[cig-commits] r16922 - short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh
brad at geodynamics.org
brad at geodynamics.org
Mon Jun 7 20:56:52 PDT 2010
Author: brad
Date: 2010-06-07 20:56:52 -0700 (Mon, 07 Jun 2010)
New Revision: 16922
Added:
short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/slice_hex8.cfg
short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/volume_hex8.cfg
Removed:
short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/slice_dislocation.cfg
short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/volume_dislocation.cfg
Log:
Updated settings.
Deleted: short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/slice_dislocation.cfg
===================================================================
--- short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/slice_dislocation.cfg 2010-06-08 02:33:44 UTC (rev 16921)
+++ short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/slice_dislocation.cfg 2010-06-08 03:56:52 UTC (rev 16922)
@@ -1,150 +0,0 @@
-# -*- Python -*-
-[pylithapp]
-
-# ----------------------------------------------------------------------
-# journal
-# ----------------------------------------------------------------------
-[pylithapp.journal.info]
-timedependent = 1
-implicit = 1
-petsc = 1
-solverlinear = 1
-meshiocubit = 1
-implicitelasticity = 1
-#quadrature3d = 1
-#fiatlagrange = 1
-
-# ----------------------------------------------------------------------
-# mesh_generator
-# ----------------------------------------------------------------------
-[pylithapp.mesh_generator]
-#debug = 1
-reader = pylith.meshio.MeshIOCubit
-use_nodeset_names = False
-
-[pylithapp.mesh_generator.reader]
-filename = slice_hex8.exo
-
-coordsys = spatialdata.geocoords.CSGeoProj
-coordsys.projector.projection = tmerc
-coordsys.projector.proj-options = +lon_0=-118.2467 +lat_0=34.0550
-coordsys.datum_vert = mean sea level
-
-# ----------------------------------------------------------------------
-# problem
-# ----------------------------------------------------------------------
-[pylithapp.timedependent]
-dimension = 3
-bc = [bc_east,bc_west,bc_bottom,bc_ground]
-interfaces = [fault]
-
-[pylithapp.timedependent.formulation.time_step]
-total_time = 0.0*s
-
-# ----------------------------------------------------------------------
-# materials
-# ----------------------------------------------------------------------
-[pylithapp.timedependent]
-materials = [elastic]
-materials.elastic = pylith.materials.ElasticIsotropic3D
-
-[pylithapp.timedependent.materials.elastic]
-label = Elastic material
-id = 1
-
-db = spatialdata.spatialdb.SCECCVMH
-db.data_dir = /home/brad/data/sceccvm-h/vx53/bin
-db.squash = True
-db.squash_limit = -8.0*km
-#db = spatialdata.spatialdb.SimpleDB
-#db.iohandler.filename = mat_homogeneous.spatialdb
-
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 3
-quadrature.cell.quad_order = 2
-
-# ----------------------------------------------------------------------
-# boundary conditions
-# ----------------------------------------------------------------------
-[pylithapp.timedependent.bc.bc_east]
-bc_dof = [0, 1]
-label = 21
-db_initial = spatialdata.spatialdb.UniformDB
-db_initial.label = Dirichlet BC east surface
-db_initial.values = [displacement-x,displacement-y]
-db_initial.data = [0.0*m,-2.0*m]
-
-[pylithapp.timedependent.bc.bc_west]
-bc_dof = [0, 1]
-label = 22
-db_initial = spatialdata.spatialdb.UniformDB
-db_initial.label = Dirichlet BC west surface
-db_initial.values = [displacement-x,displacement-y]
-db_initial.data = [0.0*m,+2.0*m]
-
-[pylithapp.timedependent.bc.bc_bottom]
-bc_dof = [2]
-label = 26
-db_initial = spatialdata.spatialdb.UniformDB
-db_initial.label = Dirichlet BC bottom surface
-db_initial.values = [displacement-z]
-db_initial.data = [0.0*m]
-
-[pylithapp.timedependent.bc.bc_ground]
-bc_dof = [2]
-label = 25
-db_initial = spatialdata.spatialdb.UniformDB
-db_initial.label = Dirichlet BC ground surface
-db_initial.values = [displacement-z]
-db_initial.data = [0.0*m]
-
-# ----------------------------------------------------------------------
-# faults
-# ----------------------------------------------------------------------
-[pylithapp.timedependent.interfaces]
-fault = pylith.faults.FaultCohesiveKin
-
-[pylithapp.timedependent.interfaces.fault]
-id = 2
-label = 10
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 2
-quadrature.cell.quad_order = 2
-
-[pylithapp.timedependent.interfaces.fault.eq_srcs.rupture.slip_function]
-slip.iohandler.filename = dislocation_slip.spatialdb
-slip_time.iohandler.filename = dislocation_sliptime.spatialdb
-
-
-# ----------------------------------------------------------------------
-# PETSc
-# ----------------------------------------------------------------------
-[pylithapp.petsc]
-ksp_rtol = 1.0e-8
-pc_type = asm
-# Change the preconditioner settings (must turn off
-# shift_positive_definite and turn on shift_nonzero).
-sub_pc_factor_shift_positive_definite = 0
-sub_pc_factor_shift_nonzero =
-
-ksp_max_it = 200
-ksp_gmres_restart = 50
-ksp_monitor = true
-ksp_view = true
-log_summary = true
-# start_in_debugger = true
-
-# ----------------------------------------------------------------------
-# output
-# ----------------------------------------------------------------------
-# Give basename for VTK domain output of solution over domain.
-[pylithapp.problem.formulation.output.output.writer]
-filename = slice-dislocation.vtk
-
-# Give basename for VTK output of state variables.
-[pylithapp.timedependent.materials.elastic.output]
-cell_filter = pylith.meshio.CellFilterAvgMesh
-writer.filename = slice-dislocation-elastic.vtk
-
-[pylithapp.timedependent.interfaces.fault.output.writer]
-filename = slice-dislocation-fault.vtk
Copied: short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/slice_hex8.cfg (from rev 16725, short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/slice_dislocation.cfg)
===================================================================
--- short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/slice_hex8.cfg (rev 0)
+++ short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/slice_hex8.cfg 2010-06-08 03:56:52 UTC (rev 16922)
@@ -0,0 +1,126 @@
+# -*- Python -*-
+[pylithapp]
+
+# ----------------------------------------------------------------------
+# journal
+# ----------------------------------------------------------------------
+[pylithapp.journal.info]
+timedependent = 1
+implicit = 1
+petsc = 1
+solverlinear = 1
+meshiocubit = 1
+implicitelasticity = 1
+#quadrature3d = 1
+#fiatlagrange = 1
+
+# ----------------------------------------------------------------------
+# mesh_generator
+# ----------------------------------------------------------------------
+[pylithapp.mesh_generator]
+#debug = 1
+reader = pylith.meshio.MeshIOCubit
+reader.use_nodeset_names = False
+
+[pylithapp.mesh_generator.reader]
+filename = slice_hex8.exo
+
+coordsys = spatialdata.geocoords.CSGeoProj
+coordsys.projector.projection = tmerc
+coordsys.projector.proj-options = +lon_0=-118.2467 +lat_0=34.0550
+coordsys.datum_vert = mean sea level
+
+# ----------------------------------------------------------------------
+# problem
+# ----------------------------------------------------------------------
+[pylithapp.timedependent]
+dimension = 3
+bc = [bc_east,bc_west,bc_bottom,bc_ground]
+
+[pylithapp.timedependent.formulation.time_step]
+total_time = 0.0*s
+
+# ----------------------------------------------------------------------
+# materials
+# ----------------------------------------------------------------------
+[pylithapp.timedependent]
+materials = [elastic]
+materials.elastic = pylith.materials.ElasticIsotropic3D
+
+[pylithapp.timedependent.materials.elastic]
+label = Elastic material
+id = 1
+
+db_properties = spatialdata.spatialdb.SCECCVMH
+db_properties.data_dir = /home/brad/data/sceccvm-h/vx53/bin
+db_properties.squash = True
+db_properties.squash_limit = -8.0*km
+#db_properties = spatialdata.spatialdb.SimpleDB
+#db_properties.iohandler.filename = mat_homogeneous.spatialdb
+
+quadrature.cell = pylith.feassemble.FIATLagrange
+quadrature.cell.dimension = 3
+quadrature.cell.quad_order = 2
+
+# ----------------------------------------------------------------------
+# boundary conditions
+# ----------------------------------------------------------------------
+[pylithapp.timedependent.bc.bc_east]
+bc_dof = [0, 1]
+label = 21
+db_initial = spatialdata.spatialdb.UniformDB
+db_initial.label = Dirichlet BC east surface
+db_initial.values = [displacement-x,displacement-y]
+db_initial.data = [0.0*m,-2.0*m]
+
+[pylithapp.timedependent.bc.bc_west]
+bc_dof = [0, 1]
+label = 22
+db_initial = spatialdata.spatialdb.UniformDB
+db_initial.label = Dirichlet BC west surface
+db_initial.values = [displacement-x,displacement-y]
+db_initial.data = [0.0*m,+2.0*m]
+
+[pylithapp.timedependent.bc.bc_bottom]
+bc_dof = [2]
+label = 26
+db_initial = spatialdata.spatialdb.UniformDB
+db_initial.label = Dirichlet BC bottom surface
+db_initial.values = [displacement-z]
+db_initial.data = [0.0*m]
+
+[pylithapp.timedependent.bc.bc_ground]
+bc_dof = [2]
+label = 25
+db_initial = spatialdata.spatialdb.UniformDB
+db_initial.label = Dirichlet BC ground surface
+db_initial.values = [displacement-z]
+db_initial.data = [0.0*m]
+
+# ----------------------------------------------------------------------
+# PETSc
+# ----------------------------------------------------------------------
+[pylithapp.petsc]
+ksp_rtol = 1.0e-8
+pc_type = asm
+
+sub_pc_factor_shift_type = nonzero
+
+ksp_max_it = 200
+ksp_gmres_restart = 50
+ksp_monitor = true
+ksp_view = true
+log_summary = true
+# start_in_debugger = true
+
+# ----------------------------------------------------------------------
+# output
+# ----------------------------------------------------------------------
+# Give basename for VTK domain output of solution over domain.
+[pylithapp.problem.formulation.output.output.writer]
+filename = slice-dislocation.vtk
+
+# Give basename for VTK output of state variables.
+[pylithapp.timedependent.materials.elastic.output]
+cell_filter = pylith.meshio.CellFilterAvgMesh
+writer.filename = slice-dislocation-elastic.vtk
Deleted: short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/volume_dislocation.cfg
===================================================================
--- short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/volume_dislocation.cfg 2010-06-08 02:33:44 UTC (rev 16921)
+++ short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/volume_dislocation.cfg 2010-06-08 03:56:52 UTC (rev 16922)
@@ -1,142 +0,0 @@
-# -*- Python -*-
-[pylithapp]
-
-# ----------------------------------------------------------------------
-# journal
-# ----------------------------------------------------------------------
-[pylithapp.journal.info]
-timedependent = 1
-implicit = 1
-petsc = 1
-solverlinear = 1
-meshiocubit = 1
-implicitelasticity = 1
-#quadrature3d = 1
-#fiatlagrange = 1
-
-# ----------------------------------------------------------------------
-# mesh_generator
-# ----------------------------------------------------------------------
-[pylithapp.mesh_generator]
-#debug = 1
-reader = pylith.meshio.MeshIOCubit
-use_nodeset_names = False
-
-[pylithapp.mesh_generator.reader]
-filename = volume_hex8.exo
-
-coordsys = spatialdata.geocoords.CSGeoProj
-coordsys.projector.projection = tmerc
-coordsys.projector.proj-options = +lon_0=-118.2467 +lat_0=34.0550
-coordsys.datum_vert = mean sea level
-
-# ----------------------------------------------------------------------
-# problem
-# ----------------------------------------------------------------------
-[pylithapp.timedependent]
-dimension = 3
-bc = [bc_east,bc_west,bc_bottom]
-interfaces = [fault]
-
-[pylithapp.timedependent.formulation.time_step]
-total_time = 0.0*s
-
-# ----------------------------------------------------------------------
-# materials
-# ----------------------------------------------------------------------
-[pylithapp.timedependent]
-materials = [elastic]
-materials.elastic = pylith.materials.ElasticIsotropic3D
-
-[pylithapp.timedependent.materials.elastic]
-label = Elastic material
-id = 1
-
-db = spatialdata.spatialdb.SCECCVMH
-db.data_dir = /home/brad/data/sceccvm-h/vx53/bin
-db.squash = True
-db.squash_limit = -8.0*km
-#db = spatialdata.spatialdb.SimpleDB
-#db.iohandler.filename = mat_homogeneous.spatialdb
-
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 3
-quadrature.cell.quad_order = 2
-
-# ----------------------------------------------------------------------
-# boundary conditions
-# ----------------------------------------------------------------------
-[pylithapp.timedependent.bc.bc_east]
-bc_dof = [0, 1]
-label = 21
-db_initial = spatialdata.spatialdb.UniformDB
-db_initial.label = Dirichlet BC east surface
-db_initial.values = [displacement-x,displacement-y]
-db_initial.data = [0.0*m,-2.0*m]
-
-[pylithapp.timedependent.bc.bc_west]
-bc_dof = [0, 1]
-label = 22
-db_initial = spatialdata.spatialdb.UniformDB
-db_initial.label = Dirichlet BC west surface
-db_initial.values = [displacement-x,displacement-y]
-db_initial.data = [0.0*m,+2.0*m]
-
-[pylithapp.timedependent.bc.bc_bottom]
-bc_dof = [2]
-label = 26
-db_initial = spatialdata.spatialdb.UniformDB
-db_initial.label = Dirichlet BC bottom surface
-db_initial.values = [displacement-z]
-db_initial.data = [0.0*m]
-
-# ----------------------------------------------------------------------
-# faults
-# ----------------------------------------------------------------------
-[pylithapp.timedependent.interfaces]
-fault = pylith.faults.FaultCohesiveKin
-
-[pylithapp.timedependent.interfaces.fault]
-id = 2
-label = 10
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 2
-quadrature.cell.quad_order = 2
-
-[pylithapp.timedependent.interfaces.fault.eq_srcs.rupture.slip_function]
-slip.iohandler.filename = dislocation_slip.spatialdb
-slip_time.iohandler.filename = dislocation_sliptime.spatialdb
-
-
-# ----------------------------------------------------------------------
-# PETSc
-# ----------------------------------------------------------------------
-[pylithapp.petsc]
-ksp_rtol = 1.0e-8
-pc_type = asm
-# Change the preconditioner settings (must turn off
-# shift_positive_definite and turn on shift_nonzero).
-sub_pc_factor_shift_positive_definite = 0
-sub_pc_factor_shift_nonzero =
-
-ksp_max_it = 200
-ksp_gmres_restart = 50
-ksp_monitor = true
-ksp_view = true
-log_summary = true
-# start_in_debugger = true
-
-# ----------------------------------------------------------------------
-# output
-# ----------------------------------------------------------------------
-# Give basename for VTK domain output of solution over domain.
-[pylithapp.problem.formulation.output.output.writer]
-filename = volume-dislocation.vtk
-
-# Give basename for VTK output of state variables.
-[pylithapp.timedependent.materials.elastic.output]
-cell_filter = pylith.meshio.CellFilterAvgMesh
-writer.filename = volume-dislocation-elastic.vtk
-
-[pylithapp.timedependent.interfaces.fault.output.writer]
-filename = volume-dislocation-fault.vtk
Copied: short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/volume_hex8.cfg (from rev 16725, short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/volume_dislocation.cfg)
===================================================================
--- short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/volume_hex8.cfg (rev 0)
+++ short/3D/PyLith/benchmarks/trunk/static/tests/sceccvmh/volume_hex8.cfg 2010-06-08 03:56:52 UTC (rev 16922)
@@ -0,0 +1,118 @@
+# -*- Python -*-
+[pylithapp]
+
+# ----------------------------------------------------------------------
+# journal
+# ----------------------------------------------------------------------
+[pylithapp.journal.info]
+timedependent = 1
+implicit = 1
+petsc = 1
+solverlinear = 1
+meshiocubit = 1
+implicitelasticity = 1
+#quadrature3d = 1
+#fiatlagrange = 1
+
+# ----------------------------------------------------------------------
+# mesh_generator
+# ----------------------------------------------------------------------
+[pylithapp.mesh_generator]
+#debug = 1
+reader = pylith.meshio.MeshIOCubit
+reader.use_nodeset_names = False
+
+[pylithapp.mesh_generator.reader]
+filename = volume_hex8.exo
+
+coordsys = spatialdata.geocoords.CSGeoProj
+coordsys.projector.projection = tmerc
+coordsys.projector.proj-options = +lon_0=-118.2467 +lat_0=34.0550
+coordsys.datum_vert = mean sea level
+
+# ----------------------------------------------------------------------
+# problem
+# ----------------------------------------------------------------------
+[pylithapp.timedependent]
+dimension = 3
+bc = [bc_east,bc_west,bc_bottom]
+
+[pylithapp.timedependent.formulation.time_step]
+total_time = 0.0*s
+
+# ----------------------------------------------------------------------
+# materials
+# ----------------------------------------------------------------------
+[pylithapp.timedependent]
+materials = [elastic]
+materials.elastic = pylith.materials.ElasticIsotropic3D
+
+[pylithapp.timedependent.materials.elastic]
+label = Elastic material
+id = 1
+
+db_properties = spatialdata.spatialdb.SCECCVMH
+db_properties.data_dir = /Users/baagaard/data/sceccvm-h/vx53/bin
+db_properties.squash = True
+db_properties.squash_limit = -8.0*km
+#db_properties = spatialdata.spatialdb.SimpleDB
+#db_properties.iohandler.filename = mat_homogeneous.spatialdb
+
+quadrature.cell = pylith.feassemble.FIATLagrange
+quadrature.cell.dimension = 3
+quadrature.cell.quad_order = 2
+
+# ----------------------------------------------------------------------
+# boundary conditions
+# ----------------------------------------------------------------------
+[pylithapp.timedependent.bc.bc_east]
+bc_dof = [0, 1]
+label = 21
+db_initial = spatialdata.spatialdb.UniformDB
+db_initial.label = Dirichlet BC east surface
+db_initial.values = [displacement-x,displacement-y]
+db_initial.data = [0.0*m,-2.0*m]
+
+[pylithapp.timedependent.bc.bc_west]
+bc_dof = [0, 1]
+label = 22
+db_initial = spatialdata.spatialdb.UniformDB
+db_initial.label = Dirichlet BC west surface
+db_initial.values = [displacement-x,displacement-y]
+db_initial.data = [0.0*m,+2.0*m]
+
+[pylithapp.timedependent.bc.bc_bottom]
+bc_dof = [2]
+label = 26
+db_initial = spatialdata.spatialdb.UniformDB
+db_initial.label = Dirichlet BC bottom surface
+db_initial.values = [displacement-z]
+db_initial.data = [0.0*m]
+
+# ----------------------------------------------------------------------
+# PETSc
+# ----------------------------------------------------------------------
+[pylithapp.petsc]
+ksp_rtol = 1.0e-8
+pc_type = asm
+
+sub_pc_factor_shift_type = nonzero
+
+ksp_max_it = 200
+ksp_gmres_restart = 50
+ksp_monitor = true
+ksp_view = true
+log_summary = true
+# start_in_debugger = true
+
+# ----------------------------------------------------------------------
+# output
+# ----------------------------------------------------------------------
+# Give basename for VTK domain output of solution over domain.
+[pylithapp.problem.formulation.output.output.writer]
+filename = volume-dislocation.vtk
+
+# Give basename for VTK output of state variables.
+[pylithapp.timedependent.materials.elastic.output]
+cell_filter = pylith.meshio.CellFilterAvgMesh
+writer.filename = volume-dislocation-elastic.vtk
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