[cig-commits] commit: Added fixed, deformed bottom boundary cookbook
Mercurial
hg at geodynamics.org
Thu Jul 15 12:08:06 PDT 2010
changeset: 295:1cd8c6798765
tag: tip
user: Walter Landry <wlandry at caltech.edu>
date: Tue Jul 13 23:38:09 2010 -0700
files: doc/gale.lyx doc/images/Paraview_deformed_bottom.png doc/images/deformed_bottom.eps doc/images/deformed_bottom.svg input/cookbook/viscous_deformed_bottom.xml
description:
Added fixed, deformed bottom boundary cookbook
diff -r c86df357143d -r 1cd8c6798765 doc/gale.lyx
--- a/doc/gale.lyx Tue Jul 13 19:38:17 2010 -0700
+++ b/doc/gale.lyx Tue Jul 13 23:38:09 2010 -0700
@@ -3483,7 +3483,7 @@ input/cookbook/template.xml
There are two things in the template file, however, that might need modificatio
n: the force of gravity, which by default is set to 1 (if you are using
cgs, for example, the force of gravity must be changed to 980), and the
- normal velocities on all boundaries except the top, which are set to zero.
+ normal velocity on all boundaries except the top, which are set to zero.
Beyond that, you only need to specify where to place materials.
\end_layout
@@ -3961,7 +3961,7 @@ name "fig:Strain-viscous-extension"
\end_inset
-Strain rate invariant and velocities of viscous material in extension
+Strain rate invariant and velocity of viscous material in extension
\end_layout
\end_inset
@@ -4260,7 +4260,7 @@ name "fig:Strain-complex"
\end_inset
-Strain rate invariant and velocities with complex boundaries
+Strain rate invariant and velocity with complex boundaries
\end_layout
\end_inset
@@ -4294,8 +4294,8 @@ reference "fig:Inflow/Outflow-Boundary"
.
The current example is not intended to be geologically realistic in any
- sense, but is meant to illustrate the enormous flexibility we have in the
- development of complex boundary conditions.
+ sense, but is meant to illustrate the flexibility we have in the development
+ of complex boundary conditions.
\end_layout
\begin_layout Standard
@@ -4380,7 +4380,7 @@ wrapTop
\end_deeper
\begin_layout Enumerate
-Now specify the velocities on the boundaries using the
+Now specify the velocity on the boundaries using the
\family typewriter
StepFunctionProduct
\family default
@@ -4663,7 +4663,7 @@ name "fig:Strain-inflow"
\end_inset
-Strain rate invariant and velocities with inflow/outflow boundaries
+Strain rate invariant and velocity with inflow/outflow boundaries
\end_layout
\end_inset
@@ -5068,7 +5068,7 @@ name "fig:Strain-viscous-normal-stress"
\end_inset
-Strain rate invariant and velocities of viscous material in extension with
+Strain rate invariant and velocity of viscous material in extension with
a normal stress boundary
\end_layout
@@ -5149,7 +5149,7 @@ name "fig:Strain-deformable-bottom"
\end_inset
-Strain rate invariant and velocities of viscous material with a deformable
+Strain rate invariant and velocity of viscous material with a deformable
bottom boundary
\end_layout
@@ -5271,11 +5271,11 @@ SurfaceAdaptor
\end_layout
\begin_layout LyX-Code
- <param name="surfaceType">sine</param>
-\end_layout
-
-\begin_layout LyX-Code
- <list name="origin">
+ <param name="topSurfaceType">sine</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <list name="topOrigin">
\end_layout
\begin_layout LyX-Code
@@ -5287,11 +5287,11 @@ SurfaceAdaptor
\end_layout
\begin_layout LyX-Code
- <param name="amplitude">0.1</param>
-\end_layout
-
-\begin_layout LyX-Code
- <param name="frequency">6.28318530718</param>
+ <param name="topAmplitude">0.1</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="topFrequency">6.28318530718</param>
\end_layout
\begin_layout LyX-Code
@@ -5354,11 +5354,519 @@ name "fig:Strain-initial-deformed"
\end_inset
-Strain rate invariant and velocities with initially deformed upper boundary
-\end_layout
-
-\end_inset
-
+Strain rate invariant and velocity with initially deformed upper boundary
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Section
+Viscous Material with Fixed, Deformed Bottom Boundary
+\end_layout
+
+\begin_layout Standard
+This example deforms the bottom boundary and keeps it fixed.
+ We will set the left half of the boundary to follow a circle, while the
+ right half will still be flat.
+ Then, the boundary condition for the velocity is set to move the material
+ in from the left and out through the bottom as in Figure .
+ This is meant to approximate one slab subducting under another.
+\end_layout
+
+\begin_layout Standard
+\begin_inset Float figure
+wide false
+sideways false
+status open
+
+\begin_layout Plain Layout
+\align center
+\begin_inset Graphics
+ filename images/deformed_bottom.eps
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Plain Layout
+\begin_inset Caption
+
+\begin_layout Plain Layout
+\begin_inset CommandInset label
+LatexCommand label
+name "fig:Geometry-deformed-bottom"
+
+\end_inset
+
+Geometry and boundary conditions for the fixed, deformed bottom boundary
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Plain Layout
+
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Enumerate
+Copy
+\family typewriter
+myviscous_inflow.xml
+\family default
+ to
+\family typewriter
+myviscous_deformed_bottom.xml
+\end_layout
+
+\begin_layout Enumerate
+Add a
+\family typewriter
+SurfaceAdaptor
+\family default
+ component for the bottom boundary:
+\end_layout
+
+\begin_deeper
+\begin_layout LyX-Code
+<struct name="surfaceAdaptor">
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="Type">SurfaceAdaptor</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="mesh">mesh-linear</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="sourceGenerator">linearMesh-generator</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="bottomSurfaceType">cylinder</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="bottomX0">SolidBodyRotationCentreX</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="bottomY0">SolidBodyRotationCentreY</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="bottomRadius">InnerRadiusCylinder</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="bottomMinX">CylinderMinX</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="bottomMaxX">CylinderMaxX</param>
+\end_layout
+
+\begin_layout LyX-Code
+</struct>
+\end_layout
+
+\end_deeper
+\begin_layout Enumerate
+Replace the left boundary condition for the velocity
+\end_layout
+
+\begin_deeper
+\begin_layout LyX-Code
+<struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">WallVC</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="wall">left</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <list name="variables">
+\end_layout
+
+\begin_layout LyX-Code
+ <struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="name">vx</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">func</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="value">StepFunctionProduct3</param>
+\end_layout
+
+\begin_layout LyX-Code
+ </struct>
+\end_layout
+
+\begin_layout LyX-Code
+ </list>
+\end_layout
+
+\begin_layout LyX-Code
+</struct>
+\end_layout
+
+\begin_layout Standard
+with
+\end_layout
+
+\begin_layout LyX-Code
+<struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">WallVC</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="wall">left</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <list name="variables">
+\end_layout
+
+\begin_layout LyX-Code
+ <struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="name">vx</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">func</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="value">Velocity_PartialRotationX</param>
+\end_layout
+
+\begin_layout LyX-Code
+ </struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="name">vy</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">func</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="value">Velocity_PartialRotationY</param>
+\end_layout
+
+\begin_layout LyX-Code
+ </struct>
+\end_layout
+
+\begin_layout LyX-Code
+ </list>
+\end_layout
+
+\begin_layout LyX-Code
+</struct>
+\end_layout
+
+\end_deeper
+\begin_layout Enumerate
+Replace the bottom boundary condition
+\end_layout
+
+\begin_deeper
+\begin_layout LyX-Code
+<struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">WallVC</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="wall">bottom</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <list name="variables">
+\end_layout
+
+\begin_layout LyX-Code
+ <struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="name">vy</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">func</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="value">StepFunctionProduct2</param>
+\end_layout
+
+\begin_layout LyX-Code
+ </struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="name">vx</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">func</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="value">StepFunctionProduct1</param>
+\end_layout
+
+\begin_layout LyX-Code
+ </struct>
+\end_layout
+
+\begin_layout LyX-Code
+ </list>
+\end_layout
+
+\begin_layout LyX-Code
+</struct>
+\end_layout
+
+\begin_layout Standard
+with
+\end_layout
+
+\begin_layout LyX-Code
+<struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">WallVC</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="wall">bottom</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <list name="variables">
+\end_layout
+
+\begin_layout LyX-Code
+ <struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="name">vx</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">func</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="value">Velocity_PartialRotationX</param>
+\end_layout
+
+\begin_layout LyX-Code
+ </struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <struct>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="name">vy</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="type">func</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="value">Velocity_PartialRotationY</param>
+\end_layout
+
+\begin_layout LyX-Code
+ </struct>
+\end_layout
+
+\begin_layout LyX-Code
+ </list>
+\end_layout
+
+\begin_layout LyX-Code
+</struct>
+\end_layout
+
+\end_deeper
+\begin_layout Enumerate
+Finally, replace the
+\family typewriter
+StepFunction
+\family default
+ variables
+\end_layout
+
+\begin_deeper
+\begin_layout LyX-Code
+ <param name="StepFunctionProduct3Start">0.1</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="StepFunctionProduct3End">0.2</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="StepFunctionProduct3Value">1</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="StepFunctionProduct1Start">0.9</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="StepFunctionProduct1End">1.1</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="StepFunctionProduct1Value">1.0</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="StepFunctionProduct2Start">0.9</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="StepFunctionProduct2End">1.1</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="StepFunctionProduct2Value">-1.0</param>
+\end_layout
+
+\begin_layout Standard
+with rotation variables
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="SolidBodyRotationOmega">-1</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="SolidBodyRotationCentreX">0</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="SolidBodyRotationCentreY">-3</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="InnerRadiusCylinder">3.15</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="CylinderMinX">0</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="CylinderMaxX">0.960468635615</param>
+\end_layout
+
+\begin_layout LyX-Code
+ <param name="RadiusCylinder">3.35</param>
+\end_layout
+
+\end_deeper
+\begin_layout Standard
+A worked example is in input/cookbook/viscous_deformed_bottom.xml.
+ Figure shows the strain rate invariant and velocity.
+\end_layout
+
+\begin_layout Standard
+\begin_inset Float figure
+wide false
+sideways false
+status open
+
+\begin_layout Plain Layout
+
+\end_layout
+
+\begin_layout Plain Layout
+\align center
+\begin_inset Graphics
+ filename images/Paraview_deformed_bottom.png
+ lyxscale 75
+ width 100col%
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Plain Layout
+\begin_inset Caption
+
+\begin_layout Plain Layout
+\begin_inset CommandInset label
+LatexCommand label
+name "fig:Strain-deformed-bottom"
+
+\end_inset
+
+Strain rate invariant and velocity for a deformed bottom boundary
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Plain Layout
\end_layout
@@ -5892,7 +6400,7 @@ name "fig:Strain-multiple"
\end_inset
-Strain rate invariant and velocities with multiple viscous materials
+Strain rate invariant and velocity with multiple viscous materials
\end_layout
\end_inset
@@ -6227,7 +6735,7 @@ name "fig:strain-yield"
\end_inset
-Strain rate invariant and velocities of yielding material in extension
+Strain rate invariant and velocity of yielding material in extension
\end_layout
\end_inset
@@ -6993,7 +7501,7 @@ name "fig:Temperature-and-velocity"
\end_inset
-Temperature and velocities for the thermal convection example
+Temperature and velocity for the thermal convection example
\end_layout
\end_inset
@@ -8535,16 +9043,6 @@ Note the critical line
\begin_layout Standard
that makes the top surface conform to the simulation.
- Other options (
-\family typewriter
-wrapBottom
-\family default
-,
-\family typewriter
-wrapLeft
-\family default
-) are available, but untested.
-
\end_layout
\begin_layout Standard
diff -r c86df357143d -r 1cd8c6798765 doc/images/Paraview_deformed_bottom.png
Binary file doc/images/Paraview_deformed_bottom.png has changed
diff -r c86df357143d -r 1cd8c6798765 doc/images/deformed_bottom.eps
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/doc/images/deformed_bottom.eps Tue Jul 13 23:38:09 2010 -0700
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diff -r c86df357143d -r 1cd8c6798765 input/cookbook/viscous_deformed_bottom.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/input/cookbook/viscous_deformed_bottom.xml Tue Jul 13 23:38:09 2010 -0700
@@ -0,0 +1,544 @@
+<?xml version="1.0"?>
+<StGermainData xmlns="http://www.vpac.org/StGermain/XML_IO_Handler/Jun2003">
+ <import>
+ <toolbox>Underworld</toolbox>
+ </import>
+ <plugins>
+ <struct>
+ <param name="Type">Underworld_EulerDeform</param>
+ <param name="Context">context</param>
+ </struct>
+ <struct>
+ <param name="Type">Underworld_VTKOutput</param>
+ <param name="Context">context</param>
+ </struct>
+ <struct>
+ <param name="Type">StgFEM_StandardConditionFunctions</param>
+ <param name="Context">context</param>
+ </struct>
+ </plugins>
+ <struct name="components">
+ <struct name="context">
+ <param name="Type">UnderworldContext</param>
+ </struct>
+ <struct name="mesh-linear">
+ <param name="Type">FeMesh</param>
+ <param name="elementType">linear</param>
+ </struct>
+ <struct name="linearMesh-generator">
+ <param name="Type">CartesianGenerator</param>
+ <param name="mesh">mesh-linear</param>
+ <param name="dim">dim</param>
+ <param name="shadowDepth">shadowDepth</param>
+ <param name="regular">False</param>
+ <list name="size">
+ <param>elementResI</param>
+ <param>elementResJ</param>
+ <param>elementResK</param>
+ </list>
+ <list name="minCoord">
+ <param>minX</param>
+ <param>minY</param>
+ <param>minZ</param>
+ </list>
+ <list name="maxCoord">
+ <param>maxX</param>
+ <param>maxY</param>
+ <param>maxZ</param>
+ </list>
+ </struct>
+ <struct name="velocity">
+ <param name="Type">MeshVariable</param>
+ <param name="mesh">mesh-linear</param>
+ <param name="Rank">Vector</param>
+ <param name="DataType">Double</param>
+ <param name="VectorComponentCount">dim</param>
+ <list name="names">
+ <param>vx</param>
+ <param>vy</param>
+ <param>vz</param>
+ </list>
+ </struct>
+ <struct name="velocityBCs">
+ <param name="Type">CompositeVC</param>
+ <param name="Data">mesh-linear</param>
+ </struct>
+ <struct name="velocityICs">
+ <param name="Type">CompositeVC</param>
+ <param name="Data">mesh-linear</param>
+ </struct>
+ <struct name="velocityDofLayout">
+ <param name="Type">DofLayout</param>
+ <param name="mesh">mesh-linear</param>
+ <param name="BaseVariableCount">dim</param>
+ <list name="BaseVariables">
+ <param>vx</param>
+ <param>vy</param>
+ <param>vz</param>
+ </list>
+ </struct>
+ <struct name="VelocityField">
+ <param name="Type">FeVariable</param>
+ <param name="FEMesh">mesh-linear</param>
+ <param name="DofLayout">velocityDofLayout</param>
+ <param name="BC">velocityBCs</param>
+ <param name="IC">velocityICs</param>
+ <param name="LinkedDofInfo">velocityLinkedDofs</param>
+ </struct>
+ <struct name="VelocityMagnitudeField">
+ <param name="Type">OperatorFeVariable</param>
+ <param name="Operator">Magnitude</param>
+ <param name="FeVariable">VelocityField</param>
+ </struct>
+ <struct name="VelocityGradientsField">
+ <param name="Type">OperatorFeVariable</param>
+ <param name="Operator">Gradient</param>
+ <param name="FeVariable">VelocityField</param>
+ </struct>
+ <struct name="VelocityGradientsInvariantField">
+ <param name="Type">OperatorFeVariable</param>
+ <param name="Operator">TensorInvariant</param>
+ <param name="FeVariable">VelocityGradientsField</param>
+ </struct>
+ <struct name="StrainRateField">
+ <param name="Type">OperatorFeVariable</param>
+ <param name="Operator">TensorSymmetricPart</param>
+ <param name="FeVariable">VelocityGradientsField</param>
+ </struct>
+ <struct name="VorticityField">
+ <param name="Type">OperatorFeVariable</param>
+ <param name="Operator">TensorAntisymmetricPart</param>
+ <param name="FeVariable">VelocityGradientsField</param>
+ </struct>
+ <struct name="StrainRateInvariantField">
+ <param name="Type">OperatorFeVariable</param>
+ <param name="Operator">SymmetricTensor_Invariant</param>
+ <param name="FeVariable">StrainRateField</param>
+ </struct>
+ <struct name="pressure">
+ <param name="Type">MeshVariable</param>
+ <param name="mesh">mesh-linear</param>
+ <param name="Rank">Scalar</param>
+ <param name="DataType">Double</param>
+ </struct>
+ <struct name="pressureDofLayout">
+ <param name="Type">DofLayout</param>
+ <param name="mesh">mesh-linear</param>
+ <list name="BaseVariables">
+ <param>pressure</param>
+ </list>
+ </struct>
+ <struct name="PressureField">
+ <param name="Type">FeVariable</param>
+ <param name="FEMesh">mesh-linear</param>
+ <param name="DofLayout">pressureDofLayout</param>
+ <param name="LinkedDofInfo">pressureLinkedDofs</param>
+ </struct>
+ <struct name="StressField">
+ <param name="Type">StressField</param>
+ <param name="StrainRateField">StrainRateField</param>
+ <param name="Context">context</param>
+ <param name="ConstitutiveMatrix">constitutiveMatrix</param>
+ <param name="Swarm">picIntegrationPoints</param>
+ <param name="Mesh">mesh-linear</param>
+ <param name="IC">stressICs</param>
+ </struct>
+ <struct name="ViscosityField">
+ <param name="Type">ViscosityField</param>
+ <param name="Context">context</param>
+ <param name="Swarm">picIntegrationPoints</param>
+ <param name="Mesh">mesh-linear</param>
+ <param name="ConstitutiveMatrix">constitutiveMatrix</param>
+ </struct>
+ <struct name="cellLayout">
+ <param name="Type">SingleCellLayout</param>
+ </struct>
+ <struct name="particleLayout">
+ <param name="Type">GaussParticleLayout</param>
+ </struct>
+ <struct name="gaussSwarm">
+ <param name="Type">IntegrationPointsSwarm</param>
+ <param name="CellLayout">cellLayout</param>
+ <param name="ParticleLayout">particleLayout</param>
+ <param name="FeMesh">mesh-linear</param>
+ <param name="TimeIntegrator">timeIntegrator</param>
+ <param name="IntegrationPointMapper">gaussMapper</param>
+ </struct>
+ <struct name="gaussMapper">
+ <param name="Type">GaussMapper</param>
+ <param name="IntegrationPointsSwarm">gaussSwarm</param>
+ <param name="MaterialPointsSwarm">gaussMaterialSwarm</param>
+ </struct>
+ <struct name="backgroundLayout">
+ <param name="Type">BackgroundParticleLayout</param>
+ </struct>
+ <struct name="gaussMSwarmMovementHandler">
+ <param name="Type">ParticleMovementHandler</param>
+ </struct>
+ <struct name="gaussMaterialSwarm">
+ <param name="Type">MaterialPointsSwarm</param>
+ <param name="CellLayout">cellLayout</param>
+ <param name="ParticleLayout">backgroundLayout</param>
+ <param name="FeMesh">mesh-linear</param>
+ <list name="ParticleCommHandlers">
+ <param>gaussMSwarmMovementHandler</param>
+ </list>
+ </struct>
+ <struct name="timeIntegrator">
+ <param name="Type">TimeIntegrator</param>
+ <param name="order">timeIntegratorOrder</param>
+ <param name="simultaneous">f</param>
+ <param name="Context">context</param>
+ </struct>
+ <struct name="elementCellLayout">
+ <param name="Type">ElementCellLayout</param>
+ <param name="Mesh">mesh-linear</param>
+ </struct>
+ <struct name="weights">
+ <param name="Type">PCDVC</param>
+ <param name="resolutionX">10</param>
+ <param name="resolutionY">10</param>
+ <param name="resolutionZ">10</param>
+ <param name="lowerT">0.6</param>
+ <param name="upperT">25</param>
+ <param name="maxDeletions">3</param>
+ <param name="maxSplits">3</param>
+ <param name="MaterialPointsSwarm">materialSwarm</param>
+ <param name="Inflow">True</param>
+ <param name="Threshold">0.8</param>
+ <param name="CentPosRatio">0.01</param>
+ </struct>
+ <struct name="localLayout">
+ <param name="Type">MappedParticleLayout</param>
+ </struct>
+ <struct name="picIntegrationPoints">
+ <param name="Type">IntegrationPointsSwarm</param>
+ <param name="CellLayout">elementCellLayout</param>
+ <param name="ParticleLayout">localLayout</param>
+ <param name="FeMesh">mesh-linear</param>
+ <param name="WeightsCalculator">weights</param>
+ <param name="TimeIntegrator">timeIntegrator</param>
+ <param name="IntegrationPointMapper">mapper</param>
+ </struct>
+ <struct name="mapper">
+ <param name="Type">CoincidentMapper</param>
+ <param name="IntegrationPointsSwarm">picIntegrationPoints</param>
+ <param name="MaterialPointsSwarm">materialSwarm</param>
+ </struct>
+ <struct name="materialSwarmParticleLayout">
+ <param name="Type">MeshParticleLayout</param>
+ <param name="cellParticleCount">particlesPerCell</param>
+ <param name="mesh">mesh-linear</param>
+ </struct>
+ <struct name="pMovementHandler">
+ <param name="Type">ParticleMovementHandler</param>
+ </struct>
+ <struct name="pShadowSync">
+ <param name="Type">ParticleShadowSync</param>
+ </struct>
+ <struct name="materialSwarm">
+ <param name="Type">MaterialPointsSwarm</param>
+ <param name="CellLayout">elementCellLayout</param>
+ <param name="ParticleLayout">materialSwarmParticleLayout</param>
+ <param name="FeMesh">mesh-linear</param>
+ <list name="ParticleCommHandlers">
+ <param>pMovementHandler</param>
+ <param>pShadowSync</param>
+ </list>
+ <param name="SplittingRoutine">splittingRoutine</param>
+ <param name="RemovalRoutine">removalRoutine</param>
+ <param name="EscapedRoutine">escapedRoutine</param>
+ </struct>
+ <struct name="materialSwarmAdvector">
+ <param name="Type">SwarmAdvector</param>
+ <param name="Swarm">materialSwarm</param>
+ <param name="TimeIntegrator">timeIntegrator</param>
+ <param name="VelocityField">VelocityField</param>
+ <param name="PeriodicBCsManager">periodicBCsManager</param>
+ <param name="allowFallbackToFirstOrder">True</param>
+ </struct>
+ <struct name="solutionVelocity">
+ <param name="Type">SolutionVector</param>
+ <param name="FeVariable">VelocityField</param>
+ </struct>
+ <struct name="solutionPressure">
+ <param name="Type">SolutionVector</param>
+ <param name="FeVariable">PressureField</param>
+ </struct>
+ <struct name="mom_force">
+ <param name="Type">ForceVector</param>
+ <param name="FeVariable">VelocityField</param>
+ <param name="ExtraInfo">context</param>
+ </struct>
+ <struct name="cont_force">
+ <param name="Type">ForceVector</param>
+ <param name="FeVariable">PressureField</param>
+ <param name="ExtraInfo">context</param>
+ </struct>
+ <struct name="k_matrix">
+ <param name="Type">StiffnessMatrix</param>
+ <param name="RowVariable">VelocityField</param>
+ <param name="ColumnVariable">VelocityField</param>
+ <param name="RHS">mom_force</param>
+ <param name="allowZeroElementContributions">False</param>
+ </struct>
+ <struct name="constitutiveMatrix">
+ <param name="Type">ConstitutiveMatrixCartesian</param>
+ <param name="Swarm">picIntegrationPoints</param>
+ <param name="StiffnessMatrix">k_matrix</param>
+ </struct>
+ <struct name="g_matrix">
+ <param name="Type">StiffnessMatrix</param>
+ <param name="RowVariable">VelocityField</param>
+ <param name="ColumnVariable">PressureField</param>
+ <param name="RHS">mom_force</param>
+ <param name="transposeRHS">cont_force</param>
+ <param name="allowZeroElementContributions">False</param>
+ </struct>
+ <struct name="gradientStiffnessMatrixTerm">
+ <param name="Type">GradientStiffnessMatrixTerm</param>
+ <param name="Swarm">gaussSwarm</param>
+ <param name="StiffnessMatrix">g_matrix</param>
+ </struct>
+ <struct name="preconditioner">
+ <param name="Type">StiffnessMatrix</param>
+ <param name="RowVariable">PressureField</param>
+ <param name="ColumnVariable">PressureField</param>
+ <param name="RHS">cont_force</param>
+ <param name="allowZeroElementContributions">True</param>
+ </struct>
+ <struct name="preconditionerTerm">
+ <param name="Type">UzawaPreconditionerTerm</param>
+ <param name="Swarm">picIntegrationPoints</param>
+ <param name="StiffnessMatrix">preconditioner</param>
+ </struct>
+ <struct name="uzawa">
+ <param name="Type">Stokes_SLE_UzawaSolver</param>
+ <param name="velocitySolver">matrixSolver</param>
+ <param name="Preconditioner">preconditioner</param>
+ <param name="tolerance">linearTolerance</param>
+ <param name="monitor">false</param>
+ <param name="maxIterations">5000</param>
+ <param name="minIterations">1</param>
+ </struct>
+ <struct name="stokesEqn">
+ <param name="Type">Stokes_SLE</param>
+ <param name="SLE_Solver">uzawa</param>
+ <param name="Context">context</param>
+ <param name="StressTensorMatrix">k_matrix</param>
+ <param name="GradientMatrix">g_matrix</param>
+ <param name="DivergenceMatrix"></param>
+ <param name="CompressibilityMatrix">c_matrix</param>
+ <param name="VelocityVector">solutionVelocity</param>
+ <param name="PressureVector">solutionPressure</param>
+ <param name="ForceVector">mom_force</param>
+ <param name="ContinuityForceVector">cont_force</param>
+ <param name="nonLinearMaxIterations">nonLinearMaxIterations</param>
+ <param name="nonLinearTolerance">nonLinearTolerance</param>
+ <param name="makeConvergenceFile">false</param>
+ </struct>
+ <struct name="c_matrix">
+ <param name="Type">StiffnessMatrix</param>
+ <param name="RowVariable">PressureField</param>
+ <param name="ColumnVariable">PressureField</param>
+ <param name="RHS">cont_force</param>
+ <param name="allowZeroElementContributions">True</param>
+ </struct>
+ <struct name="mixedStabiliser">
+ <param name="Type">MixedStabiliserTerm</param>
+ <param name="Swarm">gaussSwarm</param>
+ <param name="picSwarm">picIntegrationPoints</param>
+ <param name="storeVisc">storeViscosity</param>
+ <param name="StiffnessMatrix">c_matrix</param>
+ </struct>
+ <struct name="buoyancyForceTerm">
+ <param name="Type">BuoyancyForceTerm</param>
+ <param name="ForceVector">mom_force</param>
+ <param name="Swarm">picIntegrationPoints</param>
+ <param name="gravity">gravity</param>
+ </struct>
+ <struct name="background">
+ <param name="Type">Everywhere</param>
+ </struct>
+ <struct name="escapedRoutine">
+ <param name="Type">EscapedRoutine</param>
+ <param name="idealParticleCount">0</param>
+ </struct>
+ <struct name="velocityRemesher">
+ <param name="Type">RegularRemesherCmpt</param>
+ <param name="mesh">mesh-linear</param>
+ <list name="remeshDims">
+ <param>0</param>
+ <param>1</param>
+ <param>2</param>
+ </list>
+ </struct>
+
+ <struct name="boxShape">
+ <param name="Type">Box</param>
+ <param name="startX">minX</param>
+ <param name="endX">maxX</param>
+ <param name="startY">minY</param>
+ <param name="endY">maxY</param>
+ <param name="startZ">minZ</param>
+ <param name="endZ">maxZ</param>
+ </struct>
+ <struct name="leftBoundaryShape">
+ <param name="Type">Box</param>
+ <param name="startX">minX</param>
+ <param name="endX">0.1</param>
+ <param name="startY">minY</param>
+ <param name="endY">maxY</param>
+ <param name="startZ">minZ</param>
+ <param name="endZ">maxZ</param>
+ </struct>
+
+ <struct name="backgroundViscosity">
+ <param name="Type">MaterialViscosity</param>
+ <param name="eta0">1.0</param>
+ </struct>
+ <struct name="storeViscosity">
+ <param name="Type">StoreVisc</param>
+ <param name="MaterialPointsSwarm">materialSwarm</param>
+ </struct>
+ <struct name="storeStress">
+ <param name="Type">StoreStress</param>
+ <param name="MaterialPointsSwarm">materialSwarm</param>
+ </struct>
+ <struct name="viscous">
+ <param name="Type">RheologyMaterial</param>
+ <param name="Shape">boxShape</param>
+ <param name="density">1.0</param>
+ <list name="Rheology">
+ <param>backgroundViscosity</param>
+ <param>storeViscosity</param>
+ <param>storeStress</param>
+ </list>
+ </struct>
+
+ <struct name="surfaceAdaptor">
+ <param name="Type">SurfaceAdaptor</param>
+ <param name="mesh">mesh-linear</param>
+ <param name="sourceGenerator">linearMesh-generator</param>
+ <param name="bottomSurfaceType">cylinder</param>
+ <param name="bottomX0">SolidBodyRotationCentreX</param>
+ <param name="bottomY0">SolidBodyRotationCentreY</param>
+ <param name="bottomRadius">InnerRadiusCylinder</param>
+ <param name="bottomMinX">CylinderMinX</param>
+ <param name="bottomMaxX">CylinderMaxX</param>
+ </struct>
+
+ </struct>
+
+ <list name="FieldVariablesToCheckpoint">
+ <param>VelocityField</param>
+ <param>PressureField</param>
+ </list>
+ <param name="timeIntegratorOrder">1</param>
+ <param name="maxTimeSteps">10</param>
+ <param name="outputEvery">1</param>
+ <param name="dumpEvery">1</param>
+ <param name="outputPath">./output</param>
+ <param name="dim">2</param>
+ <param name="shadowDepth">1</param>
+ <param name="minX">0.0f</param>
+ <param name="minY">0.0f</param>
+ <param name="minZ">0.0f</param>
+ <param name="maxX">2.0f</param>
+ <param name="maxY">0.35f</param>
+ <param name="maxZ">0.3f</param>
+ <param name="elementResI">32</param>
+ <param name="elementResJ">16</param>
+ <param name="elementResK">4</param>
+ <param name="allowUnbalancing">True</param>
+ <param name="buildNodeNeighbourTbl">True</param>
+ <param name="buildElementNeighbourTbl">True</param>
+ <param name="particlesPerCell">30</param>
+ <param name="seed">13</param>
+ <param name="gaussParticlesX">2</param>
+ <param name="gaussParticlesY">2</param>
+ <param name="gaussParticlesZ">2</param>
+ <param name="particlesPerCell">30</param>
+ <struct name="EulerDeform">
+ <list name="systems">
+ <struct>
+ <param name="mesh">mesh-linear</param>
+ <param name="remesher">velocityRemesher</param>
+ <param name="velocityField">VelocityField</param>
+ <param name="wrapTop">True</param>
+ <param name="staticLeft">True</param>
+ <param name="staticLeftTop">True</param>
+ <param name="staticBottom">True</param>
+ <list name="fields">
+ <struct>
+ <param name="field">VelocityField</param>
+ <param name="variable">velocity</param>
+ </struct>
+ <struct>
+ <param name="field">PressureField</param>
+ <param name="variable">pressure</param>
+ </struct>
+ </list>
+ </struct>
+ </list>
+ </struct>
+ <struct name="velocityBCs">
+ <param name="type">CompositeVC</param>
+ <list name="vcList">
+ <struct>
+ <param name="type">WallVC</param>
+ <param name="wall">left</param>
+ <list name="variables">
+ <struct>
+ <param name="name">vx</param>
+ <param name="type">func</param>
+ <param name="value">Velocity_PartialRotationX</param>
+ </struct>
+ <struct>
+ <param name="name">vy</param>
+ <param name="type">func</param>
+ <param name="value">Velocity_PartialRotationY</param>
+ </struct>
+ </list>
+ </struct>
+ <struct>
+ <param name="type">WallVC</param>
+ <param name="wall">right</param>
+ <list name="variables">
+ <struct>
+ <param name="name">vx</param>
+ <param name="type">double</param>
+ <param name="value">0.0</param>
+ </struct>
+ </list>
+ </struct>
+ <struct>
+ <param name="type">WallVC</param>
+ <param name="wall">bottom</param>
+ <list name="variables">
+ <struct>
+ <param name="name">vx</param>
+ <param name="type">func</param>
+ <param name="value">Velocity_PartialRotationX</param>
+ </struct>
+ <struct>
+ <param name="name">vy</param>
+ <param name="type">func</param>
+ <param name="value">Velocity_PartialRotationY</param>
+ </struct>
+ </list>
+ </struct>
+ </list>
+ </struct>
+ <param name="checkpointEvery">1</param>
+ <param name="gravity">1.0</param>
+
+ <param name="SolidBodyRotationOmega">-1</param>
+ <param name="SolidBodyRotationCentreX">0</param>
+ <param name="SolidBodyRotationCentreY">-3</param>
+ <param name="InnerRadiusCylinder">3.15</param>
+ <param name="CylinderMinX">0</param>
+ <param name="CylinderMaxX">0.960468635615</param>
+ <param name="RadiusCylinder">3.35</param>
+
+</StGermainData>
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