[cig-commits] r20393 - in seismo/3D/SPECFEM3D/trunk: examples/homogeneous_halfspace utils/Cluster/pbs
carltape at geodynamics.org
carltape at geodynamics.org
Tue Jun 19 16:52:53 PDT 2012
Author: carltape
Date: 2012-06-19 16:52:53 -0700 (Tue, 19 Jun 2012)
New Revision: 20393
Modified:
seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README
seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_decomposer_pbs.bash
seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_generate_databases_pbs.bash
seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_mesher_pbs.bash
seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_solver_pbs.bash
Log:
copy run script as a backup file
Modified: seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README
===================================================================
--- seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README 2012-06-19 22:23:01 UTC (rev 20392)
+++ seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README 2012-06-19 23:52:53 UTC (rev 20393)
@@ -77,7 +77,7 @@
> bsub < go_decomposer_lsf.bash
this creates mesh partitions "proc000***_Database" in directory in_out_files/DATABASES_MPI/.
- the output file in_out_files/*.o contains information on the partitioning
+ the output file in_out_files/OUTPUT_FILES/*.o contains information on the partitioning
note 1: the program xdecompose_mesh_SCOTCH is a serial program (runs on 1 core)
note 2: for small jobs (like this one), you can simply launch the job on
Modified: seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_decomposer_pbs.bash
===================================================================
--- seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_decomposer_pbs.bash 2012-06-19 22:23:01 UTC (rev 20392)
+++ seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_decomposer_pbs.bash 2012-06-19 23:52:53 UTC (rev 20393)
@@ -28,6 +28,9 @@
echo starting decomposer for $numnodes partitions
echo " "
+# save a copy
+cp go_decomposer_pbs.bash in_out_files/OUTPUT_FILES/
+
# USER CHANGE MESH DIRECTORY
MESHDIR=examples/homogeneous_halfspace/MESH/
Modified: seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_generate_databases_pbs.bash
===================================================================
--- seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_generate_databases_pbs.bash 2012-06-19 22:23:01 UTC (rev 20392)
+++ seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_generate_databases_pbs.bash 2012-06-19 23:52:53 UTC (rev 20393)
@@ -28,6 +28,7 @@
mkdir -p in_out_files/OUTPUT_FILES
# backup files used for this simulation
+cp go_generate_databases_pbs.bash in_out_files/OUTPUT_FILES/
cp in_data_files/Par_file in_out_files/OUTPUT_FILES/
# save a complete copy of source files
Modified: seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_mesher_pbs.bash
===================================================================
--- seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_mesher_pbs.bash 2012-06-19 22:23:01 UTC (rev 20392)
+++ seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_mesher_pbs.bash 2012-06-19 23:52:53 UTC (rev 20393)
@@ -25,6 +25,7 @@
mkdir -p in_out_files/DATABASES_MPI
# backup files used for this simulation
+cp go_mesher_pbs.bash in_out_files/OUTPUT_FILES/
cp in_data_files/Par_file in_out_files/OUTPUT_FILES/
cp in_data_files/meshfem3D_files/Mesh_Par_file in_out_files/OUTPUT_FILES/
Modified: seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_solver_pbs.bash
===================================================================
--- seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_solver_pbs.bash 2012-06-19 22:23:01 UTC (rev 20392)
+++ seismo/3D/SPECFEM3D/trunk/utils/Cluster/pbs/go_solver_pbs.bash 2012-06-19 23:52:53 UTC (rev 20393)
@@ -28,6 +28,7 @@
mkdir -p in_out_files/OUTPUT_FILES
# backup files used for this simulation
+cp go_solver_pbs.bash in_out_files/OUTPUT_FILES/
cp in_data_files/Par_file in_out_files/OUTPUT_FILES/
cp in_data_files/STATIONS in_out_files/OUTPUT_FILES/
cp in_data_files/CMTSOLUTION in_out_files/OUTPUT_FILES/
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