[cig-commits] r17989 - in seismo/2D/SPECFEM2D/trunk: . EXAMPLES/Abel_Brest EXAMPLES/M2_UPPA EXAMPLES/Tape2007 EXAMPLES/Tromp2005 EXAMPLES/canyon EXAMPLES/fluid_solid doc/USER_MANUAL src
danielpeter at geodynamics.org
danielpeter at geodynamics.org
Mon Feb 28 14:43:19 PST 2011
Author: danielpeter
Date: 2011-02-28 14:43:18 -0800 (Mon, 28 Feb 2011)
New Revision: 17989
Modified:
seismo/2D/SPECFEM2D/trunk/EXAMPLES/Abel_Brest/process.sh
seismo/2D/SPECFEM2D/trunk/EXAMPLES/M2_UPPA/process.sh
seismo/2D/SPECFEM2D/trunk/EXAMPLES/Tape2007/process.sh
seismo/2D/SPECFEM2D/trunk/EXAMPLES/Tromp2005/process.sh
seismo/2D/SPECFEM2D/trunk/EXAMPLES/canyon/process.sh
seismo/2D/SPECFEM2D/trunk/EXAMPLES/fluid_solid/process.sh
seismo/2D/SPECFEM2D/trunk/Makefile.in
seismo/2D/SPECFEM2D/trunk/configure
seismo/2D/SPECFEM2D/trunk/convolve_source_timefunction.csh
seismo/2D/SPECFEM2D/trunk/doc/USER_MANUAL/manual_SPECFEM2D.pdf
seismo/2D/SPECFEM2D/trunk/doc/USER_MANUAL/manual_SPECFEM2D.tex
seismo/2D/SPECFEM2D/trunk/src/get_MPI.F90
Log:
updates configure script, puts compiled binaries into bin/ subdirectory; fixes problem with MPI deadlocks
Modified: seismo/2D/SPECFEM2D/trunk/EXAMPLES/Abel_Brest/process.sh
===================================================================
--- seismo/2D/SPECFEM2D/trunk/EXAMPLES/Abel_Brest/process.sh 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/EXAMPLES/Abel_Brest/process.sh 2011-02-28 22:43:18 UTC (rev 17989)
@@ -34,8 +34,9 @@
cd $currentdir
# links executables
-ln -s ../../xmeshfem2D
-ln -s ../../xspecfem2D
+rm -f xmeshfem2D xspecfem2D
+ln -s ../../bin/xmeshfem2D
+ln -s ../../bin/xspecfem2D
# stores setup
cp DATA/Par_file OUTPUT_FILES/
Modified: seismo/2D/SPECFEM2D/trunk/EXAMPLES/M2_UPPA/process.sh
===================================================================
--- seismo/2D/SPECFEM2D/trunk/EXAMPLES/M2_UPPA/process.sh 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/EXAMPLES/M2_UPPA/process.sh 2011-02-28 22:43:18 UTC (rev 17989)
@@ -34,8 +34,9 @@
cd $currentdir
# links executables
-ln -s ../../xmeshfem2D
-ln -s ../../xspecfem2D
+rm -f xmeshfem2D xspecfem2D
+ln -s ../../bin/xmeshfem2D
+ln -s ../../bin/xspecfem2D
# stores setup
cp DATA/Par_file OUTPUT_FILES/
Modified: seismo/2D/SPECFEM2D/trunk/EXAMPLES/Tape2007/process.sh
===================================================================
--- seismo/2D/SPECFEM2D/trunk/EXAMPLES/Tape2007/process.sh 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/EXAMPLES/Tape2007/process.sh 2011-02-28 22:43:18 UTC (rev 17989)
@@ -34,8 +34,9 @@
cd $currentdir
# links executables
-ln -s ../../xmeshfem2D
-ln -s ../../xspecfem2D
+rm -f xmeshfem2D xspecfem2D
+ln -s ../../bin/xmeshfem2D
+ln -s ../../bin/xspecfem2D
# stores setup
cp DATA/Par_file OUTPUT_FILES/
Modified: seismo/2D/SPECFEM2D/trunk/EXAMPLES/Tromp2005/process.sh
===================================================================
--- seismo/2D/SPECFEM2D/trunk/EXAMPLES/Tromp2005/process.sh 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/EXAMPLES/Tromp2005/process.sh 2011-02-28 22:43:18 UTC (rev 17989)
@@ -34,8 +34,9 @@
cd $currentdir
# links executables
-ln -s ../../xmeshfem2D
-ln -s ../../xspecfem2D
+rm -f xmeshfem2D xspecfem2D
+ln -s ../../bin/xmeshfem2D
+ln -s ../../bin/xspecfem2D
# stores setup
cp DATA/Par_file OUTPUT_FILES/
Modified: seismo/2D/SPECFEM2D/trunk/EXAMPLES/canyon/process.sh
===================================================================
--- seismo/2D/SPECFEM2D/trunk/EXAMPLES/canyon/process.sh 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/EXAMPLES/canyon/process.sh 2011-02-28 22:43:18 UTC (rev 17989)
@@ -34,8 +34,9 @@
cd $currentdir
# links executables
-ln -s ../../xmeshfem2D
-ln -s ../../xspecfem2D
+rm -f xmeshfem2D xspecfem2D
+ln -s ../../bin/xmeshfem2D
+ln -s ../../bin/xspecfem2D
# stores setup
cp DATA/Par_file OUTPUT_FILES/
Modified: seismo/2D/SPECFEM2D/trunk/EXAMPLES/fluid_solid/process.sh
===================================================================
--- seismo/2D/SPECFEM2D/trunk/EXAMPLES/fluid_solid/process.sh 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/EXAMPLES/fluid_solid/process.sh 2011-02-28 22:43:18 UTC (rev 17989)
@@ -34,8 +34,9 @@
cd $currentdir
# links executables
-ln -s ../../xmeshfem2D
-ln -s ../../xspecfem2D
+rm -f xmeshfem2D xspecfem2D
+ln -s ../../bin/xmeshfem2D
+ln -s ../../bin/xspecfem2D
# stores setup
cp DATA/Par_file OUTPUT_FILES/
Modified: seismo/2D/SPECFEM2D/trunk/Makefile.in
===================================================================
--- seismo/2D/SPECFEM2D/trunk/Makefile.in 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/Makefile.in 2011-02-28 22:43:18 UTC (rev 17989)
@@ -61,20 +61,13 @@
MPIFC = @MPIFC@
MPILIBS = @MPILIBS@
-FLAGS_CHECK = @FLAGS_CHECK@
-FLAGS_NO_CHECK = @FLAGS_NO_CHECK@
+FLAGS_CHECK = @FLAGS_CHECK@ -Isetup
+FLAGS_NO_CHECK = @FLAGS_NO_CHECK@ -Isetup
-#FCFLAGS_f90 = @FCFLAGS_f90@
-
-
CC = @CC@
-CFLAGS = @CFLAGS@ $(CPPFLAGS)
CPPFLAGS = @CPPFLAGS@ $(COND_MPI_CPPFLAGS)
+CFLAGS = @CFLAGS@ $(CPPFLAGS) -Isetup
-#AR = ar
-#ARFLAGS = cru
-#RANLIB = ranlib
-
## serial or parallel
@COND_MPI_TRUE at F90 = $(MPIFC) $(FCFLAGS) -DUSE_MPI -DUSE_SCOTCH -I"@SCOTCH_INCLUDEDIR@" $(MPILIBS)
@COND_MPI_FALSE at F90 = $(FC) $(FCFLAGS)
@@ -88,6 +81,16 @@
LINK = $(F90)
+## compilation directories
+## E : executables directory
+E = ./bin
+## source file directory
+S_TOP = @srcdir@
+S = @srcdir@/src
+## setup file directory
+SETUP = @srcdir@/setup
+
+
##.PHONY: clean default all backup bak generate_databases specfem3D meshfem3D
####
@@ -187,7 +190,7 @@
all: default
-required: obj
+required: obj bin
mesh : meshfem2D
spec : specfem2D
@@ -212,7 +215,7 @@
clean:
- (rm -rf obj xmeshfem2D xmeshfem2D.trace \
+ (rm -rf obj bin xmeshfem2D xmeshfem2D.trace \
xspecfem2D xspecfem2D.trace \
$O/*.o *.o $O/*.il *.mod core \
xconvolve_source_timefunction \
@@ -234,256 +237,259 @@
## mesher
##
xmeshfem2D: required $(OBJS_MESHFEM2D)
- $(LINK) $(FLAGS_CHECK) -o xmeshfem2D $(OBJS_MESHFEM2D) $(LIB)
+ $(LINK) $(FLAGS_CHECK) -o ${E}/xmeshfem2D $(OBJS_MESHFEM2D) $(LIB)
##
## solver
##
### use optimized compilation option for solver only
xspecfem2D: required $(OBJS_SPECFEM2D)
- $(LINK) $(FLAGS_NO_CHECK) -o xspecfem2D $(OBJS_SPECFEM2D)
+ $(LINK) $(FLAGS_NO_CHECK) -o ${E}/xspecfem2D $(OBJS_SPECFEM2D)
##
## convolve_source_timefunction
##
xconvolve_source_timefunction: required $O/convolve_source_timefunction.o
- ${F90} $(FLAGS_CHECK) -o xconvolve_source_timefunction $O/convolve_source_timefunction.o
+ ${F90} $(FLAGS_CHECK) -o ${E}/xconvolve_source_timefunction $O/convolve_source_timefunction.o
##
## check_quality_external_mesh
##
xcheck_quality_external_mesh: required $O/check_quality_external_mesh.o $O/read_value_parameters.o
- ${F90} $(FLAGS_CHECK) -o xcheck_quality_external_mesh $O/check_quality_external_mesh.o $O/read_value_parameters.o
+ ${F90} $(FLAGS_CHECK) -o ${E}/xcheck_quality_external_mesh $O/check_quality_external_mesh.o $O/read_value_parameters.o
-$O/checkgrid.o: checkgrid.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/checkgrid.o checkgrid.F90
+##
+## object files
+##
+$O/checkgrid.o: ${S}/checkgrid.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/checkgrid.o ${S}/checkgrid.F90
-$O/meshfem2D.o: meshfem2D.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/meshfem2D.o meshfem2D.F90
+$O/meshfem2D.o: ${S}/meshfem2D.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/meshfem2D.o ${S}/meshfem2D.F90
-$O/read_interfaces_file.o: read_interfaces_file.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/read_interfaces_file.o read_interfaces_file.f90
+$O/read_interfaces_file.o: ${S}/read_interfaces_file.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/read_interfaces_file.o ${S}/read_interfaces_file.f90
-$O/read_materials.o: read_materials.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/read_materials.o read_materials.f90
+$O/read_materials.o: ${S}/read_materials.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/read_materials.o ${S}/read_materials.f90
-$O/read_parameter_file.o: read_parameter_file.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/read_parameter_file.o read_parameter_file.F90
+$O/read_parameter_file.o: ${S}/read_parameter_file.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/read_parameter_file.o ${S}/read_parameter_file.F90
-$O/read_regions.o: read_regions.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/read_regions.o read_regions.f90
+$O/read_regions.o: ${S}/read_regions.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/read_regions.o ${S}/read_regions.f90
-$O/read_source_file.o: read_source_file.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/read_source_file.o read_source_file.f90
+$O/read_source_file.o: ${S}/read_source_file.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/read_source_file.o ${S}/read_source_file.f90
-$O/get_node_number.o: get_node_number.f90
- ${F90} $(FLAGS_CHECK) -c -o $O/get_node_number.o get_node_number.f90
+$O/get_node_number.o: ${S}/get_node_number.f90
+ ${F90} $(FLAGS_CHECK) -c -o $O/get_node_number.o ${S}/get_node_number.f90
-$O/createnum_fast.o: createnum_fast.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/createnum_fast.o createnum_fast.f90
+$O/createnum_fast.o: ${S}/createnum_fast.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/createnum_fast.o ${S}/createnum_fast.f90
-$O/createnum_slow.o: createnum_slow.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/createnum_slow.o createnum_slow.f90
+$O/createnum_slow.o: ${S}/createnum_slow.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/createnum_slow.o ${S}/createnum_slow.f90
-$O/convolve_source_timefunction.o: convolve_source_timefunction.f90
- ${F90} $(FLAGS_CHECK) -c -o $O/convolve_source_timefunction.o convolve_source_timefunction.f90
+$O/convolve_source_timefunction.o: ${S}/convolve_source_timefunction.f90
+ ${F90} $(FLAGS_CHECK) -c -o $O/convolve_source_timefunction.o ${S}/convolve_source_timefunction.f90
-$O/check_quality_external_mesh.o: check_quality_external_mesh.f90
- ${F90} $(FLAGS_CHECK) -c -o $O/check_quality_external_mesh.o check_quality_external_mesh.f90
+$O/check_quality_external_mesh.o: ${S}/check_quality_external_mesh.f90
+ ${F90} $(FLAGS_CHECK) -c -o $O/check_quality_external_mesh.o ${S}/check_quality_external_mesh.f90
-$O/read_value_parameters.o: read_value_parameters.f90
- ${F90} $(FLAGS_CHECK) -c -o $O/read_value_parameters.o read_value_parameters.f90
+$O/read_value_parameters.o: ${S}/read_value_parameters.f90
+ ${F90} $(FLAGS_CHECK) -c -o $O/read_value_parameters.o ${S}/read_value_parameters.f90
-$O/datim.o: datim.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/datim.o datim.f90
+$O/datim.o: ${S}/datim.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/datim.o ${S}/datim.f90
-$O/lagrange_poly.o: lagrange_poly.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/lagrange_poly.o lagrange_poly.f90
+$O/lagrange_poly.o: ${S}/lagrange_poly.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/lagrange_poly.o ${S}/lagrange_poly.f90
-$O/gmat01.o: gmat01.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/gmat01.o gmat01.f90
+$O/gmat01.o: ${S}/gmat01.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/gmat01.o ${S}/gmat01.f90
-$O/gll_library.o: gll_library.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/gll_library.o gll_library.f90
+$O/gll_library.o: ${S}/gll_library.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/gll_library.o ${S}/gll_library.f90
-$O/define_derivation_matrices.o: define_derivation_matrices.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/define_derivation_matrices.o define_derivation_matrices.f90
+$O/define_derivation_matrices.o: ${S}/define_derivation_matrices.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/define_derivation_matrices.o ${S}/define_derivation_matrices.f90
-$O/plotgll.o: plotgll.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/plotgll.o plotgll.f90
+$O/plotgll.o: ${S}/plotgll.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/plotgll.o ${S}/plotgll.f90
-$O/plotpost.o: plotpost.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/plotpost.o plotpost.F90
+$O/plotpost.o: ${S}/plotpost.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/plotpost.o ${S}/plotpost.F90
-$O/locate_receivers.o: locate_receivers.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/locate_receivers.o locate_receivers.F90
+$O/locate_receivers.o: ${S}/locate_receivers.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/locate_receivers.o ${S}/locate_receivers.F90
-$O/recompute_jacobian.o: recompute_jacobian.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/recompute_jacobian.o recompute_jacobian.f90
+$O/recompute_jacobian.o: ${S}/recompute_jacobian.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/recompute_jacobian.o ${S}/recompute_jacobian.f90
-$O/locate_source_force.o: locate_source_force.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/locate_source_force.o locate_source_force.F90
+$O/locate_source_force.o: ${S}/locate_source_force.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/locate_source_force.o ${S}/locate_source_force.F90
-$O/locate_source_moment_tensor.o: locate_source_moment_tensor.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/locate_source_moment_tensor.o locate_source_moment_tensor.F90
+$O/locate_source_moment_tensor.o: ${S}/locate_source_moment_tensor.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/locate_source_moment_tensor.o ${S}/locate_source_moment_tensor.F90
-$O/define_shape_functions.o: define_shape_functions.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/define_shape_functions.o define_shape_functions.f90
+$O/define_shape_functions.o: ${S}/define_shape_functions.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/define_shape_functions.o ${S}/define_shape_functions.f90
-$O/attenuation_model.o: attenuation_model.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/attenuation_model.o attenuation_model.f90
+$O/attenuation_model.o: ${S}/attenuation_model.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/attenuation_model.o ${S}/attenuation_model.f90
-$O/get_poroelastic_velocities.o: get_poroelastic_velocities.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/get_poroelastic_velocities.o get_poroelastic_velocities.f90
+$O/get_poroelastic_velocities.o: ${S}/get_poroelastic_velocities.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/get_poroelastic_velocities.o ${S}/get_poroelastic_velocities.f90
### use optimized compilation option for solver only
-$O/specfem2D.o: specfem2D.F90 constants.h
- ${F90} $(FLAGS_NO_CHECK) -c -o $O/specfem2D.o specfem2D.F90
+$O/specfem2D.o: ${S}/specfem2D.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_NO_CHECK) -c -o $O/specfem2D.o ${S}/specfem2D.F90
### use optimized compilation option for solver only
-$O/enforce_acoustic_free_surface.o: enforce_acoustic_free_surface.f90 constants.h
- ${F90} $(FLAGS_NO_CHECK) -c -o $O/enforce_acoustic_free_surface.o enforce_acoustic_free_surface.f90
+$O/enforce_acoustic_free_surface.o: ${S}/enforce_acoustic_free_surface.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_NO_CHECK) -c -o $O/enforce_acoustic_free_surface.o ${S}/enforce_acoustic_free_surface.f90
### use optimized compilation option for solver only
-$O/compute_forces_acoustic.o: compute_forces_acoustic.f90 constants.h
- ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_forces_acoustic.o compute_forces_acoustic.f90
+$O/compute_forces_acoustic.o: ${S}/compute_forces_acoustic.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_forces_acoustic.o ${S}/compute_forces_acoustic.f90
### use optimized compilation option for solver only
-$O/compute_forces_viscoelastic.o: compute_forces_viscoelastic.f90 constants.h
- ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_forces_viscoelastic.o compute_forces_viscoelastic.f90
+$O/compute_forces_viscoelastic.o: ${S}/compute_forces_viscoelastic.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_forces_viscoelastic.o ${S}/compute_forces_viscoelastic.f90
### use optimized compilation option for solver only
-$O/compute_forces_poro_solid.o: compute_forces_poro_solid.f90 constants.h
- ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_forces_poro_solid.o compute_forces_poro_solid.f90
+$O/compute_forces_poro_solid.o: ${S}/compute_forces_poro_solid.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_forces_poro_solid.o ${S}/compute_forces_poro_solid.f90
### use optimized compilation option for solver only
-$O/compute_forces_poro_fluid.o: compute_forces_poro_fluid.f90 constants.h
- ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_forces_poro_fluid.o compute_forces_poro_fluid.f90
+$O/compute_forces_poro_fluid.o: ${S}/compute_forces_poro_fluid.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_forces_poro_fluid.o ${S}/compute_forces_poro_fluid.f90
### use optimized compilation option for solver only
-$O/compute_gradient_attenuation.o: compute_gradient_attenuation.f90 constants.h
- ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_gradient_attenuation.o compute_gradient_attenuation.f90
+$O/compute_gradient_attenuation.o: ${S}/compute_gradient_attenuation.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_gradient_attenuation.o ${S}/compute_gradient_attenuation.f90
-$O/check_stability.o: check_stability.F90 constants.h
- ${F90} $(FLAGS_NO_CHECK) -c -o $O/check_stability.o check_stability.F90
+$O/check_stability.o: ${S}/check_stability.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_NO_CHECK) -c -o $O/check_stability.o ${S}/check_stability.F90
-$O/calendar.o: calendar.f90
- ${F90} $(FLAGS_CHECK) -c -o $O/calendar.o calendar.f90
+$O/calendar.o: ${S}/calendar.f90
+ ${F90} $(FLAGS_CHECK) -c -o $O/calendar.o ${S}/calendar.f90
-$O/convert_time.o: convert_time.f90
- ${F90} $(FLAGS_CHECK) -c -o $O/convert_time.o convert_time.f90
+$O/convert_time.o: ${S}/convert_time.f90
+ ${F90} $(FLAGS_CHECK) -c -o $O/convert_time.o ${S}/convert_time.f90
-$O/compute_energy.o: compute_energy.f90 constants.h
- ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_energy.o compute_energy.f90
+$O/compute_energy.o: ${S}/compute_energy.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_energy.o ${S}/compute_energy.f90
-$O/compute_vector_field.o: compute_vector_field.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/compute_vector_field.o compute_vector_field.f90
+$O/compute_vector_field.o: ${S}/compute_vector_field.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/compute_vector_field.o ${S}/compute_vector_field.f90
-$O/compute_pressure.o: compute_pressure.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/compute_pressure.o compute_pressure.f90
+$O/compute_pressure.o: ${S}/compute_pressure.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/compute_pressure.o ${S}/compute_pressure.f90
-$O/compute_curl_one_element.o: compute_curl_one_element.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/compute_curl_one_element.o compute_curl_one_element.f90
+$O/compute_curl_one_element.o: ${S}/compute_curl_one_element.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/compute_curl_one_element.o ${S}/compute_curl_one_element.f90
-$O/compute_Bielak_conditions.o: compute_Bielak_conditions.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/compute_Bielak_conditions.o compute_Bielak_conditions.f90
+$O/compute_Bielak_conditions.o: ${S}/compute_Bielak_conditions.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/compute_Bielak_conditions.o ${S}/compute_Bielak_conditions.f90
-$O/compute_arrays_source.o: compute_arrays_source.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/compute_arrays_source.o compute_arrays_source.f90
+$O/compute_arrays_source.o: ${S}/compute_arrays_source.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/compute_arrays_source.o ${S}/compute_arrays_source.f90
-$O/create_color_image.o: create_color_image.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/create_color_image.o create_color_image.f90
+$O/create_color_image.o: ${S}/create_color_image.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/create_color_image.o ${S}/create_color_image.f90
-$O/save_databases.o: save_databases.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/save_databases.o save_databases.f90
+$O/save_databases.o: ${S}/save_databases.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/save_databases.o ${S}/save_databases.f90
-$O/save_gnuplot_file.o: save_gnuplot_file.f90
- ${F90} $(FLAGS_CHECK) -c -o $O/save_gnuplot_file.o save_gnuplot_file.f90
+$O/save_gnuplot_file.o: ${S}/save_gnuplot_file.f90
+ ${F90} $(FLAGS_CHECK) -c -o $O/save_gnuplot_file.o ${S}/save_gnuplot_file.f90
-$O/save_stations_file.o: save_stations_file.f90
- ${F90} $(FLAGS_CHECK) -c -o $O/save_stations_file.o save_stations_file.f90
+$O/save_stations_file.o: ${S}/save_stations_file.f90
+ ${F90} $(FLAGS_CHECK) -c -o $O/save_stations_file.o ${S}/save_stations_file.f90
-$O/spline_routines.o: spline_routines.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/spline_routines.o spline_routines.f90
+$O/spline_routines.o: ${S}/spline_routines.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/spline_routines.o ${S}/spline_routines.f90
-$O/netlib_specfun_erf.o: netlib_specfun_erf.f90
- ${F90} $(FLAGS_CHECK) -c -o $O/netlib_specfun_erf.o netlib_specfun_erf.f90
+$O/netlib_specfun_erf.o: ${S}/netlib_specfun_erf.f90
+ ${F90} $(FLAGS_CHECK) -c -o $O/netlib_specfun_erf.o ${S}/netlib_specfun_erf.f90
-$O/define_external_model.o: define_external_model.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/define_external_model.o define_external_model.f90
+$O/define_external_model.o: ${S}/define_external_model.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/define_external_model.o ${S}/define_external_model.f90
-$O/write_seismograms.o: write_seismograms.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/write_seismograms.o write_seismograms.F90
+$O/write_seismograms.o: ${S}/write_seismograms.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/write_seismograms.o ${S}/write_seismograms.F90
-$O/part_unstruct.o: part_unstruct.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/part_unstruct.o part_unstruct.F90
+$O/part_unstruct.o: ${S}/part_unstruct.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/part_unstruct.o ${S}/part_unstruct.F90
-$O/construct_acoustic_surface.o: construct_acoustic_surface.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/construct_acoustic_surface.o construct_acoustic_surface.f90
+$O/construct_acoustic_surface.o: ${S}/construct_acoustic_surface.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/construct_acoustic_surface.o ${S}/construct_acoustic_surface.f90
-$O/assemble_MPI.o: assemble_MPI.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/assemble_MPI.o assemble_MPI.F90
+$O/assemble_MPI.o: ${S}/assemble_MPI.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/assemble_MPI.o ${S}/assemble_MPI.F90
-$O/exit_mpi.o: exit_mpi.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/exit_mpi.o exit_mpi.F90
+$O/exit_mpi.o: ${S}/exit_mpi.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/exit_mpi.o ${S}/exit_mpi.F90
-$O/attenuation_compute_param.o: attenuation_compute_param.c
- ${CC} $(CFLAGS) -c -o $O/attenuation_compute_param.o attenuation_compute_param.c
+$O/attenuation_compute_param.o: ${S}/attenuation_compute_param.c
+ ${CC} $(CFLAGS) -c -o $O/attenuation_compute_param.o ${S}/attenuation_compute_param.c
-$O/paco_beyond_critical.o: paco_beyond_critical.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/paco_beyond_critical.o paco_beyond_critical.f90
+$O/paco_beyond_critical.o: ${S}/paco_beyond_critical.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/paco_beyond_critical.o ${S}/paco_beyond_critical.f90
-$O/paco_convolve_fft.o: paco_convolve_fft.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/paco_convolve_fft.o paco_convolve_fft.f90
+$O/paco_convolve_fft.o: ${S}/paco_convolve_fft.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/paco_convolve_fft.o ${S}/paco_convolve_fft.f90
-$O/prepare_absorb.o: prepare_absorb.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/prepare_absorb.o prepare_absorb.f90
+$O/prepare_absorb.o: ${S}/prepare_absorb.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/prepare_absorb.o ${S}/prepare_absorb.f90
-$O/prepare_color_image.o: prepare_color_image.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/prepare_color_image.o prepare_color_image.F90
+$O/prepare_color_image.o: ${S}/prepare_color_image.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/prepare_color_image.o ${S}/prepare_color_image.F90
-$O/prepare_initialfield.o: prepare_initialfield.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/prepare_initialfield.o prepare_initialfield.F90
+$O/prepare_initialfield.o: ${S}/prepare_initialfield.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/prepare_initialfield.o ${S}/prepare_initialfield.F90
-$O/prepare_source_time_function.o: prepare_source_time_function.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/prepare_source_time_function.o prepare_source_time_function.f90
+$O/prepare_source_time_function.o: ${S}/prepare_source_time_function.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/prepare_source_time_function.o ${S}/prepare_source_time_function.f90
-$O/is_in_convex_quadrilateral.o: is_in_convex_quadrilateral.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/is_in_convex_quadrilateral.o is_in_convex_quadrilateral.f90
+$O/is_in_convex_quadrilateral.o: ${S}/is_in_convex_quadrilateral.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/is_in_convex_quadrilateral.o ${S}/is_in_convex_quadrilateral.f90
-$O/get_perm_cuthill_mckee.o: get_perm_cuthill_mckee.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/get_perm_cuthill_mckee.o get_perm_cuthill_mckee.f90
+$O/get_perm_cuthill_mckee.o: ${S}/get_perm_cuthill_mckee.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/get_perm_cuthill_mckee.o ${S}/get_perm_cuthill_mckee.f90
-$O/read_external_model.o: read_external_model.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/read_external_model.o read_external_model.f90
+$O/read_external_model.o: ${S}/read_external_model.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/read_external_model.o ${S}/read_external_model.f90
-$O/setup_sources_receivers.o: setup_sources_receivers.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/setup_sources_receivers.o setup_sources_receivers.f90
+$O/setup_sources_receivers.o: ${S}/setup_sources_receivers.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/setup_sources_receivers.o ${S}/setup_sources_receivers.f90
-$O/invert_mass_matrix.o: invert_mass_matrix.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/invert_mass_matrix.o invert_mass_matrix.f90
+$O/invert_mass_matrix.o: ${S}/invert_mass_matrix.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/invert_mass_matrix.o ${S}/invert_mass_matrix.f90
-$O/initialize_simulation.o: initialize_simulation.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/initialize_simulation.o initialize_simulation.F90
+$O/initialize_simulation.o: ${S}/initialize_simulation.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/initialize_simulation.o ${S}/initialize_simulation.F90
-$O/set_sources.o: set_sources.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/set_sources.o set_sources.f90
+$O/set_sources.o: ${S}/set_sources.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/set_sources.o ${S}/set_sources.f90
-$O/save_openDX_jacobian.o: save_openDX_jacobian.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/save_openDX_jacobian.o save_openDX_jacobian.f90
+$O/save_openDX_jacobian.o: ${S}/save_openDX_jacobian.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/save_openDX_jacobian.o ${S}/save_openDX_jacobian.f90
-$O/compute_normal_vector.o: compute_normal_vector.f90 constants.h
- ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_normal_vector.o compute_normal_vector.f90
+$O/compute_normal_vector.o: ${S}/compute_normal_vector.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_NO_CHECK) -c -o $O/compute_normal_vector.o ${S}/compute_normal_vector.f90
-$O/read_databases.o: read_databases.f90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/read_databases.o read_databases.f90
+$O/read_databases.o: ${S}/read_databases.f90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/read_databases.o ${S}/read_databases.f90
-$O/prepare_assemble_MPI.o: prepare_assemble_MPI.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/prepare_assemble_MPI.o prepare_assemble_MPI.F90
+$O/prepare_assemble_MPI.o: ${S}/prepare_assemble_MPI.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/prepare_assemble_MPI.o ${S}/prepare_assemble_MPI.F90
-$O/get_MPI.o: get_MPI.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/get_MPI.o get_MPI.F90
+$O/get_MPI.o: ${S}/get_MPI.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/get_MPI.o ${S}/get_MPI.F90
-$O/sort_array_coordinates.o: sort_array_coordinates.F90 constants.h
- ${F90} $(FLAGS_CHECK) -c -o $O/sort_array_coordinates.o sort_array_coordinates.F90
+$O/sort_array_coordinates.o: ${S}/sort_array_coordinates.F90 ${SETUP}/constants.h
+ ${F90} $(FLAGS_CHECK) -c -o $O/sort_array_coordinates.o ${S}/sort_array_coordinates.F90
Modified: seismo/2D/SPECFEM2D/trunk/configure
===================================================================
--- seismo/2D/SPECFEM2D/trunk/configure 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/configure 2011-02-28 22:43:18 UTC (rev 17989)
@@ -1943,7 +1943,7 @@
-ac_config_headers="$ac_config_headers config.h"
+ac_config_headers="$ac_config_headers setup/config.h"
@@ -5541,7 +5541,7 @@
# Checks for library functions.
-ac_config_files="$ac_config_files Makefile DATA/Par_file DATA/SOURCE constants.h precision_mpi.h scotch_5.1.11/src/Makefile.inc"
+ac_config_files="$ac_config_files Makefile DATA/Par_file DATA/SOURCE setup/constants.h setup/precision_mpi.h scotch_5.1.11/src/Makefile.inc"
cat >confcache <<\_ACEOF
# This file is a shell script that caches the results of configure
@@ -6240,12 +6240,12 @@
for ac_config_target in $ac_config_targets
do
case $ac_config_target in
- "config.h") CONFIG_HEADERS="$CONFIG_HEADERS config.h" ;;
+ "setup/config.h") CONFIG_HEADERS="$CONFIG_HEADERS setup/config.h" ;;
"Makefile") CONFIG_FILES="$CONFIG_FILES Makefile" ;;
"DATA/Par_file") CONFIG_FILES="$CONFIG_FILES DATA/Par_file" ;;
"DATA/SOURCE") CONFIG_FILES="$CONFIG_FILES DATA/SOURCE" ;;
- "constants.h") CONFIG_FILES="$CONFIG_FILES constants.h" ;;
- "precision_mpi.h") CONFIG_FILES="$CONFIG_FILES precision_mpi.h" ;;
+ "setup/constants.h") CONFIG_FILES="$CONFIG_FILES setup/constants.h" ;;
+ "setup/precision_mpi.h") CONFIG_FILES="$CONFIG_FILES setup/precision_mpi.h" ;;
"scotch_5.1.11/src/Makefile.inc") CONFIG_FILES="$CONFIG_FILES scotch_5.1.11/src/Makefile.inc" ;;
*) as_fn_error $? "invalid argument: \`$ac_config_target'" "$LINENO" 5 ;;
Modified: seismo/2D/SPECFEM2D/trunk/convolve_source_timefunction.csh
===================================================================
--- seismo/2D/SPECFEM2D/trunk/convolve_source_timefunction.csh 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/convolve_source_timefunction.csh 2011-02-28 22:43:18 UTC (rev 17989)
@@ -17,7 +17,7 @@
echo convolving $file with half_duration_triangle = $half_duration_triangle using lines $nlines
-./xconvolve_source_timefunction < $file > ${file}.convolved
+./bin/xconvolve_source_timefunction < $file > ${file}.convolved
rm input_convolve_code.txt
Modified: seismo/2D/SPECFEM2D/trunk/doc/USER_MANUAL/manual_SPECFEM2D.pdf
===================================================================
--- seismo/2D/SPECFEM2D/trunk/doc/USER_MANUAL/manual_SPECFEM2D.pdf 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/doc/USER_MANUAL/manual_SPECFEM2D.pdf 2011-02-28 22:43:18 UTC (rev 17989)
@@ -4991,8 +4991,9 @@
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trailer
<< /Size 670
/Root 668 0 R
/Info 669 0 R
-/ID [<0CCA2D3704ECF337E3C8FB98937C31C3> <0CCA2D3704ECF337E3C8FB98937C31C3>] >>
+/ID [<6BFAAD905DAA381A3187CC993C01344B> <6BFAAD905DAA381A3187CC993C01344B>] >>
startxref
-1419174
+1419210
%%EOF
Modified: seismo/2D/SPECFEM2D/trunk/doc/USER_MANUAL/manual_SPECFEM2D.tex
===================================================================
--- seismo/2D/SPECFEM2D/trunk/doc/USER_MANUAL/manual_SPECFEM2D.tex 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/doc/USER_MANUAL/manual_SPECFEM2D.tex 2011-02-28 22:43:18 UTC (rev 17989)
@@ -286,7 +286,7 @@
\begin{lyxcode}
make
\end{lyxcode}
-to create all executables.
+to create all executables which will be placed into the folder \texttt{./bin/}.
@@ -340,7 +340,7 @@
\end{itemize}
Then type
\begin{lyxcode}
-./xmeshfem2D
+./bin/xmeshfem2D
\end{lyxcode}
to create the mesh (which will be stored in directory \texttt{OUTPUT\_FILES/}). \texttt{xmeshfem2D} is serial; it will output several files called \texttt{Database??????}, one for each process.
@@ -361,7 +361,7 @@
To examine the quality of the elements in your externally build mesh, type
\begin{lyxcode}
-./xcheck\_quality\_external\_mesh
+./bin/xcheck\_quality\_external\_mesh
\end{lyxcode}
(and answer "3" to the first question asked).
This code will tell you which element in the whole mesh has the worst quality (maximum skewness, i.e. maximum deformation of the element angles) and it should be enough to modify this element with the external software package used for the meshing, and
@@ -384,7 +384,7 @@
To run the solver, type:
\begin{lyxcode}
-./xspecfem2D
+./bin/xspecfem2D
\end{lyxcode}
to run the main solver (use \texttt{mpirun} or equivalent if you compiled with parallel support). This will output the seismograms and snapshots of the wave fronts at different time steps in directory \texttt{OUTPUT\_FILES/}. To visualize them, type "\texttt{gs OUTPUT\_FILES/vect*.ps}" to see the Postscript files (in which the wave field is represented with small arrows, fluid/solid matching interfaces with a thick pink line, and absorbing edges with a thick green line) and "\texttt{gimp OUTPUT\_FILES/image*.gif}" to see the color snapshot showing a pixelized image of one of the two components of the wave field (or pressure, depending on what you have selected for the output in \texttt{DATA/Par\_file}).
Modified: seismo/2D/SPECFEM2D/trunk/src/get_MPI.F90
===================================================================
--- seismo/2D/SPECFEM2D/trunk/src/get_MPI.F90 2011-02-28 21:55:11 UTC (rev 17988)
+++ seismo/2D/SPECFEM2D/trunk/src/get_MPI.F90 2011-02-28 22:43:18 UTC (rev 17989)
@@ -228,13 +228,15 @@
deallocate(nibool_interfaces_true)
! outputs total number of MPI interface points
- call MPI_ALLREDUCE(num_points2, num_points1, 1, MPI_INTEGER, &
- MPI_SUM, MPI_COMM_WORLD, ier)
+ call MPI_REDUCE(num_points2, num_points1, 1, MPI_INTEGER, &
+ MPI_SUM, 0, MPI_COMM_WORLD, ier)
if( myrank == 0 .and. ipass == 1 ) then
write(IOUT,*) 'total MPI interface points: ',num_points1
endif
! checks interfaces in acoustic domains
+ inum = 0
+ count = 0
if ( ninterface_acoustic > 0) then
! checks with assembly of test fields
@@ -262,19 +264,24 @@
allocate(tab_requests_send_recv_acoustic(ninterface_acoustic*2))
allocate(buffer_send_faces_vector_ac(max_nibool_interfaces,ninterface_acoustic))
allocate(buffer_recv_faces_vector_ac(max_nibool_interfaces,ninterface_acoustic))
-
inum = 0
do iinterface = 1, ninterface
inum = inum + nibool_interfaces_acoustic(iinterface)
enddo
+ endif
+
+ ! note: this mpi reduction awaits information from all processes.
+ ! thus, avoid an mpi deadlock in case some of the paritions have no acoustic interface
+ call MPI_REDUCE(inum, num_points1, 1, MPI_INTEGER, &
+ MPI_SUM, 0, MPI_COMM_WORLD, ier)
- call MPI_ALLREDUCE(inum, num_points2, 1, MPI_INTEGER, &
- MPI_SUM, MPI_COMM_WORLD, ier)
-
- if( myrank == 0 .and. ipass == 1 ) then
- write(IOUT,*) ' acoustic interface points: ',num_points2
- endif
+ if( myrank == 0 .and. ipass == 1 ) then
+ write(IOUT,*) ' acoustic interface points: ',num_points1
+ endif
+ ! checks if assembly works
+ inum = 0
+ if( ninterface_acoustic > 0 ) then
! adds contributions from different partitions to flag arrays
! custom_real arrays
call assemble_MPI_vector_ac(test_flag_cr,npoin, &
@@ -285,34 +292,34 @@
buffer_recv_faces_vector_ac, my_neighbours)
! checks number of interface points
- i = 0
+ inum = 0
do iglob=1,npoin
! only counts flags with MPI contributions
- if( test_flag_cr(iglob) > myrank+1.0_CUSTOM_REAL ) i = i + 1
+ if( nint(test_flag_cr(iglob)) > myrank+1 ) inum = inum + 1
enddo
- call MPI_ALLREDUCE(inum, iglob, 1, MPI_INTEGER, &
- MPI_SUM, MPI_COMM_WORLD, ier)
-
- if( myrank == 0 .and. ipass == 1 ) then
- write(IOUT,*) ' assembled acoustic MPI interface points:',iglob
- endif
- if( num_points2 /= iglob ) then
- print*,'error assembly:',myrank
- print*,' count = ',count
- print*,' inum = ',inum
- print*,' i = ',i
- print*,' total: ',num_points2,' not equal to assembled ',iglob
- call exit_MPI('error acoustic MPI assembly')
- endif
+
deallocate(tab_requests_send_recv_acoustic)
deallocate(buffer_send_faces_vector_ac)
deallocate(buffer_recv_faces_vector_ac)
-
- deallocate(test_flag_cr)
-
+ deallocate(test_flag_cr)
endif
+ ! note: this mpi reduction awaits information from all processes.
+ call MPI_REDUCE(inum, num_points2, 1, MPI_INTEGER, &
+ MPI_SUM, 0, MPI_COMM_WORLD, ier)
+ if( myrank == 0 ) then
+ if( ipass == 1 ) then
+ write(IOUT,*) ' assembly acoustic MPI interface points:',num_points2
+ endif
+
+ ! they don't need to fit, somehow..
+ !if( num_points2 /= num_points1 ) then
+ ! print*,'error acoustic assembly:' !,myrank
+ ! print*,' total = ',num_points1,' not equal to assembled ',num_points2
+ ! call exit_MPI('error acoustic MPI assembly')
+ !endif
+ endif
end subroutine get_MPI
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