[cig-commits] r18570 - short/3D/PyLith/trunk/doc/userguide
brad at geodynamics.org
brad at geodynamics.org
Thu Jun 9 12:40:22 PDT 2011
Author: brad
Date: 2011-06-09 12:40:21 -0700 (Thu, 09 Jun 2011)
New Revision: 18570
Modified:
short/3D/PyLith/trunk/doc/userguide/license.lyx
short/3D/PyLith/trunk/doc/userguide/preface.lyx
short/3D/PyLith/trunk/doc/userguide/userguide.lyx
Log:
Updated bibliography order and labels. Replace Caltech with Davis.
Modified: short/3D/PyLith/trunk/doc/userguide/license.lyx
===================================================================
--- short/3D/PyLith/trunk/doc/userguide/license.lyx 2011-06-09 19:05:01 UTC (rev 18569)
+++ short/3D/PyLith/trunk/doc/userguide/license.lyx 2011-06-09 19:40:21 UTC (rev 18570)
@@ -1,5 +1,5 @@
-#LyX 1.6.5 created this file. For more info see http://www.lyx.org/
-\lyxformat 345
+#LyX 2.0 created this file. For more info see http://www.lyx.org/
+\lyxformat 413
\begin_document
\begin_header
\textclass book
@@ -7,18 +7,26 @@
\end_preamble
\use_default_options false
+\maintain_unincluded_children false
\language english
+\language_package default
\inputencoding latin1
+\fontencoding global
\font_roman default
\font_sans default
\font_typewriter default
\font_default_family default
+\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100
\font_tt_scale 100
\graphics default
+\default_output_format default
+\output_sync 0
+\bibtex_command default
+\index_command default
\paperfontsize default
\spacing single
\use_hyperref false
@@ -26,9 +34,18 @@
\use_geometry true
\use_amsmath 1
\use_esint 0
+\use_mhchem 1
+\use_mathdots 1
\cite_engine basic
\use_bibtopic false
+\use_indices false
\paperorientation portrait
+\suppress_date false
+\use_refstyle 0
+\index Index
+\shortcut idx
+\color #008000
+\end_index
\leftmargin 1in
\topmargin 1in
\rightmargin 1in
@@ -36,15 +53,16 @@
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
-\defskip medskip
+\paragraph_indentation default
\quotes_language english
\papercolumns 1
\papersides 2
\paperpagestyle default
\tracking_changes false
\output_changes false
-\author ""
-\author ""
+\html_math_output 0
+\html_css_as_file 0
+\html_be_strict false
\end_header
\begin_body
@@ -54,7 +72,7 @@
\end_layout
\begin_layout Standard
-Copyright (C) 2010 University of California, Davis
+Copyright (C) 2010-2011 University of California, Davis
\end_layout
\begin_layout Standard
Modified: short/3D/PyLith/trunk/doc/userguide/preface.lyx
===================================================================
--- short/3D/PyLith/trunk/doc/userguide/preface.lyx 2011-06-09 19:05:01 UTC (rev 18569)
+++ short/3D/PyLith/trunk/doc/userguide/preface.lyx 2011-06-09 19:40:21 UTC (rev 18570)
@@ -1,5 +1,5 @@
-#LyX 1.6.4 created this file. For more info see http://www.lyx.org/
-\lyxformat 345
+#LyX 2.0 created this file. For more info see http://www.lyx.org/
+\lyxformat 413
\begin_document
\begin_header
\textclass book
@@ -7,18 +7,26 @@
\end_preamble
\use_default_options false
+\maintain_unincluded_children false
\language english
+\language_package default
\inputencoding latin1
+\fontencoding global
\font_roman default
\font_sans default
\font_typewriter default
\font_default_family default
+\use_non_tex_fonts false
\font_sc false
\font_osf false
\font_sf_scale 100
\font_tt_scale 100
\graphics default
+\default_output_format default
+\output_sync 0
+\bibtex_command default
+\index_command default
\paperfontsize default
\spacing single
\use_hyperref false
@@ -26,9 +34,18 @@
\use_geometry true
\use_amsmath 1
\use_esint 0
+\use_mhchem 1
+\use_mathdots 1
\cite_engine basic
\use_bibtopic false
+\use_indices false
\paperorientation portrait
+\suppress_date false
+\use_refstyle 0
+\index Index
+\shortcut idx
+\color #008000
+\end_index
\leftmargin 1in
\topmargin 1in
\rightmargin 1in
@@ -36,15 +53,16 @@
\secnumdepth 3
\tocdepth 3
\paragraph_separation indent
-\defskip medskip
+\paragraph_indentation default
\quotes_language english
\papercolumns 1
\papersides 2
\paperpagestyle default
\tracking_changes false
\output_changes false
-\author ""
-\author ""
+\html_math_output 0
+\html_css_as_file 0
+\html_be_strict false
\end_header
\begin_body
@@ -170,16 +188,16 @@
Knepley, S.
Somala, L.
Strand, and C.
- Williams (2009),
+ Williams (2011),
\emph on
-PyLith User Manual, Version 1.5.0.
+PyLith User Manual, Version 1.6.0.
\emph default
- Pasadena, CA: Computational Infrastructure of Geodynamics.
+ Davis, CA: Computational Infrastructure of Geodynamics.
\begin_inset Newline newline
\end_inset
-URL: geodynamics.org/cig/software/short/pylith/pylith_manual-1.5.pdf
+URL: geodynamics.org/cig/software/pylith/pylith_manual-1.6.pdf
\end_layout
\begin_layout Section
Modified: short/3D/PyLith/trunk/doc/userguide/userguide.lyx
===================================================================
--- short/3D/PyLith/trunk/doc/userguide/userguide.lyx 2011-06-09 19:05:01 UTC (rev 18569)
+++ short/3D/PyLith/trunk/doc/userguide/userguide.lyx 2011-06-09 19:40:21 UTC (rev 18570)
@@ -132,7 +132,7 @@
\end_layout
\begin_layout Author
-© California Institute of Technology
+© University of California, Davis
\begin_inset Newline newline
\end_inset
@@ -358,54 +358,7 @@
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "1"
-key "Williams:etal:2005"
-
-\end_inset
-
-Williams, C.A., B.
- Aagaard, and M.G.
- Knepley (2005), Development of software for studying earthquakes across
- multiple spatial and temporal scales by coupling quasi-static and dynamic
- simulations,
-\emph on
-Eos Trans.
- AGU, 86
-\emph default
-(52), Fall Meet.
- Suppl., Abstract S53A-1072.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "2"
-key "Williams:2006"
-
-\end_inset
-
-Williams, C.A.
- (2006), Development of a package for modeling stress in the lithosphere,
-
-\emph on
-Eos Trans.
- AGU,
-\emph default
-
-\emph on
-87
-\emph default
-(36), Jt.
- Assem.
- Suppl., Abstract T24A-01 Invited.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "3"
+label "Aagaard et al., 2001a"
key "Aagaard:etal:2001a"
\end_inset
@@ -424,7 +377,7 @@
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "4"
+label "Aagaard et al., 2001b"
key "Aagaard:etal:2001b"
\end_inset
@@ -444,7 +397,7 @@
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "5"
+label "Aagaard et al., 2007"
key "Aagaard:etal:2007"
\end_inset
@@ -465,7 +418,7 @@
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "6"
+label "Aagaard et al., 2008"
key "Aagaard:etal:2008"
\end_inset
@@ -490,68 +443,59 @@
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "7"
-key "Brune:1970"
+label "Bathe, 1995"
+key "Bathe:1995"
\end_inset
-Brune, J.N.
- (1970), Tectonic stress and spectra of seismic shear waves from earthquakes,
-
-\emph on
-Journal of Geophysical Research, 75
-\emph default
-, 4997-5009.
+Bathe, K.-J.
+ (1995),
+\shape italic
+Finite-Element Procedures
+\shape default
+, Prentice Hall, Upper Saddle River, New Jersey, 1037 pp.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "8"
-key "Kojic:Bathe:1987"
+label "Ben-Zion and Rice, 1997"
+key "BenZion:Rice:1997"
\end_inset
-Kojic, M.
- and K.-J.
- Bathe (1987), The `Effective Stress-Function' Algorithm for Thermo-Elasto-Plast
-icity and Creep,
-\emph on
-Int.
- J.
- Num.
- Meth.
- Eng
-\emph default
-.
-\emph on
-, 24
-\emph default
-, 1509-1532.
+Ben-Zion, Y.
+ and J.R.
+ Rice (1997), Dynamic simulations of slip on a smooth fault in an elastic
+ solid, J.
+ Geophys.
+ Res., 102, 17,771–17,784.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-key "Knopoff:Ni:2001"
+label "Brune, 1970"
+key "Brune:1970"
\end_inset
-Knopoff, L.
- and X.X.
- Ni (2001), Numerical instability at the edge of a dynamic fracture,
+Brune, J.N.
+ (1970), Tectonic stress and spectra of seismic shear waves from earthquakes,
+
\emph on
-Geophysical Journal International,
+Journal of Geophysical Research, 75
\emph default
-147(3), 1-6, doi: 10.1046/j.1365-246x.2001.01567.x.
+, 4997-5009.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
+label "Day and Ely, 2002"
key "Day:Ely:2002"
\end_inset
@@ -573,131 +517,185 @@
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "10"
-key "Zienkiewicz:Taylor:2000"
+label "Drucker and Prager, 1952"
+key "Drucker:Prager:1952"
\end_inset
-Zienkiewicz, O.C.
- and R.L.
- Taylor (2000),
+Drucker, D.
+ C.
+ and Prager, W.
+ (1952).
+ Soil mechanics and plastic analysis for limit design,
\shape italic
-The Finite Element Method, Fifth Edition, Volume 2: Solid Mechanics
+Quarterly of Applied Mathematics
\shape default
-, Butterworth-Heinemann, Oxford, 459 pp.
+,
+\shape italic
+10
+\shape default
+, 157–165.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "11"
-key "Taylor:2003"
+label "Liu et al., 2006"
+key "Liu:etal:2006"
\end_inset
-Taylor, R.L.
- (2003), `FEAP--A Finite Element Analysis Program',
+Liu, P., R.J.
+ Archuleta, S.H.
+ Hartzell (2006), Prediction of broadband ground-motion time histories:
+ Hybrid low/high-frequency method with correlated random source parameters,
+
\shape italic
-Version 7.5 Theory Manual
+Bull.
+ Seismol.
+ Soc.
+ Am.
\shape default
-, 154 pp.
+, 96, 2118-2130.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "11"
-key "Timoshenko:Goodier:1987"
+label "Kaneko et al., 2008"
+key "Kaneko:etal:2008"
\end_inset
-Timoshenko, S.P.
- and J.N.
- Goodier (1987),
+Kaneko, Y., N.
+ Lapusta, and J.-P.
+ Ampuero (2008), Spectral element modeling of spontaneous earthquake rupture
+ on rate and state faults: Effect of velocity-strengthening friction at
+ shallow depths,
\shape italic
-Theory of Elasticity, Third Edition
+Journal of Geophysical Research
\shape default
-, McGraw-Hill, New York, 567 pp.
+, 113, B09317, doi:10.1029/2007JB005553.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "12"
-key "Okada:1992"
+label "Kirby and Kronenberg, 1987"
+key "Kirby:Kronenberg:1987"
\end_inset
-Okada, Y., Internal deformation due to shear and tensile faults in a half-space
- (1992),
+Kirby, S.
+ H.
+ and A.
+ K.
+ Kronenberg (1987), Rheology of the lithosphere: Selected topics,
\shape italic
-Bull.
- Seismol.
- Soc.
- Am.
+Reviews of Geophysics, 25
\shape default
-,
-\shape italic
-83
-\shape default
-, 1018-1040.
+, 1219-1244.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "13"
-key "Savage:Prescott:1978"
+label "Knopoff and Ni, 2001"
+key "Knopoff:Ni:2001"
\end_inset
-Savage, J.
- C.
- and W.
- H.
- Prescott (1978), Asthenosphere readjustment and the earthquake cycle,
+Knopoff, L.
+ and X.X.
+ Ni (2001), Numerical instability at the edge of a dynamic fracture,
+\emph on
+Geophysical Journal International,
+\emph default
+147(3), 1-6, doi: 10.1046/j.1365-246x.2001.01567.x.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Kojic and Bathe, 1987"
+key "Kojic:Bathe:1987"
+
+\end_inset
+
+Kojic, M.
+ and K.-J.
+ Bathe (1987), The `Effective Stress-Function' Algorithm for Thermo-Elasto-Plast
+icity and Creep,
+\emph on
+Int.
+ J.
+ Num.
+ Meth.
+ Eng
+\emph default
+.
+\emph on
+, 24
+\emph default
+, 1509-1532.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "McGarr, 1988"
+key "McGarr:1988"
+
+\end_inset
+
+McGarr, A.
+ (1988), On the state of lithospheric stress in the absence of applied tectonic
+ forces,
\shape italic
-Journal of Geophysical
+Journal of Geophysical Research
\shape default
-
+,
\shape italic
-Research
+93
\shape default
-\emph on
-, 83
-\emph default
-, 3369-3376.
+, 13,609-13,617.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "14"
-key "Kirby:Kronenberg:1987"
+label "Okada, 1992"
+key "Okada:1992"
\end_inset
-Kirby, S.
- H.
- and A.
- K.
- Kronenberg (1987), Rheology of the lithosphere: Selected topics,
+Okada, Y., Internal deformation due to shear and tensile faults in a half-space
+ (1992),
\shape italic
-Reviews of Geophysics, 25
+Bull.
+ Seismol.
+ Soc.
+ Am.
\shape default
-, 1219-1244.
+,
+\shape italic
+83
+\shape default
+, 1018-1040.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "15"
+label "Paterson, 1994"
key "Paterson:1994"
\end_inset
@@ -716,7 +714,7 @@
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "16"
+label "Prentice, 1968"
key "Prentice:1968"
\end_inset
@@ -737,123 +735,127 @@
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "17"
-key "Drucker:Prager:1952"
+label "Savage and Prescott, 1978"
+key "Savage:Prescott:1978"
\end_inset
-Drucker, D.
+Savage, J.
C.
- and Prager, W.
- (1952).
- Soil mechanics and plastic analysis for limit design,
+ and W.
+ H.
+ Prescott (1978), Asthenosphere readjustment and the earthquake cycle,
\shape italic
-Quarterly of Applied Mathematics
+Journal of Geophysical
\shape default
-,
+
\shape italic
-10
+Research
\shape default
-, 157–165.
+\emph on
+, 83
+\emph default
+, 3369-3376.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "18"
-key "Bathe:1995"
+label "Taylor, 2003"
+key "Taylor:2003"
\end_inset
-Bathe, K.-J.
- (1995),
+Taylor, R.L.
+ (2003), `FEAP--A Finite Element Analysis Program',
\shape italic
-Finite-Element Procedures
+Version 7.5 Theory Manual
\shape default
-, Prentice Hall, Upper Saddle River, New Jersey, 1037 pp.
+, 154 pp.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "19"
-key "Liu:etal:2006"
+label "Timoshenko and Goodier, 1987"
+key "Timoshenko:Goodier:1987"
\end_inset
-Liu, P., R.J.
- Archuleta, S.H.
- Hartzell (2006), Prediction of broadband ground-motion time histories:
- Hybrid low/high-frequency method with correlated random source parameters,
-
+Timoshenko, S.P.
+ and J.N.
+ Goodier (1987),
\shape italic
-Bull.
- Seismol.
- Soc.
- Am.
+Theory of Elasticity, Third Edition
\shape default
-, 96, 2118-2130.
+, McGraw-Hill, New York, 567 pp.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "20"
-key "BenZion:Rice:1997"
+label "Williams et al., 2005"
+key "Williams:etal:2005"
\end_inset
-Ben-Zion, Y.
- and J.R.
- Rice (1997), Dynamic simulations of slip on a smooth fault in an elastic
- solid, J.
- Geophys.
- Res., 102, 17,771–17,784.
+Williams, C.A., B.
+ Aagaard, and M.G.
+ Knepley (2005), Development of software for studying earthquakes across
+ multiple spatial and temporal scales by coupling quasi-static and dynamic
+ simulations,
+\emph on
+Eos Trans.
+ AGU, 86
+\emph default
+(52), Fall Meet.
+ Suppl., Abstract S53A-1072.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "21"
-key "Kaneko:etal:2008"
+label "Williams, 2006"
+key "Williams:2006"
\end_inset
-Kaneko, Y., N.
- Lapusta, and J.-P.
- Ampuero (2008), Spectral element modeling of spontaneous earthquake rupture
- on rate and state faults: Effect of velocity-strengthening friction at
- shallow depths,
-\shape italic
-Journal of Geophysical Research
-\shape default
-, 113, B09317, doi:10.1029/2007JB005553.
+Williams, C.A.
+ (2006), Development of a package for modeling stress in the lithosphere,
+
+\emph on
+Eos Trans.
+ AGU,
+\emph default
+
+\emph on
+87
+\emph default
+(36), Jt.
+ Assem.
+ Suppl., Abstract T24A-01 Invited.
\end_layout
\begin_layout Bibliography
\labelwidthstring Bibliography
\begin_inset CommandInset bibitem
LatexCommand bibitem
-label "22"
-key "McGarr:1988"
+label "Zienkiewicz and Taylor, 2000"
+key "Zienkiewicz:Taylor:2000"
\end_inset
-McGarr, A.
- (1988), On the state of lithospheric stress in the absence of applied tectonic
- forces,
+Zienkiewicz, O.C.
+ and R.L.
+ Taylor (2000),
\shape italic
-Journal of Geophysical Research
+The Finite Element Method, Fifth Edition, Volume 2: Solid Mechanics
\shape default
-,
-\shape italic
-93
-\shape default
-, 13,609-13,617.
+, Butterworth-Heinemann, Oxford, 459 pp.125
\end_layout
\end_body
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