[cig-commits] r18204 - seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs

[carltape at geodynamics.org]

Author: carltape
Date: 2011-04-08 12:29:22 -0700 (Fri, 08 Apr 2011)
New Revision: 18204

Modified:
   seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_generate_databases_pbs.bash
   seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_mesher_pbs.bash
   seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_solver_pbs.bash
Log:
minor changes to pbs run scripts


Modified: seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_generate_databases_pbs.bash
===================================================================
--- seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_generate_databases_pbs.bash	2011-04-08 16:33:38 UTC (rev 18203)
+++ seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_generate_databases_pbs.bash	2011-04-08 19:29:22 UTC (rev 18204)
@@ -2,7 +2,7 @@
 #PBS -S /bin/bash
 
 ## job name and output file
-#PBS -N go_mesher
+#PBS -N go_database
 #PBS -j oe
 #PBS -o in_out_files/OUTPUT_FILES/$PBS_JOBID.o
 
@@ -34,7 +34,7 @@
 #rm -rf in_out_files/OUTPUT_FILES/src
 #cp -rp ./src in_out_files/OUTPUT_FILES/
 
-# obtain lsf job information
+# obtain job information
 cat $PBS_NODEFILE > in_out_files/OUTPUT_FILES/compute_nodes
 echo "$PBS_JOBID" > in_out_files/OUTPUT_FILES/jobid
 

Modified: seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_mesher_pbs.bash
===================================================================
--- seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_mesher_pbs.bash	2011-04-08 16:33:38 UTC (rev 18203)
+++ seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_mesher_pbs.bash	2011-04-08 19:29:22 UTC (rev 18204)
@@ -22,15 +22,17 @@
 numnodes=$NPROC
 
 mkdir -p in_out_files/OUTPUT_FILES
+mkdir -p in_out_files/DATABASES_MPI
 
 # backup files used for this simulation
 cp in_data_files/Par_file in_out_files/OUTPUT_FILES/
+cp in_data_files/meshfem3D_files/Mesh_Par_file in_out_files/OUTPUT_FILES/
 
 # save a complete copy of source files
 #rm -rf in_out_files/OUTPUT_FILES/src
 #cp -rp ./src in_out_files/OUTPUT_FILES/
 
-# obtain lsf job information
+# obtain pbs job information
 cat $PBS_NODEFILE > in_out_files/OUTPUT_FILES/compute_nodes
 echo "$PBS_JOBID" > in_out_files/OUTPUT_FILES/jobid
 

Modified: seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_solver_pbs.bash
===================================================================
--- seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_solver_pbs.bash	2011-04-08 16:33:38 UTC (rev 18203)
+++ seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_solver_pbs.bash	2011-04-08 19:29:22 UTC (rev 18204)
@@ -36,7 +36,7 @@
 #rm -rf in_out_files/OUTPUT_FILES/src
 #cp -rp ./src in_out_files/OUTPUT_FILES/
 
-# obtain lsf job information
+# obtain job information
 cat $PBS_NODEFILE > in_out_files/OUTPUT_FILES/compute_nodes
 echo "$PBS_JOBID" > in_out_files/OUTPUT_FILES/jobid