[cig-commits] r16299 - in seismo/3D: SPECFEM3D_GLOBE/trunk/USER_MANUAL SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures SPECFEM3D_SESAME/trunk/USER_MANUAL

dkomati1 at geodynamics.org dkomati1 at geodynamics.org
Sun Feb 21 11:26:59 PST 2010


Author: dkomati1
Date: 2010-02-21 11:26:58 -0800 (Sun, 21 Feb 2010)
New Revision: 16299

Added:
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/CNRS_fr_logo.jpg
Modified:
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/bibliography.bib
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/PKPdf_all_15s500s.pdf
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/bolivia_trans.pdf
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/bolivia_vertical.pdf
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/specfem_3d_globe-cover.pdf
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/specfem_3d_globe-cover.psd
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/vanuatu_trans.pdf
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/vanuatu_vertical.pdf
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/manual_SPECFEM3D_GLOBE.pdf
   seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/manual_SPECFEM3D_GLOBE.tex
   seismo/3D/SPECFEM3D_SESAME/trunk/USER_MANUAL/bibliography.bib
Log:
done modifying the manuals


Modified: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/bibliography.bib
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/bibliography.bib	2010-02-21 19:10:13 UTC (rev 16298)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/bibliography.bib	2010-02-21 19:26:58 UTC (rev 16299)
@@ -204,26 +204,6 @@
   address = {San Francisco, USA}
 }
 
- at ARTICLE{DaEkDz08,
-  author = {C.A. Dalton, G. Ekstr\"{o}m and A.M. Dziewonski},
-  title = {The global attenuation structure of the upper mantle},
-  journal = jgr,
-  year = {2008},
-  volume = {113},
-  pages = {B05317},
-  doi = {10.1029/2006JB004394}
-}
-
- at ARTICLE{ChTrHeKa07,
-  author = {M. Chen and J. Tromp and D. Helmberger and H. Kanamori},
-  title = {Waveform modeling of the slab beneath {J}apan},
-  journal = jgr,
-  year = {2007},
-  volume = {112},
-  pages = {B02305},
-  doi = {10.1029/2006JB004394}
-}
-
 @ARTICLE{AlWo08,
   author = {David Al-Attar and John H. Woodhouse},
   title = {Calculation of seismic displacement fields in self-gravitating earth
@@ -1891,6 +1871,16 @@
   number = {2}
 }
 
+ at ARTICLE{DaEkDz08,
+  author = {C.A. Dalton, G. Ekstr\"{o}m and A.M. Dziewonski},
+  title = {The global attenuation structure of the upper mantle},
+  journal = jgr,
+  year = {2008},
+  volume = {113},
+  pages = {B05317},
+  doi = {10.1029/2006JB004394}
+}
+
 @BOOK{Cag39,
   title = {R\'eflexion et R\'efraction des Ondes Sismiques Progressives},
   publisher = {Gauthiers-Villars},
@@ -2545,6 +2535,16 @@
   doi = {10.1111/j.1365-246X.2006.03218.x}
 }
 
+ at ARTICLE{ChTrHeKa07,
+  author = {M. Chen and J. Tromp and D. Helmberger and H. Kanamori},
+  title = {Waveform modeling of the slab beneath {J}apan},
+  journal = jgr,
+  year = {2007},
+  volume = {112},
+  pages = {B02305},
+  doi = {10.1029/2006JB004394}
+}
+
 @ARTICLE{ChenBabu96,
   author = {Q. Chen and I. Babu{\v s}ka},
   title = {The optimal symmetrical points for polynomial interpolation of real
@@ -7012,6 +7012,14 @@
   doi = {10.1002/(SICI)1097-0207(19990730)45:9<1139::AID-NME617>3.0.CO;2-T}
 }
 
+ at ARTICLE{KoViCh10,
+  author = {D. Komatitsch and L. P. Vinnik and S. Chevrot},
+  title = {{SH}diff/{SV}diff splitting in an isotropic {E}arth},
+  journal = jgr,
+  year = {2010},
+  note = {in press.}
+}
+
 @ARTICLE{Komornik,
   author = {V. Komornik},
   title = {Stabilisation fronti\`ere des \'equations de {M}axwell},
@@ -7734,12 +7742,16 @@
   number = {4}
 }
 
- at MISC{Liu06b,
+ at ARTICLE{LiTr08,
   author = {Q. Liu and J. Tromp},
   title = {Finite-frequency sensitivity kernels for global seismic wave propagation
 	based upon adjoint methods},
-  year = {2007},
-  note = {in preparation}
+  journal = gji,
+  year = {2008},
+  volume = {174},
+  pages = {265-286},
+  number = {1},
+  doi = {10.1111/j.1365-246X.2008.03798.x}
 }
 
 @ARTICLE{LiTr06,
@@ -7828,6 +7840,16 @@
   address = {Cambridge}
 }
 
+ at ARTICLE{lovelyetal06,
+  author = {P. Lovely and J. Shaw and Q. Liu and J. Tromp},
+  title = {A structural model of the {S}alton {T}rough and its implications
+	for seismic hazard},
+  journal = bssa,
+  year = {2006},
+  volume = {96},
+  pages = {1882-1896}
+}
+
 @ARTICLE{LuPaXu05,
   author = {Jing Lu and Jie Pan and Boling Xu},
   title = {Time-domain calculation of acoustical wave propagation in discontinuous
@@ -12252,6 +12274,16 @@
   pages = {337-356}
 }
 
+ at ARTICLE{WaHe94,
+  author = {D. J. Wald and T. H. Heaton},
+  title = {Spatial and temporal distribution of slip for the 1992 {L}anders,
+	{C}alifornia Earthquake},
+  journal = bssa,
+  year = {1994},
+  volume = {84},
+  pages = {668-691}
+}
+
 @ARTICLE{WaHeHu96,
   author = {D. J. Wald and T. H. Heaton and K. W. Hudnut},
   title = {The slip history of the 1994 {N}orthridge, {C}alifornia, earthquake
@@ -12263,14 +12295,6 @@
   pages = {S49-S70}
 }
 
- at ARTICLE{KoViCh10,
-  author = {D. Komatitsch and L. P. Vinnik and S. Chevrot},
-  title = {{SH}diff/{SV}diff splitting in an isotropic {E}arth},
-  journal = jgr,
-  year = {2010},
-  note = {in press.}
-}
-
 @ARTICLE{WanAch96,
   author = {C. Y. Wang and J. D. Achenbach},
   title = {Lamb's problem for solids of general anisotropy},

Added: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/CNRS_fr_logo.jpg
===================================================================
(Binary files differ)


Property changes on: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/CNRS_fr_logo.jpg
___________________________________________________________________
Name: svn:mime-type
   + application/octet-stream

Modified: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/PKPdf_all_15s500s.pdf
===================================================================
(Binary files differ)

Modified: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/bolivia_trans.pdf
===================================================================
(Binary files differ)

Modified: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/bolivia_vertical.pdf
===================================================================
(Binary files differ)

Modified: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/specfem_3d_globe-cover.pdf
===================================================================
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Modified: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/specfem_3d_globe-cover.psd
===================================================================
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Modified: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/vanuatu_trans.pdf
===================================================================
(Binary files differ)

Modified: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/figures/vanuatu_vertical.pdf
===================================================================
(Binary files differ)

Modified: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/manual_SPECFEM3D_GLOBE.pdf
===================================================================
(Binary files differ)

Modified: seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/manual_SPECFEM3D_GLOBE.tex
===================================================================
--- seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/manual_SPECFEM3D_GLOBE.tex	2010-02-21 19:10:13 UTC (rev 16298)
+++ seismo/3D/SPECFEM3D_GLOBE/trunk/USER_MANUAL/manual_SPECFEM3D_GLOBE.tex	2010-02-21 19:26:58 UTC (rev 16299)
@@ -97,7 +97,7 @@
 \textbf{User Manual}}
 
 
-\author{� California Institute of Technology (USA) and\\
+\author{$\copyright$ California Institute of Technology (USA) and\\
 University of Pau / CNRS / INRIA (France)\\
 Version 5.0.0 `Tiger'}
 
@@ -121,7 +121,7 @@
 The package can accommodate full 21-parameter anisotropy \citep{ChTr07}
 as well as lateral variations in attenuation \citep{SavWiTr05}. Adjoint
 capabilities and finite-frequency kernel simulations are also included
-\citep{LiTr06,LiTr08}.
+\citep{LiTr06,TrKoLi08,LiTr08}.
 
 All SPECFEM3D\_GLOBE software is written in Fortran90 with full portability
 in mind, and conforms strictly to the Fortran95 standard. It uses
@@ -136,6 +136,9 @@
 and the Gordon Bell Awards News Release \url{www.sc-conference.org/sc2003/nr_finalaward.html }
 for details. It was a finalist again in 2008 for a run at 0.16 petaflops (sustained) on 149,784 processors of the `Jaguar' Cray XT5 system at Oak Ridge National Laboratories (USA) \citep{CaKoLaTiMiLeSnTr08}.
 
+Future improvements will include support for GPU graphics card acceleration \citep{KoMiEr09,KoErGoMi10,MiKo10}
+as well as Convolutional-Perfectly Matched absorbing Layers (C-PML) \citep{KoMa07}.
+
 \section{Citation}
 
 If you use SPECFEM3D\_GLOBE for your own research, please cite at
@@ -1498,7 +1501,7 @@
 \citep{LayKanamoriAmmon2005,AmmonJiThio2005,ParkSongTromp2005}. Second,
 they can be used to generate finite-frequency sensitivity kernels
 that are a critical part of tomographic inversions based upon 3D reference
-models \citep{trompetal2005,LiTr06,LiTr08}. In either case, source
+models \citep{trompetal2005,LiTr06,TrKoLi08,LiTr08}. In either case, source
 parameter or velocity structure updates are sought to minimize a specific
 misfit function (e.g., waveform or traveltime differences), and the
 adjoint simulation provides a means of computing the gradient of the
@@ -1591,7 +1594,7 @@
 Kernels (Kernel Simulation)}
 
 Finite-frequency sensitivity kernels are computed in two successive
-simulations (please refer to \citet{LiTr06} for details).
+simulations (please refer to \citet{LiTr06} and \citet{TrKoLi08} for details).
 
 \begin{enumerate}
 \item \textbf{Run a forward simulation with the state variables saved at
@@ -1949,7 +1952,7 @@
 \item \textbf{Combine kernel files into one mesh file}
 
 
-We use an auxilliary program \texttt{combine\_vol\_data.f90} to combine
+We use an auxiliary program \texttt{combine\_vol\_data.f90} to combine
 the volumetric kernel files from all slices into one mesh file, and
 \texttt{combine\_surf\_data.f90 }to combine the surface kernel files.
 
@@ -2753,14 +2756,14 @@
 platform.{\small{} }{\small \par}
 
 The main developers of the \texttt{SPECFEM3D\_GLOBE} source code are
-Dimitri Komatitsch, Jeroen Tromp, Qinya Liu and David Mich�a. The
+Dimitri Komatitsch, Jeroen Tromp, Qinya Liu and David Mich\'ea. The
 following individuals (listed in alphabetical order) have also contributed
-to the development or improvement of the source code: Min Chen, Vala Hj�rleifsd�ttir,
+to the development or improvement of the source code: Min Chen, Vala Hj\"orleifsd\'ottir,
 Nicolas Le Goff, Jes\'us Labarta, Brian Savage, Bernhard Schuberth, Anne Sieminski,
 Leif Strand and Peter van Keken. The following individuals (listed
 in alphabetical order) contributed to this manual: Min Chen, Vala
-Hj�rleifsd�ttir, Sue Kientz, Dimitri Komatitsch, Qinya Liu, Alessia
-Maggi, David Mich�a, Brian Savage, Anne Sieminski, Carl Tape, and
+Hj\"orleifsd\'ottir, Sue Kientz, Dimitri Komatitsch, Qinya Liu, Alessia
+Maggi, David Mich\'ea, Brian Savage, Anne Sieminski, Carl Tape, and
 Jeroen Tromp. The manual's cover graphic was created by Santiago Lombeyda
 from Caltech's Center for Advanced Computing Research (CACR) \url{http://www.cacr.caltech.edu/}.
 Older versions of the code were initially developed by Dimitri Komatitsch at Institut de Physique du Globe (France)
@@ -2777,7 +2780,7 @@
 Seismological Laboratory, California Institute of Technology, USA,
 and University of Pau / CNRS / INRIA, France
 
-� California Institute of Technology and University of Pau / CNRS
+$\copyright$ California Institute of Technology and University of Pau / CNRS
 / INRIA, February 2010
 
 This program is free software; you can redistribute it and/or modify
@@ -3250,7 +3253,7 @@
 
 \begin{quote}
 One line to give the program's name and a brief idea of what it does.
-Copyright {\footnotesize � (}year) (name of author)
+Copyright {\footnotesize $\copyright$ (}year) (name of author)
 
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published
@@ -3273,7 +3276,7 @@
 this when it starts in an interactive mode:
 
 \begin{quote}
-Gnomovision version 69, Copyright � year name of author Gnomovision
+Gnomovision version 69, Copyright $\copyright$ year name of author Gnomovision
 comes with ABSOLUTELY NO WARRANTY; for details type `show w'. This
 is free software, and you are welcome to redistribute it under certain
 conditions; type `show c' for details.

Modified: seismo/3D/SPECFEM3D_SESAME/trunk/USER_MANUAL/bibliography.bib
===================================================================
--- seismo/3D/SPECFEM3D_SESAME/trunk/USER_MANUAL/bibliography.bib	2010-02-21 19:10:13 UTC (rev 16298)
+++ seismo/3D/SPECFEM3D_SESAME/trunk/USER_MANUAL/bibliography.bib	2010-02-21 19:26:58 UTC (rev 16299)
@@ -7754,14 +7754,6 @@
   doi = {10.1111/j.1365-246X.2008.03798.x}
 }
 
- at MISC{Liu06b,
-  author = {Q. Liu and J. Tromp},
-  title = {Finite-frequency sensitivity kernels for global seismic wave propagation
-	based upon adjoint methods},
-  year = {2007},
-  note = {in preparation}
-}
-
 @ARTICLE{LiTr06,
   author = {Qinya Liu and Jeroen Tromp},
   title = {Finite-Frequency Kernels Based on Adjoint Methods},



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