[cig-commits] r16762 - short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205

surendra at geodynamics.org surendra at geodynamics.org
Sat May 22 00:46:11 PDT 2010


Author: surendra
Date: 2010-05-22 00:46:11 -0700 (Sat, 22 May 2010)
New Revision: 16762

Removed:
   short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205/test.cfg
   short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205/test.exo.gz
   short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205/test.jou
Log:
Removed some unnecessary files in TPV205

Deleted: short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205/test.cfg
===================================================================
--- short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205/test.cfg	2010-05-22 07:19:58 UTC (rev 16761)
+++ short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205/test.cfg	2010-05-22 07:46:11 UTC (rev 16762)
@@ -1,219 +0,0 @@
-# -*- Python -*-
-
-[pylithapp]
-
-# ----------------------------------------------------------------------
-# journal
-# ----------------------------------------------------------------------
-[pylithapp.journal.info]
-timedependent = 1
-#absorbingdampers = 1
-#explicit = 1
-#petsc = 1
-#meshiocubit = 1
-#explicitelasticity = 1
-#quadrature2d = 1
-#fiatlagrange = 1
-#faultcohesivedyn = 1
-
-[pylithapp.journal.debug]
-#pylithapp = 1
-#problem = 1
-#explicit = 1
-
-# ----------------------------------------------------------------------
-# mesh_generator
-# ----------------------------------------------------------------------
-[pylithapp.mesh_generator]
-reader = pylith.meshio.MeshIOCubit
-
-[pylithapp.mesh_generator.reader]
-filename = test.exo
-coordsys.space_dim = 3
-
-# ----------------------------------------------------------------------
-# problem
-# ----------------------------------------------------------------------
-[pylithapp.timedependent]
-
-dimension = 3
-
-# Set interfaces to an array with 1 faults: 'fault'.
-interfaces = [fault]
-
-# Set materials to an array with 1 material 'elastic'.
-materials = [elastic]
-
-#formulation = pylith.problems.Explicit
-#formulation.solver = pylith.problems.SolverNonlinear
-formulation = pylith.problems.ExplicitLumped
-
-# Nondimensionalize problem using wave propagation parameters.
-normalizer = spatialdata.units.NondimElasticDynamic
- 
-bc = [x_neg,x_pos,z_neg,y_neg,y_pos]
-
-# Change the DirichletPoints BC to the AbsorbingDampers BC
-bc.x_neg = pylith.bc.AbsorbingDampers
-bc.x_pos = pylith.bc.AbsorbingDampers
-bc.z_neg = pylith.bc.AbsorbingDampers
-bc.y_neg = pylith.bc.AbsorbingDampers
-bc.y_pos = pylith.bc.AbsorbingDampers
-
-[pylithapp.timedependent.formulation.time_step]
-total_time = 1.0*s
-dt = 0.01*s
-
-
-# ----------------------------------------------------------------------
-# materials
-# ----------------------------------------------------------------------
-[pylithapp.timedependent]
-
-materials = [elastic]
-materials.elastic = pylith.materials.ElasticIsotropic3D
-
-[pylithapp.timedependent.materials.elastic]
-label = Elastic material
-id = 1
-db_properties.iohandler.filename = matprops.spatialdb
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 3
-
-
-# ----------------------------------------------------------------------
-# boundary conditions
-# ----------------------------------------------------------------------
-[pylithapp.timedependent.bc.x_pos]
-label = 26
-db.label = Absorbing BC +x
-db.iohandler.filename = matprops.spatialdb
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 2
-
-[pylithapp.timedependent.bc.x_neg]
-label = 27
-db.label = Absorbing BC -x
-db.iohandler.filename = matprops.spatialdb
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 2
-
-[pylithapp.timedependent.bc.z_neg]
-label = 28
-up_dir = [0, 1, 0]
-db.label = Absorbing BC -z
-db.iohandler.filename = matprops.spatialdb
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 2
-
-[pylithapp.timedependent.bc.y_pos]
-label = 22
-db.label = Absorbing BC +y
-db.iohandler.filename = matprops.spatialdb
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 2
-
-[pylithapp.timedependent.bc.y_neg]
-label = 23
-db.label = Absorbing BC -y
-db.iohandler.filename = matprops.spatialdb
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 2
-
-
-# ----------------------------------------------------------------------
-# faults
-# ----------------------------------------------------------------------
-
-# Provide information on the fault (interface).
-[pylithapp.timedependent.interfaces]
-
-fault = pylith.faults.FaultCohesiveDyn
-
-[pylithapp.timedependent.interfaces.fault]
-
-# Material id
-id = 100
-
-# Nodeset id from CUBIT
-label = 10
-
-# Specify the basis functions and quadrature:
-# 1-D Lagrange cell in 2-D space with 2nd order quadrature
-quadrature.cell = pylith.feassemble.FIATLagrange
-quadrature.cell.dimension = 2
-quadrature.cell.quad_order = 2
-
-db_initial_tractions = spatialdata.spatialdb.SimpleDB
-db_initial_tractions.iohandler.filename = tractions.spatialdb
-db_initial_tractions.label = "Initial fault tractions"
-
-friction = pylith.friction.SlipWeakening
-
-#friction.db_properties = spatialdata.spatialdb.UniformDB
-friction.db_properties = spatialdata.spatialdb.SimpleDB
-friction.db_properties.iohandler.filename = frictpars.spatialdb
-friction.db_properties.label = Slip weakening
-#friction.db_properties.values = [static-coefficient,dynamic-coefficient,slip-weakening-parameter,cohesion]
-#friction.db_properties.data = [0.677,0.525,0.4*m,0.0*Pa]
-
-
-# ----------------------------------------------------------------------
-# PETSc
-# ----------------------------------------------------------------------
-[pylithapp.petsc]
-pc_type = asm
-
-# Change the preconditioner settings.
-sub_pc_factor_shift_type = nonzero
-
-ksp_rtol = 1.0e-8
-ksp_atol = 1.0e-15
-ksp_max_it = 100
-ksp_gmres_restart = 50
-snes_max_it = 200
-
-#ksp_monitor = true
-#ksp_view = true
-ksp_converged_reason = true
-
-#snes_monitor = true
-snes_view = true
-snes_converged_reason = true
-
-# Friction sensitivity solve
-friction_pc_type = asm
-friction_sub_pc_factor_shift_type = nonzero
-
-friction_ksp_max_it = 25
-friction_ksp_gmres_restart = 30
-
-#friction_ksp_monitor = true
-#friction_ksp_view = true
-friction_ksp_converged_reason = true
-
-# ----------------------------------------------------------------------
-# output
-# ----------------------------------------------------------------------
-# Give basename for VTK domain output of solution over domain.
-[pylithapp.problem.formulation.output.output]
-output_freq = time_step
-time_step = 0.05*s
-writer.filename = output/test.vtk
-writer.time_format = %05.2f
-
-# Give basename for VTK fault output.
-[pylithapp.timedependent.interfaces.fault.output]
-output_freq = time_step
-time_step = 0.05*s
-vertex_info_fields = [strike_dir,normal_dir,initial_traction]
-writer.filename = output/test-fault.vtk
-writer.time_format = %05.2f
-
-# Give basename for VTK output of state variables.
-[pylithapp.timedependent.materials.elastic.output]
-output_freq = time_step
-time_step = 1.0*s
-cell_filter = pylith.meshio.CellFilterAvgMesh
-writer.filename = output/test-elastic.vtk
-writer.time_format = %05.2f

Deleted: short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205/test.exo.gz
===================================================================
(Binary files differ)

Deleted: short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205/test.jou
===================================================================
--- short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205/test.jou	2010-05-22 07:19:58 UTC (rev 16761)
+++ short/3D/PyLith/benchmarks/trunk/dynamic/scecdynrup/tpv205/test.jou	2010-05-22 07:46:11 UTC (rev 16762)
@@ -1,138 +0,0 @@
-# ----------------------------------------------------------------------
-# Create block
-# ----------------------------------------------------------------------
-
-# Block is 8 km x 2 km x 6.5 km
-# -4 km <= x <= 4 km
-# -1 km <= y <= 1 km
-# -6.5 km <= z <= 0 km
-reset
-brick x 8000 y 2000 z 6500
-
-# Translate block so the top is at z=0
-volume 1 move x 0 y 0 z -3250
-
-# ----------------------------------------------------------------------
-# Create interface surfaces
-# ----------------------------------------------------------------------
-create planar surface with plane yplane offset 0
-surface 7 name "fault_surface"
-
-# ----------------------------------------------------------------------
-# Divide volumes using interface surfaces
-# ----------------------------------------------------------------------
-webcut volume 1 with plane surface fault_surface
-
-# ----------------------------------------------------------------------
-# Imprint all volumes, merging surfaces
-# ----------------------------------------------------------------------
-imprint all with volume all
-merge all
-
-
-
-
-# ----------------------------------------------------------------------
-# Set discretization size
-# ----------------------------------------------------------------------
-volume all size 100
-
-# ----------------------------------------------------------------------
-# Generate the mesh
-# ----------------------------------------------------------------------
-volume all scheme submap
-mesh volume all
-
-# ----------------------------------------------------------------------
-# Create blocks for materials
-# ----------------------------------------------------------------------
-block 1 volume 1 3
-block 1 name "elastic"
-
-# ----------------------------------------------------------------------
-# Create nodesets for faults
-# ----------------------------------------------------------------------
-group "fault" add node in surface fault_surface
-group "fault" remove node with x_coord > +3.5001e+3
-group "fault" remove node with x_coord < -3.5001e+3
-group "fault" remove node with z_coord < -6.0001e+3
-nodeset 10 group fault
-nodeset 10 name "fault"
-
-# ----------------------------------------------------------------------
-# Create nodeset for +x face
-# ----------------------------------------------------------------------
-group "face_xpos" add node in surface 10
-group "face_xpos" add node in surface 17
-nodeset 20 group face_xpos
-nodeset 20 name "face xpos"
-
-# ----------------------------------------------------------------------
-# Create nodeset for -x face
-# ----------------------------------------------------------------------
-group "face_xneg" add node in surface 14
-group "face_xneg" add node in surface 12
-nodeset 21 group face_xneg
-nodeset 21 name "face xneg"
-
-# ----------------------------------------------------------------------
-# Create nodeset for +y face
-# ----------------------------------------------------------------------
-group "face_ypos" add node in surface 5
-nodeset 22 group face_ypos
-nodeset 22 name "face ypos"
-
-# ----------------------------------------------------------------------
-# Create nodeset for -y face
-# ----------------------------------------------------------------------
-group "face_yneg" add node in surface 3
-nodeset 23 group face_yneg
-nodeset 23 name "face yneg"
-
-# ----------------------------------------------------------------------
-# Create nodeset for +z face
-# ----------------------------------------------------------------------
-group "face_zpos" add node in surface 16
-group "face_zpos" add node in surface 9
-nodeset 24 group face_zpos
-nodeset 24 name "face zpos"
-
-# ----------------------------------------------------------------------
-# Create nodeset for -z face
-# ----------------------------------------------------------------------
-group "face_zneg" add node in surface 11
-group "face_zneg" add node in surface 15
-nodeset 25 group face_zneg
-nodeset 25 name "face zneg"
-
-# ----------------------------------------------------------------------
-# Create nodeset for +x face
-# ----------------------------------------------------------------------
-group "face_xpos_nofault" add node in face_xpos
-group "face_xpos_nofault" remove node in fault
-nodeset 26 group face_xpos_nofault
-nodeset 26 name "face xpos nofault"
-
-# ----------------------------------------------------------------------
-# Create nodeset for -x face
-# ----------------------------------------------------------------------
-group "face_xneg_nofault" add node in face_xneg
-group "face_xneg_nofault" remove node in fault
-nodeset 27 group face_xneg_nofault
-nodeset 27 name "face xneg nofault"
-
-# ----------------------------------------------------------------------
-# Create nodeset for -z face
-# ----------------------------------------------------------------------
-group "face_zneg_nofault" add node in face_zneg
-group "face_zneg_nofault" remove node in fault
-nodeset 28 group face_zneg_nofault
-nodeset 28 name "face zneg nofault"
-
-# ----------------------------------------------------------------------
-# Export exodus file
-# ----------------------------------------------------------------------
-export mesh "test.exo" dimension 3 overwrite
-
-
-



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