251 247 247 247 252 249 249 249
+252 249 249 249 253 251 251 251
+253 251 251 251 254 253 253 253
+254 253 253 253 255 255 255 255
+B 0 0 0
+F 0 0 0
+N 0 0 0
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_VTK.py
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_VTK.py (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_VTK.py 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,116 @@
+#!/usr/bin/env python
+#
+# creates a PNG file from a polygon data file *.vtk
+#
+from vtk import *
+import sys
+
+# input:
+if len(sys.argv) == 2:
+ modelfile = str(sys.argv[1])
+else :
+ print "Usage: python plot_VTK.py OUTPUT_FILES/bin_movie_009000.d.vtk"
+ sys.exit(1)
+
+print "modelfile: ",modelfile
+
+
+# creates 2D projection view
+# graticule
+latLevel = 3
+lngLevel = 3
+pname = "eqc" # equidistant cylindrical (plate caree)
+pcs = vtkGeoProjection()
+pcs.SetName( pname )
+pcs.SetCentralMeridian( 0. )
+gcs = vtkGeoProjection()
+xfm = vtkGeoTransform()
+xfm.SetSourceProjection( gcs )
+xfm.SetDestinationProjection( pcs )
+
+# reads in polygon data
+model = vtkPolyDataReader()
+model.SetFileName(modelfile)
+model.Update()
+
+# Delaunay triangulation on data
+delaunay2D = vtkDelaunay2D()
+delaunay2D.SetInput( model.GetOutput() )
+delaunay2D.Update()
+print "delaunay : "
+print " points: ",delaunay2D.GetOutput().GetNumberOfPoints()
+print " polygons: ",delaunay2D.GetOutput().GetNumberOfPolys()
+
+xf3 = vtkTransformFilter()
+xf3.SetTransform( xfm )
+xf3.SetInputConnection( delaunay2D.GetOutputPort() )
+
+
+# coloring
+#output from: ./convert_cpt_lookuptable_python.bash blue_white_red.cpt
+colortable = vtkLookupTable()
+colortable.SetNumberOfTableValues(25)
+colortable.SetTableValue( 0 , 1 , 0.0392157 , 0.0392157 , 1.0 )
+colortable.SetTableValue( 1 , 1 , 0.121569 , 0.121569 , 0.878431 )
+colortable.SetTableValue( 2 , 1 , 0.2 , 0.2 , 0.8 )
+colortable.SetTableValue( 3 , 1 , 0.278431 , 0.278431 , 0.721569 )
+colortable.SetTableValue( 4 , 1 , 0.360784 , 0.360784 , 0.639216 )
+colortable.SetTableValue( 5 , 1 , 0.439216 , 0.439216 , 0.560784 )
+colortable.SetTableValue( 6 , 1 , 0.521569 , 0.521569 , 0.47451 )
+colortable.SetTableValue( 7 , 1 , 0.6 , 0.6 , 0.396078 )
+colortable.SetTableValue( 8 , 1 , 0.678431 , 0.678431 , 0.317647 )
+colortable.SetTableValue( 9 , 1 , 0.760784 , 0.760784 , 0.235294 )
+colortable.SetTableValue( 10 , 1 , 0.839216 , 0.839216 , 0.156863 )
+colortable.SetTableValue( 11 , 1 , 0.921569 , 0.921569 , 0.0745098 )
+colortable.SetTableValue( 12 , 0.996078 , 0.996078 , 0.996078 , 0.0 )
+colortable.SetTableValue( 13 , 0.921569 , 0.921569 , 1 , 0.0823529 )
+colortable.SetTableValue( 14 , 0.839216 , 0.839216 , 1 , 0.164706 )
+colortable.SetTableValue( 15 , 0.760784 , 0.760784 , 1 , 0.243137 )
+colortable.SetTableValue( 16 , 0.678431 , 0.678431 , 1 , 0.32549 )
+colortable.SetTableValue( 17 , 0.6 , 0.6 , 1 , 0.403922 )
+colortable.SetTableValue( 18 , 0.521569 , 0.521569 , 1 , 0.482353 )
+colortable.SetTableValue( 19 , 0.439216 , 0.439216 , 1 , 0.560784 )
+colortable.SetTableValue( 20 , 0.360784 , 0.360784 , 1 , 0.639216 )
+colortable.SetTableValue( 21 , 0.278431 , 0.278431 , 1 , 0.721569 )
+colortable.SetTableValue( 22 , 0.2 , 0.2 , 1 , 0.8 )
+colortable.SetTableValue( 23 , 0.121569 , 0.121569 , 1 , 0.878431 )
+colortable.SetTableValue( 24 , 0.0392157 , 0.0392157 , 1 , 1.0 )
+colortable.SetTableRange(0.0,255.0)
+
+# creates new actor based on PolyData mapper
+mapper3 = vtkPolyDataMapper()
+mapper3.SetInputConnection( xf3.GetOutputPort() )
+mapper3.SetScalarRange(0.0,255.0)
+mapper3.ColorArrayName= "displacement"
+mapper3.ColorAttributeType= 0
+mapper3.SetLookupTable( colortable )
+
+actor3 = vtkActor()
+actor3.SetMapper( mapper3 )
+
+
+# view rendering
+ren = vtkRenderer()
+ren.AddActor( actor3 )
+ren.SetBackground(0,0,0) # black
+
+window = vtkRenderWindow()
+window.SetMultiSamples(0)
+window.AddRenderer( ren )
+window.SetSize(1000, 500)
+window.OffScreenRenderingOn()
+
+ren.ResetCamera()
+ren.GetActiveCamera().Zoom(2.2)
+window.Render()
+
+# writes png images
+windowToImage = vtkWindowToImageFilter()
+windowToImage.SetInput(window)
+PNGWriter = vtkPNGWriter()
+PNGWriter.SetInputConnection( windowToImage.GetOutputPort() )
+PNGWriter.SetFileName("bin_color.png")
+PNGWriter.Write()
+
+#window.GetInteractor().Initialize()
+#window.GetInteractor().Start()
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_VTK.py
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_VTK_gray.py
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_VTK_gray.py (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_VTK_gray.py 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,117 @@
+#!/usr/bin/env python
+#
+# creates a (gray-scale) PNG file from a polygon data file *.vtk
+#
+from vtk import *
+import sys
+
+# input:
+if len(sys.argv) == 2:
+ modelfile = str(sys.argv[1])
+else :
+ print "Usage: python plot_VTK_gray.py OUTPUT_FILES/bin_movie_009000.d.vtk"
+ sys.exit(1)
+
+print "modelfile: ",modelfile
+
+
+# creates 2D projection view
+# graticule
+latLevel = 3
+lngLevel = 3
+pname = "eqc" # equidistant cylindrical (plate caree)
+pcs = vtkGeoProjection()
+pcs.SetName( pname )
+pcs.SetCentralMeridian( 0. )
+gcs = vtkGeoProjection()
+xfm = vtkGeoTransform()
+xfm.SetSourceProjection( gcs )
+xfm.SetDestinationProjection( pcs )
+
+# reads in polygon data
+model = vtkPolyDataReader()
+model.SetFileName(modelfile)
+model.Update()
+
+# Delaunay triangulation on data
+delaunay2D = vtkDelaunay2D()
+delaunay2D.SetInput( model.GetOutput() )
+delaunay2D.Update()
+print "delaunay : "
+print " points: ",delaunay2D.GetOutput().GetNumberOfPoints()
+print " polygons: ",delaunay2D.GetOutput().GetNumberOfPolys()
+
+xf3 = vtkTransformFilter()
+xf3.SetTransform( xfm )
+xf3.SetInputConnection( delaunay2D.GetOutputPort() )
+
+
+# coloring
+#output from: ./convert_cpt_lookuptable_python.bash gray_pyramid_inv.cpt
+colortable = vtkLookupTable()
+colortable.SetNumberOfTableValues(25)
+colortable.SetTableValue( 0 , 1.0 , 1.0 , 1.0 , 1 )
+colortable.SetTableValue( 1 , 0.878431 , 0.878431 , 0.878431 , 1 )
+colortable.SetTableValue( 2 , 0.8 , 0.8 , 0.8 , 1 )
+colortable.SetTableValue( 3 , 0.721569 , 0.721569 , 0.721569 , 1 )
+colortable.SetTableValue( 4 , 0.639216 , 0.639216 , 0.639216 , 1 )
+colortable.SetTableValue( 5 , 0.560784 , 0.560784 , 0.560784 , 1 )
+colortable.SetTableValue( 6 , 0.47451 , 0.47451 , 0.47451 , 1 )
+colortable.SetTableValue( 7 , 0.396078 , 0.396078 , 0.396078 , 1 )
+colortable.SetTableValue( 8 , 0.317647 , 0.317647 , 0.317647 , 1 )
+colortable.SetTableValue( 9 , 0.235294 , 0.235294 , 0.235294 , 1 )
+colortable.SetTableValue( 10 , 0.156863 , 0.156863 , 0.156863 , 1 )
+colortable.SetTableValue( 11 , 0.0745098 , 0.0745098 , 0.0745098 , 1 )
+colortable.SetTableValue( 12 , 0.00392157 , 0.00392157 , 0.00392157 , 1 )
+colortable.SetTableValue( 13 , 0.0823529 , 0.0823529 , 0.0823529 , 1 )
+colortable.SetTableValue( 14 , 0.164706 , 0.164706 , 0.164706 , 1 )
+colortable.SetTableValue( 15 , 0.243137 , 0.243137 , 0.243137 , 1 )
+colortable.SetTableValue( 16 , 0.32549 , 0.32549 , 0.32549 , 1 )
+colortable.SetTableValue( 17 , 0.403922 , 0.403922 , 0.403922 , 1 )
+colortable.SetTableValue( 18 , 0.482353 , 0.482353 , 0.482353 , 1 )
+colortable.SetTableValue( 19 , 0.560784 , 0.560784 , 0.560784 , 1 )
+colortable.SetTableValue( 20 , 0.639216 , 0.639216 , 0.639216 , 1 )
+colortable.SetTableValue( 21 , 0.721569 , 0.721569 , 0.721569 , 1 )
+colortable.SetTableValue( 22 , 0.8 , 0.8 , 0.8 , 1 )
+colortable.SetTableValue( 23 , 0.878431 , 0.878431 , 0.878431 , 1 )
+colortable.SetTableValue( 24 , 1.0 , 1.0 , 1.0 , 1 )
+colortable.SetTableRange(0.0,255.0)
+
+
+# creates new actor based on PolyData mapper
+mapper3 = vtkPolyDataMapper()
+mapper3.SetInputConnection( xf3.GetOutputPort() )
+mapper3.SetScalarRange(0.0,255.0)
+mapper3.ColorArrayName= "displacement"
+mapper3.ColorAttributeType= 0
+mapper3.SetLookupTable( colortable )
+
+actor3 = vtkActor()
+actor3.SetMapper( mapper3 )
+
+
+# view rendering
+ren = vtkRenderer()
+ren.AddActor( actor3 )
+ren.SetBackground(0,0,0) # black
+
+window = vtkRenderWindow()
+window.SetMultiSamples(0)
+window.AddRenderer( ren )
+window.SetSize(1000, 500)
+window.OffScreenRenderingOn()
+
+ren.ResetCamera()
+ren.GetActiveCamera().Zoom(2.2)
+window.Render()
+
+# writes png images
+windowToImage = vtkWindowToImageFilter()
+windowToImage.SetInput(window)
+PNGWriter = vtkPNGWriter()
+PNGWriter.SetInputConnection( windowToImage.GetOutputPort() )
+PNGWriter.SetFileName("bin_mask.png")
+PNGWriter.Write()
+
+#window.GetInteractor().Initialize()
+#window.GetInteractor().Start()
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_VTK_gray.py
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_movie_GMT_binary_VTK.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_movie_GMT_binary_VTK.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_movie_GMT_binary_VTK.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,281 @@
+#!/usr/bin/perl -W
+#
+# reads in binary files produced from xcreate_movie_GMT_global
+# and creates png files with transparency
+#
+# uses segmented M-file to plot with psxy
+#
+
+use Getopt::Std;
+use POSIX;
+
+sub Usage {
+ print STDERR <<EOF;
+
+Usage: plot_movie_GMT_binary_VTK.pl file_name
+
+ ex. ./plot_movie_GMT_binary_VTK.pl OUTPUT_FILES/bin_movie_00***.d
+
+EOF
+exit(1)
+}
+
+if (!getopts('l:L:cdts')) {die('Check input arguments\n');}
+ at ARGV > 0 or Usage();
+
+
+#######################################################
+## PARAMETERS
+
+# specfem3D Par_file settings
+$nex = 160;
+$nproc = 5;
+$nchunks = 6;
+
+# gunzipped files (ending .gz)
+$gzipped = 0;
+
+# point locations
+$xy_file = "OUTPUT_FILES/bin_movie.xy";
+
+# non-linear scaling
+$power_scaling = 0.5;
+
+
+#######################################################
+
+
+# gunzips location file
+if( $gzipped == 1 ){
+ system("cp -v $xy_file.gz $xy_file.gz.org");
+ system("gunzip -f $xy_file.gz");
+}
+
+print "Processing locations: $xy_file\n";
+
+(@lines) = read_binary_file_locations($xy_file);
+$nlines = @lines;
+print " number of lines: $nlines\n\n";
+
+# restore gzipped file
+if( $gzipped == 1 ) {system("mv $xy_file.gz.org $xy_file.gz");}
+
+open(CSH,">plot_movie.csh");
+
+
+foreach $file (@ARGV) {
+
+ if (not -f $file) {die("No $file\n");}
+
+ print "Processing frame $file...\n";
+
+ # gunzips data file
+ if( $gzipped == 1 ){
+ $filegz = $file;
+ $file = substr($file,0,length($filegz)-3);
+ system("cp $filegz $filegz.org");
+ system("gunzip -f $filegz");
+ }
+ print " $file\n";
+
+ # reads displacement file (binary data)
+ (@lines_f) = read_binary_file_data($file);
+ $nlines_f = @lines_f;
+
+ # restore gzipped file
+ if( $gzipped == 1 ) {system("mv $filegz.org $filegz");}
+
+ if ($nlines_f != $nlines) {die("number of lines differ\n");}
+
+
+ # non-linear scaling of displacement data and min/max
+ $min = 1.e30;
+ $max = -1.e30;
+ for($i=0;$i<$nlines;$i++){
+ # scale between 0,1
+ $val = $lines_f[$i];
+ if( $power_scaling > 0 ) {
+ if( $val > 0 ){
+ $val = $val**$power_scaling;
+ }else{
+ $val = - abs($val)**$power_scaling;
+ }
+ }
+ # determines min/max of displacements
+ if( $val < $min) {$min = $val;}
+ if( $val > $max) {$max = $val;}
+ $lines_f[$i] = $val;
+ }
+ if( abs($min) > abs($max) ){$max = abs($min);}
+
+ # writes out segment file
+ open VTKFILE, ">$file.vtk" or die $!;
+ print VTKFILE "# vtk DataFile Version 3.1\n";
+ print VTKFILE "specfem3D_data\n";
+ print VTKFILE "ASCII\n";
+ print VTKFILE "DATASET POLYDATA\n";
+ print VTKFILE "POINTS $nlines float\n";
+
+ @elem_val = ();
+ for($i=0;$i<$nlines;$i++){
+ # scale between 0,1
+ $val = ($lines_f[$i] + $max)/(2.0*$max);
+ # scale between 0, 255
+ $val = $val * 255.0;
+
+ # prints value together with coordinates
+ $coord = $lines[$i];
+ chomp($coord);
+
+ # adds point: uses lon, lat and 0 (flat earth file)
+ print VTKFILE "$coord 0.0 \n";
+
+ # stores values in arrays
+ push(@elem_val, $val );
+ }
+ print VTKFILE "\n";
+
+
+ # specfem3D output for MOVIE_COARSE
+ $nex_per_proc = $nex / $nproc ;
+ $total = $nproc * $nex_per_proc * $nproc * $nex_per_proc * $nchunks;
+ if( $total != $nlines ){ die("error nex/proc $nlines $total");}
+
+ $npoly = $nproc * $nproc* $nchunks * ($nex_per_proc-1) * ($nex_per_proc-1);
+ print VTKFILE "POLYGONS $npoly ",$npoly*5," \n";
+ $count = 0;
+ for($n=0;$n<$nproc*$nproc*$nchunks;$n++){
+ for($m=0;$m<$nex_per_proc-1;$m++){
+ for ($k=0;$k<$nex_per_proc-1;$k++){
+ # global array index
+ $i = $k + $m*$nex_per_proc + $n*$nex_per_proc*$nex_per_proc;
+
+ # adds element
+ print VTKFILE "4 ",$i," ",$i+1," ",$i+$nex_per_proc+1," ",$i+$nex_per_proc," \n";
+ $count++;
+ }
+ }
+ }
+ print VTKFILE "\n";
+
+ print "count: $count \n";
+
+ print VTKFILE "POINT_DATA $nlines \n";
+ print VTKFILE "SCALARS displacement float\n";
+ print VTKFILE "LOOKUP_TABLE default\n";
+ for($i=0;$i<$nlines;$i++){
+ $val = $elem_val[$i];
+ print VTKFILE "$val \n";
+ }
+ print VTKFILE "\n";
+ close(VTKFILE);
+
+ # creates png files
+ #print CSH "python plot_VTKdisp.py $file.vtk \n";
+ #print CSH "python plot_VTKdisp_gray.py $file.vtk \n";
+ #print CSH "mv bin_disp.png $file.disp.png \n";
+ #print CSH "mv bin_mask.png $file.mask.png \n";
+
+ # creates file with transparency (opacity)
+ #print CSH "composite -compose CopyOpacity $file.mask.png $file.disp.png $file.png\n";
+
+ print CSH "echo \n";
+ print CSH "echo 'plotted: $file.png' \n";
+ print CSH "echo \n";
+
+}
+close(CSH);
+
+print "\nplotting... \n\n";
+
+system("csh -f plot_movie.csh");
+
+system("rm -f plot_movie.csh");
+
+#-------------------------------------------------------------
+
+sub read_binary_file_locations{
+
+ my($xy_file) = @_;
+ my(@return_lines);
+ my(@lines,$line,$is_ok,$junk,$n1,$n2,$data1,$data2);
+
+ # reads in locations (binary data)
+ open FILE, "$xy_file" or die $!;
+ binmode FILE;
+
+ @lines= () ;
+ $line="";
+ $is_ok = 1;
+ while ( $is_ok != 0) {
+ read FILE, $junk, 4;
+
+ $n1 = read FILE, $data1, 4;
+ if( $n1 != 0 ){
+ ($lon) = unpack( "f",$data1);
+ }
+ $n2 = read FILE, $data2, 4;
+ if( $n2 != 0 ){
+ ($lat) = unpack( "f",$data2);
+ }
+ read FILE, $junk, 4;
+
+ #print "$n1 $n2 bytes read: lon=$lon \t \t lat=$lat\n";
+
+ if( $n1 != 0 && $n2 != 0 ){
+ $line = "$lon $lat \n";
+ push(@lines, $line);
+ $is_ok = 1;
+ }
+ else{ $is_ok = 0;}
+
+ }
+ close(FILE);
+
+ @return_lines = @lines;
+ return @return_lines;
+
+}
+
+
+#-------------------------------------------------------------
+
+sub read_binary_file_data{
+
+ my($file) = @_;
+ my(@return_lines_f);
+ my(@lines_f,$is_ok,$junk,$n1,$data1);
+
+ open FILE, "$file" or die $!;
+ binmode FILE;
+
+ @lines_f = () ;
+ $line = "";
+ $is_ok = 1;
+ while ( $is_ok != 0) {
+ read FILE, $junk, 4;
+
+ $n1 = read FILE, $data1, 4;
+ if( $n1 != 0 ){
+ ($val) = unpack( "f",$data1);
+ }
+
+ read FILE, $junk, 4;
+
+ #print "$n1 bytes read: value=$val \n";
+
+ if( $n1 != 0 ){
+ $line = "$val \n";
+ push(@lines_f, $line);
+ $is_ok = 1;
+ }
+ else{ $is_ok = 0;}
+ }
+ close(FILE);
+
+ @return_lines_f = @lines_f;
+ return @return_lines_f;
+
+}
+
+#-------------------------------------------------------------
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/plot_movie_GMT_binary_VTK.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/readme.txt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/readme.txt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/VTK/readme.txt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,115 @@
+--------------------------------
+readme
+--------------------------------
+
+VTK, The Visualization Toolkit
+http://www.vtk.org/
+
+
+
+- procedure to make a PNG image (flat earth):
+
+------------------
+NOTE: this requires VTK to be installed and compiled with python wrappers
+ see small howto note below.
+------------------
+
+
+1. run specfem with the movie options (see Par_file):
+
+ MOVIE_SURFACE = .true.
+ MOVIE_COARSE = .false.
+
+ and adjust the time steps NSTEP_BETWEEN_FRAMES
+
+ this creates binary files in directory OUTPUT_FILES/ like: moviedata000100,...
+
+
+2. convert binary files to GMT-files:
+
+ in SPECFEM3D_GLOBE: > make xcreate_movie_GMT_global
+
+ run it > ./xcreate_movie_GMT_global
+
+ choose option for binary (T)
+ to create individual files
+
+
+3. create VTK files:
+
+ > ./plot_movie_GMT_binary_VTK.pl OUTPUT_FILES/bin_movie_00***.d
+
+
+4. render VTK files to create a PNG image:
+
+ for each single file:
+
+ > python plot_VTK.py OUTPUT_FILES/bin_movie_009000.d.vtk
+
+ this creates a single PNG image 'bin_color.png'
+
+
+optional, to add transparency:
+
+ a) create a color image:
+
+ > python plot_VTK.py OUTPUT_FILES/bin_movie_009000.d.vtk
+
+ and a gray-scale image:
+
+ > python plot_VTK_gray.py OUTPUT_FILES/bin_movie_009000.d.vtk
+
+
+ b) use the gray-scale image as alpha channel in the new file to
+ create a file with transparency (opacity):
+
+ > composite -compose CopyOpacity bin_mask.png bin_color.png bin_image.png
+
+ this requires software installed from ImageMagick
+ ( http://www.imagemagick.org/ )
+
+
+
+------------------
+VTK installation - python wrapper:
+------------------
+
+ download sources from:
+ http://www.vtk.org/VTK/resources/software.html
+
+ install with python wrappers and Geovis for example in /opt/vtk-5.4.2:
+ > cd /opt/vtk-5.4.2
+ > tar -xvf vtk-5.4.2.tar
+ > cd VTK
+ > ccmake .
+
+ turn on options: BUILD_SHARED_LIBS ON
+ CMAKE_INSTALL_PREFIX /opt/vtk-5.4.2
+ VTK_USE_GEOVIS ON
+ VTK_WRAP_PYTHON ON
+ > make
+ > make install
+
+ export your python path specifics for example in ~/.bashrc:
+
+ # vtk python
+ export PYTHONPATH=$PYTHONPATH:/opt/vtk-5.4.2/VTK/bin
+ export PYTHONPATH=$PYTHONPATH:/opt/vtk-5.4.2/VTK/Wrapping/Python/
+ export PATH=$PATH:/opt/vtk-5.4.2/VTK/bin
+ export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/vtk-5.4.2/VTK/lib/
+
+ check if properly installed:
+ > cd ~/SPECFEM3D_GLOBE/UTILS/VTK
+ > python
+
+ >>> from vtk import *
+ >>> gs = vtkGeoProjection()
+
+ if any of this fails, check your path default settings:
+
+ >>> import sys
+ >>> sys.path
+
+ and fix the paths in your ~/.bashrc
+
+
\ No newline at end of file
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/DX_continent_boundaries.dx
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/DX_continent_boundaries.dx (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/DX_continent_boundaries.dx 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,15330 @@
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+attribute "dep" string "positions"
+object "irregular connections irregular positions" class field
+component "positions" value 1
+component "connections" value 2
+component "data" value 3
+end
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_cropped.dat
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_cropped.dat (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_cropped.dat 2010-02-20 19:58:48 UTC (rev 16284)
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_opaque.cm
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_opaque.cm (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_opaque.cm 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,122 @@
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_transparent.cm
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_transparent.cm (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/GMT_globe_palette_transparent.cm 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,124 @@
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/add_logo_to_images.csh
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/add_logo_to_images.csh (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/add_logo_to_images.csh 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,16 @@
+#!/bin/csh
+
+# add logo banner to all images before creating a movie
+
+foreach file ($*)
+
+echo adding logo to image $file...
+
+set file1 = `basename $file 0.tiff`
+
+set file2 = `echo $file1 | sed 's/^imagemovie0//'`
+
+montage -tile 1x2 -frame 0 -geometry +0+0 -depth 8 -strip $file ../banner_logos.tiff ../sequence_finale/te{$file2}.tif
+
+end
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/assemble_final_MPEG_movie.csh
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/assemble_final_MPEG_movie.csh (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/assemble_final_MPEG_movie.csh 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,6 @@
+#!/bin/csh
+
+# assemble the different MPEG files to create the final MPEG movie
+
+mpgjoin title_01.mpeg movie_opaque_europe.mpeg title_02.mpeg movie_transparent_europe.mpeg title_03.mpeg movie_opaque_pacific.mpeg title_02.mpeg movie_transparent_pacific.mpeg -o movie_SPECFEM3D_CINES_05nov2008.mpeg
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/constants_topo.h
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/constants_topo.h (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/constants_topo.h 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,515 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 1
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! August 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+! constants.h. Generated from constants.h.in by configure.
+
+!
+!--- user can modify parameters below
+!
+
+! exaggeration factor to display topography in OpenDX
+ double precision, parameter :: EXAGGERATION_FACTOR_TOPO = 22.d0 ! 35.d0
+
+! this for non blocking assembly
+ logical, parameter :: USE_NONBLOCKING_COMMS = .true.
+ integer, parameter :: ELEMENTS_NONBLOCKING_CM_IC = 1500
+ integer, parameter :: ELEMENTS_NONBLOCKING_OC = 3000
+
+ logical, parameter :: DEBUG_NONBLOCKING_COMMS = .false.
+ logical, parameter :: DEBUG_USING_OPENDX = .false.
+
+!! DK DK temporary patch for the large Gordon Bell runs: set RECEIVERS_CAN_BE_BURIED
+!! DK DK to false in all cases etc
+ logical, parameter :: PATCH_FOR_GORDON_BELL = .true.
+
+! save partial seismograms every 10,000 time steps or not
+ logical, parameter :: SAVE_PARTIAL_SEISMOGRAMS = .false.
+
+! (much) faster detection of receivers at high resolution: use grid points only
+ logical, parameter :: FASTER_RECEIVERS_POINTS_ONLY = .true.
+
+! suppress calculation and storage of seismograms if needed
+ logical, parameter :: COMPUTE_STORE_SEISMOGRAMS = .true.
+
+!! DK DK for Gordon Bell
+! integer, parameter :: SEA99_VS_DIM1 = 100, SEA99_VS_DIM2 = 100, SEA99_VS_DIM3 = 100
+ integer, parameter :: SEA99_VS_DIM1 = 1, SEA99_VS_DIM2 = 1, SEA99_VS_DIM3 = 1
+
+!! DK DK for Gordon Bell
+! integer, parameter :: AMM_V_DIM1 = 14, AMM_V_DIM2 = 34, AMM_V_DIM3 = 37, AMM_V_DIM4 = 73
+! use 6 for first index to avoid a warning when compiling
+ integer, parameter :: AMM_V_DIM1 = 6, AMM_V_DIM2 = 1, AMM_V_DIM3 = 1, AMM_V_DIM4 = 1
+
+!
+! solver in single or double precision depending on the machine (4 or 8 bytes)
+!
+! ALSO CHANGE FILE precision.h ACCORDINGLY
+!
+ integer, parameter :: SIZE_REAL = 4, SIZE_DOUBLE = 8
+
+! usually the size of integer and logical variables is the same as regular single-precision real variable
+ integer, parameter :: SIZE_INTEGER = SIZE_REAL
+ integer, parameter :: SIZE_LOGICAL = SIZE_REAL
+
+! set to SIZE_REAL to run in single precision
+! set to SIZE_DOUBLE to run in double precision (increases memory size by 2)
+ integer, parameter :: CUSTOM_REAL = SIZE_REAL
+
+! input, output and main MPI I/O files
+ integer, parameter :: ISTANDARD_OUTPUT = 6
+ integer, parameter :: IIN = 40,IOUT = 41,IOUT_SAC = 903
+! local file unit for output of buffers
+ integer, parameter :: IOUT_BUFFERS = 35
+! uncomment this to write messages to a text file
+ integer, parameter :: IMAIN = 42
+! uncomment this to write messages to the screen (slows down the code)
+! integer, parameter :: IMAIN = ISTANDARD_OUTPUT
+
+! number of values read in Par_file that we need to broadcast
+ integer, parameter :: NVALUES_bcast_integer = 41
+ integer, parameter :: NVALUES_bcast_double_precision = 30
+ integer, parameter :: NVALUES_bcast_logical = 33
+
+! R_EARTH is the radius of the bottom of the oceans (radius of Earth in m)
+ double precision, parameter :: R_EARTH = 6371000.d0
+! uncomment line below for PREM with oceans
+! double precision, parameter :: R_EARTH = 6368000.d0
+
+! average density in the full Earth to normalize equation
+ double precision, parameter :: RHOAV = 5514.3d0
+
+! for topography/bathymetry model
+
+!!--- ETOPO5 5-minute model, smoothed Harvard version
+!! size of topography and bathymetry file
+! integer, parameter :: NX_BATHY = 4320,NY_BATHY = 2160
+!! resolution of topography file in minutes
+! integer, parameter :: RESOLUTION_TOPO_FILE = 5
+!! pathname of the topography file
+! character(len=*), parameter :: PATHNAME_TOPO_FILE = 'DATA/topo_bathy/topo_bathy_etopo5_smoothed_Harvard.dat'
+
+!--- ETOPO4 4-minute model created by subsampling and smoothing etopo-2
+! size of topography and bathymetry file
+ integer, parameter :: NX_BATHY = 5400,NY_BATHY = 2700
+!!!!!!!!!! integer, parameter :: NX_BATHY = 1,NY_BATHY = 1
+! resolution of topography file in minutes
+ integer, parameter :: RESOLUTION_TOPO_FILE = 4
+! pathname of the topography file
+! character(len=*), parameter :: PATHNAME_TOPO_FILE = 'DATA/topo_bathy/topo_bathy_etopo4_smoothed_window_7.dat'
+ character(len=*), parameter :: PATHNAME_TOPO_FILE = 'DATA/topo_bathy/topo_bathy_etopo4_smoothed_window_11_minmax_3500.dat'
+
+!!--- ETOPO2 2-minute model, not implemented yet
+!! size of topography and bathymetry file
+! integer, parameter :: NX_BATHY = 10800,NY_BATHY = 5400
+!! resolution of topography file in minutes
+! integer, parameter :: RESOLUTION_TOPO_FILE = 2
+!! pathname of the topography file
+! character(len=*), parameter :: PATHNAME_TOPO_FILE = 'DATA/topo_bathy/topo_bathy_etopo2_smoothed_window7.dat'
+
+! minimum thickness in meters to include the effect of the oceans and topo
+ double precision, parameter :: MINIMUM_THICKNESS_3D_OCEANS = 100.d0
+
+! number of GLL points in each direction of an element (degree plus one)
+ integer, parameter :: NGLLX = 5
+ integer, parameter :: NGLLY = NGLLX
+ integer, parameter :: NGLLZ = NGLLX
+
+! flag to exclude elements that are too far from target in source detection
+ logical, parameter :: USE_DISTANCE_CRITERION = .true.
+
+! flag to display detailed information about location of stations
+ logical, parameter :: DISPLAY_DETAILS_STATIONS = .false.
+
+! maximum length of station and network name for receivers
+ integer, parameter :: MAX_LENGTH_STATION_NAME = 32
+ integer, parameter :: MAX_LENGTH_NETWORK_NAME = 8
+
+! we mimic a triangle of half duration equal to half_duration_triangle
+! using a Gaussian having a very close shape, as explained in Figure 4.2
+! of the manual. This source decay rate to mimic an equivalent triangle
+! was found by trial and error
+ double precision, parameter :: SOURCE_DECAY_MIMIC_TRIANGLE = 1.628d0
+
+! maximum number of sources to locate simultaneously (do not set it too high otherwise you will use a lot of memory)
+ integer, parameter :: NSOURCES_SUBSET_MAX = 100
+
+! distance threshold (in km) above which we consider that a receiver
+! is located outside the mesh and therefore excluded from the station list
+ double precision, parameter :: THRESHOLD_EXCLUDE_STATION = 50.d0
+
+! the first doubling is implemented right below the Moho
+! it seems optimal to implement the three other doublings at these depths
+! in the mantle
+ double precision, parameter :: DEPTH_SECOND_DOUBLING_OPTIMAL = 1650000.d0
+! in the outer core
+ double precision, parameter :: DEPTH_THIRD_DOUBLING_OPTIMAL = 3860000.d0
+! in the outer core
+ double precision, parameter :: DEPTH_FOURTH_DOUBLING_OPTIMAL = 5000000.d0
+
+! Boundary Mesh -- save Moho, 400, 670 km discontinuity topology files (in
+! the mesher) and use them for the computation of boundary kernel (in the solver)
+ logical, parameter :: SAVE_BOUNDARY_MESH = .false.
+
+! this parameter must be set to .true. to compute anisotropic kernels
+! in crust and mantle (related to the 21 Cij in geographical coordinates)
+! default is .false. to compute isotropic kernels (related to alpha and beta)
+ logical, parameter :: ANISOTROPIC_KL = .false.
+
+! print date and time estimate of end of run in another country,
+! in addition to local time.
+! For instance: the code runs at Caltech in California but the person
+! running the code is connected remotely from France, which has 9 hours more.
+! The time difference with that remote location can be positive or negative
+ logical, parameter :: ADD_TIME_ESTIMATE_ELSEWHERE = .false.
+ integer, parameter :: HOURS_TIME_DIFFERENCE = +9
+ integer, parameter :: MINUTES_TIME_DIFFERENCE = +0
+
+!
+!--- debugging flags
+!
+
+! flags to actually assemble with MPI or not
+! and to actually match fluid and solid regions of the Earth or not
+! should always be set to true except when debugging code
+ logical, parameter :: ACTUALLY_ASSEMBLE_MPI_SLICES = .true.
+ logical, parameter :: ACTUALLY_ASSEMBLE_MPI_CHUNKS = .true.
+ logical, parameter :: ACTUALLY_COUPLE_FLUID_CMB = .true.
+ logical, parameter :: ACTUALLY_COUPLE_FLUID_ICB = .true.
+
+! flag to turn off the conversion of geographic to geocentric coordinates for
+! the seismic source and the stations; i.e. assume a perfect sphere, which
+! can be useful for benchmarks of a spherical Earth with fictitious sources and stations
+ logical, parameter :: ASSUME_PERFECT_SPHERE = .false.
+
+! flag to only create the mesh but not start the solver (for instance to check the mesh obtained)
+ logical, parameter :: MESHER_ONLY = .false.
+
+! flag to put a fictitious source in each region in the case of a serial test
+ logical, parameter :: PUT_SOURCE_IN_EACH_REGION = .false.
+
+!------------------------------------------------------
+!----------- do not modify anything below -------------
+!------------------------------------------------------
+
+! on some processors (e.g. Pentiums) it is necessary to suppress underflows
+! by using a small initial field instead of zero
+ logical, parameter :: FIX_UNDERFLOW_PROBLEM = .true.
+
+! some useful constants
+ double precision, parameter :: PI = 3.141592653589793d0
+ double precision, parameter :: TWO_PI = 2.d0 * PI
+ double precision, parameter :: PI_OVER_FOUR = PI / 4.d0
+
+! to convert angles from degrees to radians
+ double precision, parameter :: DEGREES_TO_RADIANS = PI / 180.d0
+
+! 3-D simulation
+ integer, parameter :: NDIM = 3
+
+! dimension of the boundaries of the slices
+ integer, parameter :: NDIM2D = 2
+
+! number of nodes for 2D and 3D shape functions for hexahedra with 27 nodes
+ integer, parameter :: NGNOD = 27, NGNOD2D = 9
+
+! gravitational constant
+ double precision, parameter :: GRAV = 6.6723d-11
+
+! a few useful constants
+ double precision, parameter :: ZERO = 0.d0,ONE = 1.d0,TWO = 2.d0,HALF = 0.5d0
+
+ real(kind=CUSTOM_REAL), parameter :: &
+ ONE_THIRD = 1._CUSTOM_REAL/3._CUSTOM_REAL, &
+ TWO_THIRDS = 2._CUSTOM_REAL/3._CUSTOM_REAL, &
+ FOUR_THIRDS = 4._CUSTOM_REAL/3._CUSTOM_REAL
+
+! very large and very small values
+ double precision, parameter :: HUGEVAL = 1.d+30,TINYVAL = 1.d-9
+
+! very large real value declared independently of the machine
+ real(kind=CUSTOM_REAL), parameter :: HUGEVAL_SNGL = 1.e+30_CUSTOM_REAL
+
+! very large integer value
+ integer, parameter :: HUGEINT = 100000000
+
+! normalized radius of free surface
+ double precision, parameter :: R_UNIT_SPHERE = ONE
+
+! same radius in km
+ double precision, parameter :: R_EARTH_KM = R_EARTH / 1000.d0
+
+! fixed thickness of 3 km for PREM oceans
+ double precision, parameter :: THICKNESS_OCEANS_PREM = 3000.d0 / R_EARTH
+
+! shortest radius at which crust is implemented (80 km depth)
+! to be constistent with the D80 discontinuity, we impose the crust only above it
+ double precision, parameter :: R_DEEPEST_CRUST = (R_EARTH - 80000.d0) / R_EARTH
+
+! maximum number of chunks (full sphere)
+ integer, parameter :: NCHUNKS_MAX = 6
+
+! define block type based upon chunk number (between 1 and 6)
+! do not change this numbering, chunk AB must be number 1 for central cube
+ integer, parameter :: CHUNK_AB = 1
+ integer, parameter :: CHUNK_AC = 2
+ integer, parameter :: CHUNK_BC = 3
+ integer, parameter :: CHUNK_AC_ANTIPODE = 4
+ integer, parameter :: CHUNK_BC_ANTIPODE = 5
+ integer, parameter :: CHUNK_AB_ANTIPODE = 6
+
+! maximum number of regions in the mesh
+ integer, parameter :: MAX_NUM_REGIONS = 3
+
+! define flag for regions of the global Earth mesh
+ integer, parameter :: IREGION_CRUST_MANTLE = 1
+ integer, parameter :: IREGION_OUTER_CORE = 2
+ integer, parameter :: IREGION_INNER_CORE = 3
+
+! define flag for elements
+ integer, parameter :: IFLAG_CRUST = 1
+
+ integer, parameter :: IFLAG_80_MOHO = 2
+ integer, parameter :: IFLAG_220_80 = 3
+ integer, parameter :: IFLAG_670_220 = 4
+ integer, parameter :: IFLAG_MANTLE_NORMAL = 5
+
+ integer, parameter :: IFLAG_OUTER_CORE_NORMAL = 6
+
+ integer, parameter :: IFLAG_INNER_CORE_NORMAL = 7
+ integer, parameter :: IFLAG_MIDDLE_CENTRAL_CUBE = 8
+ integer, parameter :: IFLAG_BOTTOM_CENTRAL_CUBE = 9
+ integer, parameter :: IFLAG_TOP_CENTRAL_CUBE = 10
+ integer, parameter :: IFLAG_IN_FICTITIOUS_CUBE = 11
+
+ integer, parameter :: NSPEC2D_XI_SUPERBRICK = 8
+ integer, parameter :: NSPEC2D_ETA_SUPERBRICK = 8
+ integer, parameter :: NSPEC2D_XI_SUPERBRICK_1L = 6
+ integer, parameter :: NSPEC2D_ETA_SUPERBRICK_1L = 6
+
+! dummy flag used for mesh display purposes only
+ integer, parameter :: IFLAG_DUMMY = 100
+
+! max number of layers that are used in the radial direction to build the full mesh
+ integer, parameter :: MAX_NUMBER_OF_MESH_LAYERS = 15
+
+! define number of spectral elements and points in basic symmetric mesh doubling superbrick
+ integer, parameter :: NSPEC_DOUBLING_SUPERBRICK = 32
+ integer, parameter :: NGLOB_DOUBLING_SUPERBRICK = 67
+ integer, parameter :: NSPEC_SUPERBRICK_1L = 28
+ integer, parameter :: NGLOB_SUPERBRICK_1L = 58
+ integer, parameter :: NGNOD_EIGHT_CORNERS = 8
+
+! define flag for reference 1D Earth model
+ integer, parameter :: REFERENCE_MODEL_PREM = 1
+ integer, parameter :: REFERENCE_MODEL_IASP91 = 2
+ integer, parameter :: REFERENCE_MODEL_1066A = 3
+ integer, parameter :: REFERENCE_MODEL_AK135 = 4
+ integer, parameter :: REFERENCE_MODEL_REF = 5
+ integer, parameter :: REFERENCE_MODEL_JP1D = 6
+ integer, parameter :: REFERENCE_MODEL_SEA1D = 7
+
+! define flag for 3D Earth model
+ integer, parameter :: THREE_D_MODEL_S20RTS = 1
+ integer, parameter :: THREE_D_MODEL_S362ANI = 2
+ integer, parameter :: THREE_D_MODEL_S362WMANI = 3
+ integer, parameter :: THREE_D_MODEL_S362ANI_PREM = 4
+ integer, parameter :: THREE_D_MODEL_S29EA = 5
+ integer, parameter :: THREE_D_MODEL_SEA99_JP3D = 6
+ integer, parameter :: THREE_D_MODEL_SEA99 = 7
+ integer, parameter :: THREE_D_MODEL_JP3D = 8
+
+! define flag for regions of the global Earth for attenuation
+ integer, parameter :: NUM_REGIONS_ATTENUATION = 5
+
+ integer, parameter :: IREGION_ATTENUATION_INNER_CORE = 1
+ integer, parameter :: IREGION_ATTENUATION_CMB_670 = 2
+ integer, parameter :: IREGION_ATTENUATION_670_220 = 3
+ integer, parameter :: IREGION_ATTENUATION_220_80 = 4
+ integer, parameter :: IREGION_ATTENUATION_80_SURFACE = 5
+ integer, parameter :: IREGION_ATTENUATION_UNDEFINED = 6
+
+! number of standard linear solids for attenuation
+ integer, parameter :: N_SLS = 3
+
+! computation of standard linear solids in meshfem3D
+! ATTENUATION_COMP_RESOLUTION: Number of Digits after decimal
+! ATTENUATION_COMP_MAXIMUM: Maximum Q Value
+ integer, parameter :: ATTENUATION_COMP_RESOLUTION = 1
+ integer, parameter :: ATTENUATION_COMP_MAXIMUM = 5000
+
+! for lookup table for attenuation every 100 m in radial direction of Earth model
+ integer, parameter :: NRAD_ATTENUATION = 70000
+ double precision, parameter :: TABLE_ATTENUATION = R_EARTH_KM * 10.0d0
+
+!!!!!!!!!!!!!! for determination of the attenuation period range
+!!!!!!!!!!!!!! if this is set to .true. then the hardcoded values will be used
+!!!!!!!!!!!!!! otherwise they are computed automatically from the number of elements
+!!!!!!!!!!!!!! This *may* be a useful parameter for benchmarking against older versions
+!!!!!!!!!!!!! logical, parameter :: ATTENUATION_RANGE_PREDEFINED = .false.
+
+! flag for the four edges of each slice and for the bottom edge
+ integer, parameter :: XI_MIN = 1
+ integer, parameter :: XI_MAX = 2
+ integer, parameter :: ETA_MIN = 3
+ integer, parameter :: ETA_MAX = 4
+ integer, parameter :: BOTTOM = 5
+
+! flags to select the right corner in each slice
+ integer, parameter :: ILOWERLOWER = 1
+ integer, parameter :: ILOWERUPPER = 2
+ integer, parameter :: IUPPERLOWER = 3
+ integer, parameter :: IUPPERUPPER = 4
+
+! number of points in each AVS or OpenDX quadrangular cell for movies
+ integer, parameter :: NGNOD2D_AVS_DX = 4
+
+! number of faces a given slice can share with other slices
+! this is at most 2, except when there is only once slice per chunk
+! in which case it is 4
+ integer, parameter :: NUMFACES_SHARED = 2 !!!!! DK DK removed support for one slice only 4
+
+! number of corners a given slice can share with other slices
+! this is at most 1, except when there is only once slice per chunk
+! in which case it is 4
+ integer, parameter :: NUMCORNERS_SHARED = 1 !!!!!! DK DK removed support for one slice only 4
+
+! number of layers in PREM
+ integer, parameter :: NR = 640
+
+! smallest real number on many machines = 1.1754944E-38
+! largest real number on many machines = 3.4028235E+38
+! small negligible initial value to avoid very slow underflow trapping
+! but not too small to avoid trapping on velocity and acceleration in Newmark
+ real(kind=CUSTOM_REAL), parameter :: VERYSMALLVAL = 1.E-24_CUSTOM_REAL
+
+! displacement threshold above which we consider that the code became unstable
+ real(kind=CUSTOM_REAL), parameter :: STABILITY_THRESHOLD = 1.E+25_CUSTOM_REAL
+
+! geometrical tolerance for boundary detection
+ double precision, parameter :: SMALLVAL = 0.00001d0
+
+! small tolerance for conversion from x y z to r theta phi
+ double precision, parameter :: SMALL_VAL_ANGLE = 1.d-10
+
+! geometry tolerance parameter to calculate number of independent grid points
+! sensitive to actual size of model, assumes reference sphere of radius 1
+! this is an absolute value for normalized coordinates in the Earth
+ double precision, parameter :: SMALLVALTOL = 1.d-10
+
+! do not use tags for MPI messages, use dummy tag instead
+ integer, parameter :: itag = 0,itag2 = 0
+
+! for the Gauss-Lobatto-Legendre points and weights
+ double precision, parameter :: GAUSSALPHA = 0.d0,GAUSSBETA = 0.d0
+
+! number of lines per source in CMTSOLUTION file
+ integer, parameter :: NLINES_PER_CMTSOLUTION_SOURCE = 13
+
+! number of iterations to solve the non linear system for xi and eta
+ integer, parameter :: NUM_ITER = 4
+
+! number of hours per day for rotation rate of the Earth
+ double precision, parameter :: HOURS_PER_DAY = 24.d0
+
+! for lookup table for gravity every 100 m in radial direction of Earth model
+ integer, parameter :: NRAD_GRAVITY = 70000
+
+! number of layers in DATA/1066a/1066a.dat
+ integer, parameter :: NR_1066A = 160
+
+! number of layers in DATA/ak135/ak135.dat
+ integer, parameter :: NR_AK135 = 144
+
+! number of layers in DATA/s362ani/REF
+ integer, parameter :: NR_REF = 750
+
+! number of layers in DATA/Lebedev_sea99 1D model
+ integer, parameter :: NR_SEA1D = 163
+
+! three_d_mantle_model_constants
+ integer, parameter :: NK = 20,NS = 20,ND = 1
+
+! Japan 3D model (Zhao, 1994) constants
+ integer, parameter :: MPA=42,MRA=48,MHA=21,MPB=42,MRB=48,MHB=18
+ integer, parameter :: MKA=2101,MKB=2101
+
+! The meaningful range of Zhao et al.'s model (1994) is as follows:
+! latitude : 32 - 45 N
+! longitude: 130-145 E
+! depth : 0 - 500 km
+! The deepest Moho beneath Japan is 40 km
+ double precision,parameter :: LAT_MAX = 45.d0
+ double precision,parameter :: LAT_MIN = 32.d0
+ double precision,parameter :: LON_MAX = 145.d0
+ double precision,parameter :: LON_MIN = 130.d0
+ double precision,parameter :: DEP_MAX = 500.d0
+
+! use sedimentary layers of crust 2.0
+ logical, parameter :: INCLUDE_SEDIMENTS_CRUST = .true.
+
+! number of points per degree in smoothed crust2.0
+ integer, parameter :: NFACTOR_CRUST = 2
+ integer, parameter :: NLON_CRUST = 180 * NFACTOR_CRUST
+ integer, parameter :: NLAT_CRUST = 90 * NFACTOR_CRUST
+
+! to inflate the central cube (set to 0.d0 for a non-inflated cube)
+ double precision, parameter :: CENTRAL_CUBE_INFLATE_FACTOR = 0.41d0
+
+! for the stretching of crustal elements in the case of 3D models
+ double precision, parameter :: MAX_RATIO_CRUST_STRETCHING = 0.6d0
+
+! to suppress the crustal layers (replaced by an extension of the mantle: R_EARTH is not modified, but no more crustal doubling)
+ logical, parameter :: SUPPRESS_CRUSTAL_MESH = .false.
+
+! to add a fourth doubling at the bottom of the outer core
+ logical, parameter :: ADD_4TH_DOUBLING = .false.
+
+! parameters to cut the doubling brick
+
+! this to cut the superbrick: 3 possibilities, 4 cases max / possibility
+! three possibilities: (cut in xi and eta) or (cut in xi) or (cut in eta)
+! case 1: (ximin and etamin) or ximin or etamin
+! case 2: (ximin and etamax) or ximax or etamax
+! case 3: ximax and etamin
+! case 4: ximax and etamax
+ integer, parameter :: NB_CUT_CASE = 4
+
+! corner 1: ximin and etamin
+! corner 2: ximax and etamin
+! corner 3: ximax and etamax
+! corner 4: ximin and etamax
+ integer, parameter :: NB_SQUARE_CORNERS = 4
+
+! two possibilities: xi or eta
+! face 1: ximin or etamin
+! face 2: ximax or etamax
+ integer, parameter :: NB_SQUARE_EDGES_ONEDIR = 2
+
+! this for the geometry of the basic doubling brick
+ integer, parameter :: NSPEC_DOUBLING_BASICBRICK = 8
+ integer, parameter :: NGLOB_DOUBLING_BASICBRICK = 27
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/continent_boundaries_gmt.dat
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/continent_boundaries_gmt.dat (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/continent_boundaries_gmt.dat 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,5593 @@
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+> Shore Bin # 16, Level 1
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+> Shore Bin # 16, Level 1
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+20 63.5247
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+> Shore Bin # 18, Level 1
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+> Shore Bin # 19, Level 1
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+> Shore Bin # 19, Level 1
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+40 65.0918
+> Shore Bin # 19, Level 1
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+20 69.3216
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+> Shore Bin # 20, Level 1
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+> Shore Bin # 20, Level 1
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+> Shore Bin # 21, Level 1
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+> Shore Bin # 21, Level 1
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+> Shore Bin # 21, Level 2
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+> Shore Bin # 22, Level 1
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+> Shore Bin # 23, Level 2
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+> Shore Bin # 23, Level 2
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+> Shore Bin # 23, Level 2
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+> Shore Bin # 24, Level 2
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+> Shore Bin # 24, Level 2
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+> Shore Bin # 24, Level 2
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+> Shore Bin # 25, Level 1
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+> Shore Bin # 25, Level 1
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+> Shore Bin # 25, Level 1
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+> Shore Bin # 25, Level 1
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+> Shore Bin # 25, Level 1
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+> Shore Bin # 26, Level 1
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+> Shore Bin # 26, Level 1
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+> Shore Bin # 26, Level 1
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+> Shore Bin # 26, Level 1
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+> Shore Bin # 27, Level 1
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+> Shore Bin # 27, Level 1
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+> Shore Bin # 27, Level 1
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+> Shore Bin # 28, Level 1
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+> Shore Bin # 28, Level 1
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+> Shore Bin # 28, Level 1
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+> Shore Bin # 29, Level 1
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+> Shore Bin # 29, Level 1
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+> Shore Bin # 29, Level 1
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+> Shore Bin # 29, Level 1
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+> Shore Bin # 29, Level 1
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+> Shore Bin # 29, Level 1
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+> Shore Bin # 30, Level 1
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+> Shore Bin # 30, Level 2
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+> Shore Bin # 30, Level 2
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+> Shore Bin # 30, Level 2
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+> Shore Bin # 31, Level 1
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+> Shore Bin # 31, Level 1
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+> Shore Bin # 31, Level 1
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+> Shore Bin # 31, Level 1
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+> Shore Bin # 31, Level 1
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+> Shore Bin # 31, Level 1
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+> Shore Bin # 32, Level 1
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+> Shore Bin # 33, Level 1
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+> Shore Bin # 33, Level 1
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+> Shore Bin # 38, Level 2
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+> Shore Bin # 38, Level 2
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+> Shore Bin # 41, Level 1
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+> Shore Bin # 42, Level 1
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_DX_to_AVS_slices.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_DX_to_AVS_slices.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_DX_to_AVS_slices.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,78 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 1
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! August 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+ program convert_DX_to_AVS_slices
+
+ implicit none
+
+ integer, parameter :: npoin = 1722, nelem = 1612
+
+ integer i1,i2,i3,i4,ipoin,ielem
+
+ real x,y,z,datavalue
+
+! skip DX header
+ read(*,*)
+
+! write AVS header
+ write(*,*) npoin,' ',nelem,' 0 1 0'
+
+! read and write the points
+ do ipoin = 1,npoin
+ read(*,*) x,y,z
+ write(*,*) ipoin,x,y,z
+ enddo
+
+! skip DX header
+ read(*,*)
+
+! read and write the elements
+! in the case of OpenDX, node numbers start at zero
+! in the case of AVS, node numbers start at one
+! point order in OpenDX is 1,4,2,3 *not* 1,2,3,4 as in AVS
+ do ielem = 1,nelem
+ read(*,*) i1,i4,i2,i3
+ write(*,*) ielem,' 1 quad ',i1+1,i2+1,i3+1,i4+1
+ enddo
+
+! skip DX header
+ read(*,*)
+ read(*,*)
+ read(*,*)
+
+! write AVS header
+ write(*,*) '1 1'
+ write(*,*) 'Zcoord, meters'
+
+! read and write the element data
+ do ielem = 1,nelem
+ read(*,*) datavalue
+ write(*,*) ielem,datavalue
+ enddo
+
+ end program convert_DX_to_AVS_slices
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_DX_to_AVS_surface.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_DX_to_AVS_surface.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_DX_to_AVS_surface.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,78 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 1
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! August 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+ program convert_DX_to_AVS_slices
+
+ implicit none
+
+ integer, parameter :: npoin = 8036, nelem = 7680
+
+ integer :: i1,i2,i3,i4,datavalue,ipoin,ielem
+
+ real x,y,z
+
+! skip DX header
+ read(*,*)
+
+! write AVS header
+ write(*,*) npoin,' ',nelem,' 1 0 0'
+
+! read and write the points
+ do ipoin = 1,npoin
+ read(*,*) x,y,z
+ write(*,*) ipoin,x,y,z
+ enddo
+
+! skip DX header
+ read(*,*)
+
+! read and write the elements
+! in the case of OpenDX, node numbers start at zero
+! in the case of AVS, node numbers start at one
+! point order in OpenDX is 1,4,2,3 *not* 1,2,3,4 as in AVS
+ do ielem = 1,nelem
+ read(*,*) i1,i4,i2,i3
+ write(*,*) ielem,' 1 quad ',i1+1,i2+1,i3+1,i4+1
+ enddo
+
+! skip DX header
+ read(*,*)
+ read(*,*)
+ read(*,*)
+
+! write AVS header
+ write(*,*) '1 1'
+ write(*,*) 'Zcoord, meters'
+
+! read and write the point data
+ do ipoin = 1,npoin
+ read(*,*) datavalue
+ write(*,*) ipoin,datavalue
+ enddo
+
+ end program convert_DX_to_AVS_slices
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_avs2dx_quads.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_avs2dx_quads.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_avs2dx_quads.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,92 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 1
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! August 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+ program convert_avs2dx_quads
+
+! convert AVS files composed of quadrangles ("quads") to OpenDX file format
+
+! Dimitri Komatitsch, University of Pau, January 2007
+
+ implicit none
+
+! maximum number of points in the AVS file
+ integer, parameter :: maxpoints = 10000000
+
+ real x(maxpoints)
+ real y(maxpoints)
+ real z(maxpoints)
+
+ integer icorresp(maxpoints)
+
+ integer :: npoin,nspec,ipoin,ispec,idum1,idum2,i1,i2,i3,i4
+
+! filter "quad" from AVS file
+ call system('sed -e ''1,$s/quad//g'' < cubed_sphere_surface.inp > ____tutu')
+
+ open(unit=55,file='____tutu',status='old')
+
+ read(55,*) npoin,nspec
+
+ print *,'object 1 class array type float rank 1 shape 3 items ',npoin,' data follows'
+ do ipoin=1,npoin
+ read(55,*) i1,x(ipoin),y(ipoin),z(ipoin)
+ icorresp(i1) = ipoin
+ print *,x(ipoin),y(ipoin),z(ipoin)
+ enddo
+
+ print *,'object 2 class array type int rank 1 shape 4 items ',nspec,' data follows'
+ do ispec=1,nspec
+ read(55,*) idum1,idum2,i1,i2,i3,i4
+! point order in OpenDX is 1,4,2,3 *not* 1,2,3,4 as in AVS
+ print *,icorresp(i1)-1,icorresp(i4)-1,icorresp(i2)-1,icorresp(i3)-1
+ enddo
+
+! skip labels
+ read(55,*)
+ read(55,*)
+
+ close(55)
+
+ print *,'attribute "element type" string "quads"'
+ print *,'attribute "ref" string "positions"'
+ print *,'object 3 class array type float rank 0 items ',npoin,' data follows'
+ do ipoin=1,npoin
+ print *,ipoin
+ enddo
+
+ print *,'attribute "dep" string "positions"'
+ print *,'object "irregular positions irregular connections" class field'
+ print *,'component "positions" value 1'
+ print *,'component "connections" value 2'
+ print *,'component "data" value 3'
+ print *,'end'
+
+! remove temporary file
+ call system('rm -f ____tutu')
+
+ end program convert_avs2dx_quads
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_lat_long_epicenter_OpenDX.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_lat_long_epicenter_OpenDX.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_lat_long_epicenter_OpenDX.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,241 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 1
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! August 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+ program convert_epicenter_OpenDX
+!
+!--- convert the coordinates of the earthquake epicenter to OpenDX format
+!
+
+ implicit none
+
+ include "constants_topo.h"
+
+! small offset to add to the epicenter glyph (in meters)
+ double precision, parameter :: SMALL_OFFSET = 125000.d0
+
+! filter final surface using box filter
+ logical, parameter :: SMOOTH_THE_MODEL = .true.
+ integer, parameter :: SIZE_FILTER_ONE_SIDE = 5
+
+! use integer array to store values
+ integer ibathy_topo(NX_BATHY,NY_BATHY)
+ integer ibathy_topo_ori(NX_BATHY,NY_BATHY)
+
+ integer ix,iy,minvalue,maxvalue
+ integer ix_current,iy_current,ix_min,ix_max,iy_min,iy_max,ix_value,iy_value
+
+ double precision value_sum,area_window
+ double precision :: phi,theta,r,x,y,z,elevation
+
+ double precision :: long,lat
+
+!----
+
+! latitude and longitude of the epicenter
+ lat = 31.4400d0
+ long = 104.1000d0
+
+!----
+
+! read the topography file
+ print *,'NX_BATHY,NY_BATHY = ',NX_BATHY,NY_BATHY
+ print *,'file used has a resolution of ',RESOLUTION_TOPO_FILE,' minutes'
+
+ print *
+ print *,'reading topo file'
+
+ open(unit=13,file='topo_bathy_etopo4_from_etopo2_subsampled.dat',status='old')
+ do iy=1,NY_BATHY
+ do ix=1,NX_BATHY
+ read(13,*) ibathy_topo_ori(ix,iy)
+ enddo
+ enddo
+ close(13)
+
+! compute min and max before smoothing
+ minvalue = minval(ibathy_topo_ori)
+ maxvalue = maxval(ibathy_topo_ori)
+ print *,'min and max of topography before smoothing = ',minvalue,maxvalue
+
+!----
+
+! smooth topography/bathymetry model
+ if(SMOOTH_THE_MODEL) then
+
+ print *
+ print *,'smoothing topo file'
+ if(SIZE_FILTER_ONE_SIDE < 1) stop 'SIZE_FILTER_ONE_SIDE must be greater than 1 for filter'
+ print *,'size of window filter is ',2*SIZE_FILTER_ONE_SIDE+1,' x ',2*SIZE_FILTER_ONE_SIDE+1
+ area_window = dble((2*SIZE_FILTER_ONE_SIDE+1)**2)
+
+ do iy_current = 1,NY_BATHY
+
+ if(mod(iy_current,10) == 0) print *,'smoothing line ',iy_current,' out of ',NY_BATHY
+
+ do ix_current = 1,NX_BATHY
+
+ value_sum = 0.d0
+
+! compute min and max of window
+ ix_min = ix_current - SIZE_FILTER_ONE_SIDE
+ ix_max = ix_current + SIZE_FILTER_ONE_SIDE
+
+ iy_min = iy_current - SIZE_FILTER_ONE_SIDE
+ iy_max = iy_current + SIZE_FILTER_ONE_SIDE
+
+! loop on points in window to compute sum
+ do iy = iy_min,iy_max
+ do ix = ix_min,ix_max
+
+! copy current value
+ ix_value = ix
+ iy_value = iy
+
+! avoid edge effects, use periodic boundary in Xmin and Xmax
+ if(ix_value < 1) ix_value = ix_value + NX_BATHY
+ if(ix_value > NX_BATHY) ix_value = ix_value - NX_BATHY
+
+! avoid edge effects, use rigid boundary in Ymin and Ymax
+! *not* periodic, because South and North poles must not be merged
+ if(iy_value < 1) iy_value = 1
+ if(iy_value > NY_BATHY) iy_value = NY_BATHY
+
+! compute sum
+ value_sum = value_sum + dble(ibathy_topo_ori(ix_value,iy_value))
+
+ enddo
+ enddo
+
+! assign mean value to filtered point
+ ibathy_topo(ix_current,iy_current) = nint(value_sum / area_window)
+
+ enddo
+ enddo
+
+ else
+
+! no smoothing
+ ibathy_topo = ibathy_topo_ori
+
+ endif
+
+!----
+
+! compute min and max after smoothing
+ minvalue = minval(ibathy_topo)
+ maxvalue = maxval(ibathy_topo)
+ print *,'min and max of topography after smoothing = ',minvalue,maxvalue
+
+! store file in OpenDX format
+
+! create the OpenDX file
+ print *
+ print *,'creating OpenDX file'
+
+! creating the header
+ open(unit=11,file='epicenter.dx',status='unknown')
+
+! write point coordinates
+ write(11,*) 'object 1 class array type float rank 1 shape 3 items 1 data follows'
+!! DK DK in principle this should take the ellipticity of the Earth into account
+ phi = long * PI / 180.d0
+ theta = (90.d0 - lat) * PI / 180.d0
+
+! use an Earth model of mean radius equal to 1, and add elevation to each point, amplified in order to see it
+ call get_topo_bathy(lat,long,elevation,ibathy_topo)
+ r = (R_EARTH + EXAGGERATION_FACTOR_TOPO * elevation + SMALL_OFFSET) / R_EARTH
+
+ x = r*sin(theta)*cos(phi)
+ y = r*sin(theta)*sin(phi)
+ z = r*cos(theta)
+
+ write(11,*) sngl(x),sngl(y),sngl(z)
+
+! write elements
+ write(11,*) 'object 2 class array type int rank 1 shape 2 items 1 data follows'
+! point numbers start at 0 in OpenDX, not 1 as in AVS
+ write(11,*) '0 0'
+
+ write(11,*) 'attribute "element type" string "lines"'
+ write(11,*) 'attribute "ref" string "positions"'
+ write(11,*) 'object 3 class array type float rank 0 items 1 data follows'
+
+! write data values (size of the glyph, therefore do NOT set it to 0)
+ write(11,*) '2'
+
+! define OpenDX field
+ write(11,*) 'attribute "dep" string "positions"'
+ write(11,*) 'object "irregular positions irregular connections" class field'
+ write(11,*) 'component "positions" value 1'
+ write(11,*) 'component "connections" value 2'
+ write(11,*) 'component "data" value 3'
+ write(11,*) 'end'
+
+ close(11)
+
+ end program convert_epicenter_OpenDX
+
+!----------------------------
+
+ subroutine get_topo_bathy(xlat,xlon,value,ibathy_topo)
+
+!
+!---- get elevation or ocean depth in meters at a given latitude and longitude
+!
+
+ implicit none
+
+ include "constants_topo.h"
+
+! use integer array to store values
+ integer, dimension(NX_BATHY,NY_BATHY) :: ibathy_topo
+
+ double precision xlat,xlon,value
+
+ integer iadd1,iel1
+ double precision samples_per_degree_topo
+ double precision xlo
+
+ xlo = xlon
+ if(xlon < 0.d0) xlo = xlo + 360.d0
+
+! compute number of samples per degree
+ samples_per_degree_topo = dble(RESOLUTION_TOPO_FILE) / 60.d0
+
+! compute offset in data file and avoid edge effects
+ iadd1 = 1 + int((90.d0-xlat)/samples_per_degree_topo)
+ if(iadd1 < 1) iadd1 = 1
+ if(iadd1 > NY_BATHY) iadd1 = NY_BATHY
+
+ iel1 = int(xlo/samples_per_degree_topo)
+ if(iel1 <= 0 .or. iel1 > NX_BATHY) iel1 = NX_BATHY
+
+! convert integer value to double precision
+ value = dble(ibathy_topo(iel1,iadd1))
+
+ end subroutine get_topo_bathy
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_lat_long_main_cities_OpenDX.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_lat_long_main_cities_OpenDX.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_lat_long_main_cities_OpenDX.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,261 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 1
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! August 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+ program convert_lat_long_cities_OpenDX
+!
+!--- convert the coordinates of the main cities in the world to OpenDX format
+!--- the original list of cities is taken from http://www.stutzfamily.com/mrstutz/LatLong/latlonglist.htm
+!
+
+ implicit none
+
+ include "constants_topo.h"
+
+! number of cities in input file
+ integer, parameter :: N_CITIES = 232
+
+! filter final surface using box filter
+ logical, parameter :: SMOOTH_THE_MODEL = .true.
+ integer, parameter :: SIZE_FILTER_ONE_SIDE = 5
+
+! use integer array to store values
+ integer ibathy_topo(NX_BATHY,NY_BATHY)
+ integer ibathy_topo_ori(NX_BATHY,NY_BATHY)
+
+ integer ix,iy,minvalue,maxvalue,icity
+ integer ix_current,iy_current,ix_min,ix_max,iy_min,iy_max,ix_value,iy_value
+ integer :: idegrees_lat,iminutes_lat,icode_lat,idegrees_long,iminutes_long,icode_long
+
+ double precision value_sum,area_window
+ double precision :: phi,theta,r,x,y,z,elevation
+
+ double precision, dimension(N_CITIES) :: long,lat
+
+!----
+
+! read the city file
+! in the input file, 3000 is North, 6000 is South, 9000 is East and 12000 is West
+ print *,'city file used contains ',N_CITIES,' cities'
+ print *,'reading the city file'
+ open(unit=13,file='lat_long_main_cities_processed.dat',status='old')
+ do icity=1,N_CITIES
+ read(13,*) idegrees_lat,iminutes_lat,icode_lat,idegrees_long,iminutes_long,icode_long
+
+ lat(icity) = idegrees_lat + iminutes_lat/60.d0
+ if(icode_lat == 6000) lat(icity) = - lat(icity)
+
+ long(icity) = idegrees_long + iminutes_long/60.d0
+ if(icode_long == 12000) long(icity) = - long(icity)
+
+ enddo
+ close(13)
+
+!----
+
+! read the topography file
+ print *,'NX_BATHY,NY_BATHY = ',NX_BATHY,NY_BATHY
+ print *,'file used has a resolution of ',RESOLUTION_TOPO_FILE,' minutes'
+
+ print *
+ print *,'reading topo file'
+
+ open(unit=13,file='topo_bathy_etopo4_from_etopo2_subsampled.dat',status='old')
+ do iy=1,NY_BATHY
+ do ix=1,NX_BATHY
+ read(13,*) ibathy_topo_ori(ix,iy)
+ enddo
+ enddo
+ close(13)
+
+! compute min and max before smoothing
+ minvalue = minval(ibathy_topo_ori)
+ maxvalue = maxval(ibathy_topo_ori)
+ print *,'min and max of topography before smoothing = ',minvalue,maxvalue
+
+!----
+
+! smooth topography/bathymetry model
+ if(SMOOTH_THE_MODEL) then
+
+ print *
+ print *,'smoothing topo file'
+ if(SIZE_FILTER_ONE_SIDE < 1) stop 'SIZE_FILTER_ONE_SIDE must be greater than 1 for filter'
+ print *,'size of window filter is ',2*SIZE_FILTER_ONE_SIDE+1,' x ',2*SIZE_FILTER_ONE_SIDE+1
+ area_window = dble((2*SIZE_FILTER_ONE_SIDE+1)**2)
+
+ do iy_current = 1,NY_BATHY
+
+ if(mod(iy_current,10) == 0) print *,'smoothing line ',iy_current,' out of ',NY_BATHY
+
+ do ix_current = 1,NX_BATHY
+
+ value_sum = 0.d0
+
+! compute min and max of window
+ ix_min = ix_current - SIZE_FILTER_ONE_SIDE
+ ix_max = ix_current + SIZE_FILTER_ONE_SIDE
+
+ iy_min = iy_current - SIZE_FILTER_ONE_SIDE
+ iy_max = iy_current + SIZE_FILTER_ONE_SIDE
+
+! loop on points in window to compute sum
+ do iy = iy_min,iy_max
+ do ix = ix_min,ix_max
+
+! copy current value
+ ix_value = ix
+ iy_value = iy
+
+! avoid edge effects, use periodic boundary in Xmin and Xmax
+ if(ix_value < 1) ix_value = ix_value + NX_BATHY
+ if(ix_value > NX_BATHY) ix_value = ix_value - NX_BATHY
+
+! avoid edge effects, use rigid boundary in Ymin and Ymax
+! *not* periodic, because South and North poles must not be merged
+ if(iy_value < 1) iy_value = 1
+ if(iy_value > NY_BATHY) iy_value = NY_BATHY
+
+! compute sum
+ value_sum = value_sum + dble(ibathy_topo_ori(ix_value,iy_value))
+
+ enddo
+ enddo
+
+! assign mean value to filtered point
+ ibathy_topo(ix_current,iy_current) = nint(value_sum / area_window)
+
+ enddo
+ enddo
+
+ else
+
+! no smoothing
+ ibathy_topo = ibathy_topo_ori
+
+ endif
+
+!----
+
+! compute min and max after smoothing
+ minvalue = minval(ibathy_topo)
+ maxvalue = maxval(ibathy_topo)
+ print *,'min and max of topography after smoothing = ',minvalue,maxvalue
+
+! store file in OpenDX format
+
+! create the OpenDX file
+ print *
+ print *,'creating OpenDX file'
+
+! creating the header
+ open(unit=11,file='earth_main_cities.dx',status='unknown')
+
+! write point coordinates
+ write(11,*) 'object 1 class array type float rank 1 shape 3 items ',N_CITIES,' data follows'
+ do icity = 1,N_CITIES
+
+!! DK DK in principle this should take the ellipticity of the Earth into account
+ phi = long(icity) * PI / 180.d0
+ theta = (90.d0 - lat(icity)) * PI / 180.d0
+
+! use an Earth model of mean radius equal to 1, and add elevation to each point, amplified in order to see it
+ call get_topo_bathy(lat(icity),long(icity),elevation,ibathy_topo)
+ r = (R_EARTH + EXAGGERATION_FACTOR_TOPO * elevation) / R_EARTH
+
+ x = r*sin(theta)*cos(phi)
+ y = r*sin(theta)*sin(phi)
+ z = r*cos(theta)
+
+ write(11,*) sngl(x),sngl(y),sngl(z)
+ enddo
+
+! write elements
+ write(11,*) 'object 2 class array type int rank 1 shape 2 items 1 data follows'
+! point numbers start at 0 in OpenDX, not 1 as in AVS
+ write(11,*) '0 0'
+
+ write(11,*) 'attribute "element type" string "lines"'
+ write(11,*) 'attribute "ref" string "positions"'
+ write(11,*) 'object 3 class array type float rank 0 items ',N_CITIES,' data follows'
+
+! write data values (size of the glyph, therefore do NOT set it to 0)
+ do icity = 1,N_CITIES
+ write(11,*) '1'
+ enddo
+
+! define OpenDX field
+ write(11,*) 'attribute "dep" string "positions"'
+ write(11,*) 'object "irregular positions irregular connections" class field'
+ write(11,*) 'component "positions" value 1'
+ write(11,*) 'component "connections" value 2'
+ write(11,*) 'component "data" value 3'
+ write(11,*) 'end'
+
+ close(11)
+
+ end program convert_lat_long_cities_OpenDX
+
+!----------------------------
+
+ subroutine get_topo_bathy(xlat,xlon,value,ibathy_topo)
+
+!
+!---- get elevation or ocean depth in meters at a given latitude and longitude
+!
+
+ implicit none
+
+ include "constants_topo.h"
+
+! use integer array to store values
+ integer, dimension(NX_BATHY,NY_BATHY) :: ibathy_topo
+
+ double precision xlat,xlon,value
+
+ integer iadd1,iel1
+ double precision samples_per_degree_topo
+ double precision xlo
+
+ xlo = xlon
+ if(xlon < 0.d0) xlo = xlo + 360.d0
+
+! compute number of samples per degree
+ samples_per_degree_topo = dble(RESOLUTION_TOPO_FILE) / 60.d0
+
+! compute offset in data file and avoid edge effects
+ iadd1 = 1 + int((90.d0-xlat)/samples_per_degree_topo)
+ if(iadd1 < 1) iadd1 = 1
+ if(iadd1 > NY_BATHY) iadd1 = NY_BATHY
+
+ iel1 = int(xlo/samples_per_degree_topo)
+ if(iel1 <= 0 .or. iel1 > NX_BATHY) iel1 = NX_BATHY
+
+! convert integer value to double precision
+ value = dble(ibathy_topo(iel1,iadd1))
+
+ end subroutine get_topo_bathy
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_palette_GMT_OpenDX.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_palette_GMT_OpenDX.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_palette_GMT_OpenDX.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,276 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 1
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! August 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+ program convert_palette
+
+! convert GMT palette for the globe found at
+! http://sview01.wiredworkplace.net/pub/cpt-city/gmt/tn/GMT_globe.png.index.html
+! to proprietary OpenDX *.cm format
+
+ implicit none
+
+ integer, parameter :: NUM_LINES = 38
+
+! opacity: 1=totally opaque 2=continents 80% opaque and oceans 30% opaque
+ integer, parameter :: OPACITY = 2
+
+ integer, dimension(NUM_LINES) :: r,g,b
+ real, dimension(NUM_LINES) :: z
+
+ integer :: i,icomp
+
+ real :: rval,gval,bval,hval,sval,vval
+
+! read the input GMT palette "GMT_globe_palette_cropped.dat" or "GMT_globe_palette.dat"
+ do i = 1,NUM_LINES
+ read(*,*) z(i),r(i),g(i),b(i)
+ enddo
+
+! for OpenDX *.cm format, output min and max of z
+ print *,minval(z)
+ print *,maxval(z)
+
+! output the palette converted from RGB to HSV
+
+! output H, then S, then V
+ do icomp = 1,3
+
+! for OpenDX *.cm format, output number of values
+ print *,NUM_LINES
+ do i = 1,NUM_LINES
+
+ rval = r(i) / 255.d0
+ gval = g(i) / 255.d0
+ bval = b(i) / 255.d0
+
+ call rgb_to_hsv ( rval, gval, bval, hval, sval, vval )
+
+! for OpenDX *.cm format, output value of H,S or V and then three zeroes
+! hue is an angle between 0 and 360 degrees but it is stored as a real value between 0 and 1
+ if(icomp == 1) print *,(z(i)-z(1))/(z(NUM_LINES)-z(1)),hval/360.,' 0 0 0'
+ if(icomp == 2) print *,(z(i)-z(1))/(z(NUM_LINES)-z(1)),sval,' 0 0 0'
+ if(icomp == 3) print *,(z(i)-z(1))/(z(NUM_LINES)-z(1)),vval,' 0 0 0'
+
+ enddo
+
+ enddo
+
+! output opacity, set to 1 (i.e. totally opaque)
+ if(OPACITY == 1) then
+ print *,'2'
+ print *,'0.00000000000000000000 1.00000000000000000000 0 0 0'
+ print *,'1.00000000000000000000 1.00000000000000000000 0 0 0'
+ else if(OPACITY == 2) then
+ print *,'4'
+ print *,'0.0000 0.00 0 0 0'
+ print *,'0.5934 0.00 0 0 0'
+ print *,'0.5934 0.44 0 0 0'
+ print *,'1.0000 0.44 0 0 0'
+ else
+ stop 'wrong opacity code'
+ endif
+
+ end program convert_palette
+
+!---- Fortran conversion from RGB to HSV below
+!---- taken from http://orion.math.iastate.edu/burkardt/f_src/colors/colors.f90
+
+subroutine rgb_to_hsv ( r, g, b, h, s, v )
+!
+!*******************************************************************************
+!
+!! RGB_TO_HSV converts RGB to HSV color coordinates.
+!
+!
+! Definition:
+!
+! The RGB color system describes a color based on the amounts of the
+! base colors red, green, and blue. Thus, a particular color
+! has three coordinates, (R,G,B). Each coordinate must be between
+! 0 and 1.
+!
+! The HSV color system describes a color based on the three qualities
+! of hue, saturation, and value. A given color will be represented
+! by three numbers, (H,S,V). H, the value of hue, is an angle
+! between 0 and 360 degrees, with 0 representing red. S is the
+! saturation, and is between 0 and 1. Finally, V is the "value",
+! a measure of brightness, which goes from 0 for black, increasing
+! to a maximum of 1 for the brightest colors. The HSV color system
+! is sometimes also called HSB, where the B stands for brightness.
+!
+! Reference:
+!
+! Foley, van Dam, Feiner, and Hughes,
+! Computer Graphics, Principles and Practice,
+! Addison Wesley, Second Edition, 1990.
+!
+! Modified:
+!
+! 29 August 1998
+!
+! Author:
+!
+! John Burkardt
+!
+! Parameters:
+!
+! Input, real R, G, B, the RGB color coordinates to be converted.
+!
+! Output, real H, S, V, the corresponding HSV color coordinates.
+
+ implicit none
+
+ real b
+ real bc
+ real g
+ real gc
+ real h
+ real r
+ real rc
+ real rgbmax
+ real rgbmin
+ real r_modp
+ real s
+ real v
+
+ rgbmax = max ( r, g, b )
+ rgbmin = min ( r, g, b )
+
+ v = rgbmax
+!
+! Compute the saturation.
+!
+ if ( rgbmax /= 0.0E+00 ) then
+ s = ( rgbmax - rgbmin ) / rgbmax
+ else
+ s = 0.0E+00
+ end if
+!
+! Compute the hue.
+!
+ if ( s == 0.0E+00 ) then
+
+ h = 0.0E+00
+
+ else
+
+ rc = ( rgbmax - r ) / ( rgbmax - rgbmin )
+ gc = ( rgbmax - g ) / ( rgbmax - rgbmin )
+ bc = ( rgbmax - b ) / ( rgbmax - rgbmin )
+
+ if ( r == rgbmax ) then
+ h = bc - gc
+ else if ( g == rgbmax ) then
+ h = 2.0E+00 + rc - bc
+ else
+ h = 4.0E+00 + gc - rc
+ end if
+
+ h = h * 60.0E+00
+!
+! Make sure H lies between 0 and 360.0E+00
+!
+ h = r_modp ( h, 360.0E+00 )
+
+ end if
+
+end
+
+!-------------------
+
+function r_modp ( x, y )
+!
+!*******************************************************************************
+!
+!! R_MODP returns the nonnegative remainder of real division.
+!
+!
+! Formula:
+!
+! If
+! REM = R_MODP ( X, Y )
+! RMULT = ( X - REM ) / Y
+! then
+! X = Y * RMULT + REM
+! where REM is always nonnegative.
+!
+! Comments:
+!
+! The MOD function computes a result with the same sign as the
+! quantity being divided. Thus, suppose you had an angle A,
+! and you wanted to ensure that it was between 0 and 360.
+! Then mod(A,360.0) would do, if A was positive, but if A
+! was negative, your result would be between -360 and 0.
+!
+! On the other hand, R_MODP(A,360.0) is between 0 and 360, always.
+!
+! Examples:
+!
+! I J MOD R_MODP R_MODP Factorization
+!
+! 107 50 7 7 107 = 2 * 50 + 7
+! 107 -50 7 7 107 = -2 * -50 + 7
+! -107 50 -7 43 -107 = -3 * 50 + 43
+! -107 -50 -7 43 -107 = 3 * -50 + 43
+!
+! Modified:
+!
+! 29 August 1998
+!
+! Author:
+!
+! John Burkardt
+!
+! Parameters:
+!
+! Input, real X, the number to be divided.
+!
+! Input, real Y, the number that divides X.
+!
+! Output, real R_MODP, the nonnegative remainder when X is divided by Y.
+!
+ implicit none
+
+ real r_modp
+ real x
+ real y
+
+ if ( y == 0 ) then
+ write ( *, '(a)' ) ' '
+ write ( *, '(a)' ) 'R_MODP - Fatal error!'
+ write ( *, '(a,g14.6)' ) ' R_MODP ( X, Y ) called with Y = ', y
+ stop
+ end if
+
+ r_modp = mod ( x, y )
+
+ if ( r_modp < 0.0E+00 ) then
+ r_modp = r_modp + abs ( y )
+ end if
+
+end
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_topo_bathy_to_OpenDX.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_topo_bathy_to_OpenDX.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/convert_topo_bathy_to_OpenDX.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,240 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 1
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! August 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+ program convert_topo_bathy_to_OpenDX
+!
+!--- read topography and bathymetry ASCII file, smooth it or not and convert it to OpenDX format
+!
+
+! this program uses a very simple window filter
+! it works fine because the model has a very high resolution
+! in principle it would be better to use a circular cap to take
+! the notion of angular distance between points into account in the filter
+! in practice though this simple filter works perfectly fine
+
+ implicit none
+
+ include "constants_topo.h"
+
+! subsample the OpenDX output file to reduce the total number of elements
+ integer, parameter :: NSUBSAMPLING = 4
+
+! filter final surface using box filter
+ logical, parameter :: SMOOTH_THE_MODEL = .true.
+ integer, parameter :: SIZE_FILTER_ONE_SIDE = 5
+
+! use integer array to store values
+ integer ibathy_topo(NX_BATHY,NY_BATHY)
+ integer ibathy_topo_ori(NX_BATHY,NY_BATHY)
+
+ integer ix,iy,minvalue,maxvalue,ibool_number1,ibool_number2,ix2
+ integer ix_current,iy_current,ix_min,ix_max,iy_min,iy_max,ix_value,iy_value
+
+ double precision value_sum,area_window
+ double precision :: long,lat,phi,theta,r,x,y,z
+
+!----
+
+! read the topography file
+ print *,'NX_BATHY,NY_BATHY = ',NX_BATHY,NY_BATHY
+ print *,'file used has a resolution of ',RESOLUTION_TOPO_FILE,' minutes'
+
+ print *
+ print *,'reading topo file'
+
+ open(unit=13,file='topo_bathy_etopo4_from_etopo2_subsampled.dat',status='old')
+ do iy=1,NY_BATHY
+ do ix=1,NX_BATHY
+ read(13,*) ibathy_topo_ori(ix,iy)
+ enddo
+ enddo
+ close(13)
+
+! compute min and max before smoothing
+ minvalue = minval(ibathy_topo_ori)
+ maxvalue = maxval(ibathy_topo_ori)
+ print *,'min and max of topography before smoothing = ',minvalue,maxvalue
+
+!----
+
+! smooth topography/bathymetry model
+ if(SMOOTH_THE_MODEL) then
+
+ print *
+ print *,'smoothing topo file'
+ if(SIZE_FILTER_ONE_SIDE < 1) stop 'SIZE_FILTER_ONE_SIDE must be greater than 1 for filter'
+ print *,'size of window filter is ',2*SIZE_FILTER_ONE_SIDE+1,' x ',2*SIZE_FILTER_ONE_SIDE+1
+ area_window = dble((2*SIZE_FILTER_ONE_SIDE+1)**2)
+
+ do iy_current = 1,NY_BATHY
+
+ if(mod(iy_current,10) == 0) print *,'smoothing line ',iy_current,' out of ',NY_BATHY
+
+ do ix_current = 1,NX_BATHY
+
+ value_sum = 0.d0
+
+! compute min and max of window
+ ix_min = ix_current - SIZE_FILTER_ONE_SIDE
+ ix_max = ix_current + SIZE_FILTER_ONE_SIDE
+
+ iy_min = iy_current - SIZE_FILTER_ONE_SIDE
+ iy_max = iy_current + SIZE_FILTER_ONE_SIDE
+
+! loop on points in window to compute sum
+ do iy = iy_min,iy_max
+ do ix = ix_min,ix_max
+
+! copy current value
+ ix_value = ix
+ iy_value = iy
+
+! avoid edge effects, use periodic boundary in Xmin and Xmax
+ if(ix_value < 1) ix_value = ix_value + NX_BATHY
+ if(ix_value > NX_BATHY) ix_value = ix_value - NX_BATHY
+
+! avoid edge effects, use rigid boundary in Ymin and Ymax
+! *not* periodic, because South and North poles must not be merged
+ if(iy_value < 1) iy_value = 1
+ if(iy_value > NY_BATHY) iy_value = NY_BATHY
+
+! compute sum
+ value_sum = value_sum + dble(ibathy_topo_ori(ix_value,iy_value))
+
+ enddo
+ enddo
+
+! assign mean value to filtered point
+ ibathy_topo(ix_current,iy_current) = nint(value_sum / area_window)
+
+ enddo
+ enddo
+
+ else
+
+! no smoothing
+ ibathy_topo = ibathy_topo_ori
+
+ endif
+
+!----
+
+! compute min and max after smoothing
+ minvalue = minval(ibathy_topo)
+ maxvalue = maxval(ibathy_topo)
+ print *,'min and max of topography after smoothing = ',minvalue,maxvalue
+
+! store file in OpenDX format with grey levels
+
+! create the OpenDX file
+ print *
+ print *,'creating OpenDX file'
+
+ print *,'subsampling OpenDX file by a factor of NSUBSAMPLING to reduce its number of elements'
+ print *,'NSUBSAMPLING = ',NSUBSAMPLING
+ if(mod(NX_BATHY,NSUBSAMPLING) /= 0 .or. mod(NY_BATHY,NSUBSAMPLING) /= 0) &
+ stop 'need NX_BATHY and NX_BATHY to be multiples of NSUBSAMPLING to be able to subsample'
+
+! creating the header
+ open(unit=11,file='earth_topo_bathy.dx',status='unknown')
+
+! write point coordinates
+ write(11,*) 'object 1 class array type float rank 1 shape 3 items ', &
+ (NX_BATHY/NSUBSAMPLING)*(NY_BATHY/NSUBSAMPLING),' data follows'
+ do iy = 1,NY_BATHY,NSUBSAMPLING
+ do ix = 1,NX_BATHY,NSUBSAMPLING
+ long = (ix-1)/dble(NX_BATHY-1) * 360.d0
+
+ lat = (dble(iy-1)/dble(NY_BATHY-1))*180.d0 - 90.d0
+! points are inverted in the data file, therefore invert latitude to restore the correct orientation
+ lat = - lat
+
+ phi = long * PI / 180.d0
+ theta = (90.d0 - lat) * PI / 180.d0
+
+! use an Earth model of mean radius equal to 1, and add elevation to each point, amplified in order to see it
+ r = (R_EARTH + EXAGGERATION_FACTOR_TOPO * ibathy_topo(ix,iy)) / R_EARTH
+
+ x = r*sin(theta)*cos(phi)
+ y = r*sin(theta)*sin(phi)
+ z = r*cos(theta)
+
+ write(11,*) sngl(x),sngl(y),sngl(z)
+ enddo
+ enddo
+
+! write elements
+ write(11,*) 'object 2 class array type int rank 1 shape 4 items ', &
+ (NX_BATHY/NSUBSAMPLING)*(NY_BATHY/NSUBSAMPLING-1),' data follows'
+
+ do iy = 1,NY_BATHY-NSUBSAMPLING,NSUBSAMPLING
+ do ix = 1,NX_BATHY-NSUBSAMPLING,NSUBSAMPLING
+! point order in OpenDX is 1,4,2,3 *not* 1,2,3,4 as in AVS
+ ibool_number1 = ((iy-1)/NSUBSAMPLING)*(NX_BATHY/NSUBSAMPLING) + (ix-1)/NSUBSAMPLING + 1
+! point numbers start at 0 in OpenDX, not 1 as in AVS
+ write(11,"(i10,1x,i10,1x,i10,1x,i10)") ibool_number1-1,ibool_number1+NX_BATHY/NSUBSAMPLING-1, &
+ ibool_number1+1-1,ibool_number1+NX_BATHY/NSUBSAMPLING+1-1
+ enddo
+ enddo
+
+! to close the topology of the sphere, implement periodic boundary conditions in longitude,
+! i.e., connect ix = NX_BATHY-NSUBSAMPLING with ix = 1
+! otherwise one can see an empty line that does not look nice in the OpenDX images
+ ix = NX_BATHY-NSUBSAMPLING
+ ix2 = 1
+ do iy = 1,NY_BATHY-NSUBSAMPLING,NSUBSAMPLING
+! point order in OpenDX is 1,4,2,3 *not* 1,2,3,4 as in AVS
+ ibool_number1 = ((iy-1)/NSUBSAMPLING)*(NX_BATHY/NSUBSAMPLING) + (ix-1)/NSUBSAMPLING + 1
+ ibool_number2 = ((iy-1)/NSUBSAMPLING)*(NX_BATHY/NSUBSAMPLING) + (ix2-1)/NSUBSAMPLING + 1
+! point numbers start at 0 in OpenDX, not 1 as in AVS
+ write(11,"(i10,1x,i10,1x,i10,1x,i10)") ibool_number1-1,ibool_number1+NX_BATHY/NSUBSAMPLING-1, &
+ ibool_number2-1,ibool_number2+NX_BATHY/NSUBSAMPLING-1
+ enddo
+
+ write(11,*) 'attribute "element type" string "quads"'
+ write(11,*) 'attribute "ref" string "positions"'
+ write(11,*) 'object 3 class array type float rank 0 items ',(NX_BATHY/NSUBSAMPLING)*(NY_BATHY/NSUBSAMPLING),' data follows'
+
+! write data values
+ do iy = 1,NY_BATHY,NSUBSAMPLING
+ do ix = 1,NX_BATHY,NSUBSAMPLING
+ write(11,*) ibathy_topo(ix,iy)
+ enddo
+ enddo
+
+! define OpenDX field
+ write(11,*) 'attribute "dep" string "positions"'
+ write(11,*) 'object "irregular positions irregular connections" class field'
+ write(11,*) 'component "positions" value 1'
+ write(11,*) 'component "connections" value 2'
+ write(11,*) 'component "data" value 3'
+ write(11,*) 'end'
+
+ close(11)
+
+ end program convert_topo_bathy_to_OpenDX
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_continent_boundaries_AVS.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_continent_boundaries_AVS.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_continent_boundaries_AVS.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,133 @@
+#!/usr/bin/perl
+
+#
+# Script to create plate and continent boundaries in AVS format
+#
+# Author : Dimitri Komatitsch, Caltech, August 2000
+#
+
+#
+# first file contains continent boundaries with longitude and then latitude
+#
+
+# file with continents
+ $name = 'continent_boundaries_gmt.dat';
+
+ print STDOUT "Getting boundaries from file $name ...\n";
+
+ open(FILEAVS,">AVS_continent_boundaries.inp");
+
+ $numsegments = `cat $name | grep ">" | wc -l `;
+ chop $numsegments;
+ print STDOUT "There are $numsegments contours\n";
+
+ $numpoints = `cat $name | grep -v ">" | wc -l `;
+ chop $numpoints;
+ print STDOUT "There are $numpoints data points\n";
+
+# read the GMT file to get the number of individual line segments
+ $currentelem = 0;
+ $previous_was_comment = 1;
+ open(FILEGMT,"<$name");
+ while($line = <FILEGMT>) {
+ chop $line;
+# get line marker (comment in file)
+ if(substr($line,0,1) eq '>') {
+ $previous_was_comment = 1;
+ }
+ else {
+ if($previous_was_comment == 0) {
+ $currentelem ++;
+ }
+ $previous_was_comment = 0;
+ }
+ }
+ close(FILEGMT);
+ $num_individual_lines = $currentelem;
+ print STDOUT "There are $num_individual_lines individual line segments\n";
+
+ $pi = 3.14159265 ;
+
+# write header for AVS (with point data)
+ print FILEAVS "$numpoints $num_individual_lines 1 0 0\n";
+
+# read the GMT file to get the points
+ $currentpoint = 0;
+ open(FILEGMT,"<$name");
+ while($line = <FILEGMT>) {
+ chop $line;
+# get point only if line is not a comment
+ if(substr($line,0,1) ne '>') {
+ $currentpoint ++;
+
+# longitude is the number before the white space
+ $longitude = substr($line,0,index($line," "));
+
+# latitude is the number after the white space
+ $latitude = substr($line,index($line," ")+1);
+
+# convert geographic latitude to geocentric colatitude and convert to radians
+ $theta = $pi/2. - atan2(0.99329534 * tan($latitude * $pi / 180.),1) ;
+ $phi = $longitude * $pi / 180. ;
+
+# compute the Cartesian position of the receiver (ignore ellipticity for AVS)
+# assume a sphere of radius one
+ $r_target = 1. ;
+## DK DK make the radius a little bit bigger to make sure it is
+## DK DK correctly superimposed to the mesh in final AVS figure
+ $r_target = 1.015 ;
+ $x_target = $r_target*sin($theta)*cos($phi) ;
+ $y_target = $r_target*sin($theta)*sin($phi) ;
+ $z_target = $r_target*cos($theta) ;
+
+ print FILEAVS "$currentpoint $x_target $y_target $z_target\n";
+
+ }
+ }
+ close(FILEGMT);
+
+# read the GMT file to get the lines
+ $currentline = 0;
+ $currentelem = 0;
+ $currentpoint = 0;
+ $previous_was_comment = 1;
+ open(FILEGMT,"<$name");
+ while($line = <FILEGMT>) {
+ chop $line;
+# get line marker (comment in file)
+ if(substr($line,0,1) eq '>') {
+ $currentline ++;
+ $currentpoint ++;
+ $previous_was_comment = 1;
+ print STDOUT "processing contour $currentline named $line\n";
+ }
+ else {
+ if($previous_was_comment == 0) {
+ $previouspoint = $currentpoint;
+ $currentelem ++;
+ $currentpoint ++;
+ print FILEAVS "$currentelem $currentline line $previouspoint $currentpoint\n";
+ }
+ $previous_was_comment = 0;
+ }
+ }
+ close(FILEGMT);
+
+ print FILEAVS " 1 1\n";
+ print FILEAVS " Zcoord, meters\n";
+
+# create data values for the points
+ $currentpoint = 1;
+ while($currentpoint <= $numpoints) {
+ print FILEAVS "$currentpoint 255.\n";
+ $currentpoint ++ ;
+ }
+
+ close(FILEAVS);
+
+
+##
+## DK DK define tangent function which is not standard in Perl
+##
+ sub tan { sin($_[0]) / cos($_[0]) }
+
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_continent_boundaries_AVS.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_continent_boundaries_DX.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_continent_boundaries_DX.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_continent_boundaries_DX.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,145 @@
+#!/usr/bin/perl
+
+#
+# Script to create plate and continent boundaries in OpenDX format
+#
+# Author : Dimitri Komatitsch, Caltech, August 2000
+#
+
+#
+# first file contains continent boundaries with longitude and then latitude
+#
+
+# file with continents
+ $name = 'continent_boundaries_gmt.dat';
+
+ print STDOUT "Getting boundaries from file $name ...\n";
+
+ open(FILEAVS,">DX_continent_boundaries.dx");
+
+ $numsegments = `cat $name | grep ">" | wc -l `;
+ chop $numsegments;
+ print STDOUT "There are $numsegments contours\n";
+
+ $numpoints = `cat $name | grep -v ">" | wc -l `;
+ chop $numpoints;
+ print STDOUT "There are $numpoints data points\n";
+
+# read the GMT file to get the number of individual line segments
+ $currentelem = 0;
+ $previous_was_comment = 1;
+ open(FILEGMT,"<$name");
+ while($line = <FILEGMT>) {
+ chop $line;
+# get line marker (comment in file)
+ if(substr($line,0,1) eq '>') {
+ $previous_was_comment = 1;
+ }
+ else {
+ if($previous_was_comment == 0) {
+ $currentelem ++;
+ }
+ $previous_was_comment = 0;
+ }
+ }
+ close(FILEGMT);
+ $num_individual_lines = $currentelem;
+ print STDOUT "There are $num_individual_lines individual line segments\n";
+
+ $pi = 3.1415926535 ;
+
+# write header for AVS (with point data)
+ print FILEAVS "object 1 class array type float rank 1 shape 3 items $numpoints data follows\n";
+
+# read the GMT file to get the points
+ $currentpoint = 0;
+ open(FILEGMT,"<$name");
+ while($line = <FILEGMT>) {
+ chop $line;
+# get point only if line is not a comment
+ if(substr($line,0,1) ne '>') {
+ $currentpoint ++;
+
+# longitude is the number before the white space
+ $longitude = substr($line,0,index($line," "));
+
+# latitude is the number after the white space
+ $latitude = substr($line,index($line," ")+1);
+
+# convert geographic latitude to geocentric colatitude and convert to radians
+# $theta = $pi/2. - atan2(0.99329534 * tan($latitude * $pi / 180.),1) ;
+ $theta = $pi/2. - $latitude * $pi / 180. ;
+ $phi = $longitude * $pi / 180. ;
+
+# compute the Cartesian position of the receiver (ignore ellipticity)
+# assume a sphere of radius one
+## DK DK make the radius a little bit bigger to make sure it is
+## DK DK correctly superimposed to the mesh in final AVS or OpenDX figure
+# $r_target = 1.015 ;
+ $r_target = 1.007 ;
+ $x_target = $r_target*sin($theta)*cos($phi) ;
+ $y_target = $r_target*sin($theta)*sin($phi) ;
+ $z_target = $r_target*cos($theta) ;
+
+ print FILEAVS "$x_target $y_target $z_target\n";
+
+ }
+ }
+ close(FILEGMT);
+
+ print FILEAVS "object 2 class array type int rank 1 shape 2 items $num_individual_lines data follows\n";
+
+# read the GMT file to get the lines
+ $currentline = 0;
+ $currentelem = 0;
+ $currentpoint = 0;
+ $previous_was_comment = 1;
+ open(FILEGMT,"<$name");
+ while($line = <FILEGMT>) {
+ chop $line;
+# get line marker (comment in file)
+ if(substr($line,0,1) eq '>') {
+ $currentline ++;
+ $currentpoint ++;
+ $previous_was_comment = 1;
+ print STDOUT "processing contour $currentline named $line\n";
+ }
+ else {
+ if($previous_was_comment == 0) {
+ $previouspoint = $currentpoint;
+ $currentelem ++;
+ $currentpoint ++;
+ $previouspointdx = $previouspoint - 1;
+ $currentpointdx = $currentpoint - 1;
+ print FILEAVS "$previouspointdx $currentpointdx\n";
+ }
+ $previous_was_comment = 0;
+ }
+ }
+ close(FILEGMT);
+
+ print FILEAVS "attribute \"element type\" string \"lines\"\n";
+ print FILEAVS "attribute \"ref\" string \"positions\"\n";
+ print FILEAVS "object 3 class array type float rank 0 items $numpoints data follows\n";
+
+# create data values for the points
+ $currentpoint = 1;
+ while($currentpoint <= $numpoints) {
+ print FILEAVS "255.\n";
+ $currentpoint ++ ;
+ }
+
+ print FILEAVS "attribute \"dep\" string \"positions\"\n";
+ print FILEAVS "object \"irregular connections irregular positions\" class field\n";
+ print FILEAVS "component \"positions\" value 1\n";
+ print FILEAVS "component \"connections\" value 2\n";
+ print FILEAVS "component \"data\" value 3\n";
+ print FILEAVS "end\n";
+
+ close(FILEAVS);
+
+##
+## DK DK define tangent function which is not standard in Perl
+##
+ sub tan { sin($_[0]) / cos($_[0]) }
+
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_continent_boundaries_DX.pl
___________________________________________________________________
Name: svn:executable
+ *
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_mpeg_OpenDX_sequences.csh
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_mpeg_OpenDX_sequences.csh (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_mpeg_OpenDX_sequences.csh 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,15 @@
+#!/bin/csh
+
+# create the four MPEG movie sequences from all the OpenDX *.tif files with logos added separately
+
+#set quality = 100
+set quality = 85
+
+ convert -quality $quality te*.tif movie_transparent_europe.mpeg
+
+ convert -quality $quality tp*.tif movie_transparent_pacific.mpeg
+
+ convert -quality $quality oe*.tif movie_opaque_europe.mpeg
+
+ convert -quality $quality op*.tif movie_opaque_pacific.mpeg
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_mpeg_title_sequences.csh
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_mpeg_title_sequences.csh (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/create_mpeg_title_sequences.csh 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,656 @@
+#!/bin/csh
+
+# create the three MPEG title sequences from all the *.tif files with titles
+
+# use each file 125 times in order to have a sequence that lasts 5 seconds (at 25 images per second)
+
+#set quality = 100
+set quality = 85
+
+#################################################################
+########## first title
+#################################################################
+
+ convert -quality $quality \
+titre_general_01.tiff \
+titre_general_01.tiff \
+titre_general_01.tiff \
+titre_general_01.tiff \
+titre_general_01.tiff \
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+titre_propagation_Europe.tiff \
+titre_propagation_Europe.tiff \
+titre_propagation_Europe.tiff \
+title_01.mpeg
+
+
+#################################################################
+########## second title
+#################################################################
+
+ convert -quality $quality \
+titre_semi_transparence.tiff \
+titre_semi_transparence.tiff \
+titre_semi_transparence.tiff \
+titre_semi_transparence.tiff \
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+titre_semi_transparence.tiff \
+titre_semi_transparence.tiff \
+titre_semi_transparence.tiff \
+title_02.mpeg
+
+#################################################################
+########## third title
+#################################################################
+
+ convert -quality $quality \
+titre_propagation_Pacifique.tiff \
+titre_propagation_Pacifique.tiff \
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/debug_val_proc_0.dx
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/debug_val_proc_0.dx (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/debug_val_proc_0.dx 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,1198 @@
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/earth_main_cities.dx
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/earth_main_cities.dx (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/earth_main_cities.dx 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,476 @@
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+ end
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/earth_topo_bathy.dx.bz2
===================================================================
(Binary files differ)
Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/earth_topo_bathy.dx.bz2
___________________________________________________________________
Name: svn:mime-type
+ application/octet-stream
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/epicenter.dx
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/epicenter.dx (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/epicenter.dx 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,14 @@
+ object 1 class array type float rank 1 shape 3 items 1 data follows
+ -0.2131408 0.8485492 0.5348852
+ object 2 class array type int rank 1 shape 2 items 1 data follows
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+ attribute "element type" string "lines"
+ attribute "ref" string "positions"
+ object 3 class array type float rank 0 items 1 data follows
+ 2
+ attribute "dep" string "positions"
+ object "irregular positions irregular connections" class field
+ component "positions" value 1
+ component "connections" value 2
+ component "data" value 3
+ end
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/frame_rate_MPEG.txt
===================================================================
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/frame_rates_MPEG_movies.txt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/frame_rates_MPEG_movies.txt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/frame_rates_MPEG_movies.txt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,27 @@
+
+https://www.fzd.de/FKTI/MITARB/schmei/doc/Video/mpeg2enc.html
+
+ /* frame_rate_code */
+
+ Defines the frame rate (for interlaced sequences: field rate is twice
+ the frame rate). Legal values are:
+
+ Code Frames/sec Meaning
+ ---- ---------- -----------------------------------------------
+ 1 24000/1001 23.976 fps -- NTSC encapsulated film rate
+ 2 24 Standard international cinema film rate
+ 3 25 PAL (625/50) video frame rate !!!! DK DK this is the default when called from ImageMagick
+ 4 30000/1001 29.97 -- NTSC video frame rate
+ 5 30 NTSC drop-frame (525/60) video frame rate
+ 6 50 double frame rate/progressive PAL
+ 7 60000/1001 double frame rate NTSC
+ 8 60 double frame rate drop-frame NTSC
+
+ /* bit_rate */
+
+ A positive floating point value specifying the target bitrate.
+ In units of bits/sec.
+
+
+
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/lat_long_main_cities_processed.dat
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/lat_long_main_cities_processed.dat (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/lat_long_main_cities_processed.dat 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,232 @@
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Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/longlatdepth2xyz.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/longlatdepth2xyz.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/longlatdepth2xyz.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,81 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 1
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! August 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+!----
+!---- converts lat long depth to x y z
+!----
+
+ program convert
+
+ implicit none
+
+! R_EARTH is the radius of the 1-D Earth
+ double precision, parameter :: R_EARTH = 6371000.d0
+
+! some useful constants
+ double precision, parameter :: PI = 3.141592653589793d0
+
+ double precision theta,phi,latitude,longitude,depth,r0
+ double precision x_target,y_target,z_target,r_target
+
+! **************
+
+! latitude and longitude in degrees
+! depth of hypocenter in kilometers
+ latitude = -16.0800
+ longitude = 168.3100
+ depth = 15.0000
+
+! convert geographic latitude latitude (degrees)
+! to geocentric colatitude theta (radians)
+ theta=PI/2.0d0-atan(0.99329534d0*dtan(latitude*PI/180.0d0))
+ phi=longitude*PI/180.0d0
+
+! normalized Earth radius
+ r0 = 1.d0
+
+! compute the Cartesian position of the source
+ r_target = r0 - depth*1000.0d0/R_EARTH
+ x_target = r_target*dsin(theta)*dcos(phi)
+ y_target = r_target*dsin(theta)*dsin(phi)
+ z_target = r_target*dcos(theta)
+
+! print result
+ print *
+ print *,'long = ',longitude
+ print *,'lat = ',latitude
+ print *,'depth (km) = ',depth
+ print *
+ print *,'x = ',x_target
+ print *,'y = ',y_target
+ print *,'z = ',z_target
+ print *
+ print *,'radius = ',sqrt(x_target**2 + y_target**2 + z_target**2)
+ print *
+
+ end program convert
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/min_max_topo_palette.txt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/min_max_topo_palette.txt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/min_max_topo_palette.txt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,4 @@
+
+Max in topo file (to enforce in color palette): +5606
+Min in topo file (to enforce in color palette): -8180
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_basic.cfg
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_basic.cfg (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_basic.cfg 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,36 @@
+//
+// time: Tue Oct 7 22:18:59 2008
+//
+// version: 3.2.0 (format), 4.4.4 (DX)
+//
+//
+// node Sequencer[1]:
+// vcr[1]: min = 1, max = 50, beg = 1, end = 50, cur = 1, inc = 1, loop = off, step = off, pal = off
+// window: position = (0.0052,0.0250), size = 0.1458x0.0667, screen = 0
+// startup = 1
+//
+// node Image[2]:
+// depth: value = 24
+// window: position = (0.5740,0.1533), size = 0.4229x0.5900, screen = 0
+// input[1]: defaulting = 0, value = "Image_2"
+// input[4]: defaulting = 0, value = 1
+// input[5]: defaulting = 0, value = [-1242.9 147.285 -57.7637]
+// input[6]: defaulting = 0, value = [1643.88 -31801.8 80621.4]
+// input[7]: defaulting = 0, value = 46528.4
+// input[8]: defaulting = 0, value = 798
+// input[9]: defaulting = 0, value = 0.836
+// input[10]: defaulting = 0, value = [0.0132238 0.929834 0.367742]
+// input[11]: defaulting = 1, value = 30.0001
+// input[12]: defaulting = 0, value = 0
+// input[14]: defaulting = 0, value = 1
+// input[15]: defaulting = 1, value = "none"
+// input[16]: defaulting = 1, value = "none"
+// input[17]: defaulting = 1, value = 1
+// input[18]: defaulting = 1, value = 1
+// input[19]: defaulting = 0, value = 0
+// input[22]: defaulting = 0, value = "black"
+// input[25]: defaulting = 0, value = "/home/komatits/imagedx-1073744456"
+// input[26]: defaulting = 0, value = "tiff"
+// input[29]: defaulting = 1, value = 0
+// input[41]: defaulting = 0, value = "rotate"
+// internal caching: 1
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_basic.net
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_basic.net (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_basic.net 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,612 @@
+//
+// time: Tue Oct 7 22:18:59 2008
+//
+// version: 3.2.0 (format), 4.4.4 (DX)
+//
+//
+// MODULE main
+// workspace: width = 605, height = 633
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+macro main(
+) -> (
+) {
+ //
+ // node AmbientLight[1]: x = 361, y = 354, inputs = 1, label = AmbientLight
+ //
+main_AmbientLight_1_out_1 =
+ AmbientLight(
+ main_AmbientLight_1_in_1
+ ) [instance: 1, cache: 1];
+ //
+ // node Sequencer[1]: x = 144, y = 12, inputs = 7, label = Sequencer
+ // input[1]: defaulting = 0, visible = 0, type = 32, value = "Sequencer_1"
+ // input[4]: defaulting = 1, visible = 1, type = 1, value = 1
+ // input[5]: defaulting = 1, visible = 1, type = 1, value = 50
+ // input[6]: defaulting = 1, visible = 0, type = 1, value = 1
+ // input[7]: defaulting = 0, visible = 0, type = 16777217, value = { 1 50 1 1 50 1 }
+ // vcr[1]: min = 1, max = 50, beg = 1, end = 50, cur = 1, inc = 1, loop = off, step = off, pal = off
+ // window: position = (0.0052,0.0250), size = 0.1458x0.0667, screen = 0
+ //
+ main_Sequencer_1_out_1 = @frame;
+ //
+ // node Format[1]: x = 108, y = 118, inputs = 3, label = Format
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "DX_movie_000%3.3d.dx"
+ //
+main_Format_1_out_1 =
+ Format(
+ main_Format_1_in_1,
+ main_Sequencer_1_out_1,
+ main_Format_1_in_3
+ ) [instance: 1, cache: 1];
+ //
+ // node Import[2]: x = 97, y = 199, inputs = 6, label = Import
+ // input[1]: defaulting = 1, visible = 1, type = 32, value = "DX_movie_006600.dx"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "dx"
+ //
+main_Import_2_out_1 =
+ Import(
+ main_Format_1_out_1,
+ main_Import_2_in_2,
+ main_Import_2_in_3,
+ main_Import_2_in_4,
+ main_Import_2_in_5,
+ main_Import_2_in_6
+ ) [instance: 2, cache: 1];
+ //
+ // node AutoColor[1]: x = 38, y = 333, inputs = 10, label = AutoColor
+ //
+main_AutoColor_1_out_1,
+main_AutoColor_1_out_2 =
+ AutoColor(
+ main_Import_2_out_1,
+ main_AutoColor_1_in_2,
+ main_AutoColor_1_in_3,
+ main_AutoColor_1_in_4,
+ main_AutoColor_1_in_5,
+ main_AutoColor_1_in_6,
+ main_AutoColor_1_in_7,
+ main_AutoColor_1_in_8,
+ main_AutoColor_1_in_9,
+ main_AutoColor_1_in_10
+ ) [instance: 1, cache: 1];
+ //
+ // node ShowConnections[1]: x = 167, y = 331, inputs = 1, label = ShowConnections
+ //
+main_ShowConnections_1_out_1 =
+ ShowConnections(
+ main_Import_2_out_1
+ ) [instance: 1, cache: 1];
+ //
+ // node Collect[1]: x = 141, y = 482, inputs = 4, label = Collect
+ //
+main_Collect_1_out_1 =
+ Collect(
+ main_AutoColor_1_out_1,
+ main_ShowConnections_1_out_1,
+ main_AmbientLight_1_out_1,
+ main_Collect_1_in_4
+ ) [instance: 1, cache: 1];
+ //
+ // node Format[2]: x = 533, y = 464, inputs = 3, label = Format
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "imagemovie%3.3d"
+ //
+main_Format_2_out_1 =
+ Format(
+ main_Format_2_in_1,
+ main_Sequencer_1_out_1,
+ main_Format_2_in_3
+ ) [instance: 2, cache: 1];
+ //
+ // node Image[2]: x = 211, y = 557, inputs = 49, label = Image
+ // input[1]: defaulting = 0, visible = 0, type = 67108863, value = "Image_2"
+ // input[4]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[5]: defaulting = 0, visible = 0, type = 8, value = [-1242.9 147.285 -57.7637]
+ // input[6]: defaulting = 0, visible = 0, type = 8, value = [1643.88 -31801.8 80621.4]
+ // input[7]: defaulting = 0, visible = 0, type = 5, value = 46528.4
+ // input[8]: defaulting = 0, visible = 0, type = 1, value = 798
+ // input[9]: defaulting = 0, visible = 0, type = 5, value = 0.836
+ // input[10]: defaulting = 0, visible = 0, type = 8, value = [0.0132238 0.929834 0.367742]
+ // input[11]: defaulting = 1, visible = 0, type = 5, value = 30.0001
+ // input[12]: defaulting = 0, visible = 0, type = 1, value = 0
+ // input[14]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[15]: defaulting = 1, visible = 0, type = 32, value = "none"
+ // input[16]: defaulting = 1, visible = 0, type = 32, value = "none"
+ // input[17]: defaulting = 1, visible = 0, type = 1, value = 1
+ // input[18]: defaulting = 1, visible = 0, type = 1, value = 1
+ // input[19]: defaulting = 0, visible = 0, type = 1, value = 0
+ // input[22]: defaulting = 0, visible = 0, type = 32, value = "black"
+ // input[25]: defaulting = 0, visible = 0, type = 32, value = "/home/komatits/imagedx-1073744456"
+ // input[26]: defaulting = 0, visible = 0, type = 32, value = "tiff"
+ // input[29]: defaulting = 1, visible = 0, type = 3, value = 0
+ // input[41]: defaulting = 0, visible = 0, type = 32, value = "rotate"
+ // depth: value = 24
+ // window: position = (0.5740,0.1533), size = 0.4229x0.5900, screen = 0
+ // internal caching: 1
+ //
+main_Image_2_out_1,
+main_Image_2_out_2,
+main_Image_2_out_3 =
+ Image(
+ main_Image_2_in_1,
+ main_Collect_1_out_1,
+ main_Image_2_in_3,
+ main_Image_2_in_4,
+ main_Image_2_in_5,
+ main_Image_2_in_6,
+ main_Image_2_in_7,
+ main_Image_2_in_8,
+ main_Image_2_in_9,
+ main_Image_2_in_10,
+ main_Image_2_in_11,
+ main_Image_2_in_12,
+ main_Image_2_in_13,
+ main_Image_2_in_14,
+ main_Image_2_in_15,
+ main_Image_2_in_16,
+ main_Image_2_in_17,
+ main_Image_2_in_18,
+ main_Image_2_in_19,
+ main_Image_2_in_20,
+ main_Image_2_in_21,
+ main_Image_2_in_22,
+ main_Image_2_in_23,
+ main_Image_2_in_24,
+ main_Image_2_in_25,
+ main_Image_2_in_26,
+ main_Image_2_in_27,
+ main_Image_2_in_28,
+ main_Image_2_in_29,
+ main_Image_2_in_30,
+ main_Image_2_in_31,
+ main_Image_2_in_32,
+ main_Image_2_in_33,
+ main_Image_2_in_34,
+ main_Image_2_in_35,
+ main_Image_2_in_36,
+ main_Image_2_in_37,
+ main_Image_2_in_38,
+ main_Image_2_in_39,
+ main_Image_2_in_40,
+ main_Image_2_in_41,
+ main_Image_2_in_42,
+ main_Image_2_in_43,
+ main_Image_2_in_44,
+ main_Image_2_in_45,
+ main_Image_2_in_46,
+ main_Image_2_in_47,
+ main_Image_2_in_48,
+ main_Image_2_in_49
+ ) [instance: 2, cache: 1];
+ //
+ // node Render[1]: x = 351, y = 536, inputs = 3, label = Render
+ //
+main_Render_1_out_1 =
+ Render(
+ main_Collect_1_out_1,
+ main_Image_2_out_2,
+ main_Render_1_in_3
+ ) [instance: 1, cache: 1];
+ //
+ // node WriteImage[1]: x = 491, y = 571, inputs = 4, label = WriteImage
+ // input[2]: defaulting = 0, visible = 1, type = 32, value = "movie_asteroide.miff"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "miff"
+ //
+ WriteImage(
+ main_Render_1_out_1,
+ main_WriteImage_1_in_2,
+ main_WriteImage_1_in_3,
+ main_WriteImage_1_in_4
+ ) [instance: 1, cache: 1];
+// network: end of macro body
+CacheScene(main_Image_2_in_1, main_Image_2_out_1, main_Image_2_out_2);
+}
+main_AmbientLight_1_in_1 = NULL;
+main_AmbientLight_1_out_1 = NULL;
+main_Sequencer_1_in_1 = "Sequencer_1";
+main_Sequencer_1_in_2 = NULL;
+main_Sequencer_1_in_3 = NULL;
+main_Sequencer_1_in_4 = NULL;
+main_Sequencer_1_in_5 = NULL;
+main_Sequencer_1_in_6 = NULL;
+main_Sequencer_1_in_7 = { 1 50 1 1 50 1 };
+main_Sequencer_1_out_1 = NULL;
+
+ at startframe = 1;
+ at nextframe = @startframe;
+ at endframe = 50;
+ at deltaframe = 1;
+main_Format_1_in_1 = "DX_movie_000%3.3d.dx";
+main_Format_1_in_3 = NULL;
+main_Format_1_out_1 = NULL;
+main_Import_2_in_2 = NULL;
+main_Import_2_in_3 = "dx";
+main_Import_2_in_4 = NULL;
+main_Import_2_in_5 = NULL;
+main_Import_2_in_6 = NULL;
+main_Import_2_out_1 = NULL;
+main_AutoColor_1_in_2 = NULL;
+main_AutoColor_1_in_3 = NULL;
+main_AutoColor_1_in_4 = NULL;
+main_AutoColor_1_in_5 = NULL;
+main_AutoColor_1_in_6 = NULL;
+main_AutoColor_1_in_7 = NULL;
+main_AutoColor_1_in_8 = NULL;
+main_AutoColor_1_in_9 = NULL;
+main_AutoColor_1_in_10 = NULL;
+main_AutoColor_1_out_1 = NULL;
+main_ShowConnections_1_out_1 = NULL;
+main_Collect_1_in_4 = NULL;
+main_Collect_1_out_1 = NULL;
+main_Format_2_in_1 = "imagemovie%3.3d";
+main_Format_2_in_3 = NULL;
+macro Image(
+ id,
+ object,
+ where,
+ useVector,
+ to,
+ from,
+ width,
+ resolution,
+ aspect,
+ up,
+ viewAngle,
+ perspective,
+ options,
+ buttonState = 1,
+ buttonUpApprox = "none",
+ buttonDownApprox = "none",
+ buttonUpDensity = 1,
+ buttonDownDensity = 1,
+ renderMode = 0,
+ defaultCamera,
+ reset,
+ backgroundColor,
+ throttle,
+ RECenable = 0,
+ RECfile,
+ RECformat,
+ RECresolution,
+ RECaspect,
+ AAenable = 0,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ interactionMode,
+ title,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels,
+ webOptions) -> (
+ object,
+ camera,
+ where)
+{
+ ImageMessage(
+ id,
+ backgroundColor,
+ throttle,
+ RECenable,
+ RECfile,
+ RECformat,
+ RECresolution,
+ RECaspect,
+ AAenable,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels,
+ interactionMode,
+ title,
+ renderMode,
+ buttonUpApprox,
+ buttonDownApprox,
+ buttonUpDensity,
+ buttonDownDensity) [instance: 1, cache: 1];
+ autoCamera =
+ AutoCamera(
+ object,
+ "front",
+ object,
+ resolution,
+ aspect,
+ [0,1,0],
+ perspective,
+ viewAngle,
+ backgroundColor) [instance: 1, cache: 1];
+ realCamera =
+ Camera(
+ to,
+ from,
+ width,
+ resolution,
+ aspect,
+ up,
+ perspective,
+ viewAngle,
+ backgroundColor) [instance: 1, cache: 1];
+ coloredDefaultCamera =
+ UpdateCamera(defaultCamera,
+ background=backgroundColor) [instance: 1, cache: 1];
+ nullDefaultCamera =
+ Inquire(defaultCamera,
+ "is null + 1") [instance: 1, cache: 1];
+ resetCamera =
+ Switch(
+ nullDefaultCamera,
+ coloredDefaultCamera,
+ autoCamera) [instance: 1, cache: 1];
+ resetNull =
+ Inquire(
+ reset,
+ "is null + 1") [instance: 2, cache: 1];
+ reset =
+ Switch(
+ resetNull,
+ reset,
+ 0) [instance: 2, cache: 1];
+ whichCamera =
+ Compute(
+ "($0 != 0 || $1 == 0) ? 1 : 2",
+ reset,
+ useVector) [instance: 1, cache: 1];
+ camera = Switch(
+ whichCamera,
+ resetCamera,
+ realCamera) [instance: 3, cache: 1];
+ AAobject =
+ AutoAxes(
+ object,
+ camera,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels) [instance: 1, cache: 1];
+ switchAAenable = Compute("$0+1",
+ AAenable) [instance: 2, cache: 1];
+ object = Switch(
+ switchAAenable,
+ object,
+ AAobject) [instance:4, cache: 1];
+ SWapproximation_options =
+ Switch(
+ buttonState,
+ buttonUpApprox,
+ buttonDownApprox) [instance: 5, cache: 1];
+ SWdensity_options =
+ Switch(
+ buttonState,
+ buttonUpDensity,
+ buttonDownDensity) [instance: 6, cache: 1];
+ HWapproximation_options =
+ Format(
+ "%s,%s",
+ buttonDownApprox,
+ buttonUpApprox) [instance: 1, cache: 1];
+ HWdensity_options =
+ Format(
+ "%d,%d",
+ buttonDownDensity,
+ buttonUpDensity) [instance: 2, cache: 1];
+ switchRenderMode = Compute(
+ "$0+1",
+ renderMode) [instance: 3, cache: 1];
+ approximation_options = Switch(
+ switchRenderMode,
+ SWapproximation_options,
+ HWapproximation_options) [instance: 7, cache: 1];
+ density_options = Switch(
+ switchRenderMode,
+ SWdensity_options,
+ HWdensity_options) [instance: 8, cache: 1];
+ renderModeString = Switch(
+ switchRenderMode,
+ "software",
+ "hardware")[instance: 9, cache: 1];
+ object_tag = Inquire(
+ object,
+ "object tag")[instance: 3, cache: 1];
+ annoted_object =
+ Options(
+ object,
+ "send boxes",
+ 0,
+ "cache",
+ 1,
+ "object tag",
+ object_tag,
+ "ddcamera",
+ whichCamera,
+ "rendering approximation",
+ approximation_options,
+ "render every",
+ density_options,
+ "button state",
+ buttonState,
+ "rendering mode",
+ renderModeString) [instance: 1, cache: 1];
+ RECresNull =
+ Inquire(
+ RECresolution,
+ "is null + 1") [instance: 4, cache: 1];
+ ImageResolution =
+ Inquire(
+ camera,
+ "camera resolution") [instance: 5, cache: 1];
+ RECresolution =
+ Switch(
+ RECresNull,
+ RECresolution,
+ ImageResolution) [instance: 10, cache: 1];
+ RECaspectNull =
+ Inquire(
+ RECaspect,
+ "is null + 1") [instance: 6, cache: 1];
+ ImageAspect =
+ Inquire(
+ camera,
+ "camera aspect") [instance: 7, cache: 1];
+ RECaspect =
+ Switch(
+ RECaspectNull,
+ RECaspect,
+ ImageAspect) [instance: 11, cache: 1];
+ switchRECenable = Compute(
+ "$0 == 0 ? 1 : (($2 == $3) && ($4 == $5)) ? ($1 == 1 ? 2 : 3) : 4",
+ RECenable,
+ switchRenderMode,
+ RECresolution,
+ ImageResolution,
+ RECaspect,
+ ImageAspect) [instance: 4, cache: 1];
+ NoRECobject, RECNoRerenderObject, RECNoRerHW, RECRerenderObject = Route(switchRECenable, annoted_object);
+ Display(
+ NoRECobject,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 1];
+ image =
+ Render(
+ RECNoRerenderObject,
+ camera) [instance: 1, cache: 1];
+ Display(
+ image,
+ NULL,
+ where,
+ throttle) [instance: 2, cache: 1];
+ WriteImage(
+ image,
+ RECfile,
+ RECformat) [instance: 1, cache: 1];
+ rec_where = Display(
+ RECNoRerHW,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 0];
+ rec_image = ReadImageWindow(
+ rec_where) [instance: 1, cache: 1];
+ WriteImage(
+ rec_image,
+ RECfile,
+ RECformat) [instance: 1, cache: 1];
+ RECupdateCamera =
+ UpdateCamera(
+ camera,
+ resolution=RECresolution,
+ aspect=RECaspect) [instance: 2, cache: 1];
+ Display(
+ RECRerenderObject,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 1];
+ RECRerenderObject =
+ ScaleScreen(
+ RECRerenderObject,
+ NULL,
+ RECresolution,
+ camera) [instance: 1, cache: 1];
+ image =
+ Render(
+ RECRerenderObject,
+ RECupdateCamera) [instance: 2, cache: 1];
+ WriteImage(
+ image,
+ RECfile,
+ RECformat) [instance: 2, cache: 1];
+}
+main_Image_2_in_1 = "Image_2";
+main_Image_2_in_3 = "X24,,";
+main_Image_2_in_4 = 1;
+main_Image_2_in_5 = [-1242.9 147.285 -57.7637];
+main_Image_2_in_6 = [1643.88 -31801.8 80621.4];
+main_Image_2_in_7 = 46528.4;
+main_Image_2_in_8 = 798;
+main_Image_2_in_9 = 0.836;
+main_Image_2_in_10 = [0.0132238 0.929834 0.367742];
+main_Image_2_in_11 = NULL;
+main_Image_2_in_12 = 0;
+main_Image_2_in_13 = NULL;
+main_Image_2_in_14 = 1;
+main_Image_2_in_15 = NULL;
+main_Image_2_in_16 = NULL;
+main_Image_2_in_17 = NULL;
+main_Image_2_in_18 = NULL;
+main_Image_2_in_19 = 0;
+main_Image_2_in_20 = NULL;
+main_Image_2_in_21 = NULL;
+main_Image_2_in_22 = "black";
+main_Image_2_in_23 = NULL;
+main_Image_2_in_25 = "/home/komatits/imagedx-1073744456";
+main_Image_2_in_26 = "tiff";
+main_Image_2_in_27 = NULL;
+main_Image_2_in_28 = NULL;
+main_Image_2_in_29 = NULL;
+main_Image_2_in_30 = NULL;
+main_Image_2_in_31 = NULL;
+main_Image_2_in_32 = NULL;
+main_Image_2_in_33 = NULL;
+main_Image_2_in_34 = NULL;
+main_Image_2_in_35 = NULL;
+main_Image_2_in_36 = NULL;
+main_Image_2_in_37 = NULL;
+main_Image_2_in_38 = NULL;
+main_Image_2_in_39 = NULL;
+main_Image_2_in_40 = NULL;
+main_Image_2_in_41 = "rotate";
+main_Image_2_in_42 = NULL;
+main_Image_2_in_43 = NULL;
+main_Image_2_in_44 = NULL;
+main_Image_2_in_45 = NULL;
+main_Image_2_in_46 = NULL;
+main_Image_2_in_47 = NULL;
+main_Image_2_in_48 = NULL;
+main_Image_2_in_49 = NULL;
+main_Image_2_out_2 = NULL;
+main_Render_1_in_3 = NULL;
+main_Render_1_out_1 = NULL;
+main_WriteImage_1_in_2 = "movie_asteroide.miff";
+main_WriteImage_1_in_3 = "miff";
+main_WriteImage_1_in_4 = NULL;
+Executive("product version 4 4 4");
+$sync
+
+sequence main();
+play;
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_rotating_Earth.cfg
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_rotating_Earth.cfg (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_rotating_Earth.cfg 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,133 @@
+//
+// time: Fri Oct 24 00:36:04 2008
+//
+// version: 3.2.0 (format), 4.4.4 (DX)
+//
+//
+// panel[0]: position = (0.0750,0.6983), size = 0.2781x0.1608, startup = 1, devstyle = 1, screen = 0
+// title: value = Control Panel
+//
+// workspace: width = 500, height = 500
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+// panel[2]: position = (0.3609,0.6983), size = 0.2776x0.1608, startup = 1, devstyle = 1, screen = 0
+// title: value = Control Panel
+//
+// workspace: width = 500, height = 500
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+// panel[3]: position = (0.0052,0.0250), size = 0.1953x0.3750, startup = 1, devstyle = 1, screen = 0
+// title: value = Control Panel
+//
+// workspace: width = 500, height = 500
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+// panel[4]: position = (0.0052,0.0250), size = 0.1953x0.3750, startup = 1, devstyle = 1, screen = 0
+// title: value = Control Panel
+//
+// workspace: width = 500, height = 500
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+// panel[5]: position = (0.0063,0.0283), size = 0.2234x0.4283, startup = 1, devstyle = 1, screen = 0
+// title: value = Control Panel
+//
+// workspace: width = 500, height = 500
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+// panel[6]: position = (0.0052,0.0250), size = 0.1953x0.3750, startup = 1, devstyle = 1, screen = 0
+// title: value = Control Panel
+//
+// workspace: width = 500, height = 500
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+// node Sequencer[2]:
+// vcr[2]: min = 2675, max = 4000, beg = 2675, end = 4000, cur = 2675, inc = 5, loop = off, step = off, pal = off
+// window: position = (0.0167,0.0142), size = 0.1458x0.0667, screen = 0
+// startup = 1
+//
+// node Colormap[1]:
+// input[1]: defaulting = 0, value = { [0.037383178 0.98947368] [1.0 1.0] }
+// input[2]: defaulting = 0, value = { [0.0 0.73684211] [0.97196262 0.72631579] }
+// input[3]: defaulting = 0, value = { [0.0 1.0] [0.98130841 1.0] }
+// input[4]: defaulting = 0, value = { [0.0 1.0] [1.0 1.0] }
+// input[5]: defaulting = 0, value = "Colormap_1"
+// input[7]: defaulting = 1, value = 1.0
+// input[8]: defaulting = 1, value = 1.0
+// input[9]: defaulting = 1, value = 20
+// input[12]: defaulting = 0, value = { 1.0 1.0 }
+// input[17]: defaulting = 0, value = 1.0
+// input[18]: defaulting = 0, value = 1.0
+// window: position = (0.0052,0.0250), size = 0.3385x0.3750, screen = 0
+//
+// interactor Scalar[1]: num_components = 1, value = 0.012
+// component[0]: minimum = -1e+06, maximum = 1e+06, global increment = 1, decimal = 5, global continuous = 0
+// instance: panel = 3, x = 5, y = 5, style = Stepper, vertical = 1, size = 148x55
+// local continuous: value = 0, mode = global
+// local increment[0]: value = 1, mode = global
+//
+// interactor Scalar[2]: num_components = 1, value = 0.016
+// component[0]: minimum = -1e+06, maximum = 1e+06, global increment = 1, decimal = 5, global continuous = 0
+// instance: panel = 5, x = 5, y = 5, style = Stepper, vertical = 1, size = 148x55
+// local continuous: value = 0, mode = global
+// local increment[0]: value = 1, mode = global
+//
+// node Colormap[5]:
+// input[1]: defaulting = 0, value = {[0 0.76666671 ] [0.071086608 0.75 ] [0.08559408 0.73076928 ] [0.1073553 0.70833331 ] [0.1363702 0.68181819 ] [0.15813141 0.65151513 ] [0.17263889 0.625 ] [0.1944001 0.6025641 ] [0.2306688 0.58333331 ] [0.26693749 0.56666672 ] [0.30320609 0.56652051 ] [0.3394748 0.56633502 ] [0.37574351 0.5660919 ] [0.41201219 0.5657596 ] [0.4482809 0.56473827 ] [0.48454961 0.56382978 ] [0.52081817 0.56218898 ] [0.55708688 0.55833328 ] [0.57884812 0.53571433 ] [0.5789932 0.53571433 ] [0.59328312 0.53571433 ] [0.5933556 0.25 ] [0.59342808 0.25 ] [0.60046422 0.3888889 ] [0.6006093 0.3888889 ] [0.60786313 0.25 ] [0.62962419 0.083333336 ] [0.66589302 0.1022013 ] [0.70216161 0.1126761 ] [0.73843032 0.1189139 ] [0.77469897 0.149635 ] [0.81096762 0.1426858 ] [0.84723628 0.13403261 ] [0.88350499 0.1255708 ] [0.9197737 0.1185682 ] [0.95604229 0.1111111 ] [0.99231112 0 ] [1 0 ] }
+// input[2]: defaulting = 0, value = {[0 1 ] [0.071086608 0.93333328 ] [0.08559408 0.86666667 ] [0.1073553 0.80000001 ] [0.1363702 0.73333329 ] [0.15813141 0.73333329 ] [0.17263889 0.80000001 ] [0.1944001 0.86666667 ] [0.2306688 0.93333328 ] [0.26693749 1 ] [0.30320609 0.89411771 ] [0.3394748 0.78823531 ] [0.37574351 0.6823529 ] [0.41201219 0.57647061 ] [0.4482809 0.47450981 ] [0.48454961 0.3686274 ] [0.52081817 0.26274511 ] [0.55708688 0.15686271 ] [0.57884812 0.054901958 ] [0.5789932 0.054901958 ] [0.59328312 0.054901958 ] [0.5933556 1 ] [0.59342808 1 ] [0.60046422 0.75 ] [0.6006093 0.75 ] [0.60786313 0.35964909 ] [0.62962419 0.27450979 ] [0.66589302 0.436214 ] [0.70216161 0.61739129 ] [0.73843032 0.8202765 ] [0.77469897 0.81547618 ] [0.81096762 0.847561 ] [0.84723628 0.88271612 ] [0.88350499 0.918239 ] [0.9197737 0.95512819 ] [0.95604229 1 ] [0.99231112 0.45061731 ] [1 0.33707869 ] }
+// input[3]: defaulting = 0, value = {[0 1 ] [0.071086608 1 ] [0.08559408 1 ] [0.1073553 1 ] [0.1363702 1 ] [0.15813141 1 ] [0.17263889 1 ] [0.1944001 1 ] [0.2306688 1 ] [0.26693749 1 ] [0.30320609 1 ] [0.3394748 1 ] [0.37574351 1 ] [0.41201219 1 ] [0.4482809 1 ] [0.48454961 1 ] [0.52081817 1 ] [0.55708688 1 ] [0.57884812 1 ] [0.5789932 1 ] [0.59328312 1 ] [0.5933556 0.40000001 ] [0.59342808 0.40000001 ] [0.60046422 0.80000001 ] [0.6006093 0.80000001 ] [0.60786313 0.89411771 ] [0.62962419 1 ] [0.66589302 0.95294118 ] [0.70216161 0.90196079 ] [0.73843032 0.8509804 ] [0.77469897 0.65882349 ] [0.81096762 0.64313728 ] [0.84723628 0.63529408 ] [0.88350499 0.62352937 ] [0.9197737 0.61176473 ] [0.95604229 0.60000002 ] [0.99231112 0.63529408 ] [1 0.69803917 ] }
+// input[4]: defaulting = 0, value = {[0 1 ] [1 1 ] }
+// input[5]: defaulting = 0, value = "Colormap_5"
+// input[7]: defaulting = 0, value = -8180.0
+// input[8]: defaulting = 0, value = 5606.0
+// input[9]: defaulting = 1, value = 20
+// input[12]: defaulting = 0, value = { -8180.0 5606.0 }
+// input[13]: defaulting = 0, value = {[0 0.76666671 ] [0.071086608 0.75 ] [0.08559408 0.73076928 ] [0.1073553 0.70833331 ] [0.1363702 0.68181819 ] [0.15813141 0.65151513 ] [0.17263889 0.625 ] [0.1944001 0.6025641 ] [0.2306688 0.58333331 ] [0.26693749 0.56666672 ] [0.30320609 0.56652051 ] [0.3394748 0.56633502 ] [0.37574351 0.5660919 ] [0.41201219 0.5657596 ] [0.4482809 0.56473827 ] [0.48454961 0.56382978 ] [0.52081817 0.56218898 ] [0.55708688 0.55833328 ] [0.57884812 0.53571433 ] [0.5789932 0.53571433 ] [0.59328312 0.53571433 ] [0.5933556 0.25 ] [0.59342808 0.25 ] [0.60046422 0.3888889 ] [0.6006093 0.3888889 ] [0.60786313 0.25 ] [0.62962419 0.083333336 ] [0.66589302 0.1022013 ] [0.70216161 0.1126761 ] [0.73843032 0.1189139 ] [0.77469897 0.149635 ] [0.81096762 0.1426858 ] [0.84723628 0.13403261 ] [0.88350499 0.1255708 ] [0.9197737 0.1185682 ] [0.95604229 0.1111111 ] [0.99231112 0 ] [1 0 ] }
+// input[14]: defaulting = 0, value = {[0 1 ] [0.071086608 0.93333328 ] [0.08559408 0.86666667 ] [0.1073553 0.80000001 ] [0.1363702 0.73333329 ] [0.15813141 0.73333329 ] [0.17263889 0.80000001 ] [0.1944001 0.86666667 ] [0.2306688 0.93333328 ] [0.26693749 1 ] [0.30320609 0.89411771 ] [0.3394748 0.78823531 ] [0.37574351 0.6823529 ] [0.41201219 0.57647061 ] [0.4482809 0.47450981 ] [0.48454961 0.3686274 ] [0.52081817 0.26274511 ] [0.55708688 0.15686271 ] [0.57884812 0.054901958 ] [0.5789932 0.054901958 ] [0.59328312 0.054901958 ] [0.5933556 1 ] [0.59342808 1 ] [0.60046422 0.75 ] [0.6006093 0.75 ] [0.60786313 0.35964909 ] [0.62962419 0.27450979 ] [0.66589302 0.436214 ] [0.70216161 0.61739129 ] [0.73843032 0.8202765 ] [0.77469897 0.81547618 ] [0.81096762 0.847561 ] [0.84723628 0.88271612 ] [0.88350499 0.918239 ] [0.9197737 0.95512819 ] [0.95604229 1 ] [0.99231112 0.45061731 ] [1 0.33707869 ] }
+// input[15]: defaulting = 0, value = {[0 1 ] [0.071086608 1 ] [0.08559408 1 ] [0.1073553 1 ] [0.1363702 1 ] [0.15813141 1 ] [0.17263889 1 ] [0.1944001 1 ] [0.2306688 1 ] [0.26693749 1 ] [0.30320609 1 ] [0.3394748 1 ] [0.37574351 1 ] [0.41201219 1 ] [0.4482809 1 ] [0.48454961 1 ] [0.52081817 1 ] [0.55708688 1 ] [0.57884812 1 ] [0.5789932 1 ] [0.59328312 1 ] [0.5933556 0.40000001 ] [0.59342808 0.40000001 ] [0.60046422 0.80000001 ] [0.6006093 0.80000001 ] [0.60786313 0.89411771 ] [0.62962419 1 ] [0.66589302 0.95294118 ] [0.70216161 0.90196079 ] [0.73843032 0.8509804 ] [0.77469897 0.65882349 ] [0.81096762 0.64313728 ] [0.84723628 0.63529408 ] [0.88350499 0.62352937 ] [0.9197737 0.61176473 ] [0.95604229 0.60000002 ] [0.99231112 0.63529408 ] [1 0.69803917 ] }
+// input[16]: defaulting = 0, value = {[0 1 ] [1 1 ] }
+// input[17]: defaulting = 0, value = -8180.0
+// input[18]: defaulting = 0, value = 5606.0
+// window: position = (0.0464,0.1200), size = 0.3385x0.3750, screen = 0
+//
+// node Colormap[6]:
+// input[1]: defaulting = 0, value = {[0 0.70731705 ] [0.49450549 0.51219511 ] [0.49450549 1 ] [0.99267399 1 ] }
+// input[2]: defaulting = 0, value = {[0.058608059 1 ] [0.50183147 1 ] [0.51648355 1 ] [1 1 ] }
+// input[3]: defaulting = 0, value = {[0 1 ] [0.49450549 0.5 ] [1 1 ] }
+// input[4]: defaulting = 0, value = {[0 1 ] [1 1 ] }
+// input[5]: defaulting = 0, value = "Colormap_6"
+// input[7]: defaulting = 1, value = -1.0
+// input[8]: defaulting = 1, value = 0.99000001
+// input[9]: defaulting = 1, value = 20
+// input[12]: defaulting = 0, value = { -1.0 0.99000001 }
+// input[13]: defaulting = 0, value = {[0 0.70731705 ] [0.49450549 0.51219511 ] [0.49450549 1 ] [0.99267399 1 ] }
+// input[14]: defaulting = 0, value = {[0.058608059 1 ] [0.50183147 1 ] [0.51648355 1 ] [1 1 ] }
+// input[15]: defaulting = 0, value = {[0 1 ] [0.49450549 0.5 ] [1 1 ] }
+// input[16]: defaulting = 0, value = {[0 1 ] [1 1 ] }
+// input[17]: defaulting = 0, value = -1.0
+// input[18]: defaulting = 0, value = 0.99000001
+// window: position = (0.0063,0.0283), size = 0.3870x0.4283, screen = 0
+//
+// node Image[4]:
+// depth: value = 24
+// window: position = (0.3932,0.3508), size = 0.5786x0.5575, screen = 0
+// input[1]: defaulting = 0, value = "Image_4"
+// input[4]: defaulting = 0, value = 1
+// input[5]: defaulting = 0, value = [-0.0283461 -0.0321944 0.0649886]
+// input[6]: defaulting = 0, value = [-1.8296 8.29494 3.80668]
+// input[7]: defaulting = 1, value = 3.90397
+// input[8]: defaulting = 0, value = 1097
+// input[9]: defaulting = 0, value = 0.572926
+// input[10]: defaulting = 0, value = [-0.0697647 -0.42138 0.904197]
+// input[11]: defaulting = 0, value = 23.6948
+// input[12]: defaulting = 0, value = 1
+// input[14]: defaulting = 0, value = 1
+// input[15]: defaulting = 1, value = "none"
+// input[16]: defaulting = 1, value = "none"
+// input[17]: defaulting = 0, value = 1
+// input[18]: defaulting = 0, value = 1
+// input[19]: defaulting = 0, value = 1
+// input[25]: defaulting = 0, value = "/home/komatits/movies_poster_rapport_CINES/initial_image_earth.tiff"
+// input[26]: defaulting = 0, value = "tiff gamma=1"
+// input[29]: defaulting = 1, value = 0
+// input[41]: defaulting = 0, value = "panzoom"
+// internal caching: 1
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_rotating_Earth.net
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_rotating_Earth.net (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/movie_network_DX_rotating_Earth.net 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,1306 @@
+//
+// time: Fri Oct 24 00:36:04 2008
+//
+// version: 3.2.0 (format), 4.4.4 (DX)
+//
+//
+// MODULE main
+// workspace: width = 1159, height = 1000
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+macro main(
+) -> (
+) {
+ //
+ // node Caption[1]: x = 974, y = 576, inputs = 9, label = Caption
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "SPECFEM3D / Dimitri Komatitsch et al. - Sichuan earthquake, May 12, 2008"
+ // input[2]: defaulting = 0, visible = 1, type = 8, value = [.5 .98]
+ // input[6]: defaulting = 0, visible = 0, type = 1, value = 25
+ // input[7]: defaulting = 0, visible = 0, type = 32, value = "roman_dser"
+ //
+main_Caption_1_out_1 =
+ Caption(
+ main_Caption_1_in_1,
+ main_Caption_1_in_2,
+ main_Caption_1_in_3,
+ main_Caption_1_in_4,
+ main_Caption_1_in_5,
+ main_Caption_1_in_6,
+ main_Caption_1_in_7,
+ main_Caption_1_in_8,
+ main_Caption_1_in_9
+ ) [instance: 1, cache: 1];
+ //
+ // node Sequencer[2]: x = 432, y = 24, inputs = 7, label = Sequencer
+ // input[1]: defaulting = 0, visible = 0, type = 32, value = "Sequencer_2"
+ // input[4]: defaulting = 1, visible = 1, type = 1, value = 2675
+ // input[5]: defaulting = 1, visible = 1, type = 1, value = 4000
+ // input[6]: defaulting = 1, visible = 0, type = 1, value = 5
+ // input[7]: defaulting = 0, visible = 0, type = 16777217, value = { 2675 4000 5 2675 4000 1 }
+ // vcr[2]: min = 2675, max = 4000, beg = 2675, end = 4000, cur = 2675, inc = 5, loop = off, step = off, pal = off
+ // window: position = (0.0167,0.0142), size = 0.1458x0.0667, screen = 0
+ //
+ main_Sequencer_2_out_1 = @frame;
+ //
+ // node Compute[4]: x = 414, y = 186, inputs = 3, label = Compute
+ // input[1]: defaulting = 0, visible = 0, type = 32, value = "$0*10"
+ // expression: value = a*10
+ // name[2]: value = a
+ // name[3]: value = b
+ //
+main_Compute_4_out_1 =
+ Compute(
+ main_Compute_4_in_1,
+ main_Sequencer_2_out_1,
+ main_Compute_4_in_3
+ ) [instance: 4, cache: 1];
+ //
+ // node Compute[5]: x = 680, y = 614, inputs = 3, label = Compute
+ // input[1]: defaulting = 0, visible = 0, type = 32, value = "int(($0-1)*0.001875 - 0.25351533)"
+ // expression: value = int((it-1)*0.001875 - 0.25351533)
+ // name[2]: value = it
+ // name[3]: value = b
+ //
+main_Compute_5_out_1 =
+ Compute(
+ main_Compute_5_in_1,
+ main_Compute_4_out_1,
+ main_Compute_5_in_3
+ ) [instance: 5, cache: 1];
+ //
+ // node Compute[2]: x = 807, y = 643, inputs = 3, label = Compute
+ // input[1]: defaulting = 0, visible = 0, type = 32, value = "int( 60*(($0-1)*0.001875 - 0.25351533) - 60*$1)"
+ // expression: value = int( 60*((it-1)*0.001875 - 0.25351533) - 60*minutes)
+ // name[2]: value = it
+ // name[3]: value = minutes
+ //
+main_Compute_2_out_1 =
+ Compute(
+ main_Compute_2_in_1,
+ main_Compute_4_out_1,
+ main_Compute_5_out_1
+ ) [instance: 2, cache: 1];
+ //
+ // node Format[3]: x = 806, y = 744, inputs = 3, label = Format
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "Time = %3d min %2.2d s"
+ //
+main_Format_3_out_1 =
+ Format(
+ main_Format_3_in_1,
+ main_Compute_5_out_1,
+ main_Compute_2_out_1
+ ) [instance: 3, cache: 1];
+ //
+ // node Caption[2]: x = 847, y = 830, inputs = 9, label = Caption
+ // input[2]: defaulting = 0, visible = 1, type = 8, value = [.93 .08]
+ // input[6]: defaulting = 0, visible = 0, type = 1, value = 24
+ // input[7]: defaulting = 0, visible = 0, type = 32, value = "area"
+ //
+main_Caption_2_out_1 =
+ Caption(
+ main_Format_3_out_1,
+ main_Caption_2_in_2,
+ main_Caption_2_in_3,
+ main_Caption_2_in_4,
+ main_Caption_2_in_5,
+ main_Caption_2_in_6,
+ main_Caption_2_in_7,
+ main_Caption_2_in_8,
+ main_Caption_2_in_9
+ ) [instance: 2, cache: 1];
+ //
+ // node Import[5]: x = 786, y = 2, inputs = 6, label = Import
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "earth_main_cities.dx"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "dx"
+ //
+main_Import_5_out_1 =
+ Import(
+ main_Import_5_in_1,
+ main_Import_5_in_2,
+ main_Import_5_in_3,
+ main_Import_5_in_4,
+ main_Import_5_in_5,
+ main_Import_5_in_6
+ ) [instance: 5, cache: 1];
+ //
+ // node Colormap[1]: x = 801, y = 94, inputs = 19, label = Colormap
+ // input[1]: defaulting = 0, visible = 0, type = 16777224, value = { [0.037383178 0.98947368] [1.0 1.0] }
+ // input[2]: defaulting = 0, visible = 0, type = 16777224, value = { [0.0 0.73684211] [0.97196262 0.72631579] }
+ // input[3]: defaulting = 0, visible = 0, type = 16777224, value = { [0.0 1.0] [0.98130841 1.0] }
+ // input[4]: defaulting = 0, visible = 0, type = 16777224, value = { [0.0 1.0] [1.0 1.0] }
+ // input[5]: defaulting = 0, visible = 0, type = 32, value = "Colormap_1"
+ // input[7]: defaulting = 1, visible = 0, type = 5, value = 1.0
+ // input[8]: defaulting = 1, visible = 0, type = 5, value = 1.0
+ // input[9]: defaulting = 1, visible = 0, type = 1, value = 20
+ // input[12]: defaulting = 0, visible = 0, type = 16777221, value = { 1.0 1.0 }
+ // input[17]: defaulting = 0, visible = 0, type = 5, value = 1.0
+ // input[18]: defaulting = 0, visible = 0, type = 5, value = 1.0
+ // window: position = (0.0052,0.0250), size = 0.3385x0.3750, screen = 0
+ //
+main_Colormap_1_out_1[cache: 2],
+main_Colormap_1_out_2[cache: 2] =
+ Colormap(
+ main_Colormap_1_in_1,
+ main_Colormap_1_in_2,
+ main_Colormap_1_in_3,
+ main_Colormap_1_in_4,
+ main_Colormap_1_in_5,
+ main_Import_5_out_1,
+ main_Colormap_1_in_7,
+ main_Colormap_1_in_8,
+ main_Colormap_1_in_9,
+ main_Colormap_1_in_10,
+ main_Colormap_1_in_11,
+ main_Colormap_1_in_12,
+ main_Colormap_1_in_13,
+ main_Colormap_1_in_14,
+ main_Colormap_1_in_15,
+ main_Colormap_1_in_16,
+ main_Colormap_1_in_17,
+ main_Colormap_1_in_18,
+ main_Colormap_1_in_19
+ ) [instance: 1, cache: 1];
+ //
+ // node Color[1]: x = 643, y = 166, inputs = 5, label = Color
+ // input[3]: defaulting = 1, visible = 1, type = 5, value = 1.0
+ //
+main_Color_1_out_1 =
+ Color(
+ main_Import_5_out_1,
+ main_Colormap_1_out_1,
+ main_Color_1_in_3,
+ main_Color_1_in_4,
+ main_Color_1_in_5
+ ) [instance: 1, cache: 1];
+ //
+ // node ShowPositions[1]: x = 624, y = 309, inputs = 2, label = ShowPositions
+ //
+main_ShowPositions_1_out_1 =
+ ShowPositions(
+ main_Color_1_out_1,
+ main_ShowPositions_1_in_2
+ ) [instance: 1, cache: 1];
+ //
+ // node Scalar[1]: x = 771, y = 293, inputs = 11, label = Scalar
+ // input[1]: defaulting = 0, visible = 0, type = 32, value = "Scalar_1"
+ // input[3]: defaulting = 0, visible = 0, type = 5, value = 0.012
+ // input[5]: defaulting = 1, visible = 0, type = 5, value = -1000000.0
+ // input[6]: defaulting = 1, visible = 0, type = 5, value = 1000000.0
+ // input[7]: defaulting = 1, visible = 0, type = 5, value = 1.0
+ // input[9]: defaulting = 1, visible = 0, type = 1, value = 5
+ // output[1]: visible = 1, type = 5, value = 0.012
+ //
+ //
+ // node Glyph[1]: x = 648, y = 429, inputs = 7, label = Glyph
+ //
+main_Glyph_1_out_1 =
+ Glyph(
+ main_ShowPositions_1_out_1,
+ main_Glyph_1_in_2,
+ main_Glyph_1_in_3,
+ main_Scalar_1_out_1,
+ main_Glyph_1_in_5,
+ main_Glyph_1_in_6,
+ main_Glyph_1_in_7
+ ) [instance: 1, cache: 1];
+ //
+ // node Import[9]: x = 1087, y = 11, inputs = 6, label = Import
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "epicenter.dx"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "dx"
+ //
+main_Import_9_out_1 =
+ Import(
+ main_Import_9_in_1,
+ main_Import_9_in_2,
+ main_Import_9_in_3,
+ main_Import_9_in_4,
+ main_Import_9_in_5,
+ main_Import_9_in_6
+ ) [instance: 9, cache: 1];
+ //
+ // node Color[5]: x = 944, y = 175, inputs = 5, label = Color
+ // input[2]: defaulting = 0, visible = 1, type = 32, value = "cyan"
+ // input[3]: defaulting = 1, visible = 1, type = 5, value = 1.0
+ //
+main_Color_5_out_1 =
+ Color(
+ main_Import_9_out_1,
+ main_Color_5_in_2,
+ main_Color_5_in_3,
+ main_Color_5_in_4,
+ main_Color_5_in_5
+ ) [instance: 5, cache: 1];
+ //
+ // node ShowPositions[2]: x = 925, y = 318, inputs = 2, label = ShowPositions
+ //
+main_ShowPositions_2_out_1 =
+ ShowPositions(
+ main_Color_5_out_1,
+ main_ShowPositions_2_in_2
+ ) [instance: 2, cache: 1];
+ //
+ // node Scalar[2]: x = 1072, y = 302, inputs = 11, label = Scalar
+ // input[1]: defaulting = 0, visible = 0, type = 32, value = "Scalar_2"
+ // input[3]: defaulting = 0, visible = 0, type = 5, value = 0.016
+ // input[5]: defaulting = 1, visible = 0, type = 5, value = -1000000.0
+ // input[6]: defaulting = 1, visible = 0, type = 5, value = 1000000.0
+ // input[7]: defaulting = 1, visible = 0, type = 5, value = 1.0
+ // input[9]: defaulting = 1, visible = 0, type = 1, value = 5
+ // output[1]: visible = 1, type = 5, value = 0.016
+ //
+ //
+ // node Glyph[2]: x = 949, y = 438, inputs = 7, label = Glyph
+ // input[2]: defaulting = 0, visible = 1, type = 32, value = "diamond"
+ //
+main_Glyph_2_out_1 =
+ Glyph(
+ main_ShowPositions_2_out_1,
+ main_Glyph_2_in_2,
+ main_Glyph_2_in_3,
+ main_Scalar_2_out_1,
+ main_Glyph_2_in_5,
+ main_Glyph_2_in_6,
+ main_Glyph_2_in_7
+ ) [instance: 2, cache: 1];
+ //
+ // node Collect[2]: x = 684, y = 527, inputs = 4, label = Collect
+ //
+main_Collect_2_out_1 =
+ Collect(
+ main_Glyph_1_out_1,
+ main_Glyph_2_out_1,
+ main_Collect_2_in_3,
+ main_Collect_2_in_4
+ ) [instance: 2, cache: 1];
+ //
+ // node Import[2]: x = 57, y = 69, inputs = 6, label = Import
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "earth_topo_bathy.dx"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "dx"
+ //
+main_Import_2_out_1 =
+ Import(
+ main_Import_2_in_1,
+ main_Import_2_in_2,
+ main_Import_2_in_3,
+ main_Import_2_in_4,
+ main_Import_2_in_5,
+ main_Import_2_in_6
+ ) [instance: 2, cache: 1];
+ //
+ // node Import[6]: x = 195, y = 20, inputs = 6, label = Import
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "GMT_globe_palette_opaque.cm"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "cm"
+ //
+main_Import_6_out_1 =
+ Import(
+ main_Import_6_in_1,
+ main_Import_6_in_2,
+ main_Import_6_in_3,
+ main_Import_6_in_4,
+ main_Import_6_in_5,
+ main_Import_6_in_6
+ ) [instance: 6, cache: 1];
+ //
+ // node Import[10]: x = 301, y = 17, inputs = 6, label = Import
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "GMT_globe_palette_transparent.cm"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "cm"
+ //
+main_Import_10_out_1 =
+ Import(
+ main_Import_10_in_1,
+ main_Import_10_in_2,
+ main_Import_10_in_3,
+ main_Import_10_in_4,
+ main_Import_10_in_5,
+ main_Import_10_in_6
+ ) [instance: 10, cache: 1];
+ //
+ // node Collect[4]: x = 282, y = 94, inputs = 2, label = Collect
+ //
+main_Collect_4_out_1 =
+ Collect(
+ main_Import_6_out_1,
+ main_Import_10_out_1
+ ) [instance: 4, cache: 1];
+ //
+ // node Select[1]: x = 283, y = 166, inputs = 3, label = Select
+ // input[2]: defaulting = 0, visible = 1, type = 1, value = 0
+ //
+main_Select_1_out_1 =
+ Select(
+ main_Collect_4_out_1,
+ main_Select_1_in_2,
+ main_Select_1_in_3
+ ) [instance: 1, cache: 1];
+ //
+ // node Colormap[5]: x = 263, y = 270, inputs = 19, label = Colormap
+ // input[1]: defaulting = 0, visible = 0, type = 16777224, value = {[0 0.76666671 ] [0.071086608 0.75 ] [0.08559408 0.73076928 ] [0.1073553 0.70833331 ] [0.1363702 0.68181819 ] [0.15813141 0.65151513 ] [0.17263889 0.625 ] [0.1944001 0.6025641 ] [0.2306688 0.58333331 ] [0.26693749 0.56666672 ] [0.30320609 0.56652051 ] [0.3394748 0.56633502 ] [0.37574351 0.5660919 ] [0.41201219 0.5657596 ] [0.4482809 0.56473827 ] [0.48454961 0.56382978 ] [0.52081817 0.56218898 ] [0.55708688 0.55833328 ] [0.57884812 0.53571433 ] [0.5789932 0.53571433 ] [0.59328312 0.53571433 ] [0.5933556 0.25 ] [0.59342808 0.25 ] [0.60046422 0.3888889 ] [0.6006093 0.3888889 ] [0.60786313 0.25 ] [0.62962419 0.083333336 ] [0.66589302 0.1022013 ] [0.70216161 0.1126761 ] [0.73843032 0.1189139 ] [0.77469897 0.149635 ] [0.81096762 0.1426858 ] [0.84723628 0.13403261 ] [0.88350499 0.1255708 ] [0.9197737 0.1185682 ] [0.95604229 0.1111111 ] [0.99231112 0 ] [1 0 ] }
+ // input[2]: defaulting = 0, visible = 0, type = 16777224, value = {[0 1 ] [0.071086608 0.93333328 ] [0.08559408 0.86666667 ] [0.1073553 0.80000001 ] [0.1363702 0.73333329 ] [0.15813141 0.73333329 ] [0.17263889 0.80000001 ] [0.1944001 0.86666667 ] [0.2306688 0.93333328 ] [0.26693749 1 ] [0.30320609 0.89411771 ] [0.3394748 0.78823531 ] [0.37574351 0.6823529 ] [0.41201219 0.57647061 ] [0.4482809 0.47450981 ] [0.48454961 0.3686274 ] [0.52081817 0.26274511 ] [0.55708688 0.15686271 ] [0.57884812 0.054901958 ] [0.5789932 0.054901958 ] [0.59328312 0.054901958 ] [0.5933556 1 ] [0.59342808 1 ] [0.60046422 0.75 ] [0.6006093 0.75 ] [0.60786313 0.35964909 ] [0.62962419 0.27450979 ] [0.66589302 0.436214 ] [0.70216161 0.61739129 ] [0.73843032 0.8202765 ] [0.77469897 0.81547618 ] [0.81096762 0.847561 ] [0.84723628 0.88271612 ] [0.88350499 0.918239 ] [0.9197737 0.95512819 ] [0.95604229 1 ] [0.99231112 0.45061731 ] [1 0.33707869 ] }
+ // input[3]: defaulting = 0, visible = 0, type = 16777224, value = {[0 1 ] [0.071086608 1 ] [0.08559408 1 ] [0.1073553 1 ] [0.1363702 1 ] [0.15813141 1 ] [0.17263889 1 ] [0.1944001 1 ] [0.2306688 1 ] [0.26693749 1 ] [0.30320609 1 ] [0.3394748 1 ] [0.37574351 1 ] [0.41201219 1 ] [0.4482809 1 ] [0.48454961 1 ] [0.52081817 1 ] [0.55708688 1 ] [0.57884812 1 ] [0.5789932 1 ] [0.59328312 1 ] [0.5933556 0.40000001 ] [0.59342808 0.40000001 ] [0.60046422 0.80000001 ] [0.6006093 0.80000001 ] [0.60786313 0.89411771 ] [0.62962419 1 ] [0.66589302 0.95294118 ] [0.70216161 0.90196079 ] [0.73843032 0.8509804 ] [0.77469897 0.65882349 ] [0.81096762 0.64313728 ] [0.84723628 0.63529408 ] [0.88350499 0.62352937 ] [0.9197737 0.61176473 ] [0.95604229 0.60000002 ] [0.99231112 0.63529408 ] [1 0.69803917 ] }
+ // input[4]: defaulting = 0, visible = 0, type = 16777224, value = {[0 1 ] [1 1 ] }
+ // input[5]: defaulting = 0, visible = 0, type = 32, value = "Colormap_5"
+ // input[7]: defaulting = 0, visible = 0, type = 5, value = -8180.0
+ // input[8]: defaulting = 0, visible = 0, type = 5, value = 5606.0
+ // input[9]: defaulting = 1, visible = 0, type = 1, value = 20
+ // input[12]: defaulting = 0, visible = 0, type = 16777221, value = { -8180.0 5606.0 }
+ // input[13]: defaulting = 0, visible = 0, type = 16777224, value = {[0 0.76666671 ] [0.071086608 0.75 ] [0.08559408 0.73076928 ] [0.1073553 0.70833331 ] [0.1363702 0.68181819 ] [0.15813141 0.65151513 ] [0.17263889 0.625 ] [0.1944001 0.6025641 ] [0.2306688 0.58333331 ] [0.26693749 0.56666672 ] [0.30320609 0.56652051 ] [0.3394748 0.56633502 ] [0.37574351 0.5660919 ] [0.41201219 0.5657596 ] [0.4482809 0.56473827 ] [0.48454961 0.56382978 ] [0.52081817 0.56218898 ] [0.55708688 0.55833328 ] [0.57884812 0.53571433 ] [0.5789932 0.53571433 ] [0.59328312 0.53571433 ] [0.5933556 0.25 ] [0.59342808 0.25 ] [0.60046422 0.3888889 ] [0.6006093 0.3888889 ] [0.60786313 0.25 ] [0.62962419 0.083333336 ] [0.66589302 0.1022013 ] [0.70216161 0.1126761 ] [0.73843032 0.1189139 ] [0.77469897 0.149635 ] [0.81096762 0.1426858 ] [0.84723628 0.13403261 ] [0.88350499 0.1255708 ] [0.9197737 0.1185682 ] [0.95604229 0.1111111 ] [0.99231112 0 ] [1 0 ] }
+ // input[14]: defaulting = 0, visible = 0, type = 16777224, value = {[0 1 ] [0.071086608 0.93333328 ] [0.08559408 0.86666667 ] [0.1073553 0.80000001 ] [0.1363702 0.73333329 ] [0.15813141 0.73333329 ] [0.17263889 0.80000001 ] [0.1944001 0.86666667 ] [0.2306688 0.93333328 ] [0.26693749 1 ] [0.30320609 0.89411771 ] [0.3394748 0.78823531 ] [0.37574351 0.6823529 ] [0.41201219 0.57647061 ] [0.4482809 0.47450981 ] [0.48454961 0.3686274 ] [0.52081817 0.26274511 ] [0.55708688 0.15686271 ] [0.57884812 0.054901958 ] [0.5789932 0.054901958 ] [0.59328312 0.054901958 ] [0.5933556 1 ] [0.59342808 1 ] [0.60046422 0.75 ] [0.6006093 0.75 ] [0.60786313 0.35964909 ] [0.62962419 0.27450979 ] [0.66589302 0.436214 ] [0.70216161 0.61739129 ] [0.73843032 0.8202765 ] [0.77469897 0.81547618 ] [0.81096762 0.847561 ] [0.84723628 0.88271612 ] [0.88350499 0.918239 ] [0.9197737 0.95512819 ] [0.95604229 1 ] [0.99231112 0.45061731 ] [1 0.33707869 ] }
+ // input[15]: defaulting = 0, visible = 0, type = 16777224, value = {[0 1 ] [0.071086608 1 ] [0.08559408 1 ] [0.1073553 1 ] [0.1363702 1 ] [0.15813141 1 ] [0.17263889 1 ] [0.1944001 1 ] [0.2306688 1 ] [0.26693749 1 ] [0.30320609 1 ] [0.3394748 1 ] [0.37574351 1 ] [0.41201219 1 ] [0.4482809 1 ] [0.48454961 1 ] [0.52081817 1 ] [0.55708688 1 ] [0.57884812 1 ] [0.5789932 1 ] [0.59328312 1 ] [0.5933556 0.40000001 ] [0.59342808 0.40000001 ] [0.60046422 0.80000001 ] [0.6006093 0.80000001 ] [0.60786313 0.89411771 ] [0.62962419 1 ] [0.66589302 0.95294118 ] [0.70216161 0.90196079 ] [0.73843032 0.8509804 ] [0.77469897 0.65882349 ] [0.81096762 0.64313728 ] [0.84723628 0.63529408 ] [0.88350499 0.62352937 ] [0.9197737 0.61176473 ] [0.95604229 0.60000002 ] [0.99231112 0.63529408 ] [1 0.69803917 ] }
+ // input[16]: defaulting = 0, visible = 0, type = 16777224, value = {[0 1 ] [1 1 ] }
+ // input[17]: defaulting = 0, visible = 0, type = 5, value = -8180.0
+ // input[18]: defaulting = 0, visible = 0, type = 5, value = 5606.0
+ // window: position = (0.0464,0.1200), size = 0.3385x0.3750, screen = 0
+ //
+main_Colormap_5_out_1[cache: 2],
+main_Colormap_5_out_2[cache: 2] =
+ Colormap(
+ main_Colormap_5_in_1,
+ main_Colormap_5_in_2,
+ main_Colormap_5_in_3,
+ main_Colormap_5_in_4,
+ main_Colormap_5_in_5,
+ main_Colormap_5_in_6,
+ main_Colormap_5_in_7,
+ main_Colormap_5_in_8,
+ main_Colormap_5_in_9,
+ main_Select_1_out_1,
+ main_Select_1_out_1,
+ main_Colormap_5_in_12,
+ main_Colormap_5_in_13,
+ main_Colormap_5_in_14,
+ main_Colormap_5_in_15,
+ main_Colormap_5_in_16,
+ main_Colormap_5_in_17,
+ main_Colormap_5_in_18,
+ main_Colormap_5_in_19
+ ) [instance: 5, cache: 1];
+ //
+ // node Color[2]: x = 215, y = 354, inputs = 5, label = Color
+ //
+main_Color_2_out_1 =
+ Color(
+ main_Import_2_out_1,
+ main_Colormap_5_out_1,
+ main_Colormap_5_out_2,
+ main_Color_2_in_4,
+ main_Color_2_in_5
+ ) [instance: 2, cache: 1];
+ //
+ // node Format[4]: x = 158, y = 144, inputs = 3, label = Format
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "/media/disk320GB/DX_movie_%6.6d.dx"
+ //
+main_Format_4_out_1 =
+ Format(
+ main_Format_4_in_1,
+ main_Compute_4_out_1,
+ main_Format_4_in_3
+ ) [instance: 4, cache: 1];
+ //
+ // node Import[7]: x = 14, y = 261, inputs = 6, label = Import
+ // input[1]: defaulting = 1, visible = 1, type = 32, value = "DX_movie_014100.dx"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "dx"
+ //
+main_Import_7_out_1 =
+ Import(
+ main_Format_4_out_1,
+ main_Import_7_in_2,
+ main_Import_7_in_3,
+ main_Import_7_in_4,
+ main_Import_7_in_5,
+ main_Import_7_in_6
+ ) [instance: 7, cache: 1];
+ //
+ // node Import[8]: x = 109, y = 263, inputs = 6, label = Import
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "red_blue_waves.cm"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "cm"
+ //
+main_Import_8_out_1 =
+ Import(
+ main_Import_8_in_1,
+ main_Import_8_in_2,
+ main_Import_8_in_3,
+ main_Import_8_in_4,
+ main_Import_8_in_5,
+ main_Import_8_in_6
+ ) [instance: 8, cache: 1];
+ //
+ // node Colormap[6]: x = 70, y = 376, inputs = 19, label = Colormap
+ // input[1]: defaulting = 0, visible = 0, type = 16777224, value = {[0 0.70731705 ] [0.49450549 0.51219511 ] [0.49450549 1 ] [0.99267399 1 ] }
+ // input[2]: defaulting = 0, visible = 0, type = 16777224, value = {[0.058608059 1 ] [0.50183147 1 ] [0.51648355 1 ] [1 1 ] }
+ // input[3]: defaulting = 0, visible = 0, type = 16777224, value = {[0 1 ] [0.49450549 0.5 ] [1 1 ] }
+ // input[4]: defaulting = 0, visible = 0, type = 16777224, value = {[0 1 ] [1 1 ] }
+ // input[5]: defaulting = 0, visible = 0, type = 32, value = "Colormap_6"
+ // input[7]: defaulting = 1, visible = 0, type = 5, value = -1.0
+ // input[8]: defaulting = 1, visible = 0, type = 5, value = 0.99000001
+ // input[9]: defaulting = 1, visible = 0, type = 1, value = 20
+ // input[12]: defaulting = 0, visible = 0, type = 16777221, value = { -1.0 0.99000001 }
+ // input[13]: defaulting = 0, visible = 0, type = 16777224, value = {[0 0.70731705 ] [0.49450549 0.51219511 ] [0.49450549 1 ] [0.99267399 1 ] }
+ // input[14]: defaulting = 0, visible = 0, type = 16777224, value = {[0.058608059 1 ] [0.50183147 1 ] [0.51648355 1 ] [1 1 ] }
+ // input[15]: defaulting = 0, visible = 0, type = 16777224, value = {[0 1 ] [0.49450549 0.5 ] [1 1 ] }
+ // input[16]: defaulting = 0, visible = 0, type = 16777224, value = {[0 1 ] [1 1 ] }
+ // input[17]: defaulting = 0, visible = 0, type = 5, value = -1.0
+ // input[18]: defaulting = 0, visible = 0, type = 5, value = 0.99000001
+ // window: position = (0.0063,0.0283), size = 0.3870x0.4283, screen = 0
+ //
+main_Colormap_6_out_1[cache: 2],
+main_Colormap_6_out_2[cache: 2] =
+ Colormap(
+ main_Colormap_6_in_1,
+ main_Colormap_6_in_2,
+ main_Colormap_6_in_3,
+ main_Colormap_6_in_4,
+ main_Colormap_6_in_5,
+ main_Import_7_out_1,
+ main_Colormap_6_in_7,
+ main_Colormap_6_in_8,
+ main_Colormap_6_in_9,
+ main_Import_8_out_1,
+ main_Import_8_out_1,
+ main_Colormap_6_in_12,
+ main_Colormap_6_in_13,
+ main_Colormap_6_in_14,
+ main_Colormap_6_in_15,
+ main_Colormap_6_in_16,
+ main_Colormap_6_in_17,
+ main_Colormap_6_in_18,
+ main_Colormap_6_in_19
+ ) [instance: 6, cache: 1];
+ //
+ // node Color[3]: x = 41, y = 461, inputs = 5, label = Color
+ //
+main_Color_3_out_1 =
+ Color(
+ main_Import_7_out_1,
+ main_Colormap_6_out_1,
+ main_Colormap_6_out_2,
+ main_Color_3_in_4,
+ main_Color_3_in_5
+ ) [instance: 3, cache: 1];
+ //
+ // node Import[4]: x = 504, y = 112, inputs = 6, label = Import
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "DX_continent_boundaries.dx"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "dx"
+ //
+main_Import_4_out_1 =
+ Import(
+ main_Import_4_in_1,
+ main_Import_4_in_2,
+ main_Import_4_in_3,
+ main_Import_4_in_4,
+ main_Import_4_in_5,
+ main_Import_4_in_6
+ ) [instance: 4, cache: 1];
+ //
+ // node Color[4]: x = 521, y = 216, inputs = 5, label = Color
+ // input[2]: defaulting = 0, visible = 1, type = 32, value = "orange"
+ //
+main_Color_4_out_1 =
+ Color(
+ main_Import_4_out_1,
+ main_Color_4_in_2,
+ main_Color_4_in_3,
+ main_Color_4_in_4,
+ main_Color_4_in_5
+ ) [instance: 4, cache: 1];
+ //
+ // node Options[2]: x = 487, y = 316, inputs = 5, label = Options
+ // input[2]: defaulting = 0, visible = 1, type = 32, value = "rendering mode"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "hardware"
+ // input[4]: defaulting = 0, visible = 1, type = 32, value = "line width"
+ // input[5]: defaulting = 0, visible = 1, type = 29, value = 1.5
+ //
+main_Options_2_out_1 =
+ Options(
+ main_Color_4_out_1,
+ main_Options_2_in_2,
+ main_Options_2_in_3,
+ main_Options_2_in_4,
+ main_Options_2_in_5
+ ) [instance: 2, cache: 1];
+ //
+ // node Collect[1]: x = 228, y = 515, inputs = 4, label = Collect
+ //
+main_Collect_1_out_1 =
+ Collect(
+ main_Collect_2_out_1,
+ main_Color_2_out_1,
+ main_Color_3_out_1,
+ main_Options_2_out_1
+ ) [instance: 1, cache: 1];
+ //
+ // node Compute[1]: x = 386, y = 500, inputs = 3, label = Compute
+ // input[1]: defaulting = 0, visible = 0, type = 32, value = "$0*85./14100."
+ // expression: value = it*85./14100.
+ // name[2]: value = it
+ // name[3]: value = b
+ //
+main_Compute_1_out_1 =
+ Compute(
+ main_Compute_1_in_1,
+ main_Compute_4_out_1,
+ main_Compute_1_in_3
+ ) [instance: 1, cache: 1];
+ //
+ // node Rotate[1]: x = 359, y = 633, inputs = 7, label = Rotate
+ // input[2]: defaulting = 0, visible = 1, type = 32, value = "z"
+ //
+main_Rotate_1_out_1 =
+ Rotate(
+ main_Collect_1_out_1,
+ main_Rotate_1_in_2,
+ main_Compute_1_out_1,
+ main_Rotate_1_in_4,
+ main_Rotate_1_in_5,
+ main_Rotate_1_in_6,
+ main_Rotate_1_in_7
+ ) [instance: 1, cache: 1];
+ //
+ // node Collect[3]: x = 261, y = 751, inputs = 4, label = Collect
+ //
+main_Collect_3_out_1 =
+ Collect(
+ main_Caption_1_out_1,
+ main_Rotate_1_out_1,
+ main_Caption_2_out_1,
+ main_Collect_3_in_4
+ ) [instance: 3, cache: 1];
+ //
+ // node Compute[6]: x = 902, y = 640, inputs = 3, label = Compute
+ // input[1]: defaulting = 0, visible = 0, type = 32, value = "0"
+ // expression: value = 0
+ // name[2]: value = a
+ // name[3]: value = b
+ //
+main_Compute_6_out_1 =
+ Compute(
+ main_Compute_6_in_1,
+ main_Compute_6_in_2,
+ main_Compute_6_in_3
+ ) [instance: 6, cache: 1];
+ //
+ // node Format[2]: x = 617, y = 762, inputs = 3, label = Format
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "imagemovie%6.6d.tiff"
+ //
+main_Format_2_out_1 =
+ Format(
+ main_Format_2_in_1,
+ main_Compute_4_out_1,
+ main_Format_2_in_3
+ ) [instance: 2, cache: 1];
+ //
+ // node Image[4]: x = 429, y = 792, inputs = 49, label = Image
+ // input[1]: defaulting = 0, visible = 0, type = 67108863, value = "Image_4"
+ // input[4]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[5]: defaulting = 0, visible = 0, type = 8, value = [-0.0283461 -0.0321944 0.0649886]
+ // input[6]: defaulting = 0, visible = 0, type = 8, value = [-1.8296 8.29494 3.80668]
+ // input[7]: defaulting = 1, visible = 0, type = 5, value = 3.90397
+ // input[8]: defaulting = 0, visible = 0, type = 1, value = 1097
+ // input[9]: defaulting = 0, visible = 0, type = 5, value = 0.572926
+ // input[10]: defaulting = 0, visible = 0, type = 8, value = [-0.0697647 -0.42138 0.904197]
+ // input[11]: defaulting = 0, visible = 0, type = 5, value = 23.6948
+ // input[12]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[14]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[15]: defaulting = 1, visible = 0, type = 32, value = "none"
+ // input[16]: defaulting = 1, visible = 0, type = 32, value = "none"
+ // input[17]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[18]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[19]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[25]: defaulting = 0, visible = 0, type = 32, value = "/home/komatits/movies_poster_rapport_CINES/initial_image_earth.tiff"
+ // input[26]: defaulting = 0, visible = 0, type = 32, value = "tiff gamma=1"
+ // input[29]: defaulting = 1, visible = 0, type = 3, value = 0
+ // input[41]: defaulting = 0, visible = 0, type = 32, value = "panzoom"
+ // depth: value = 24
+ // window: position = (0.3932,0.3508), size = 0.5786x0.5575, screen = 0
+ // internal caching: 1
+ //
+main_Image_4_out_1,
+main_Image_4_out_2,
+main_Image_4_out_3 =
+ Image(
+ main_Image_4_in_1,
+ main_Collect_3_out_1,
+ main_Image_4_in_3,
+ main_Image_4_in_4,
+ main_Image_4_in_5,
+ main_Image_4_in_6,
+ main_Image_4_in_7,
+ main_Image_4_in_8,
+ main_Image_4_in_9,
+ main_Image_4_in_10,
+ main_Image_4_in_11,
+ main_Image_4_in_12,
+ main_Image_4_in_13,
+ main_Image_4_in_14,
+ main_Image_4_in_15,
+ main_Image_4_in_16,
+ main_Image_4_in_17,
+ main_Image_4_in_18,
+ main_Image_4_in_19,
+ main_Image_4_in_20,
+ main_Image_4_in_21,
+ main_Image_4_in_22,
+ main_Image_4_in_23,
+ main_Image_4_in_24,
+ main_Image_4_in_25,
+ main_Image_4_in_26,
+ main_Image_4_in_27,
+ main_Image_4_in_28,
+ main_Image_4_in_29,
+ main_Image_4_in_30,
+ main_Image_4_in_31,
+ main_Image_4_in_32,
+ main_Image_4_in_33,
+ main_Image_4_in_34,
+ main_Image_4_in_35,
+ main_Image_4_in_36,
+ main_Image_4_in_37,
+ main_Image_4_in_38,
+ main_Image_4_in_39,
+ main_Image_4_in_40,
+ main_Image_4_in_41,
+ main_Image_4_in_42,
+ main_Image_4_in_43,
+ main_Image_4_in_44,
+ main_Image_4_in_45,
+ main_Image_4_in_46,
+ main_Image_4_in_47,
+ main_Image_4_in_48,
+ main_Image_4_in_49
+ ) [instance: 4, cache: 1];
+ //
+ // node Render[2]: x = 340, y = 869, inputs = 3, label = Render
+ //
+main_Render_2_out_1 =
+ Render(
+ main_Collect_3_out_1,
+ main_Image_4_out_2,
+ main_Render_2_in_3
+ ) [instance: 2, cache: 1];
+ //
+ // node WriteImage[2]: x = 398, y = 938, inputs = 4, label = WriteImage
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "tiff gamma=1"
+ //
+ WriteImage(
+ main_Render_2_out_1,
+ main_Format_2_out_1,
+ main_WriteImage_2_in_3,
+ main_WriteImage_2_in_4
+ ) [instance: 2, cache: 1];
+// network: end of macro body
+CacheScene(main_Image_4_in_1, main_Image_4_out_1, main_Image_4_out_2);
+}
+main_Caption_1_in_1 = "SPECFEM3D / Dimitri Komatitsch et al. - Sichuan earthquake, May 12, 2008";
+main_Caption_1_in_2 = [.5 .98];
+main_Caption_1_in_3 = NULL;
+main_Caption_1_in_4 = NULL;
+main_Caption_1_in_5 = NULL;
+main_Caption_1_in_6 = 25;
+main_Caption_1_in_7 = "roman_dser";
+main_Caption_1_in_8 = NULL;
+main_Caption_1_in_9 = NULL;
+main_Caption_1_out_1 = NULL;
+main_Sequencer_2_in_1 = "Sequencer_2";
+main_Sequencer_2_in_2 = NULL;
+main_Sequencer_2_in_3 = NULL;
+main_Sequencer_2_in_4 = NULL;
+main_Sequencer_2_in_5 = NULL;
+main_Sequencer_2_in_6 = NULL;
+main_Sequencer_2_in_7 = { 2675 4000 5 2675 4000 1 };
+main_Sequencer_2_out_1 = NULL;
+
+ at startframe = 2675;
+ at nextframe = @startframe;
+ at endframe = 4000;
+ at deltaframe = 5;
+main_Compute_4_in_1 = "$0*10";
+main_Compute_4_in_3 = NULL;
+main_Compute_4_out_1 = NULL;
+main_Compute_5_in_1 = "int(($0-1)*0.001875 - 0.25351533)";
+main_Compute_5_in_3 = NULL;
+main_Compute_5_out_1 = NULL;
+main_Compute_2_in_1 = "int( 60*(($0-1)*0.001875 - 0.25351533) - 60*$1)";
+main_Compute_2_out_1 = NULL;
+main_Format_3_in_1 = "Time = %3d min %2.2d s";
+main_Format_3_out_1 = NULL;
+main_Caption_2_in_2 = [.93 .08];
+main_Caption_2_in_3 = NULL;
+main_Caption_2_in_4 = NULL;
+main_Caption_2_in_5 = NULL;
+main_Caption_2_in_6 = 24;
+main_Caption_2_in_7 = "area";
+main_Caption_2_in_8 = NULL;
+main_Caption_2_in_9 = NULL;
+main_Caption_2_out_1 = NULL;
+main_Import_5_in_1 = "earth_main_cities.dx";
+main_Import_5_in_2 = NULL;
+main_Import_5_in_3 = "dx";
+main_Import_5_in_4 = NULL;
+main_Import_5_in_5 = NULL;
+main_Import_5_in_6 = NULL;
+main_Import_5_out_1 = NULL;
+main_Colormap_1_in_1 = { [0.037383178 0.98947368] [1.0 1.0] };
+main_Colormap_1_in_2 = { [0.0 0.73684211] [0.97196262 0.72631579] };
+main_Colormap_1_in_3 = { [0.0 1.0] [0.98130841 1.0] };
+main_Colormap_1_in_4 = { [0.0 1.0] [1.0 1.0] };
+main_Colormap_1_in_5 = "Colormap_1";
+main_Colormap_1_in_7 = NULL;
+main_Colormap_1_in_8 = NULL;
+main_Colormap_1_in_9 = NULL;
+main_Colormap_1_in_10 = NULL;
+main_Colormap_1_in_11 = NULL;
+main_Colormap_1_in_12 = { 1.0 1.0 };
+main_Colormap_1_in_13 = NULL;
+main_Colormap_1_in_14 = NULL;
+main_Colormap_1_in_15 = NULL;
+main_Colormap_1_in_16 = NULL;
+main_Colormap_1_in_17 = 1.0;
+main_Colormap_1_in_18 = 1.0;
+main_Colormap_1_in_19 = NULL;
+main_Colormap_1_out_1 = NULL;
+main_Color_1_in_3 = NULL;
+main_Color_1_in_4 = NULL;
+main_Color_1_in_5 = NULL;
+main_Color_1_out_1 = NULL;
+main_ShowPositions_1_in_2 = NULL;
+main_ShowPositions_1_out_1 = NULL;
+main_Scalar_1_in_1 = "Scalar_1";
+main_Scalar_1_in_2 = NULL;
+main_Scalar_1_in_3 = 0.012 ;
+main_Scalar_1_in_4 = NULL;
+main_Scalar_1_in_5 = NULL;
+main_Scalar_1_in_6 = NULL;
+main_Scalar_1_in_7 = NULL;
+main_Scalar_1_in_8 = NULL;
+main_Scalar_1_in_9 = NULL;
+main_Scalar_1_in_10 = NULL;
+main_Scalar_1_in_11 = NULL;
+main_Scalar_1_out_1 = 0.012 ;
+main_Glyph_1_in_2 = NULL;
+main_Glyph_1_in_3 = NULL;
+main_Glyph_1_in_5 = NULL;
+main_Glyph_1_in_6 = NULL;
+main_Glyph_1_in_7 = NULL;
+main_Glyph_1_out_1 = NULL;
+main_Import_9_in_1 = "epicenter.dx";
+main_Import_9_in_2 = NULL;
+main_Import_9_in_3 = "dx";
+main_Import_9_in_4 = NULL;
+main_Import_9_in_5 = NULL;
+main_Import_9_in_6 = NULL;
+main_Import_9_out_1 = NULL;
+main_Color_5_in_2 = "cyan";
+main_Color_5_in_3 = NULL;
+main_Color_5_in_4 = NULL;
+main_Color_5_in_5 = NULL;
+main_Color_5_out_1 = NULL;
+main_ShowPositions_2_in_2 = NULL;
+main_ShowPositions_2_out_1 = NULL;
+main_Scalar_2_in_1 = "Scalar_2";
+main_Scalar_2_in_2 = NULL;
+main_Scalar_2_in_3 = 0.016 ;
+main_Scalar_2_in_4 = NULL;
+main_Scalar_2_in_5 = NULL;
+main_Scalar_2_in_6 = NULL;
+main_Scalar_2_in_7 = NULL;
+main_Scalar_2_in_8 = NULL;
+main_Scalar_2_in_9 = NULL;
+main_Scalar_2_in_10 = NULL;
+main_Scalar_2_in_11 = NULL;
+main_Scalar_2_out_1 = 0.016 ;
+main_Glyph_2_in_2 = "diamond";
+main_Glyph_2_in_3 = NULL;
+main_Glyph_2_in_5 = NULL;
+main_Glyph_2_in_6 = NULL;
+main_Glyph_2_in_7 = NULL;
+main_Glyph_2_out_1 = NULL;
+main_Collect_2_in_3 = NULL;
+main_Collect_2_in_4 = NULL;
+main_Collect_2_out_1 = NULL;
+main_Import_2_in_1 = "earth_topo_bathy.dx";
+main_Import_2_in_2 = NULL;
+main_Import_2_in_3 = "dx";
+main_Import_2_in_4 = NULL;
+main_Import_2_in_5 = NULL;
+main_Import_2_in_6 = NULL;
+main_Import_2_out_1 = NULL;
+main_Import_6_in_1 = "GMT_globe_palette_opaque.cm";
+main_Import_6_in_2 = NULL;
+main_Import_6_in_3 = "cm";
+main_Import_6_in_4 = NULL;
+main_Import_6_in_5 = NULL;
+main_Import_6_in_6 = NULL;
+main_Import_6_out_1 = NULL;
+main_Import_10_in_1 = "GMT_globe_palette_transparent.cm";
+main_Import_10_in_2 = NULL;
+main_Import_10_in_3 = "cm";
+main_Import_10_in_4 = NULL;
+main_Import_10_in_5 = NULL;
+main_Import_10_in_6 = NULL;
+main_Import_10_out_1 = NULL;
+main_Collect_4_out_1 = NULL;
+main_Select_1_in_2 = 0;
+main_Select_1_in_3 = NULL;
+main_Select_1_out_1 = NULL;
+main_Colormap_5_in_1 = {[0 0.76666671 ] [0.071086608 0.75 ] [0.08559408 0.73076928 ] [0.1073553 0.70833331 ] [0.1363702 0.68181819 ] [0.15813141 0.65151513 ] [0.17263889 0.625 ] [0.1944001 0.6025641 ] [0.2306688 0.58333331 ] [0.26693749 0.56666672 ] [0.30320609 0.56652051 ] [0.3394748 0.56633502 ] [0.37574351 0.5660919 ] [0.41201219 0.5657596 ] [0.4482809 0.56473827 ] [0.48454961 0.56382978 ] [0.52081817 0.56218898 ] [0.55708688 0.55833328 ] [0.57884812 0.53571433 ] [0.5789932 0.53571433 ] [0.59328312 0.53571433 ] [0.5933556 0.25 ] [0.59342808 0.25 ] [0.60046422 0.3888889 ] [0.6006093 0.3888889 ] [0.60786313 0.25 ] [0.62962419 0.083333336 ] [0.66589302 0.1022013 ] [0.70216161 0.1126761 ] [0.73843032 0.1189139 ] [0.77469897 0.149635 ] [0.81096762 0.1426858 ] [0.84723628 0.13403261 ] [0.88350499 0.1255708 ] [0.9197737 0.1185682 ] [0.95604229 0.1111111 ] [0.99231112 0 ] [1 0 ] };
+main_Colormap_5_in_2 = {[0 1 ] [0.071086608 0.93333328 ] [0.08559408 0.86666667 ] [0.1073553 0.80000001 ] [0.1363702 0.73333329 ] [0.15813141 0.73333329 ] [0.17263889 0.80000001 ] [0.1944001 0.86666667 ] [0.2306688 0.93333328 ] [0.26693749 1 ] [0.30320609 0.89411771 ] [0.3394748 0.78823531 ] [0.37574351 0.6823529 ] [0.41201219 0.57647061 ] [0.4482809 0.47450981 ] [0.48454961 0.3686274 ] [0.52081817 0.26274511 ] [0.55708688 0.15686271 ] [0.57884812 0.054901958 ] [0.5789932 0.054901958 ] [0.59328312 0.054901958 ] [0.5933556 1 ] [0.59342808 1 ] [0.60046422 0.75 ] [0.6006093 0.75 ] [0.60786313 0.35964909 ] [0.62962419 0.27450979 ] [0.66589302 0.436214 ] [0.70216161 0.61739129 ] [0.73843032 0.8202765 ] [0.77469897 0.81547618 ] [0.81096762 0.847561 ] [0.84723628 0.88271612 ] [0.88350499 0.918239 ] [0.9197737 0.95512819 ] [0.95604229 1 ] [0.99231112 0.45061731 ] [1 0.33707869 ] };
+main_Colormap_5_in_3 = {[0 1 ] [0.071086608 1 ] [0.08559408 1 ] [0.1073553 1 ] [0.1363702 1 ] [0.15813141 1 ] [0.17263889 1 ] [0.1944001 1 ] [0.2306688 1 ] [0.26693749 1 ] [0.30320609 1 ] [0.3394748 1 ] [0.37574351 1 ] [0.41201219 1 ] [0.4482809 1 ] [0.48454961 1 ] [0.52081817 1 ] [0.55708688 1 ] [0.57884812 1 ] [0.5789932 1 ] [0.59328312 1 ] [0.5933556 0.40000001 ] [0.59342808 0.40000001 ] [0.60046422 0.80000001 ] [0.6006093 0.80000001 ] [0.60786313 0.89411771 ] [0.62962419 1 ] [0.66589302 0.95294118 ] [0.70216161 0.90196079 ] [0.73843032 0.8509804 ] [0.77469897 0.65882349 ] [0.81096762 0.64313728 ] [0.84723628 0.63529408 ] [0.88350499 0.62352937 ] [0.9197737 0.61176473 ] [0.95604229 0.60000002 ] [0.99231112 0.63529408 ] [1 0.69803917 ] };
+main_Colormap_5_in_4 = {[0 1 ] [1 1 ] };
+main_Colormap_5_in_5 = "Colormap_5";
+main_Colormap_5_in_6 = NULL;
+main_Colormap_5_in_7 = -8180.0;
+main_Colormap_5_in_8 = 5606.0;
+main_Colormap_5_in_9 = NULL;
+main_Colormap_5_in_12 = { -8180.0 5606.0 };
+main_Colormap_5_in_13 = {[0 0.76666671 ] [0.071086608 0.75 ] [0.08559408 0.73076928 ] [0.1073553 0.70833331 ] [0.1363702 0.68181819 ] [0.15813141 0.65151513 ] [0.17263889 0.625 ] [0.1944001 0.6025641 ] [0.2306688 0.58333331 ] [0.26693749 0.56666672 ] [0.30320609 0.56652051 ] [0.3394748 0.56633502 ] [0.37574351 0.5660919 ] [0.41201219 0.5657596 ] [0.4482809 0.56473827 ] [0.48454961 0.56382978 ] [0.52081817 0.56218898 ] [0.55708688 0.55833328 ] [0.57884812 0.53571433 ] [0.5789932 0.53571433 ] [0.59328312 0.53571433 ] [0.5933556 0.25 ] [0.59342808 0.25 ] [0.60046422 0.3888889 ] [0.6006093 0.3888889 ] [0.60786313 0.25 ] [0.62962419 0.083333336 ] [0.66589302 0.1022013 ] [0.70216161 0.1126761 ] [0.73843032 0.1189139 ] [0.77469897 0.149635 ] [0.81096762 0.1426858 ] [0.84723628 0.13403261 ] [0.88350499 0.1255708 ] [0.9197737 0.1185682 ] [0.95604229 0.1111111 ] [0.99231112 0 ] [1 0 ] };
+main_Colormap_5_in_14 = {[0 1 ] [0.071086608 0.93333328 ] [0.08559408 0.86666667 ] [0.1073553 0.80000001 ] [0.1363702 0.73333329 ] [0.15813141 0.73333329 ] [0.17263889 0.80000001 ] [0.1944001 0.86666667 ] [0.2306688 0.93333328 ] [0.26693749 1 ] [0.30320609 0.89411771 ] [0.3394748 0.78823531 ] [0.37574351 0.6823529 ] [0.41201219 0.57647061 ] [0.4482809 0.47450981 ] [0.48454961 0.3686274 ] [0.52081817 0.26274511 ] [0.55708688 0.15686271 ] [0.57884812 0.054901958 ] [0.5789932 0.054901958 ] [0.59328312 0.054901958 ] [0.5933556 1 ] [0.59342808 1 ] [0.60046422 0.75 ] [0.6006093 0.75 ] [0.60786313 0.35964909 ] [0.62962419 0.27450979 ] [0.66589302 0.436214 ] [0.70216161 0.61739129 ] [0.73843032 0.8202765 ] [0.77469897 0.81547618 ] [0.81096762 0.847561 ] [0.84723628 0.88271612 ] [0.88350499 0.918239 ] [0.9197737 0.95512819 ] [0.95604229 1 ] [0.99231112 0.45061731 ] [1 0.33707869 ] };
+main_Colormap_5_in_15 = {[0 1 ] [0.071086608 1 ] [0.08559408 1 ] [0.1073553 1 ] [0.1363702 1 ] [0.15813141 1 ] [0.17263889 1 ] [0.1944001 1 ] [0.2306688 1 ] [0.26693749 1 ] [0.30320609 1 ] [0.3394748 1 ] [0.37574351 1 ] [0.41201219 1 ] [0.4482809 1 ] [0.48454961 1 ] [0.52081817 1 ] [0.55708688 1 ] [0.57884812 1 ] [0.5789932 1 ] [0.59328312 1 ] [0.5933556 0.40000001 ] [0.59342808 0.40000001 ] [0.60046422 0.80000001 ] [0.6006093 0.80000001 ] [0.60786313 0.89411771 ] [0.62962419 1 ] [0.66589302 0.95294118 ] [0.70216161 0.90196079 ] [0.73843032 0.8509804 ] [0.77469897 0.65882349 ] [0.81096762 0.64313728 ] [0.84723628 0.63529408 ] [0.88350499 0.62352937 ] [0.9197737 0.61176473 ] [0.95604229 0.60000002 ] [0.99231112 0.63529408 ] [1 0.69803917 ] };
+main_Colormap_5_in_16 = {[0 1 ] [1 1 ] };
+main_Colormap_5_in_17 = -8180.0;
+main_Colormap_5_in_18 = 5606.0;
+main_Colormap_5_in_19 = NULL;
+main_Colormap_5_out_1 = NULL;
+main_Colormap_5_out_2 = NULL;
+main_Color_2_in_4 = NULL;
+main_Color_2_in_5 = NULL;
+main_Color_2_out_1 = NULL;
+main_Format_4_in_1 = "/media/disk320GB/DX_movie_%6.6d.dx";
+main_Format_4_in_3 = NULL;
+main_Format_4_out_1 = NULL;
+main_Import_7_in_2 = NULL;
+main_Import_7_in_3 = "dx";
+main_Import_7_in_4 = NULL;
+main_Import_7_in_5 = NULL;
+main_Import_7_in_6 = NULL;
+main_Import_7_out_1 = NULL;
+main_Import_8_in_1 = "red_blue_waves.cm";
+main_Import_8_in_2 = NULL;
+main_Import_8_in_3 = "cm";
+main_Import_8_in_4 = NULL;
+main_Import_8_in_5 = NULL;
+main_Import_8_in_6 = NULL;
+main_Import_8_out_1 = NULL;
+main_Colormap_6_in_1 = {[0 0.70731705 ] [0.49450549 0.51219511 ] [0.49450549 1 ] [0.99267399 1 ] };
+main_Colormap_6_in_2 = {[0.058608059 1 ] [0.50183147 1 ] [0.51648355 1 ] [1 1 ] };
+main_Colormap_6_in_3 = {[0 1 ] [0.49450549 0.5 ] [1 1 ] };
+main_Colormap_6_in_4 = {[0 1 ] [1 1 ] };
+main_Colormap_6_in_5 = "Colormap_6";
+main_Colormap_6_in_7 = NULL;
+main_Colormap_6_in_8 = NULL;
+main_Colormap_6_in_9 = NULL;
+main_Colormap_6_in_12 = { -1.0 0.99000001 };
+main_Colormap_6_in_13 = {[0 0.70731705 ] [0.49450549 0.51219511 ] [0.49450549 1 ] [0.99267399 1 ] };
+main_Colormap_6_in_14 = {[0.058608059 1 ] [0.50183147 1 ] [0.51648355 1 ] [1 1 ] };
+main_Colormap_6_in_15 = {[0 1 ] [0.49450549 0.5 ] [1 1 ] };
+main_Colormap_6_in_16 = {[0 1 ] [1 1 ] };
+main_Colormap_6_in_17 = -1.0;
+main_Colormap_6_in_18 = 0.99000001;
+main_Colormap_6_in_19 = NULL;
+main_Colormap_6_out_1 = NULL;
+main_Colormap_6_out_2 = NULL;
+main_Color_3_in_4 = NULL;
+main_Color_3_in_5 = NULL;
+main_Color_3_out_1 = NULL;
+main_Import_4_in_1 = "DX_continent_boundaries.dx";
+main_Import_4_in_2 = NULL;
+main_Import_4_in_3 = "dx";
+main_Import_4_in_4 = NULL;
+main_Import_4_in_5 = NULL;
+main_Import_4_in_6 = NULL;
+main_Import_4_out_1 = NULL;
+main_Color_4_in_2 = "orange";
+main_Color_4_in_3 = NULL;
+main_Color_4_in_4 = NULL;
+main_Color_4_in_5 = NULL;
+main_Color_4_out_1 = NULL;
+main_Options_2_in_2 = "rendering mode";
+main_Options_2_in_3 = "hardware";
+main_Options_2_in_4 = "line width";
+main_Options_2_in_5 = 1.5;
+main_Options_2_out_1 = NULL;
+main_Collect_1_out_1 = NULL;
+main_Compute_1_in_1 = "$0*85./14100.";
+main_Compute_1_in_3 = NULL;
+main_Compute_1_out_1 = NULL;
+main_Rotate_1_in_2 = "z";
+main_Rotate_1_in_4 = NULL;
+main_Rotate_1_in_5 = NULL;
+main_Rotate_1_in_6 = NULL;
+main_Rotate_1_in_7 = NULL;
+main_Rotate_1_out_1 = NULL;
+main_Collect_3_in_4 = NULL;
+main_Collect_3_out_1 = NULL;
+main_Compute_6_in_1 = "0";
+main_Compute_6_in_2 = NULL;
+main_Compute_6_in_3 = NULL;
+main_Format_2_in_1 = "imagemovie%6.6d.tiff";
+main_Format_2_in_3 = NULL;
+main_Format_2_out_1 = NULL;
+macro Image(
+ id,
+ object,
+ where,
+ useVector,
+ to,
+ from,
+ width,
+ resolution,
+ aspect,
+ up,
+ viewAngle,
+ perspective,
+ options,
+ buttonState = 1,
+ buttonUpApprox = "none",
+ buttonDownApprox = "none",
+ buttonUpDensity = 1,
+ buttonDownDensity = 1,
+ renderMode = 0,
+ defaultCamera,
+ reset,
+ backgroundColor,
+ throttle,
+ RECenable = 0,
+ RECfile,
+ RECformat,
+ RECresolution,
+ RECaspect,
+ AAenable = 0,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ interactionMode,
+ title,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels,
+ webOptions) -> (
+ object,
+ camera,
+ where)
+{
+ ImageMessage(
+ id,
+ backgroundColor,
+ throttle,
+ RECenable,
+ RECfile,
+ RECformat,
+ RECresolution,
+ RECaspect,
+ AAenable,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels,
+ interactionMode,
+ title,
+ renderMode,
+ buttonUpApprox,
+ buttonDownApprox,
+ buttonUpDensity,
+ buttonDownDensity) [instance: 1, cache: 1];
+ autoCamera =
+ AutoCamera(
+ object,
+ "front",
+ object,
+ resolution,
+ aspect,
+ [0,1,0],
+ perspective,
+ viewAngle,
+ backgroundColor) [instance: 1, cache: 1];
+ realCamera =
+ Camera(
+ to,
+ from,
+ width,
+ resolution,
+ aspect,
+ up,
+ perspective,
+ viewAngle,
+ backgroundColor) [instance: 1, cache: 1];
+ coloredDefaultCamera =
+ UpdateCamera(defaultCamera,
+ background=backgroundColor) [instance: 1, cache: 1];
+ nullDefaultCamera =
+ Inquire(defaultCamera,
+ "is null + 1") [instance: 1, cache: 1];
+ resetCamera =
+ Switch(
+ nullDefaultCamera,
+ coloredDefaultCamera,
+ autoCamera) [instance: 1, cache: 1];
+ resetNull =
+ Inquire(
+ reset,
+ "is null + 1") [instance: 2, cache: 1];
+ reset =
+ Switch(
+ resetNull,
+ reset,
+ 0) [instance: 2, cache: 1];
+ whichCamera =
+ Compute(
+ "($0 != 0 || $1 == 0) ? 1 : 2",
+ reset,
+ useVector) [instance: 1, cache: 1];
+ camera = Switch(
+ whichCamera,
+ resetCamera,
+ realCamera) [instance: 3, cache: 1];
+ AAobject =
+ AutoAxes(
+ object,
+ camera,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels) [instance: 1, cache: 1];
+ switchAAenable = Compute("$0+1",
+ AAenable) [instance: 2, cache: 1];
+ object = Switch(
+ switchAAenable,
+ object,
+ AAobject) [instance:4, cache: 1];
+ SWapproximation_options =
+ Switch(
+ buttonState,
+ buttonUpApprox,
+ buttonDownApprox) [instance: 5, cache: 1];
+ SWdensity_options =
+ Switch(
+ buttonState,
+ buttonUpDensity,
+ buttonDownDensity) [instance: 6, cache: 1];
+ HWapproximation_options =
+ Format(
+ "%s,%s",
+ buttonDownApprox,
+ buttonUpApprox) [instance: 1, cache: 1];
+ HWdensity_options =
+ Format(
+ "%d,%d",
+ buttonDownDensity,
+ buttonUpDensity) [instance: 2, cache: 1];
+ switchRenderMode = Compute(
+ "$0+1",
+ renderMode) [instance: 3, cache: 1];
+ approximation_options = Switch(
+ switchRenderMode,
+ SWapproximation_options,
+ HWapproximation_options) [instance: 7, cache: 1];
+ density_options = Switch(
+ switchRenderMode,
+ SWdensity_options,
+ HWdensity_options) [instance: 8, cache: 1];
+ renderModeString = Switch(
+ switchRenderMode,
+ "software",
+ "hardware")[instance: 9, cache: 1];
+ object_tag = Inquire(
+ object,
+ "object tag")[instance: 3, cache: 1];
+ annoted_object =
+ Options(
+ object,
+ "send boxes",
+ 0,
+ "cache",
+ 1,
+ "object tag",
+ object_tag,
+ "ddcamera",
+ whichCamera,
+ "rendering approximation",
+ approximation_options,
+ "render every",
+ density_options,
+ "button state",
+ buttonState,
+ "rendering mode",
+ renderModeString) [instance: 1, cache: 1];
+ RECresNull =
+ Inquire(
+ RECresolution,
+ "is null + 1") [instance: 4, cache: 1];
+ ImageResolution =
+ Inquire(
+ camera,
+ "camera resolution") [instance: 5, cache: 1];
+ RECresolution =
+ Switch(
+ RECresNull,
+ RECresolution,
+ ImageResolution) [instance: 10, cache: 1];
+ RECaspectNull =
+ Inquire(
+ RECaspect,
+ "is null + 1") [instance: 6, cache: 1];
+ ImageAspect =
+ Inquire(
+ camera,
+ "camera aspect") [instance: 7, cache: 1];
+ RECaspect =
+ Switch(
+ RECaspectNull,
+ RECaspect,
+ ImageAspect) [instance: 11, cache: 1];
+ switchRECenable = Compute(
+ "$0 == 0 ? 1 : (($2 == $3) && ($4 == $5)) ? ($1 == 1 ? 2 : 3) : 4",
+ RECenable,
+ switchRenderMode,
+ RECresolution,
+ ImageResolution,
+ RECaspect,
+ ImageAspect) [instance: 4, cache: 1];
+ NoRECobject, RECNoRerenderObject, RECNoRerHW, RECRerenderObject = Route(switchRECenable, annoted_object);
+ Display(
+ NoRECobject,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 1];
+ image =
+ Render(
+ RECNoRerenderObject,
+ camera) [instance: 1, cache: 1];
+ Display(
+ image,
+ NULL,
+ where,
+ throttle) [instance: 2, cache: 1];
+ WriteImage(
+ image,
+ RECfile,
+ RECformat) [instance: 1, cache: 1];
+ rec_where = Display(
+ RECNoRerHW,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 0];
+ rec_image = ReadImageWindow(
+ rec_where) [instance: 1, cache: 1];
+ WriteImage(
+ rec_image,
+ RECfile,
+ RECformat) [instance: 1, cache: 1];
+ RECupdateCamera =
+ UpdateCamera(
+ camera,
+ resolution=RECresolution,
+ aspect=RECaspect) [instance: 2, cache: 1];
+ Display(
+ RECRerenderObject,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 1];
+ RECRerenderObject =
+ ScaleScreen(
+ RECRerenderObject,
+ NULL,
+ RECresolution,
+ camera) [instance: 1, cache: 1];
+ image =
+ Render(
+ RECRerenderObject,
+ RECupdateCamera) [instance: 2, cache: 1];
+ WriteImage(
+ image,
+ RECfile,
+ RECformat) [instance: 2, cache: 1];
+}
+main_Image_4_in_1 = "Image_4";
+main_Image_4_in_3 = "X24,,";
+main_Image_4_in_4 = 1;
+main_Image_4_in_5 = [-0.0283461 -0.0321944 0.0649886];
+main_Image_4_in_6 = [-1.8296 8.29494 3.80668];
+main_Image_4_in_7 = NULL;
+main_Image_4_in_8 = 1097;
+main_Image_4_in_9 = 0.572926;
+main_Image_4_in_10 = [-0.0697647 -0.42138 0.904197];
+main_Image_4_in_11 = 23.6948;
+main_Image_4_in_12 = 1;
+main_Image_4_in_13 = NULL;
+main_Image_4_in_14 = 1;
+main_Image_4_in_15 = NULL;
+main_Image_4_in_16 = NULL;
+main_Image_4_in_17 = 1;
+main_Image_4_in_18 = 1;
+main_Image_4_in_19 = 1;
+main_Image_4_in_20 = NULL;
+main_Image_4_in_21 = NULL;
+main_Image_4_in_22 = NULL;
+main_Image_4_in_23 = NULL;
+main_Image_4_in_25 = "/home/komatits/movies_poster_rapport_CINES/initial_image_earth.tiff";
+main_Image_4_in_26 = "tiff gamma=1";
+main_Image_4_in_27 = NULL;
+main_Image_4_in_28 = NULL;
+main_Image_4_in_29 = NULL;
+main_Image_4_in_30 = NULL;
+main_Image_4_in_31 = NULL;
+main_Image_4_in_32 = NULL;
+main_Image_4_in_33 = NULL;
+main_Image_4_in_34 = NULL;
+main_Image_4_in_35 = NULL;
+main_Image_4_in_36 = NULL;
+main_Image_4_in_37 = NULL;
+main_Image_4_in_38 = NULL;
+main_Image_4_in_39 = NULL;
+main_Image_4_in_40 = NULL;
+main_Image_4_in_41 = "panzoom";
+main_Image_4_in_42 = NULL;
+main_Image_4_in_43 = NULL;
+main_Image_4_in_44 = NULL;
+main_Image_4_in_45 = NULL;
+main_Image_4_in_46 = NULL;
+main_Image_4_in_47 = NULL;
+main_Image_4_in_48 = NULL;
+main_Image_4_in_49 = NULL;
+main_Image_4_out_2 = NULL;
+main_Render_2_in_3 = NULL;
+main_Render_2_out_1 = NULL;
+main_WriteImage_2_in_3 = "tiff gamma=1";
+main_WriteImage_2_in_4 = NULL;
+Executive("product version 4 4 4");
+$sync
+
+sequence main();
+play;
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/ori_GMT_globe_palette.dat
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/ori_GMT_globe_palette.dat (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/ori_GMT_globe_palette.dat 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,43 @@
+-10000 153 0 255
+-9500 153 0 255
+-9000 153 0 255
+-8500 136 17 255
+-8000 119 34 255
+-7500 102 51 255
+-7000 85 68 255
+-6500 68 85 255
+-6000 51 102 255
+-5500 34 119 255
+-5000 17 136 255
+-4500 0 153 255
+-4000 27 164 255
+-3500 54 175 255
+-3000 81 186 255
+-2500 108 197 255
+-2000 134 208 255
+-1500 161 219 255
+-1000 188 230 255
+-500 215 241 255
+-200 241 252 255
+0 51 102 0
+100 51 204 102
+200 187 228 146
+500 255 220 185
+1000 243 202 137
+1500 230 184 88
+2000 217 166 39
+2500 168 154 31
+3000 164 144 25
+3500 162 134 19
+4000 159 123 13
+4500 156 113 7
+5000 153 102 0
+5500 162 89 89
+6000 178 118 118
+6500 183 147 147
+7000 194 176 176
+7500 204 204 204
+8000 229 229 229
+8500 242 242 242
+9000 255 255 255
+9500 255 255 255
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/ori_lat_long_main_cities_Web.dat
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/ori_lat_long_main_cities_Web.dat (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/ori_lat_long_main_cities_Web.dat 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,473 @@
+33 55 48 118 24 0 LosAngeles,CA
+37 45 0 122 40 48 SanFrancisco,CA
+39 45 0 104 52 12 Denver,CO
+VANCOUVER, BC, CANADA 49 16 N 123 07 W
+
+ AFGHANISTAN
+ Kabul 34° 35' N 69° 12' E
+
+ ALGERIA
+ Algiers 36° 46' N 30° 3' E
+
+ ARGENTINA
+ Buenos Aires 34° 35' S 58° 29' W
+ Cordoba 31° 22' S 64° 15' W
+ Tucuman 26° 50' S 65° 10' W
+
+ AUSTRALIA
+ Adelaide 34° 56' S 138° 35' E
+ Alice Springs 23° 48' S 133° 53' E
+ Brisbane 27° 28' S 153° 2' E
+ Darwin 12° 28' S 130° 51' E
+ Melbourne 37° 49' S 144° 58' E
+ Perth 31° 57' S 115° 51' E
+ Sydney 33° 52' S 151° 12' E
+
+ AUSTRIA
+ Vienna 48° 15' N 16° 22' E
+
+ AZORES
+ Lajes (Terceira) 38° 45' N 27° 5' W
+
+ BAHAMAS
+ Nassau 25° 5' N 77° 21' W
+
+ BANGLADESH
+ Chittagong 22° 21' N 91° 50' E
+
+ BELGIUM
+ Brussels 50° 48' N 4° 21' E
+
+ BELIZE
+ Belize 17° 31' N 88° 11' W
+
+ BERMUDA
+ Kindley AFB 33° 22' N 64° 41' W
+
+ BHUTAN
+ Thimbu 27° 32' N 89° 43' E
+
+ BOLIVIA
+ La Paz 16° 30' S 68° 9' W
+ Sucre 19° 02' S 65° 17' W
+
+ BRAZIL
+ Belem 1° 27' S 48° 29' W
+ Belo Horizonte 19° 56' S 43° 57' W
+ Brasilia 15° 52' S 47° 55' W
+ Curitiba 25° 25' S 49° 17' W
+ Fortaleza 3° 46' S 38° 33' W
+ Porto Alegre 30° 2' S 51° 13' W
+ Recife 8° 4' S 34° 53' W
+ Rio De Janeiro 22° 55' S 43° 12' W
+ Salvador 13° 0' S 38° 30' W
+ Sao Paulo 23° 33' S 46° 38' W
+
+ BULGARIA
+ Sofia 42° 42' N 23° 20' E
+
+ BURKINA FASO
+ Ouagadougou 12° 22' N 1° 31' W
+
+ CAMBODIA
+ Phnom Penh 11° 33' N 104° 51' E
+
+ CAMEROON
+ Yaounde 3° 52' N 11° 31' E
+
+ CANADA
+ Ottawa 45° 19' N 75° 40' W
+
+ CHAD
+ N'Djamena 12° 07' S 15° 03' E
+
+ CHILE
+ Punta Arenas 53° 10' S 70° 54' W
+ Santiago 33° 27' S 70° 42' W
+ Valparaiso 33° 1' S 71° 38' W
+
+ CHINA
+ Beijing 39° 55' N 116° 26' E
+ Shanghai 31° 12' N 121° 26' E
+
+ COLOMBIA
+ Baranquilla 10° 59' N 74° 48' W
+ Bogota 4° 36' N 74° 5' W
+ Cali 3° 25' N 76° 30' W
+ Medellin 6° 13' N 75° 36' W
+
+ CONGO
+ Brazzaville 4° 15' S 15° 15' E
+
+ CUBA
+ Guantanamo Bay 19° 54' N 75° 9' W
+ Havana 23° 8' N 82° 21' W
+
+ CZECH REPUBLIC
+ Prague 50° 5' N 14° 25' E
+
+ DENMARK
+ Copenhagen 55° 41' N 12° 33' E
+
+ DOMINICAN REPUBLIC
+ Santo Domingo 18° 29' N 69° 54' W
+
+ EQUADOR
+ Guayaquil 21° 0' S 79° 53' W
+ Quito 0° 13' S 78° 32' W
+
+ EGYPT
+ Cairo 29° 52' N 31° 20' E
+
+ EL SALVADOR
+ San Salvador 13° 42' N 89° 13' W
+
+ ETHIOPIA
+ Addis Ababa 90° 2' N 38° 45' E
+ Asmara 15° 17' N 38° 55' E
+
+ FINLAND
+ Helsinki 60° 10' N 24° 57' E
+
+ FRANCE
+ Lyon 45° 42' N 4° 47' E
+ Marseilles 43° 18' N 5° 23' E
+ Nantes 47° 15' N 1° 34' W
+ Nice 43° 42' N 7° 16' E
+ Paris 48° 49' N 2° 29' E
+ Strasbourg 48° 35' N 7° 46' E
+
+ FRENCH GUIANA
+ Cayenne 4° 56' N 52° 27' W
+
+ GERMANY
+ Berlin 52° 27' N 13° 18' E
+ Hamburg 53° 33' N 9° 58' E
+ Hannover 52° 24' N 9° 40' E
+ Mannheim 49° 34' N 8° 28' E
+ Munich 48° 9' N 11° 34' E
+
+ GHANA
+ Accra 5° 33' N 0° 12' W
+
+ GIBRALTAR
+ Gibraltar 36° 9' N 5° 22' W
+
+ GREECE
+ Athens 37° 58' N 23° 43' E
+ Thessaloniki 40° 37' N 22° 57' E
+
+ GREENLAND
+ Narsarssuaq 61° 11' N 45° 25' W
+
+ GUATEMALA
+ Guatemala City 14° 37' N 90° 31' W
+
+ GUYANA
+ Georgetown 6° 50' N 58° 12' W
+
+ HAITI
+ Port Au Prince 18° 33' N 72° 20' W
+
+ HONDURAS
+ Tegucigalpa 14° 6' N 87° 13' W
+
+ HONG KONG
+ Hong Kong 22° 18' N 114° 10' E
+
+ HUNGARY
+ Budapest 47° 31' N 19° 2' E
+
+ ICELAND
+ Reykjavik 64° 8' N 21° 56' E
+
+ INDIA
+ Ahmenabad 23° 2' N 72° 35' E
+ Bangalore 12° 57' N 77° 37' E
+ Bombay 18° 54' N 72° 49' E
+ Calcutta 22° 32' N 88° 20' E
+ Madras 13° 4' N 80° 15' E
+ Nagpur 21° 9' N 79° 7' E
+ New Delhi 28° 35' N 77° 12' E
+
+ INDONESIA
+ Djakarta 6° 11' S 106° 50' E
+ Kupang 10° 10' S 123° 34' E
+ Makassar 5° 8' S 119° 28' E
+ Medan 3° 35' N 98° 41' E
+ Palembang 3° 0' S 104° 46' E
+ Surabaya 7° 13' S 112° 43' E
+
+ IRAN
+ Abadan 30° 21' N 48° 16' E
+ Meshed 36° 17' N 59° 36' E
+ Tehran 35° 41' N 51° 25' E
+
+ IRAQ
+ Baghdad 33° 20' N 44° 24' E
+ Mosul 36° 19' N 43° 9' E
+
+ IRELAND
+ Dublin 53° 22' N 6° 21' W
+ Shannon 52° 41' N 8° 55' W
+
+ IRIAN BARAT
+ Manokwari 0° 52' S 134° 5' E
+
+ ISRAEL
+ Jerusalem 31° 47' N 35° 13' E
+ Tel Aviv 32° 6' N 34° 47' E
+
+ ITALY
+ Milan 45° 27' N 9° 17' E
+ Naples 40° 53' N 14° 18' E
+ Rome 41° 48' N 12° 36' E
+
+ IVORY COAST
+ Abidjan 5° 19' N 4° 1' W
+
+ JAPAN
+ Fukuoka 33° 35' N 130° 27' E
+ Sapporo 43° 4' N 141° 21' E
+ Tokyo 35° 41' N 139° 46' E
+
+ JORDAN
+ Amman 31° 57' N 35° 57' E
+
+ KENYA
+ Nairobi 1° 16' S 36° 48' E
+
+ KOREA
+ Pyongyang 39° 2' N 125° 41' E
+ Seoul 37° 34' N 126° 58' E
+
+ KUWAIT
+ Kuwait City 29° 20' N 47° 59' E
+
+ LATVIA
+ Riga 56° 57' N 24° 06' E
+
+ LEBANON
+ Beirut 33° 54' N 35° 28' E
+
+ LIBERIA
+ Monrovia 6° 18' N 10° 48' W
+
+ LIBYA
+ Benghazi 32° 6' N 20° 4' E
+ Tripoli 32° 54' N 13° 11' E
+
+ MADAGASCAR
+ Tananarive 18° 55' S 47° 33' E
+
+ MALAYSIA
+ Kuala Lumpur 3° 7' N 101° 42' E
+ Penang 5° 25' N 100° 19' E
+
+ MARTINIQUE
+ Fort De France 14° 37' N 61° 5' W
+
+ MEXICO
+ Guadalajara 20° 41' N 103° 20' W
+ Merida 20° 58' N 89° 38' W
+ Mexico City 19° 24' N 99° 12' W
+ Monterrey 25° 40' N 100° 18' W
+ Vera Cruz 19° 12' N 96° 8' W
+
+ MONGOLIA
+ Ulaanbaatar 47° 55' N 106° 53' E
+
+ MOROCCO
+ Casablanca 33° 35' N 7° 39' W
+
+ MYANMAR (BURMA)
+ Mandalay 21° 59' N 96° 6' E
+ Yangon (Rangoon) 16° 47' N 96° 9' E
+
+ MAURITANIA
+ Nouakchott 18° 06' N 15° 57' W
+
+ NEPAL
+ Kathmandu 27° 42' N 85° 12' E
+
+ NETHERLANDS
+ Amsterdam 52° 23' N 4° 55' E
+
+ NEW ZEALAND
+ Auckland 36° 51' S 174° 46' E
+ Christchurch 43° 32' S 172° 37' E
+ Wellington 41° 17' S 174° 46' E
+
+ NICARAGUA
+ Managua 12° 10' N 86° 15' W
+
+ NIGERIA
+ Lagos 6° 27' N 3° 24' E
+
+ NORWAY
+ Bergen 60° 24' N 5° 19' E
+ Oslo 59° 56' N 10° 44' E
+
+ PAKISTAN
+ Islamabad 33° 42' N 73° 10' E
+ Karachi 24° 48' N 66° 59' E
+ Lahore 31° 35' N 74° 20' E
+ Peshewar 34° 1' N 71° 35' E
+
+ PANAMA
+ Panama City 8° 58' N 79° 33' W
+
+ PAPUA NEW GUINEA
+ Port Moresby 9° 29' S 147° 9' E
+
+ PARAGUAY
+ Ascuncion 25° 17' S 57° 30' W
+
+ PERU
+ Lima 12° 5' S 77° 3' W
+
+ PHILIPPINES
+ Manila 14° 35' N 120° 59' E
+
+ POLAND
+ Krakow 50° 4' N 19° 57' E
+ Warsaw 52° 13' N 21° 2' E
+
+ PORTUGAL
+ Lisbon 38° 43' N 9° 8' W
+
+ PUERTO RICO
+ San Juan 18° 29' N 66° 7' W
+
+ ROMANIA
+ Bucharest 44° 25' N 26° 6' E
+
+ RUSSIA
+ Alma Ata 43° 14' N 76° 53' E
+ Archangel 64° 33' N 40° 32' E
+ Kaliningrad 54° 43' N 20° 30' E
+ Krasnoyarsk 56° 1' N 92° 57' E
+ Kiev 50° 27' N 30° 30' E
+ Kharkov 50° 0' N 36° 14' E
+ Kuibyshev 53° 11' N 50° 6' E
+ Minsk 53° 54' N 27° 33' E
+ Moscow 55° 46' N 37° 40' E
+ Odessa 46° 29' N 30° 44' E
+ Petropavlovsk 52° 53' N 158° 42' E
+ Rostov on Don 47° 13' N 39° 43' E
+ Sverdlovsk 56° 49' N 60° 38' E
+ St. Petersburg 59° 56' N 30° 16' E
+ Tashkent 41° 20' N 69° 18' E
+ Tbilisi 41° 43' N 44° 48' E
+ Vladivostok 43° 7' N 131° 55' E
+ Volgograd 48° 42' N 44° 31' E
+
+ SAUDI ARABIA
+ Dhahran 26° 17' N 50° 9' E
+ Jedda 21° 28' N 39° 10' E
+ Riyadh 24° 39' N 46° 42' E
+
+ SENEGAL
+ Dakar 14° 42' N 17° 29' W
+
+ SIERRA LEONE
+ Freetown 8° 30' N 13° 15' W
+
+ SINGAPORE
+ Singapore 1° 18' N 103° 50' E
+
+ SOMALIA
+ Mogadishu 2° 2' N 49° 19' E
+
+ SOUTH AFRICA
+ Cape Town 33° 56' S 18° 29' E
+ Johannesburg 26° 11' S 28° 3' E
+ Pretoria 25° 45' S 28° 14' E
+
+ SPAIN
+ Barcelona 41° 24' N 2° 9' E
+ Madrid 40° 25' N 3° 41' W
+ Valencia 39° 28' N 0° 23' W
+
+ SRI LANKA
+ Colombo 6° 54' N 79° 52' E
+
+ SUDAN
+ Khartoum 15° 37' N 32° 33' E
+
+ SURINAM
+ Paramaribo 5° 49' N 55° 9' W
+
+ SWEDEN
+ Stockholm 59° 21' N 18° 4' E
+
+ SWITZERLAND
+ Zurich 47° 23' N 8° 33' E
+
+ SYRIA
+ Damascus 33° 30' N 36° 20' E
+
+ TAIWAN
+ Tainan 22° 57' N 120° 12' E
+ Taipei 25° 2' N 121° 31' E
+
+ TANZANIA
+ Dar es Salaam 6° 50' S 39° 18' E
+
+ THAILAND
+ Bangkok 13° 44' N 100° 30' E
+
+ TONGA
+ Nukualofa 21° 08' S 175° 12' W
+
+ TRINIDAD
+ Port of Spain 10° 40' N 61° 31' W
+
+ TUNISIA
+ Tunis 36° 47' N 10° 12' E
+
+ TURKEY
+ Adana 36° 59' N 35° 18' E
+ Ankara 39° 57' N 32° 53' E
+ Istanbul 40° 58' N 28° 50' E
+ Izmir 38° 26' N 27° 10' E
+
+ UNITED KINGDOM
+ Belfast 54° 36' N 5° 55' W
+ Birmingham 52° 29' N 1° 56' W
+ Cardiff 51° 28' N 3° 10' W
+ Edinburgh 55° 55' N 3° 11' W
+ Glasgow 55° 52' N 4° 17' W
+ London 51° 29' N 0° 0' W
+
+ UNITED STATES
+ Washington D.C. 38° 51' N 77° 2' W
+
+ URUGUAY
+ Montevideo 34° 51' S 56° 13' W
+
+ VANUATU
+ Vila 17° 44' S 168° 19' E
+
+ VENEZUELA
+ Caracas 10° 30' N 66° 56' W
+ Maracaibo 10° 39' N 71° 36' W
+
+ VIETNAM
+ Da Nang 16° 4' N 108° 13' E
+ Hanoi 21° 2' N 105° 52' E
+ Ho Chi Minh City
+ (Saigon) 10° 47' N 106° 42' E
+
+ YEMEN
+ Aden 12° 50' N 45° 2' E
+
+ YUGOSLAVIA
+ Belgrade 44° 48' N 20° 28' E
+
+ ZAIRE
+ Kinshasa (Leopoldville) 4° 20' S 15° 18' E
+ Kisangani (Stanleyville) 0° 26' S 15° 14' E
+
+ ZIMBABWE
+ Harare 17° 50' S 31° 03' E
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/permute_cubit_2_opendx.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/permute_cubit_2_opendx.f90 (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/permute_cubit_2_opendx.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,53 @@
+!=====================================================================
+!
+! S p e c f e m 3 D G l o b e V e r s i o n 4 . 1
+! --------------------------------------------------
+!
+! Main authors: Dimitri Komatitsch and Jeroen Tromp
+! Seismological Laboratory, California Institute of Technology, USA
+! and University of Pau / CNRS / INRIA, France
+! (c) California Institute of Technology and University of Pau / CNRS / INRIA
+! August 2008
+!
+! This program is free software; you can redistribute it and/or modify
+! it under the terms of the GNU General Public License as published by
+! the Free Software Foundation; either version 2 of the License, or
+! (at your option) any later version.
+!
+! This program is distributed in the hope that it will be useful,
+! but WITHOUT ANY WARRANTY; without even the implied warranty of
+! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+! GNU General Public License for more details.
+!
+! You should have received a copy of the GNU General Public License along
+! with this program; if not, write to the Free Software Foundation, Inc.,
+! 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+!
+!=====================================================================
+
+! permute order of points in CUBIT elements (hexahedra) to display them in OpenDX
+
+ program permute_cubit_2_opendx
+
+ implicit none
+
+ integer iglob1,iglob2,iglob3,iglob4,iglob5,iglob6,iglob7,iglob8,ispec,nspec
+
+! number of elements in CUBIT mesh
+ nspec = 13
+
+ do ispec=1,nspec
+
+ read(*,*) iglob1,iglob2,iglob3,iglob4,iglob5,iglob6,iglob7,iglob8
+
+! write to AVS or DX global file with correct offset for hexahedra (3-D)
+! in the case of OpenDX, node numbers start at zero
+! in the case of AVS, node numbers start at one
+! point order in OpenDX is 4,1,8,5,3,2,7,6, *not* 1,2,3,4,5,6,7,8 as in AVS
+ write(*,"(i6,1x,i6,1x,i6,1x,i6,1x,i6,1x,i6,1x,i6,1x,i6)") &
+ iglob4-1,iglob1-1,iglob8-1,iglob5-1,iglob3-1,iglob2-1,iglob7-1,iglob6-1
+
+ enddo
+
+ end program permute_cubit_2_opendx
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/readme.txt
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/readme.txt (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/readme.txt 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,13 @@
+--------------------------------
+readme
+--------------------------------
+
+OpenDX, Open source visualization software package based on IBM's Visualization Data Explorer
+http://www.opendx.org/
+
+AVS, Advanced Visual Systems provides interactive data visualization software
+http://www.avs.com/
+
+
+
+- various files provided to create your visualizations
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/red_blue_waves.cm
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/red_blue_waves.cm (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/red_blue_waves.cm 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,19 @@
+-0.99
+1
+4
+0.00000000000000000000 0.70731706999999999219 0 0 0
+0.49450548999999999200 0.51219512000000000373 0 0 0
+0.49450548999999999200 1.00000000000000000000 0 0 0
+0.99267399000000000608 1.00000000000000000000 0 0 0
+4
+0.05860805899999999707 1.00000000000000000000 0 0 0
+0.50183149999999998592 1.00000000000000000000 0 0 0
+0.51648351999999997375 1.00000000000000000000 0 0 0
+1.00000000000000000000 1.00000000000000000000 0 0 0
+3
+0.00000000000000000000 1.00000000000000000000 0 0 0
+0.49450548999999999200 0.50000000000000000000 0 0 0
+1.00000000000000000000 1.00000000000000000000 0 0 0
+2
+0.00000000000000000000 1.00000000000000000000 0 0 0
+1.00000000000000000000 1.00000000000000000000 0 0 0
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/shrink_elements_OpenDX_mesh.pl
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/shrink_elements_OpenDX_mesh.pl (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/shrink_elements_OpenDX_mesh.pl 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,143 @@
+#! /usr/bin/perl
+
+# shrink elements in an existing OpenDX mesh file to make it easier
+# to visualize them
+
+# David Michea, University of Pau, France, January 2007
+
+use Data::Dumper;
+
+if (scalar(@ARGV) < 2)
+{ print "usage : $0 file2split.dx filesplit.dx [spacing ratio (try 1)]\n";
+ exit;
+}
+$filein = $ARGV[0];
+$fileout = $ARGV[1];
+$distance = $ARGV[2] || 0.3;
+$numnode=0;
+$nb_corners=8;
+
+# read datas
+open (DF, "$filein");
+while(my $line=<DF>)
+{ chomp $line;
+ if ($line =~ m/^(\s+\d+\.?\d*\s*)+$/)
+ { if ($line =~ m/\./)
+ { my @temp=split(/\s+/, $line);
+ shift @temp;
+
+ $nodes[$numnode] = \@temp;
+ $numnode++;
+ }
+ elsif ($line =~ m/(\s+\d+\s*){8}/)
+ { my @temp=split(/\s+/,$line);
+ shift @temp;
+ $hex[$numhex] = \@temp;
+ $numhex++;
+ }
+ else
+ { # couleur
+ }
+ }
+}
+close (DF);
+# dump datas into structure
+my @cubes;
+foreach $cube (@hex)
+{ my @corners;
+ foreach $corner (@{$cube})
+ { my @coords = @{$nodes[$corner]};
+ push(@corners, \@coords);
+ }
+ push (@cubes, \@corners);
+}
+# split the brick
+eclate($distance, at cubes);
+# write dx file
+dump_dx(@cubes);
+exit;
+
+sub eclate
+{ my ($dist, @cubes) = @_;
+ my ($mid_x,$mid_y,$mid_z) = mid_pos(@cubes);
+ foreach $cube(@cubes)
+ { ($mx, $my, $mz) = moy_pos($cube);
+ $dx = ($mx-$mid_x)*$dist;
+ $dy = ($my-$mid_y)*$dist;
+ $dz = ($mz-$mid_z)*$dist;
+ redefine($cube,$dx,$dy,$dz);
+ }
+}
+
+sub mid_pos
+{ my (@cubes) = @_;
+ my ($mx,$my,$mz)=(1000,1000,1000);
+ my ($Mx,$My,$Mz)=(-1000,-1000,-1000);
+ my $compt=0;
+ foreach $cube(@cubes)
+ { foreach my $corner (@{$cube})
+ { my ($tx,$ty,$tz) = @$corner;
+ $mx=$tx if ($tx < $mx);
+ $my=$ty if ($ty < $my);
+ $mz=$tz if ($tz < $mz);
+ $Mx=$tx if ($tx > $Mx);
+ $My=$ty if ($ty > $My);
+ $Mz=$tz if ($tz > $Mz);
+ }
+ }
+ return (($Mx+$mx)/2,($My+$my)/2,($Mz+$mz)/2);
+}
+
+sub moy_pos
+{ my $cube = shift;
+ my ($x,$y,$z)=(0,0,0);
+ my $compt=0;
+ foreach my $corner (@{$cube})
+ { my ($tx,$ty,$tz) = @$corner;
+ $x+=$tx;
+ $y+=$ty;
+ $z+=$tz;
+ $compt++;
+ }
+ ($x,$y,$z) = map ($_/$compt, ($x,$y,$z));
+ return ($x,$y,$z)
+}
+
+sub redefine
+{ my ($cube,$dx,$dy,$dz) = @_;
+ foreach my $corner (@{$cube})
+ { $corner->[0]+=$dx;
+ $corner->[1]+=$dy;
+ $corner->[2]+=$dz;
+ }
+}
+
+sub dump_dx
+{ my (@cubes) = @_;
+ open (OUT, ">$fileout");
+ $nb_nodes = $numhex * $nb_corners;
+ print OUT " object 1 class array type float rank 1 shape 3 items $nb_nodes data follows\n";
+ foreach my $uncube (@cubes)
+ { foreach my $uncoin (@$uncube)
+ { print OUT join(" ", @$uncoin),"\n";
+ }
+ }
+ print OUT " object 2 class array type int rank 1 shape 8 items $numhex data follows\n";
+ for ($i=0;$i<$nb_nodes;$i++)
+ { print OUT $i," ";
+ print OUT "\n" unless (($i+1)%$nb_corners);
+ }
+ print OUT "\n\n",' attribute "element type" string "cubes"',"\n",'attribute "ref" string "positions"',"\n",'object 3 class array type float rank 0 items ',$numhex," data follows\n";
+ for ($i=1;$i<$numhex+1;$i++) {print OUT $i,"\n";}
+ print OUT <<EOF
+ attribute "dep" string "connections"
+ object "irregular positions irregular connections" class field
+ component "positions" value 1
+ component "connections" value 2
+ component "data" value 3
+ end
+EOF
+;
+ close (OUT);
+}
+
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visu_valence_central_cube.cfg
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visu_valence_central_cube.cfg (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visu_valence_central_cube.cfg 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,59 @@
+//
+// time: Mon Dec 10 18:19:12 2007
+//
+// version: 3.2.0 (format), 4.4.4 (DX)
+//
+//
+// panel[3]: position = (0.3482,0.0543), size = 0.2232x0.4286, startup = 1, devstyle = 1, screen = 0
+// title: value = Control Panel
+//
+// workspace: width = 500, height = 500
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+// node Colormap[1]:
+// input[1]: defaulting = 0, value = { [0.0 0.666667] [1.0 0.0] }
+// input[2]: defaulting = 0, value = { [0.0 1.0] [1.0 1.0] }
+// input[3]: defaulting = 0, value = { [0.0 1.0] [1.0 1.0] }
+// input[4]: defaulting = 0, value = { [0.0 1.0] [1.0 1.0] }
+// input[5]: defaulting = 0, value = "Colormap_1"
+// input[7]: defaulting = 1, value = 0.0
+// input[8]: defaulting = 1, value = 6.0
+// input[9]: defaulting = 1, value = 20
+// input[12]: defaulting = 0, value = { 0.0 6.0 }
+// input[17]: defaulting = 0, value = 0.0
+// input[18]: defaulting = 0, value = 6.0
+// window: position = ( inf, inf), size = infx inf
+//
+// interactor Scalar[1]: num_components = 1, value = 0.0005
+// component[0]: minimum = -1e+06, maximum = 1e+06, global increment = 1, decimal = 5, global continuous = 0
+// instance: panel = 3, x = 5, y = 5, style = Stepper, vertical = 1, size = 150x56
+// local continuous: value = 0, mode = global
+// local increment[0]: value = 1, mode = global
+//
+// node Image[2]:
+// depth: value = 24
+// window: position = (0.4286,0.3305), size = 0.5667x0.6333, screen = 0
+// input[1]: defaulting = 0, value = "Image_2"
+// input[4]: defaulting = 0, value = 1
+// input[5]: defaulting = 0, value = [0.0639443 -0.0616337 0.0273752]
+// input[6]: defaulting = 0, value = [1.55495 2.88829 0.954069]
+// input[7]: defaulting = 0, value = 0.281381
+// input[8]: defaulting = 0, value = 938
+// input[9]: defaulting = 0, value = 0.664712
+// input[10]: defaulting = 0, value = [-0.0792268 -0.262092 0.961785]
+// input[11]: defaulting = 1, value = 4.69386
+// input[12]: defaulting = 0, value = 0
+// input[14]: defaulting = 0, value = 1
+// input[15]: defaulting = 0, value = "none"
+// input[16]: defaulting = 0, value = "none"
+// input[17]: defaulting = 0, value = 1
+// input[18]: defaulting = 0, value = 1
+// input[19]: defaulting = 0, value = 1
+// input[22]: defaulting = 0, value = "black"
+// input[25]: defaulting = 0, value = "/home/latychev/boo"
+// input[26]: defaulting = 0, value = "eps gray dpi=86 orient=portrait"
+// input[29]: defaulting = 0, value = 0
+// input[33]: defaulting = 0, value = 0
+// input[36]: defaulting = 0, value = 0
+// input[41]: defaulting = 0, value = "rotate"
+// internal caching: 1
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visu_valence_central_cube.net
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visu_valence_central_cube.net (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visu_valence_central_cube.net 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,634 @@
+//
+// time: Mon Dec 10 18:19:12 2007
+//
+// version: 3.2.0 (format), 4.4.4 (DX)
+//
+//
+// MODULE main
+// workspace: width = 366, height = 644
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+macro main(
+) -> (
+) {
+ //
+ // node Import[2]: x = 218, y = 0, inputs = 6, label = Import
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "debug_val_proc_0.dx"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "dx"
+ //
+main_Import_2_out_1 =
+ Import(
+ main_Import_2_in_1,
+ main_Import_2_in_2,
+ main_Import_2_in_3,
+ main_Import_2_in_4,
+ main_Import_2_in_5,
+ main_Import_2_in_6
+ ) [instance: 2, cache: 1];
+ //
+ // node Regrid[1]: x = 103, y = 98, inputs = 6, label = Regrid
+ //
+main_Regrid_1_out_1 =
+ Regrid(
+ main_Import_2_out_1,
+ main_Import_2_out_1,
+ main_Regrid_1_in_3,
+ main_Regrid_1_in_4,
+ main_Regrid_1_in_5,
+ main_Regrid_1_in_6
+ ) [instance: 1, cache: 1];
+ //
+ // node Colormap[1]: x = 266, y = 96, inputs = 19, label = Colormap
+ // input[1]: defaulting = 0, visible = 0, type = 16777224, value = { [0.0 0.666667] [1.0 0.0] }
+ // input[2]: defaulting = 0, visible = 0, type = 16777224, value = { [0.0 1.0] [1.0 1.0] }
+ // input[3]: defaulting = 0, visible = 0, type = 16777224, value = { [0.0 1.0] [1.0 1.0] }
+ // input[4]: defaulting = 0, visible = 0, type = 16777224, value = { [0.0 1.0] [1.0 1.0] }
+ // input[5]: defaulting = 0, visible = 0, type = 32, value = "Colormap_1"
+ // input[7]: defaulting = 1, visible = 0, type = 5, value = 0.0
+ // input[8]: defaulting = 1, visible = 0, type = 5, value = 6.0
+ // input[9]: defaulting = 1, visible = 0, type = 1, value = 20
+ // input[12]: defaulting = 0, visible = 0, type = 16777221, value = { 0.0 6.0 }
+ // input[17]: defaulting = 0, visible = 0, type = 5, value = 0.0
+ // input[18]: defaulting = 0, visible = 0, type = 5, value = 6.0
+ // window: position = ( inf, inf), size = infx inf
+ //
+main_Colormap_1_out_1[cache: 2],
+main_Colormap_1_out_2[cache: 2] =
+ Colormap(
+ main_Colormap_1_in_1,
+ main_Colormap_1_in_2,
+ main_Colormap_1_in_3,
+ main_Colormap_1_in_4,
+ main_Colormap_1_in_5,
+ main_Import_2_out_1,
+ main_Colormap_1_in_7,
+ main_Colormap_1_in_8,
+ main_Colormap_1_in_9,
+ main_Colormap_1_in_10,
+ main_Colormap_1_in_11,
+ main_Colormap_1_in_12,
+ main_Colormap_1_in_13,
+ main_Colormap_1_in_14,
+ main_Colormap_1_in_15,
+ main_Colormap_1_in_16,
+ main_Colormap_1_in_17,
+ main_Colormap_1_in_18,
+ main_Colormap_1_in_19
+ ) [instance: 1, cache: 1];
+ //
+ // node Color[1]: x = 198, y = 202, inputs = 5, label = Color
+ //
+main_Color_1_out_1 =
+ Color(
+ main_Regrid_1_out_1,
+ main_Colormap_1_out_1,
+ main_Color_1_in_3,
+ main_Color_1_in_4,
+ main_Color_1_in_5
+ ) [instance: 1, cache: 1];
+ //
+ // node ShowPositions[1]: x = 14, y = 279, inputs = 2, label = ShowPositions
+ //
+main_ShowPositions_1_out_1 =
+ ShowPositions(
+ main_Color_1_out_1,
+ main_ShowPositions_1_in_2
+ ) [instance: 1, cache: 1];
+ //
+ // node Scalar[1]: x = 167, y = 399, inputs = 11, label = Scalar
+ // input[1]: defaulting = 0, visible = 0, type = 32, value = "Scalar_1"
+ // input[3]: defaulting = 0, visible = 0, type = 5, value = 0.0005
+ // input[5]: defaulting = 1, visible = 0, type = 5, value = -1000000.0
+ // input[6]: defaulting = 1, visible = 0, type = 5, value = 1000000.0
+ // input[7]: defaulting = 1, visible = 0, type = 5, value = 1.0
+ // input[9]: defaulting = 1, visible = 0, type = 1, value = 5
+ // output[1]: visible = 1, type = 5, value = 0.0005
+ //
+ //
+ // node Glyph[1]: x = 18, y = 432, inputs = 7, label = Glyph
+ //
+main_Glyph_1_out_1 =
+ Glyph(
+ main_ShowPositions_1_out_1,
+ main_Glyph_1_in_2,
+ main_Glyph_1_in_3,
+ main_Scalar_1_out_1,
+ main_Glyph_1_in_5,
+ main_Glyph_1_in_6,
+ main_Glyph_1_in_7
+ ) [instance: 1, cache: 1];
+ //
+ // node Collect[1]: x = 270, y = 500, inputs = 4, label = Collect
+ //
+main_Collect_1_out_1 =
+ Collect(
+ main_Glyph_1_out_1,
+ main_ShowPositions_1_out_1,
+ main_Color_1_out_1,
+ main_Collect_1_in_4
+ ) [instance: 1, cache: 1];
+ //
+ // node Image[2]: x = 282, y = 582, inputs = 49, label = Image
+ // input[1]: defaulting = 0, visible = 0, type = 67108863, value = "Image_2"
+ // input[4]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[5]: defaulting = 0, visible = 0, type = 8, value = [0.0639443 -0.0616337 0.0273752]
+ // input[6]: defaulting = 0, visible = 0, type = 8, value = [1.55495 2.88829 0.954069]
+ // input[7]: defaulting = 0, visible = 0, type = 5, value = 0.281381
+ // input[8]: defaulting = 0, visible = 0, type = 1, value = 938
+ // input[9]: defaulting = 0, visible = 0, type = 5, value = 0.664712
+ // input[10]: defaulting = 0, visible = 0, type = 8, value = [-0.0792268 -0.262092 0.961785]
+ // input[11]: defaulting = 1, visible = 0, type = 5, value = 4.69386
+ // input[12]: defaulting = 0, visible = 0, type = 1, value = 0
+ // input[14]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[15]: defaulting = 0, visible = 0, type = 32, value = "none"
+ // input[16]: defaulting = 0, visible = 0, type = 32, value = "none"
+ // input[17]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[18]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[19]: defaulting = 0, visible = 0, type = 3, value = 1
+ // input[22]: defaulting = 0, visible = 0, type = 32, value = "black"
+ // input[25]: defaulting = 0, visible = 0, type = 32, value = "/home/latychev/boo"
+ // input[26]: defaulting = 0, visible = 0, type = 32, value = "eps gray dpi=86 orient=portrait"
+ // input[29]: defaulting = 0, visible = 0, type = 3, value = 0
+ // input[33]: defaulting = 0, visible = 0, type = 3, value = 0
+ // input[36]: defaulting = 0, visible = 0, type = 3, value = 0
+ // input[41]: defaulting = 0, visible = 0, type = 32, value = "rotate"
+ // depth: value = 24
+ // window: position = (0.4286,0.3305), size = 0.5667x0.6333, screen = 0
+ // internal caching: 1
+ //
+main_Image_2_out_1,
+main_Image_2_out_2,
+main_Image_2_out_3 =
+ Image(
+ main_Image_2_in_1,
+ main_Collect_1_out_1,
+ main_Image_2_in_3,
+ main_Image_2_in_4,
+ main_Image_2_in_5,
+ main_Image_2_in_6,
+ main_Image_2_in_7,
+ main_Image_2_in_8,
+ main_Image_2_in_9,
+ main_Image_2_in_10,
+ main_Image_2_in_11,
+ main_Image_2_in_12,
+ main_Image_2_in_13,
+ main_Image_2_in_14,
+ main_Image_2_in_15,
+ main_Image_2_in_16,
+ main_Image_2_in_17,
+ main_Image_2_in_18,
+ main_Image_2_in_19,
+ main_Image_2_in_20,
+ main_Image_2_in_21,
+ main_Image_2_in_22,
+ main_Image_2_in_23,
+ main_Image_2_in_24,
+ main_Image_2_in_25,
+ main_Image_2_in_26,
+ main_Image_2_in_27,
+ main_Image_2_in_28,
+ main_Image_2_in_29,
+ main_Image_2_in_30,
+ main_Image_2_in_31,
+ main_Image_2_in_32,
+ main_Image_2_in_33,
+ main_Image_2_in_34,
+ main_Image_2_in_35,
+ main_Image_2_in_36,
+ main_Image_2_in_37,
+ main_Image_2_in_38,
+ main_Image_2_in_39,
+ main_Image_2_in_40,
+ main_Image_2_in_41,
+ main_Image_2_in_42,
+ main_Image_2_in_43,
+ main_Image_2_in_44,
+ main_Image_2_in_45,
+ main_Image_2_in_46,
+ main_Image_2_in_47,
+ main_Image_2_in_48,
+ main_Image_2_in_49
+ ) [instance: 2, cache: 1];
+// network: end of macro body
+CacheScene(main_Image_2_in_1, main_Image_2_out_1, main_Image_2_out_2);
+}
+main_Import_2_in_1 = "debug_val_proc_0.dx";
+main_Import_2_in_2 = NULL;
+main_Import_2_in_3 = "dx";
+main_Import_2_in_4 = NULL;
+main_Import_2_in_5 = NULL;
+main_Import_2_in_6 = NULL;
+main_Import_2_out_1 = NULL;
+main_Regrid_1_in_3 = NULL;
+main_Regrid_1_in_4 = NULL;
+main_Regrid_1_in_5 = NULL;
+main_Regrid_1_in_6 = NULL;
+main_Regrid_1_out_1 = NULL;
+main_Colormap_1_in_1 = { [0.0 0.666667] [1.0 0.0] };
+main_Colormap_1_in_2 = { [0.0 1.0] [1.0 1.0] };
+main_Colormap_1_in_3 = { [0.0 1.0] [1.0 1.0] };
+main_Colormap_1_in_4 = { [0.0 1.0] [1.0 1.0] };
+main_Colormap_1_in_5 = "Colormap_1";
+main_Colormap_1_in_7 = NULL;
+main_Colormap_1_in_8 = NULL;
+main_Colormap_1_in_9 = NULL;
+main_Colormap_1_in_10 = NULL;
+main_Colormap_1_in_11 = NULL;
+main_Colormap_1_in_12 = { 0.0 6.0 };
+main_Colormap_1_in_13 = NULL;
+main_Colormap_1_in_14 = NULL;
+main_Colormap_1_in_15 = NULL;
+main_Colormap_1_in_16 = NULL;
+main_Colormap_1_in_17 = 0.0;
+main_Colormap_1_in_18 = 6.0;
+main_Colormap_1_in_19 = NULL;
+main_Colormap_1_out_1 = NULL;
+main_Color_1_in_3 = NULL;
+main_Color_1_in_4 = NULL;
+main_Color_1_in_5 = NULL;
+main_Color_1_out_1 = NULL;
+main_ShowPositions_1_in_2 = NULL;
+main_ShowPositions_1_out_1 = NULL;
+main_Scalar_1_in_1 = "Scalar_1";
+main_Scalar_1_in_2 = NULL;
+main_Scalar_1_in_3 = 0.0005 ;
+main_Scalar_1_in_4 = NULL;
+main_Scalar_1_in_5 = NULL;
+main_Scalar_1_in_6 = NULL;
+main_Scalar_1_in_7 = NULL;
+main_Scalar_1_in_8 = NULL;
+main_Scalar_1_in_9 = NULL;
+main_Scalar_1_in_10 = NULL;
+main_Scalar_1_in_11 = NULL;
+main_Scalar_1_out_1 = 0.0005 ;
+main_Glyph_1_in_2 = NULL;
+main_Glyph_1_in_3 = NULL;
+main_Glyph_1_in_5 = NULL;
+main_Glyph_1_in_6 = NULL;
+main_Glyph_1_in_7 = NULL;
+main_Glyph_1_out_1 = NULL;
+main_Collect_1_in_4 = NULL;
+main_Collect_1_out_1 = NULL;
+macro Image(
+ id,
+ object,
+ where,
+ useVector,
+ to,
+ from,
+ width,
+ resolution,
+ aspect,
+ up,
+ viewAngle,
+ perspective,
+ options,
+ buttonState = 1,
+ buttonUpApprox = "none",
+ buttonDownApprox = "none",
+ buttonUpDensity = 1,
+ buttonDownDensity = 1,
+ renderMode = 0,
+ defaultCamera,
+ reset,
+ backgroundColor,
+ throttle,
+ RECenable = 0,
+ RECfile,
+ RECformat,
+ RECresolution,
+ RECaspect,
+ AAenable = 0,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ interactionMode,
+ title,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels,
+ webOptions) -> (
+ object,
+ camera,
+ where)
+{
+ ImageMessage(
+ id,
+ backgroundColor,
+ throttle,
+ RECenable,
+ RECfile,
+ RECformat,
+ RECresolution,
+ RECaspect,
+ AAenable,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels,
+ interactionMode,
+ title,
+ renderMode,
+ buttonUpApprox,
+ buttonDownApprox,
+ buttonUpDensity,
+ buttonDownDensity) [instance: 1, cache: 1];
+ autoCamera =
+ AutoCamera(
+ object,
+ "front",
+ object,
+ resolution,
+ aspect,
+ [0,1,0],
+ perspective,
+ viewAngle,
+ backgroundColor) [instance: 1, cache: 1];
+ realCamera =
+ Camera(
+ to,
+ from,
+ width,
+ resolution,
+ aspect,
+ up,
+ perspective,
+ viewAngle,
+ backgroundColor) [instance: 1, cache: 1];
+ coloredDefaultCamera =
+ UpdateCamera(defaultCamera,
+ background=backgroundColor) [instance: 1, cache: 1];
+ nullDefaultCamera =
+ Inquire(defaultCamera,
+ "is null + 1") [instance: 1, cache: 1];
+ resetCamera =
+ Switch(
+ nullDefaultCamera,
+ coloredDefaultCamera,
+ autoCamera) [instance: 1, cache: 1];
+ resetNull =
+ Inquire(
+ reset,
+ "is null + 1") [instance: 2, cache: 1];
+ reset =
+ Switch(
+ resetNull,
+ reset,
+ 0) [instance: 2, cache: 1];
+ whichCamera =
+ Compute(
+ "($0 != 0 || $1 == 0) ? 1 : 2",
+ reset,
+ useVector) [instance: 1, cache: 1];
+ camera = Switch(
+ whichCamera,
+ resetCamera,
+ realCamera) [instance: 3, cache: 1];
+ AAobject =
+ AutoAxes(
+ object,
+ camera,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels) [instance: 1, cache: 1];
+ switchAAenable = Compute("$0+1",
+ AAenable) [instance: 2, cache: 1];
+ object = Switch(
+ switchAAenable,
+ object,
+ AAobject) [instance:4, cache: 1];
+ SWapproximation_options =
+ Switch(
+ buttonState,
+ buttonUpApprox,
+ buttonDownApprox) [instance: 5, cache: 1];
+ SWdensity_options =
+ Switch(
+ buttonState,
+ buttonUpDensity,
+ buttonDownDensity) [instance: 6, cache: 1];
+ HWapproximation_options =
+ Format(
+ "%s,%s",
+ buttonDownApprox,
+ buttonUpApprox) [instance: 1, cache: 1];
+ HWdensity_options =
+ Format(
+ "%d,%d",
+ buttonDownDensity,
+ buttonUpDensity) [instance: 2, cache: 1];
+ switchRenderMode = Compute(
+ "$0+1",
+ renderMode) [instance: 3, cache: 1];
+ approximation_options = Switch(
+ switchRenderMode,
+ SWapproximation_options,
+ HWapproximation_options) [instance: 7, cache: 1];
+ density_options = Switch(
+ switchRenderMode,
+ SWdensity_options,
+ HWdensity_options) [instance: 8, cache: 1];
+ renderModeString = Switch(
+ switchRenderMode,
+ "software",
+ "hardware")[instance: 9, cache: 1];
+ object_tag = Inquire(
+ object,
+ "object tag")[instance: 3, cache: 1];
+ annoted_object =
+ Options(
+ object,
+ "send boxes",
+ 0,
+ "cache",
+ 1,
+ "object tag",
+ object_tag,
+ "ddcamera",
+ whichCamera,
+ "rendering approximation",
+ approximation_options,
+ "render every",
+ density_options,
+ "button state",
+ buttonState,
+ "rendering mode",
+ renderModeString) [instance: 1, cache: 1];
+ RECresNull =
+ Inquire(
+ RECresolution,
+ "is null + 1") [instance: 4, cache: 1];
+ ImageResolution =
+ Inquire(
+ camera,
+ "camera resolution") [instance: 5, cache: 1];
+ RECresolution =
+ Switch(
+ RECresNull,
+ RECresolution,
+ ImageResolution) [instance: 10, cache: 1];
+ RECaspectNull =
+ Inquire(
+ RECaspect,
+ "is null + 1") [instance: 6, cache: 1];
+ ImageAspect =
+ Inquire(
+ camera,
+ "camera aspect") [instance: 7, cache: 1];
+ RECaspect =
+ Switch(
+ RECaspectNull,
+ RECaspect,
+ ImageAspect) [instance: 11, cache: 1];
+ switchRECenable = Compute(
+ "$0 == 0 ? 1 : (($2 == $3) && ($4 == $5)) ? ($1 == 1 ? 2 : 3) : 4",
+ RECenable,
+ switchRenderMode,
+ RECresolution,
+ ImageResolution,
+ RECaspect,
+ ImageAspect) [instance: 4, cache: 1];
+ NoRECobject, RECNoRerenderObject, RECNoRerHW, RECRerenderObject = Route(switchRECenable, annoted_object);
+ Display(
+ NoRECobject,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 1];
+ image =
+ Render(
+ RECNoRerenderObject,
+ camera) [instance: 1, cache: 1];
+ Display(
+ image,
+ NULL,
+ where,
+ throttle) [instance: 2, cache: 1];
+ WriteImage(
+ image,
+ RECfile,
+ RECformat) [instance: 1, cache: 1];
+ rec_where = Display(
+ RECNoRerHW,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 0];
+ rec_image = ReadImageWindow(
+ rec_where) [instance: 1, cache: 1];
+ WriteImage(
+ rec_image,
+ RECfile,
+ RECformat) [instance: 1, cache: 1];
+ RECupdateCamera =
+ UpdateCamera(
+ camera,
+ resolution=RECresolution,
+ aspect=RECaspect) [instance: 2, cache: 1];
+ Display(
+ RECRerenderObject,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 1];
+ RECRerenderObject =
+ ScaleScreen(
+ RECRerenderObject,
+ NULL,
+ RECresolution,
+ camera) [instance: 1, cache: 1];
+ image =
+ Render(
+ RECRerenderObject,
+ RECupdateCamera) [instance: 2, cache: 1];
+ WriteImage(
+ image,
+ RECfile,
+ RECformat) [instance: 2, cache: 1];
+}
+main_Image_2_in_1 = "Image_2";
+main_Image_2_in_3 = "X24,,";
+main_Image_2_in_4 = 1;
+main_Image_2_in_5 = [0.0639443 -0.0616337 0.0273752];
+main_Image_2_in_6 = [1.55495 2.88829 0.954069];
+main_Image_2_in_7 = 0.281381;
+main_Image_2_in_8 = 938;
+main_Image_2_in_9 = 0.664712;
+main_Image_2_in_10 = [-0.0792268 -0.262092 0.961785];
+main_Image_2_in_11 = NULL;
+main_Image_2_in_12 = 0;
+main_Image_2_in_13 = NULL;
+main_Image_2_in_14 = 1;
+main_Image_2_in_15 = "none";
+main_Image_2_in_16 = "none";
+main_Image_2_in_17 = 1;
+main_Image_2_in_18 = 1;
+main_Image_2_in_19 = 1;
+main_Image_2_in_20 = NULL;
+main_Image_2_in_21 = NULL;
+main_Image_2_in_22 = "black";
+main_Image_2_in_23 = NULL;
+main_Image_2_in_25 = "/home/latychev/boo";
+main_Image_2_in_26 = "eps gray dpi=86 orient=portrait";
+main_Image_2_in_27 = NULL;
+main_Image_2_in_28 = NULL;
+main_Image_2_in_29 = 0;
+main_Image_2_in_30 = NULL;
+main_Image_2_in_31 = NULL;
+main_Image_2_in_32 = NULL;
+main_Image_2_in_33 = 0;
+main_Image_2_in_34 = NULL;
+main_Image_2_in_35 = NULL;
+main_Image_2_in_36 = 0;
+main_Image_2_in_37 = NULL;
+main_Image_2_in_38 = NULL;
+main_Image_2_in_39 = NULL;
+main_Image_2_in_40 = NULL;
+main_Image_2_in_41 = "rotate";
+main_Image_2_in_42 = NULL;
+main_Image_2_in_43 = NULL;
+main_Image_2_in_44 = NULL;
+main_Image_2_in_45 = NULL;
+main_Image_2_in_46 = NULL;
+main_Image_2_in_47 = NULL;
+main_Image_2_in_48 = NULL;
+main_Image_2_in_49 = NULL;
+Executive("product version 4 4 4");
+$sync
+main();
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visualize_mesh_DX.cfg
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visualize_mesh_DX.cfg (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visualize_mesh_DX.cfg 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,45 @@
+//
+// time: Sun Feb 20 16:26:15 2005
+//
+// version: 3.2.0 (format), 4.3.2 (DX)
+//
+//
+// panel[0]: position = (0.0750,0.6982), size = 0.2781x0.1611, startup = 1, devstyle = 1
+// title: value = Control Panel
+//
+// workspace: width = 500, height = 500
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+// panel[2]: position = (0.3609,0.6982), size = 0.2773x0.1611, startup = 1, devstyle = 1
+// title: value = Control Panel
+//
+// workspace: width = 500, height = 500
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+// node Image[2]:
+// depth: value = 24
+// window: position = (0.0000,0.1631), size = 0.5664x0.6338
+// input[1]: defaulting = 0, value = "Image_2"
+// input[4]: defaulting = 0, value = 1
+// input[5]: defaulting = 0, value = [360000 130000 -9842.12]
+// input[6]: defaulting = 0, value = [293951 33251.2 58936.7]
+// input[7]: defaulting = 0, value = 72798.2
+// input[8]: defaulting = 0, value = 711
+// input[9]: defaulting = 0, value = 0.85443
+// input[10]: defaulting = 0, value = [0.244732 0.445238 0.861319]
+// input[11]: defaulting = 1, value = 30.0001
+// input[12]: defaulting = 0, value = 0
+// input[14]: defaulting = 0, value = 1
+// input[15]: defaulting = 0, value = "none"
+// input[16]: defaulting = 0, value = "none"
+// input[17]: defaulting = 0, value = 1
+// input[18]: defaulting = 0, value = 1
+// input[19]: defaulting = 0, value = 1
+// input[22]: defaulting = 0, value = "black"
+// input[25]: defaulting = 0, value = "/home/latychev/boo"
+// input[26]: defaulting = 0, value = "eps gray dpi=86 orient=portrait"
+// input[29]: defaulting = 0, value = 0
+// input[33]: defaulting = 0, value = 1
+// input[36]: defaulting = 0, value = 1
+// input[41]: defaulting = 0, value = "rotate"
+// internal caching: 1
Added: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visualize_mesh_DX.net
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visualize_mesh_DX.net (rev 0)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/Visualization/opendx_AVS/visualize_mesh_DX.net 2010-02-20 19:58:48 UTC (rev 16284)
@@ -0,0 +1,585 @@
+//
+// time: Sun Feb 20 16:26:15 2005
+//
+// version: 3.2.0 (format), 4.3.2 (DX)
+//
+//
+// MODULE main
+// workspace: width = 549, height = 602
+// layout: snap = 0, width = 50, height = 50, align = NN
+//
+macro main(
+) -> (
+) {
+ //
+ // node AmbientLight[1]: x = 303, y = 277, inputs = 1, label = AmbientLight
+ //
+main_AmbientLight_1_out_1 =
+ AmbientLight(
+ main_AmbientLight_1_in_1
+ ) [instance: 1, cache: 1];
+ //
+ // node Import[2]: x = 193, y = 42, inputs = 6, label = Import
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "DX_fullmesh.dx"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "dx"
+ //
+main_Import_2_out_1 =
+ Import(
+ main_Import_2_in_1,
+ main_Import_2_in_2,
+ main_Import_2_in_3,
+ main_Import_2_in_4,
+ main_Import_2_in_5,
+ main_Import_2_in_6
+ ) [instance: 2, cache: 1];
+ //
+ // node AutoColor[1]: x = 178, y = 167, inputs = 10, label = AutoColor
+ //
+main_AutoColor_1_out_1,
+main_AutoColor_1_out_2 =
+ AutoColor(
+ main_Import_2_out_1,
+ main_AutoColor_1_in_2,
+ main_AutoColor_1_in_3,
+ main_AutoColor_1_in_4,
+ main_AutoColor_1_in_5,
+ main_AutoColor_1_in_6,
+ main_AutoColor_1_in_7,
+ main_AutoColor_1_in_8,
+ main_AutoColor_1_in_9,
+ main_AutoColor_1_in_10
+ ) [instance: 1, cache: 1];
+ //
+ // node Import[4]: x = 477, y = 79, inputs = 6, label = Import
+ // input[1]: defaulting = 0, visible = 1, type = 32, value = "DX_highwayscoast_papers.dx"
+ // input[3]: defaulting = 0, visible = 1, type = 32, value = "dx"
+ //
+main_Import_4_out_1 =
+ Import(
+ main_Import_4_in_1,
+ main_Import_4_in_2,
+ main_Import_4_in_3,
+ main_Import_4_in_4,
+ main_Import_4_in_5,
+ main_Import_4_in_6
+ ) [instance: 4, cache: 1];
+ //
+ // node AutoColor[3]: x = 428, y = 202, inputs = 10, label = AutoColor
+ //
+main_AutoColor_3_out_1,
+main_AutoColor_3_out_2 =
+ AutoColor(
+ main_Import_4_out_1,
+ main_AutoColor_3_in_2,
+ main_AutoColor_3_in_3,
+ main_AutoColor_3_in_4,
+ main_AutoColor_3_in_5,
+ main_AutoColor_3_in_6,
+ main_AutoColor_3_in_7,
+ main_AutoColor_3_in_8,
+ main_AutoColor_3_in_9,
+ main_AutoColor_3_in_10
+ ) [instance: 3, cache: 1];
+ //
+ // node ShowConnections[1]: x = 49, y = 315, inputs = 1, label = ShowConnections
+ //
+main_ShowConnections_1_out_1 =
+ ShowConnections(
+ main_AutoColor_1_out_1
+ ) [instance: 1, cache: 1];
+ //
+ // node Collect[1]: x = 167, y = 429, inputs = 4, label = Collect
+ //
+main_Collect_1_out_1 =
+ Collect(
+ main_ShowConnections_1_out_1,
+ main_AutoColor_1_out_1,
+ main_AmbientLight_1_out_1,
+ main_Collect_1_in_4
+ ) [instance: 1, cache: 1];
+ //
+ // node Image[2]: x = 192, y = 540, inputs = 49, label = Image
+ // input[1]: defaulting = 0, visible = 0, type = 67108863, value = "Image_2"
+ // input[4]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[5]: defaulting = 0, visible = 0, type = 8, value = [360000 130000 -9842.12]
+ // input[6]: defaulting = 0, visible = 0, type = 8, value = [293951 33251.2 58936.7]
+ // input[7]: defaulting = 0, visible = 0, type = 5, value = 72798.2
+ // input[8]: defaulting = 0, visible = 0, type = 1, value = 711
+ // input[9]: defaulting = 0, visible = 0, type = 5, value = 0.85443
+ // input[10]: defaulting = 0, visible = 0, type = 8, value = [0.244732 0.445238 0.861319]
+ // input[11]: defaulting = 1, visible = 0, type = 5, value = 30.0001
+ // input[12]: defaulting = 0, visible = 0, type = 1, value = 0
+ // input[14]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[15]: defaulting = 0, visible = 0, type = 32, value = "none"
+ // input[16]: defaulting = 0, visible = 0, type = 32, value = "none"
+ // input[17]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[18]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[19]: defaulting = 0, visible = 0, type = 1, value = 1
+ // input[22]: defaulting = 0, visible = 0, type = 32, value = "black"
+ // input[25]: defaulting = 0, visible = 0, type = 32, value = "/home/latychev/boo"
+ // input[26]: defaulting = 0, visible = 0, type = 32, value = "eps gray dpi=86 orient=portrait"
+ // input[29]: defaulting = 0, visible = 0, type = 3, value = 0
+ // input[33]: defaulting = 0, visible = 0, type = 3, value = 1
+ // input[36]: defaulting = 0, visible = 0, type = 3, value = 1
+ // input[41]: defaulting = 0, visible = 0, type = 32, value = "rotate"
+ // depth: value = 24
+ // window: position = (0.0000,0.1631), size = 0.5664x0.6338
+ // internal caching: 1
+ //
+main_Image_2_out_1,
+main_Image_2_out_2,
+main_Image_2_out_3 =
+ Image(
+ main_Image_2_in_1,
+ main_Collect_1_out_1,
+ main_Image_2_in_3,
+ main_Image_2_in_4,
+ main_Image_2_in_5,
+ main_Image_2_in_6,
+ main_Image_2_in_7,
+ main_Image_2_in_8,
+ main_Image_2_in_9,
+ main_Image_2_in_10,
+ main_Image_2_in_11,
+ main_Image_2_in_12,
+ main_Image_2_in_13,
+ main_Image_2_in_14,
+ main_Image_2_in_15,
+ main_Image_2_in_16,
+ main_Image_2_in_17,
+ main_Image_2_in_18,
+ main_Image_2_in_19,
+ main_Image_2_in_20,
+ main_Image_2_in_21,
+ main_Image_2_in_22,
+ main_Image_2_in_23,
+ main_Image_2_in_24,
+ main_Image_2_in_25,
+ main_Image_2_in_26,
+ main_Image_2_in_27,
+ main_Image_2_in_28,
+ main_Image_2_in_29,
+ main_Image_2_in_30,
+ main_Image_2_in_31,
+ main_Image_2_in_32,
+ main_Image_2_in_33,
+ main_Image_2_in_34,
+ main_Image_2_in_35,
+ main_Image_2_in_36,
+ main_Image_2_in_37,
+ main_Image_2_in_38,
+ main_Image_2_in_39,
+ main_Image_2_in_40,
+ main_Image_2_in_41,
+ main_Image_2_in_42,
+ main_Image_2_in_43,
+ main_Image_2_in_44,
+ main_Image_2_in_45,
+ main_Image_2_in_46,
+ main_Image_2_in_47,
+ main_Image_2_in_48,
+ main_Image_2_in_49
+ ) [instance: 2, cache: 1];
+// network: end of macro body
+CacheScene(main_Image_2_in_1, main_Image_2_out_1, main_Image_2_out_2);
+}
+main_AmbientLight_1_in_1 = NULL;
+main_AmbientLight_1_out_1 = NULL;
+main_Import_2_in_1 = "DX_fullmesh.dx";
+main_Import_2_in_2 = NULL;
+main_Import_2_in_3 = "dx";
+main_Import_2_in_4 = NULL;
+main_Import_2_in_5 = NULL;
+main_Import_2_in_6 = NULL;
+main_Import_2_out_1 = NULL;
+main_AutoColor_1_in_2 = NULL;
+main_AutoColor_1_in_3 = NULL;
+main_AutoColor_1_in_4 = NULL;
+main_AutoColor_1_in_5 = NULL;
+main_AutoColor_1_in_6 = NULL;
+main_AutoColor_1_in_7 = NULL;
+main_AutoColor_1_in_8 = NULL;
+main_AutoColor_1_in_9 = NULL;
+main_AutoColor_1_in_10 = NULL;
+main_AutoColor_1_out_1 = NULL;
+main_Import_4_in_1 = "DX_highwayscoast_papers.dx";
+main_Import_4_in_2 = NULL;
+main_Import_4_in_3 = "dx";
+main_Import_4_in_4 = NULL;
+main_Import_4_in_5 = NULL;
+main_Import_4_in_6 = NULL;
+main_Import_4_out_1 = NULL;
+main_AutoColor_3_in_2 = NULL;
+main_AutoColor_3_in_3 = NULL;
+main_AutoColor_3_in_4 = NULL;
+main_AutoColor_3_in_5 = NULL;
+main_AutoColor_3_in_6 = NULL;
+main_AutoColor_3_in_7 = NULL;
+main_AutoColor_3_in_8 = NULL;
+main_AutoColor_3_in_9 = NULL;
+main_AutoColor_3_in_10 = NULL;
+main_ShowConnections_1_out_1 = NULL;
+main_Collect_1_in_4 = NULL;
+main_Collect_1_out_1 = NULL;
+macro Image(
+ id,
+ object,
+ where,
+ useVector,
+ to,
+ from,
+ width,
+ resolution,
+ aspect,
+ up,
+ viewAngle,
+ perspective,
+ options,
+ buttonState = 1,
+ buttonUpApprox = "none",
+ buttonDownApprox = "none",
+ buttonUpDensity = 1,
+ buttonDownDensity = 1,
+ renderMode = 0,
+ defaultCamera,
+ reset,
+ backgroundColor,
+ throttle,
+ RECenable = 0,
+ RECfile,
+ RECformat,
+ RECresolution,
+ RECaspect,
+ AAenable = 0,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ interactionMode,
+ title,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels,
+ webOptions) -> (
+ object,
+ camera,
+ where)
+{
+ ImageMessage(
+ id,
+ backgroundColor,
+ throttle,
+ RECenable,
+ RECfile,
+ RECformat,
+ RECresolution,
+ RECaspect,
+ AAenable,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels,
+ interactionMode,
+ title,
+ renderMode,
+ buttonUpApprox,
+ buttonDownApprox,
+ buttonUpDensity,
+ buttonDownDensity) [instance: 1, cache: 1];
+ autoCamera =
+ AutoCamera(
+ object,
+ "front",
+ object,
+ resolution,
+ aspect,
+ [0,1,0],
+ perspective,
+ viewAngle,
+ backgroundColor) [instance: 1, cache: 1];
+ realCamera =
+ Camera(
+ to,
+ from,
+ width,
+ resolution,
+ aspect,
+ up,
+ perspective,
+ viewAngle,
+ backgroundColor) [instance: 1, cache: 1];
+ coloredDefaultCamera =
+ UpdateCamera(defaultCamera,
+ background=backgroundColor) [instance: 1, cache: 1];
+ nullDefaultCamera =
+ Inquire(defaultCamera,
+ "is null + 1") [instance: 1, cache: 1];
+ resetCamera =
+ Switch(
+ nullDefaultCamera,
+ coloredDefaultCamera,
+ autoCamera) [instance: 1, cache: 1];
+ resetNull =
+ Inquire(
+ reset,
+ "is null + 1") [instance: 2, cache: 1];
+ reset =
+ Switch(
+ resetNull,
+ reset,
+ 0) [instance: 2, cache: 1];
+ whichCamera =
+ Compute(
+ "($0 != 0 || $1 == 0) ? 1 : 2",
+ reset,
+ useVector) [instance: 1, cache: 1];
+ camera = Switch(
+ whichCamera,
+ resetCamera,
+ realCamera) [instance: 3, cache: 1];
+ AAobject =
+ AutoAxes(
+ object,
+ camera,
+ AAlabels,
+ AAticks,
+ AAcorners,
+ AAframe,
+ AAadjust,
+ AAcursor,
+ AAgrid,
+ AAcolors,
+ AAannotation,
+ AAlabelscale,
+ AAfont,
+ AAxTickLocs,
+ AAyTickLocs,
+ AAzTickLocs,
+ AAxTickLabels,
+ AAyTickLabels,
+ AAzTickLabels) [instance: 1, cache: 1];
+ switchAAenable = Compute("$0+1",
+ AAenable) [instance: 2, cache: 1];
+ object = Switch(
+ switchAAenable,
+ object,
+ AAobject) [instance:4, cache: 1];
+ SWapproximation_options =
+ Switch(
+ buttonState,
+ buttonUpApprox,
+ buttonDownApprox) [instance: 5, cache: 1];
+ SWdensity_options =
+ Switch(
+ buttonState,
+ buttonUpDensity,
+ buttonDownDensity) [instance: 6, cache: 1];
+ HWapproximation_options =
+ Format(
+ "%s,%s",
+ buttonDownApprox,
+ buttonUpApprox) [instance: 1, cache: 1];
+ HWdensity_options =
+ Format(
+ "%d,%d",
+ buttonDownDensity,
+ buttonUpDensity) [instance: 2, cache: 1];
+ switchRenderMode = Compute(
+ "$0+1",
+ renderMode) [instance: 3, cache: 1];
+ approximation_options = Switch(
+ switchRenderMode,
+ SWapproximation_options,
+ HWapproximation_options) [instance: 7, cache: 1];
+ density_options = Switch(
+ switchRenderMode,
+ SWdensity_options,
+ HWdensity_options) [instance: 8, cache: 1];
+ renderModeString = Switch(
+ switchRenderMode,
+ "software",
+ "hardware")[instance: 9, cache: 1];
+ object_tag = Inquire(
+ object,
+ "object tag")[instance: 3, cache: 1];
+ annoted_object =
+ Options(
+ object,
+ "send boxes",
+ 0,
+ "cache",
+ 1,
+ "object tag",
+ object_tag,
+ "ddcamera",
+ whichCamera,
+ "rendering approximation",
+ approximation_options,
+ "render every",
+ density_options,
+ "button state",
+ buttonState,
+ "rendering mode",
+ renderModeString) [instance: 1, cache: 1];
+ RECresNull =
+ Inquire(
+ RECresolution,
+ "is null + 1") [instance: 4, cache: 1];
+ ImageResolution =
+ Inquire(
+ camera,
+ "camera resolution") [instance: 5, cache: 1];
+ RECresolution =
+ Switch(
+ RECresNull,
+ RECresolution,
+ ImageResolution) [instance: 10, cache: 1];
+ RECaspectNull =
+ Inquire(
+ RECaspect,
+ "is null + 1") [instance: 6, cache: 1];
+ ImageAspect =
+ Inquire(
+ camera,
+ "camera aspect") [instance: 7, cache: 1];
+ RECaspect =
+ Switch(
+ RECaspectNull,
+ RECaspect,
+ ImageAspect) [instance: 11, cache: 1];
+ switchRECenable = Compute(
+ "$0 == 0 ? 1 : (($2 == $3) && ($4 == $5)) ? ($1 == 1 ? 2 : 3) : 4",
+ RECenable,
+ switchRenderMode,
+ RECresolution,
+ ImageResolution,
+ RECaspect,
+ ImageAspect) [instance: 4, cache: 1];
+ NoRECobject, RECNoRerenderObject, RECNoRerHW, RECRerenderObject = Route(switchRECenable, annoted_object);
+ Display(
+ NoRECobject,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 1];
+ image =
+ Render(
+ RECNoRerenderObject,
+ camera) [instance: 1, cache: 1];
+ Display(
+ image,
+ NULL,
+ where,
+ throttle) [instance: 2, cache: 1];
+ WriteImage(
+ image,
+ RECfile,
+ RECformat) [instance: 1, cache: 1];
+ rec_where = Display(
+ RECNoRerHW,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 0];
+ rec_image = ReadImageWindow(
+ rec_where) [instance: 1, cache: 1];
+ WriteImage(
+ rec_image,
+ RECfile,
+ RECformat) [instance: 1, cache: 1];
+ RECupdateCamera =
+ UpdateCamera(
+ camera,
+ resolution=RECresolution,
+ aspect=RECaspect) [instance: 2, cache: 1];
+ Display(
+ RECRerenderObject,
+ camera,
+ where,
+ throttle) [instance: 1, cache: 1];
+ RECRerenderObject =
+ ScaleScreen(
+ RECRerenderObject,
+ NULL,
+ RECresolution,
+ camera) [instance: 1, cache: 1];
+ image =
+ Render(
+ RECRerenderObject,
+ RECupdateCamera) [instance: 2, cache: 1];
+ WriteImage(
+ image,
+ RECfile,
+ RECformat) [instance: 2, cache: 1];
+}
+main_Image_2_in_1 = "Image_2";
+main_Image_2_in_3 = "X24,,";
+main_Image_2_in_4 = 1;
+main_Image_2_in_5 = [360000 130000 -9842.12];
+main_Image_2_in_6 = [293951 33251.2 58936.7];
+main_Image_2_in_7 = 72798.2;
+main_Image_2_in_8 = 711;
+main_Image_2_in_9 = 0.85443;
+main_Image_2_in_10 = [0.244732 0.445238 0.861319];
+main_Image_2_in_11 = NULL;
+main_Image_2_in_12 = 0;
+main_Image_2_in_13 = NULL;
+main_Image_2_in_14 = 1;
+main_Image_2_in_15 = "none";
+main_Image_2_in_16 = "none";
+main_Image_2_in_17 = 1;
+main_Image_2_in_18 = 1;
+main_Image_2_in_19 = 1;
+main_Image_2_in_20 = NULL;
+main_Image_2_in_21 = NULL;
+main_Image_2_in_22 = "black";
+main_Image_2_in_23 = NULL;
+main_Image_2_in_25 = "/home/latychev/boo";
+main_Image_2_in_26 = "eps gray dpi=86 orient=portrait";
+main_Image_2_in_27 = NULL;
+main_Image_2_in_28 = NULL;
+main_Image_2_in_29 = 0;
+main_Image_2_in_30 = NULL;
+main_Image_2_in_31 = NULL;
+main_Image_2_in_32 = NULL;
+main_Image_2_in_33 = 1;
+main_Image_2_in_34 = NULL;
+main_Image_2_in_35 = NULL;
+main_Image_2_in_36 = 1;
+main_Image_2_in_37 = NULL;
+main_Image_2_in_38 = NULL;
+main_Image_2_in_39 = NULL;
+main_Image_2_in_40 = NULL;
+main_Image_2_in_41 = "rotate";
+main_Image_2_in_42 = NULL;
+main_Image_2_in_43 = NULL;
+main_Image_2_in_44 = NULL;
+main_Image_2_in_45 = NULL;
+main_Image_2_in_46 = NULL;
+main_Image_2_in_47 = NULL;
+main_Image_2_in_48 = NULL;
+main_Image_2_in_49 = NULL;
+Executive("product version 4 3 2");
+$sync
+main();
Deleted: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/create_record_section_Grace.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/create_record_section_Grace.f90 2010-02-20 19:47:34 UTC (rev 16283)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/create_record_section_Grace.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -1,84 +0,0 @@
-
- program create_record_section_Grace
-
-! creates files to plot record sections with "Grace"
-! then call with " xmgrace *.sem.recordsection "
-! call this program with " xcreate_record_section_Grace < create_record_section_Grace.in "
-
-! Authors: Jeroen Tromp and Dimitri Komatitsch, mid-2000 and September 2007
-
- implicit none
-
-! total number of time steps in each seismogram
- integer, parameter :: NSTEP = 41030
-
-! total number of seismic stations (receivers)
- integer, parameter :: NSTATIONS = 180
-
- integer :: it,irec
-
- real :: epi,epi_start,epi_end,max_amp,t_start,t_end,scale,enhance
-
- real, dimension(NSTEP) :: time_sem,sem
-
- character(len=3) component
- character(len=150) station
-
- print *,'component (LHZ, LHE, or LHN): '
- read *,component
-
- print *,'starting epicentral distance (degrees):'
- read *,epi_start
-
- print *,'ending epicentral distance (degrees):'
- read *,epi_end
-
- print *,'starting time in record section (minutes):'
- read *,t_start
-
- print *,'ending in record section (minutes):'
- read *,t_end
-
- print *,'enhancement factor:'
- read *,enhance
-
-! open the station file
- open(unit=1,file='output_list_stations.txt',status='unknown')
-
- do irec = 1,NSTATIONS
-
- read(1,*) station,epi
-
- print *,'processing file ',irec,' out of ',NSTATIONS
-
- if(epi >= epi_start .and. epi <= epi_end) then
-
- max_amp = -100000.
-
-! read a given seismogram
- open(unit=10,file=station(1:len_trim(station))//'.'//component(1:3)//'.semd.ascii.convolved',status='old')
- do it = 1,NSTEP
- read(10,*) time_sem(it),sem(it)
-! compute maximum of all the traces
- if(time_sem(it)/60.0 >= t_start .and. time_sem(it)/60.0 <= t_end .and. abs(sem(it)) > max_amp) max_amp = abs(sem(it))
- enddo
- close(10)
-
-! compute scaling factor to plot the traces
- scale = enhance/max_amp
-
-! open the record section file
- open(unit=10,file=station(1:len_trim(station))//'.'//component(1:3)//'.sem.recordsection',status='unknown')
- do it = 1,NSTEP
- if(time_sem(it)/60.0 >= t_start .and. time_sem(it)/60.0 <= t_end) write(10,*) time_sem(it)/60.0,epi+sem(it)*scale
- enddo
- close(10)
-
- endif
-
- enddo
-
- close(1)
-
- end program create_record_section_Grace
-
Deleted: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/create_record_section_Grace.in
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/create_record_section_Grace.in 2010-02-20 19:47:34 UTC (rev 16283)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/create_record_section_Grace.in 2010-02-20 19:58:48 UTC (rev 16284)
@@ -1,6 +0,0 @@
-LHZ
-89.
-180.5
-0.0
-30.0
-7
Deleted: seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/draw_regular_2D_GLL_element_gnuplot.f90
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/draw_regular_2D_GLL_element_gnuplot.f90 2010-02-20 19:47:34 UTC (rev 16283)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/UTILS/draw_regular_2D_GLL_element_gnuplot.f90 2010-02-20 19:58:48 UTC (rev 16284)
@@ -1,650 +0,0 @@
-
- program draw_regular_GLL_element
-
-! for articles or presentations, draw regular 2D GLL element using Gnuplot
-! Author: Dimitri Komatitsch
-
- implicit none
-
-! number of spatial dimensions
- integer, parameter :: NDIM = 2
-
-! number of GLL points
- integer, parameter :: NGLLX = 5
- integer, parameter :: NGLLY = NGLLX
-
-! for the Gauss-Lobatto-Legendre points and weights
- double precision, parameter :: GAUSSALPHA = 0.d0,GAUSSBETA = 0.d0
-
- double precision, dimension(NDIM,NGLLX,NGLLY) :: coord
-
-! Gauss-Lobatto-Legendre points and weights of integration
- double precision, dimension(NGLLX) :: xigll,wxgll
- double precision, dimension(NGLLY) :: yigll,wygll
-
- integer ix,iy
-
-! set up coordinates of the Gauss-Lobatto-Legendre points
- call zwgljd(xigll,wxgll,NGLLX,GAUSSALPHA,GAUSSBETA)
- call zwgljd(yigll,wygll,NGLLY,GAUSSALPHA,GAUSSBETA)
-
-! define the GLL coordinates of the reference element
- do iy = 1,NGLLY
- do ix = 1,NGLLX
- coord(1,ix,iy) = xigll(ix)
- coord(2,ix,iy) = yigll(iy)
- enddo
- enddo
-
-!
-!---- print the GLL mesh in a Gnuplot file
-!
-
- write(*,*)
- write(*,*) 'Generating gnuplot mesh...'
- write(*,*)
-
- open(unit=20,file='gllfullmesh.gnu',status='unknown')
- open(unit=21,file='gllmeshedges.gnu',status='unknown')
-
-!
-!---- plot the lines in the xi-direction
-!
- do iy = 1,NGLLY
- do ix = 1,NGLLX-1
-
- write(20,*) sngl(coord(1,ix,iy)),sngl(coord(2,ix,iy))
- write(20,*) sngl(coord(1,ix+1,iy)),sngl(coord(2,ix+1,iy))
- write(20,"('')")
-
- if(iy == 1 .or. iy == NGLLY) then
- write(21,*) sngl(coord(1,ix,iy)),sngl(coord(2,ix,iy))
- write(21,*) sngl(coord(1,ix+1,iy)),sngl(coord(2,ix+1,iy))
- write(21,"('')")
- endif
-
- enddo
- enddo
-
-!
-!---- plot the lines in the eta-direction
-!
- do ix = 1,NGLLX
- do iy = 1,NGLLY-1
-
- write(20,*) sngl(coord(1,ix,iy)),sngl(coord(2,ix,iy))
- write(20,*) sngl(coord(1,ix,iy+1)),sngl(coord(2,ix,iy+1))
- write(20,"('')")
-
- if(ix == 1 .or. ix == NGLLX) then
- write(21,*) sngl(coord(1,ix,iy)),sngl(coord(2,ix,iy))
- write(21,*) sngl(coord(1,ix,iy+1)),sngl(coord(2,ix,iy+1))
- write(21,"('')")
- endif
-
- enddo
- enddo
-
- close(20)
- close(21)
-
-!
-!---- generate the command file for Gnuplot
-!
- open(unit=20,file='plotall.gnu',status='unknown')
-
-! write postscript script
- write(20,*) 'set term postscript eps monochrome dashed "Helvetica" 22'
- write(20,*) 'set output "grid_GLL.eps"'
- write(20,*) 'set size square'
- write(20,*) 'set noborder'
- write(20,*) 'set nogrid'
- write(20,*) 'set nozeroaxis'
- write(20,*) 'set noxtics'
- write(20,*) 'set noytics'
- write(20,*) 'plot "gllfullmesh.gnu" title '''' w linesp 2 4, "gllmeshedges.gnu" title '''' w l 1'
-
-! write X11 script
-! write(20,*) 'set term x11'
-! write(20,*) 'set xlabel "X"'
-! write(20,*) 'set ylabel "Y"'
-! write(20,*) 'set title "Gauss-Lobatto-Legendre Mesh"'
-! write(20,*) 'plot "gllfullmesh.gnu" title '''' w l 2, "gllmeshedges.gnu" title '''' w linesp 1 3'
-! write(20,*) 'pause -1 "Hit any key"'
-
- close(20)
-
- end program draw_regular_GLL_element
-
-!*************************************************************
-!*************************************************************
-!*************************************************************
-
-!=======================================================================
-!
-! Library to compute the Gauss-Lobatto-Legendre points and weights
-! Based on Gauss-Lobatto routines from M.I.T.
-! Department of Mechanical Engineering
-!
-!=======================================================================
-
- double precision function endw1(n,alpha,beta)
-
- implicit none
-
- integer n
- double precision alpha,beta
-
- double precision, parameter :: zero=0.d0,one=1.d0,two=2.d0,three=3.d0,four=4.d0
- double precision apb,f1,fint1,fint2,f2,di,abn,abnn,a1,a2,a3,f3
- double precision, external :: gammaf
- integer i
-
- f3 = zero
- apb = alpha+beta
- if (n == 0) then
- endw1 = zero
- return
- endif
- f1 = gammaf(alpha+two)*gammaf(beta+one)/gammaf(apb+three)
- f1 = f1*(apb+two)*two**(apb+two)/two
- if (n == 1) then
- endw1 = f1
- return
- endif
- fint1 = gammaf(alpha+two)*gammaf(beta+one)/gammaf(apb+three)
- fint1 = fint1*two**(apb+two)
- fint2 = gammaf(alpha+two)*gammaf(beta+two)/gammaf(apb+four)
- fint2 = fint2*two**(apb+three)
- f2 = (-two*(beta+two)*fint1 + (apb+four)*fint2) * (apb+three)/four
- if (n == 2) then
- endw1 = f2
- return
- endif
- do i=3,n
- di = dble(i-1)
- abn = alpha+beta+di
- abnn = abn+di
- a1 = -(two*(di+alpha)*(di+beta))/(abn*abnn*(abnn+one))
- a2 = (two*(alpha-beta))/(abnn*(abnn+two))
- a3 = (two*(abn+one))/((abnn+two)*(abnn+one))
- f3 = -(a2*f2+a1*f1)/a3
- f1 = f2
- f2 = f3
- enddo
- endw1 = f3
-
- end function endw1
-
-!
-!=======================================================================
-!
-
- double precision function endw2(n,alpha,beta)
-
- implicit none
-
- integer n
- double precision alpha,beta
-
- double precision, parameter :: zero=0.d0,one=1.d0,two=2.d0,three=3.d0,four=4.d0
- double precision apb,f1,fint1,fint2,f2,di,abn,abnn,a1,a2,a3,f3
- double precision, external :: gammaf
- integer i
-
- apb = alpha+beta
- f3 = zero
- if (n == 0) then
- endw2 = zero
- return
- endif
- f1 = gammaf(alpha+one)*gammaf(beta+two)/gammaf(apb+three)
- f1 = f1*(apb+two)*two**(apb+two)/two
- if (n == 1) then
- endw2 = f1
- return
- endif
- fint1 = gammaf(alpha+one)*gammaf(beta+two)/gammaf(apb+three)
- fint1 = fint1*two**(apb+two)
- fint2 = gammaf(alpha+two)*gammaf(beta+two)/gammaf(apb+four)
- fint2 = fint2*two**(apb+three)
- f2 = (two*(alpha+two)*fint1 - (apb+four)*fint2) * (apb+three)/four
- if (n == 2) then
- endw2 = f2
- return
- endif
- do i=3,n
- di = dble(i-1)
- abn = alpha+beta+di
- abnn = abn+di
- a1 = -(two*(di+alpha)*(di+beta))/(abn*abnn*(abnn+one))
- a2 = (two*(alpha-beta))/(abnn*(abnn+two))
- a3 = (two*(abn+one))/((abnn+two)*(abnn+one))
- f3 = -(a2*f2+a1*f1)/a3
- f1 = f2
- f2 = f3
- enddo
- endw2 = f3
-
- end function endw2
-
-!
-!=======================================================================
-!
-
- double precision function gammaf (x)
-
- implicit none
-
- double precision, parameter :: pi = 3.141592653589793d0
-
- double precision x
-
- double precision, parameter :: half=0.5d0,one=1.d0,two=2.d0
-
- gammaf = one
-
- if (x == -half) gammaf = -two*dsqrt(pi)
- if (x == half) gammaf = dsqrt(pi)
- if (x == one ) gammaf = one
- if (x == two ) gammaf = one
- if (x == 1.5d0) gammaf = dsqrt(pi)/2.d0
- if (x == 2.5d0) gammaf = 1.5d0*dsqrt(pi)/2.d0
- if (x == 3.5d0) gammaf = 2.5d0*1.5d0*dsqrt(pi)/2.d0
- if (x == 3.d0 ) gammaf = 2.d0
- if (x == 4.d0 ) gammaf = 6.d0
- if (x == 5.d0 ) gammaf = 24.d0
- if (x == 6.d0 ) gammaf = 120.d0
-
- end function gammaf
-
-!
-!=====================================================================
-!
-
- subroutine jacg (xjac,np,alpha,beta)
-
-!=======================================================================
-!
-! computes np Gauss points, which are the zeros of the
-! Jacobi polynomial with parameters alpha and beta
-!
-! .alpha = beta = 0.0 -> Legendre points
-! .alpha = beta = -0.5 -> Chebyshev points
-!
-!=======================================================================
-
- implicit none
-
- integer np
- double precision alpha,beta
- double precision xjac(np)
-
- integer k,j,i,jmin,jm,n
- double precision xlast,dth,x,x1,x2,recsum,delx,xmin,swap
- double precision p,pd,pm1,pdm1,pm2,pdm2
-
- integer, parameter :: K_MAX_ITER = 10
- double precision, parameter :: zero = 0.d0, eps = 1.0d-12
-
- pm1 = zero
- pm2 = zero
- pdm1 = zero
- pdm2 = zero
-
- xlast = 0.d0
- n = np-1
- dth = 4.d0*datan(1.d0)/(2.d0*dble(n)+2.d0)
- p = 0.d0
- pd = 0.d0
- jmin = 0
- do j=1,np
- if(j == 1) then
- x = dcos((2.d0*(dble(j)-1.d0)+1.d0)*dth)
- else
- x1 = dcos((2.d0*(dble(j)-1.d0)+1.d0)*dth)
- x2 = xlast
- x = (x1+x2)/2.d0
- endif
- do k=1,K_MAX_ITER
- call jacobf (p,pd,pm1,pdm1,pm2,pdm2,np,alpha,beta,x)
- recsum = 0.d0
- jm = j-1
- do i=1,jm
- recsum = recsum+1.d0/(x-xjac(np-i+1))
- enddo
- delx = -p/(pd-recsum*p)
- x = x+delx
- if(abs(delx) < eps) goto 31
- enddo
- 31 continue
- xjac(np-j+1) = x
- xlast = x
- enddo
- do i=1,np
- xmin = 2.d0
- do j=i,np
- if(xjac(j) < xmin) then
- xmin = xjac(j)
- jmin = j
- endif
- enddo
- if(jmin /= i) then
- swap = xjac(i)
- xjac(i) = xjac(jmin)
- xjac(jmin) = swap
- endif
- enddo
-
- end subroutine jacg
-
-!
-!=====================================================================
-!
-
- subroutine jacobf (poly,pder,polym1,pderm1,polym2,pderm2,n,alp,bet,x)
-
-!=======================================================================
-!
-! Computes the Jacobi polynomial of degree n and its derivative at x
-!
-!=======================================================================
-
- implicit none
-
- double precision poly,pder,polym1,pderm1,polym2,pderm2,alp,bet,x
- integer n
-
- double precision apb,polyl,pderl,dk,a1,a2,b3,a3,a4,polyn,pdern,psave,pdsave
- integer k
-
- apb = alp+bet
- poly = 1.d0
- pder = 0.d0
- psave = 0.d0
- pdsave = 0.d0
-
- if (n == 0) return
-
- polyl = poly
- pderl = pder
- poly = (alp-bet+(apb+2.d0)*x)/2.d0
- pder = (apb+2.d0)/2.d0
- if (n == 1) return
-
- do k=2,n
- dk = dble(k)
- a1 = 2.d0*dk*(dk+apb)*(2.d0*dk+apb-2.d0)
- a2 = (2.d0*dk+apb-1.d0)*(alp**2-bet**2)
- b3 = (2.d0*dk+apb-2.d0)
- a3 = b3*(b3+1.d0)*(b3+2.d0)
- a4 = 2.d0*(dk+alp-1.d0)*(dk+bet-1.d0)*(2.d0*dk+apb)
- polyn = ((a2+a3*x)*poly-a4*polyl)/a1
- pdern = ((a2+a3*x)*pder-a4*pderl+a3*poly)/a1
- psave = polyl
- pdsave = pderl
- polyl = poly
- poly = polyn
- pderl = pder
- pder = pdern
- enddo
-
- polym1 = polyl
- pderm1 = pderl
- polym2 = psave
- pderm2 = pdsave
-
- end subroutine jacobf
-
-!
-!------------------------------------------------------------------------
-!
-
- double precision FUNCTION PNDLEG (Z,N)
-
-!------------------------------------------------------------------------
-!
-! Compute the derivative of the Nth order Legendre polynomial at Z.
-! Based on the recursion formula for the Legendre polynomials.
-!
-!------------------------------------------------------------------------
- implicit none
-
- double precision z
- integer n
-
- double precision P1,P2,P1D,P2D,P3D,FK,P3
- integer k
-
- P1 = 1.d0
- P2 = Z
- P1D = 0.d0
- P2D = 1.d0
- P3D = 1.d0
-
- do K = 1, N-1
- FK = dble(K)
- P3 = ((2.d0*FK+1.d0)*Z*P2 - FK*P1)/(FK+1.d0)
- P3D = ((2.d0*FK+1.d0)*P2 + (2.d0*FK+1.d0)*Z*P2D - FK*P1D) / (FK+1.d0)
- P1 = P2
- P2 = P3
- P1D = P2D
- P2D = P3D
- enddo
-
- PNDLEG = P3D
-
- end function pndleg
-
-!
-!------------------------------------------------------------------------
-!
-
- double precision FUNCTION PNLEG (Z,N)
-
-!------------------------------------------------------------------------
-!
-! Compute the value of the Nth order Legendre polynomial at Z.
-! Based on the recursion formula for the Legendre polynomials.
-!
-!------------------------------------------------------------------------
- implicit none
-
- double precision z
- integer n
-
- double precision P1,P2,P3,FK
- integer k
-
- P1 = 1.d0
- P2 = Z
- P3 = P2
-
- do K = 1, N-1
- FK = dble(K)
- P3 = ((2.d0*FK+1.d0)*Z*P2 - FK*P1)/(FK+1.d0)
- P1 = P2
- P2 = P3
- enddo
-
- PNLEG = P3
-
- end function pnleg
-
-!
-!------------------------------------------------------------------------
-!
-
- double precision function pnormj (n,alpha,beta)
-
- implicit none
-
- double precision alpha,beta
- integer n
-
- double precision one,two,dn,const,prod,dindx,frac
- double precision, external :: gammaf
- integer i
-
- one = 1.d0
- two = 2.d0
- dn = dble(n)
- const = alpha+beta+one
-
- if (n <= 1) then
- prod = gammaf(dn+alpha)*gammaf(dn+beta)
- prod = prod/(gammaf(dn)*gammaf(dn+alpha+beta))
- pnormj = prod * two**const/(two*dn+const)
- return
- endif
-
- prod = gammaf(alpha+one)*gammaf(beta+one)
- prod = prod/(two*(one+const)*gammaf(const+one))
- prod = prod*(one+alpha)*(two+alpha)
- prod = prod*(one+beta)*(two+beta)
-
- do i=3,n
- dindx = dble(i)
- frac = (dindx+alpha)*(dindx+beta)/(dindx*(dindx+alpha+beta))
- prod = prod*frac
- enddo
-
- pnormj = prod * two**const/(two*dn+const)
-
- end function pnormj
-
-!
-!------------------------------------------------------------------------
-!
-
- subroutine zwgjd(z,w,np,alpha,beta)
-
-!=======================================================================
-!
-! Z w g j d : Generate np Gauss-Jacobi points and weights
-! associated with Jacobi polynomial of degree n = np-1
-!
-! Note : Coefficients alpha and beta must be greater than -1.
-! ----
-!=======================================================================
-
- implicit none
-
- double precision, parameter :: zero=0.d0,one=1.d0,two=2.d0
-
- integer np
- double precision z(np),w(np)
- double precision alpha,beta
-
- integer n,np1,np2,i
- double precision p,pd,pm1,pdm1,pm2,pdm2
- double precision apb,dnp1,dnp2,fac1,fac2,fac3,fnorm,rcoef
- double precision, external :: gammaf,pnormj
-
- pd = zero
- pm1 = zero
- pm2 = zero
- pdm1 = zero
- pdm2 = zero
-
- n = np-1
- apb = alpha+beta
- p = zero
- pdm1 = zero
-
- if (np <= 0) stop 'minimum number of Gauss points is 1'
-
- if ((alpha <= -one) .or. (beta <= -one)) stop 'alpha and beta must be greater than -1'
-
- if (np == 1) then
- z(1) = (beta-alpha)/(apb+two)
- w(1) = gammaf(alpha+one)*gammaf(beta+one)/gammaf(apb+two) * two**(apb+one)
- return
- endif
-
- call jacg(z,np,alpha,beta)
-
- np1 = n+1
- np2 = n+2
- dnp1 = dble(np1)
- dnp2 = dble(np2)
- fac1 = dnp1+alpha+beta+one
- fac2 = fac1+dnp1
- fac3 = fac2+one
- fnorm = pnormj(np1,alpha,beta)
- rcoef = (fnorm*fac2*fac3)/(two*fac1*dnp2)
- do i=1,np
- call jacobf(p,pd,pm1,pdm1,pm2,pdm2,np2,alpha,beta,z(i))
- w(i) = -rcoef/(p*pdm1)
- enddo
-
- end subroutine zwgjd
-
-!
-!------------------------------------------------------------------------
-!
-
- subroutine zwgljd(z,w,np,alpha,beta)
-
-!=======================================================================
-!
-! Z w g l j d : Generate np Gauss-Lobatto-Jacobi points and the
-! ----------- weights associated with Jacobi polynomials of degree
-! n = np-1.
-!
-! Note : alpha and beta coefficients must be greater than -1.
-! Legendre polynomials are special case of Jacobi polynomials
-! just by setting alpha and beta to 0.
-!
-!=======================================================================
-
- implicit none
-
- double precision, parameter :: zero=0.d0,one=1.d0,two=2.d0
-
- integer np
- double precision alpha,beta
- double precision z(np), w(np)
-
- integer n,nm1,i
- double precision p,pd,pm1,pdm1,pm2,pdm2
- double precision alpg,betg
- double precision, external :: endw1,endw2
-
- p = zero
- pm1 = zero
- pm2 = zero
- pdm1 = zero
- pdm2 = zero
-
- n = np-1
- nm1 = n-1
- pd = zero
-
- if (np <= 1) stop 'minimum number of Gauss-Lobatto points is 2'
-
-! with spectral elements, use at least 3 points
- if (np <= 2) stop 'minimum number of Gauss-Lobatto points for the SEM is 3'
-
- if ((alpha <= -one) .or. (beta <= -one)) stop 'alpha and beta must be greater than -1'
-
- if (nm1 > 0) then
- alpg = alpha+one
- betg = beta+one
- call zwgjd(z(2),w(2),nm1,alpg,betg)
- endif
-
- z(1) = - one
- z(np) = one
-
- do i=2,np-1
- w(i) = w(i)/(one-z(i)**2)
- enddo
-
- call jacobf(p,pd,pm1,pdm1,pm2,pdm2,n,alpha,beta,z(1))
- w(1) = endw1(n,alpha,beta)/(two*pd)
- call jacobf(p,pd,pm1,pdm1,pm2,pdm2,n,alpha,beta,z(np))
- w(np) = endw2(n,alpha,beta)/(two*pd)
-
- end subroutine zwgljd
-
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