[cig-commits] r18783 - mc/1D/hc/trunk
becker at geodynamics.org
becker at geodynamics.org
Tue Jul 19 12:01:19 PDT 2011
Author: becker
Date: 2011-07-19 12:01:18 -0700 (Tue, 19 Jul 2011)
New Revision: 18783
Added:
mc/1D/hc/trunk/convert_bernhard_dens.c
mc/1D/hc/trunk/hc_world.png
mc/1D/hc/trunk/hc_world.pvsm
mc/1D/hc/trunk/sh_spherepack.h
mc/1D/hc/trunk/spherepack_sh.c
Modified:
mc/1D/hc/trunk/README.TXT
Log:
Updated readme.
Modified: mc/1D/hc/trunk/README.TXT
===================================================================
--- mc/1D/hc/trunk/README.TXT 2011-07-19 18:34:06 UTC (rev 18782)
+++ mc/1D/hc/trunk/README.TXT 2011-07-19 19:01:18 UTC (rev 18783)
@@ -1,3 +1,30 @@
+README FOR HC
+
+Version 1.0.1
+
+Thorsten Becker - twb at usc.edu
+
+
+
+
+HC is a global mantle circulation solver following Hager & O'Connell
+(1981) which can compute velocities, tractions, and geoid for simple
+density distributions and plate velocities.
+
+This particular implementation illustrates one possible way to combine
+the HC solver routines.
+
+Based on code by Brad Hager, Richard O'Connell, and Bernhard
+Steinberger, this version is by Thorsten Becker and Craig O'Neill.
+
+Note also that the Solid Earth Teaching and Research Environment
+(SEATREE)
+
+ http://geosys.usc.edu/projects/seatree/
+
+provides a convenient user interface for HC.
+
+
INSTALLATION
The code should compile on any basic UNIX/Linux system with the GMT
@@ -4,18 +31,18 @@
tools (by default, version > 4.2.1) and libraries installed. See the
Makefile for comments and what to modify.
-
What is described below is the hc Hager & O'Connell (1981) forward
flow and geoid computation. For plate velocity inversions following
the Ricard & Vigny (1989) method, see the hcplates subdirectory and
-the README there.
+the README there. The plate inversion code, due to Craig O'Neill isn't
+quite working yet.
The Makefile assumes that the following environment variables are
predefined:
1) GMTHOME: needs to point to the base directory of the GMT installation,
e.g.
- /usr/local/src/GMTdev/GMT3.4.5/
+ /usr/local/src/GMTdev/GMT4.5.6/
if you installed GMT yourself, or
@@ -65,15 +92,17 @@
HC CODE usage
-Described in the help page that is displayed for "hc -h" as below.
-Also see http://geosys.usc.edu/projects/seatree/ for a graphical user
-interface, and example plotting scripts as provided below.
+Described in the help page that is displayed for "hc -h" as below.
+Also see SEATREE (http://geosys.usc.edu/projects/seatree/) for a
+graphical user interface, and example plotting scripts as provided
+below.
Example input data is provided in subdirectory example_data/
>>>
-bin/hc - perform Hager & O'Connell flow computation
+becker at walter:~/progs/src/hc-svn > hc -help
+hc - perform Hager & O'Connell flow computation
This code can compute velocities, tractions, and geoid for simple density distributions
and plate velocities using the semi-analytical approach of Hager & O'Connell (1981).
@@ -115,6 +144,10 @@
-ns perform no slip computation (OFF)
-pvel name set prescribed surface velocities from file name (OFF)
The file (e.g. pvel.sh.dat) is based on a DT expansion of cm/yr velocity fields.
+-vshs use the short format (only lmax in header) for the plate velocities (OFF)
+-vdir velocities are given in files name/vel.1.ab to vel.140.ab for different times,
+ -140 to -1 Ma before present, where name is from -pvel
+-vtime time use this particular time step of the plate velocities (-1)
solution procedure and I/O options:
-ng do not compute and print the geoid (1)
@@ -244,8 +277,19 @@
Also see the script calc_vel_and_plot for some suggestions on
how to convert the output.
+ d) convert velocity output and density anomalies into a binary VTK file
+ for paraview
+ hc_extract_spatial vel.sol.bin -2 6 dscaled.sol.bin > vel.vtk
+
+ Load a view into paraview (pvsm file is included here)
+
+ paraview --state=hc_world.pvsm
+
+ to get the view in hc_world.png.
+
+
USING THE SPHERICAL HARMONICS TOOLS AS STANDALONE
Added: mc/1D/hc/trunk/convert_bernhard_dens.c
===================================================================
--- mc/1D/hc/trunk/convert_bernhard_dens.c (rev 0)
+++ mc/1D/hc/trunk/convert_bernhard_dens.c 2011-07-19 19:01:18 UTC (rev 18783)
@@ -0,0 +1,50 @@
+#include "hc.h"
+/*
+
+convert Bernhard's density files
+
+*/
+int main(int argc, char **argv)
+{
+ int i,j,k,lmax,nlat,nlon,nr;
+ SH_RICK_PREC *z,*w,r,dx,lon,dr,val;
+ FILE *in;
+ if(argc != 3){
+ fprintf(stderr,"%s den-file lmax\n",argv[0]);
+ exit(-1);
+ }
+ sscanf(argv[2],"%i",&lmax);
+ nlat = lmax+1;nlon = nlat * 2;
+ z = (SH_RICK_PREC *)malloc(sizeof(SH_RICK_PREC)*nlat);
+ w = (SH_RICK_PREC *)malloc(sizeof(SH_RICK_PREC)*nlat);
+ rick_gauleg(1.0,-1.0,z,w,nlat);
+ for(i=0;i < nlat;i++) /* convert theta colat to lat[deg] */
+ z[i] = THETA2LAT(acos(z[i]));
+ fprintf(stderr,"%s: reading from %s, assuming lmax %i and %i points in latitude\n",
+ argv[0],argv[1],lmax,nlat);
+
+ if((in = fopen(argv[1],"r"))==NULL){
+ fprintf(stderr,"%s: error, cannot open %s\n",argv[0],argv[1]);
+ exit(-1);
+ }
+ fscanf(in,SH_RICK_FLT_FMT,&dx);
+ fscanf(in,"%i",&nr);
+ i = 0;r = 0.55;dr = (0.99-0.55)/(SH_RICK_PREC)(nr-1);
+ j = 0; /* latitude */
+ k = 0;lon = 0.; /* longitude */
+ while(fscanf(in,SH_RICK_FLT_FMT,&val)==1){
+ fprintf(stdout,"%11g %11g %11g %11g\n",lon,z[j],HC_Z_DEPTH(r),val);
+ k++;lon+=dx;
+ if(k == nlon){
+ k=0;lon=0;j++;
+ }
+ if(j == nlat){
+ j=0;i++;r+=dr;
+ }
+ }
+ fprintf(stderr,"done: r: %i/%i\n",i,nr);
+ fclose(in);
+ free(z);free(w);
+ return 0;
+}
+
Added: mc/1D/hc/trunk/hc_world.png
===================================================================
(Binary files differ)
Property changes on: mc/1D/hc/trunk/hc_world.png
___________________________________________________________________
Name: svn:mime-type
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Added: mc/1D/hc/trunk/hc_world.pvsm
===================================================================
--- mc/1D/hc/trunk/hc_world.pvsm (rev 0)
+++ mc/1D/hc/trunk/hc_world.pvsm 2011-07-19 19:01:18 UTC (rev 18783)
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+ <ProxyCollection name="pq_helper_proxies.494">
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+ <ProxyCollection name="timekeeper">
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+ <ProxyCollection name="views">
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+ <CustomProxyDefinitions/>
+ <Links/>
+ <GlobalPropertiesManagers>
+ <GlobalPropertiesManager group="misc" type="GlobalProperties" name="ParaViewProperties">
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+ <Link global_name="ForegroundColor" proxy="319" property="CubeAxesColor"/>
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+ <Link global_name="ForegroundColor" proxy="845" property="AmbientColor"/>
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+ <Link global_name="SelectionColor" proxy="658" property="SelectionColor"/>
+ <Link global_name="SelectionColor" proxy="845" property="SelectionColor"/>
+ <Link global_name="SelectionColor" proxy="918" property="SelectionColor"/>
+ <Link global_name="SurfaceColor" proxy="203" property="DiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="203" property="BackfaceDiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="267" property="DiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="267" property="BackfaceDiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="319" property="BackfaceDiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="590" property="DiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="590" property="BackfaceDiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="658" property="DiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="658" property="BackfaceDiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="845" property="DiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="845" property="BackfaceDiffuseColor"/>
+ <Link global_name="SurfaceColor" proxy="918" property="BackfaceDiffuseColor"/>
+ <Link global_name="TextAnnotationColor" proxy="371" property="TitleColor"/>
+ <Link global_name="TextAnnotationColor" proxy="371" property="LabelColor"/>
+ </GlobalPropertiesManager>
+ </GlobalPropertiesManagers>
+ </ServerManagerState>
+ <ViewManager version="3.10.1">
+ <MultiView>
+ <Splitter index="0" orientation="Horizontal" count="1" sizes="895"/>
+ </MultiView>
+ <Frame index="0" view_module="383"/>
+ </ViewManager>
+</ParaView>
Added: mc/1D/hc/trunk/sh_spherepack.h
===================================================================
--- mc/1D/hc/trunk/sh_spherepack.h (rev 0)
+++ mc/1D/hc/trunk/sh_spherepack.h 2011-07-19 19:01:18 UTC (rev 18783)
@@ -0,0 +1,6 @@
+/*
+
+header files for spherepack routines
+
+*/
+#define SH_SPHPK_PREC float
Added: mc/1D/hc/trunk/spherepack_sh.c
===================================================================
--- mc/1D/hc/trunk/spherepack_sh.c (rev 0)
+++ mc/1D/hc/trunk/spherepack_sh.c 2011-07-19 19:01:18 UTC (rev 18783)
@@ -0,0 +1 @@
+#include "hc.h"
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