[cig-commits] r20395 - short/3D/PyLith/branches/v1.7-stable/doc/userguide
sue at geodynamics.org
sue at geodynamics.org
Wed Jun 20 10:59:20 PDT 2012
Author: sue
Date: 2012-06-20 10:59:19 -0700 (Wed, 20 Jun 2012)
New Revision: 20395
Modified:
short/3D/PyLith/branches/v1.7-stable/doc/userguide/userguide.lyx
Log:
test
Modified: short/3D/PyLith/branches/v1.7-stable/doc/userguide/userguide.lyx
===================================================================
--- short/3D/PyLith/branches/v1.7-stable/doc/userguide/userguide.lyx 2012-06-20 01:15:49 UTC (rev 20394)
+++ short/3D/PyLith/branches/v1.7-stable/doc/userguide/userguide.lyx 2012-06-20 17:59:19 UTC (rev 20395)
@@ -1,886 +1,886 @@
-#LyX 2.0 created this file. For more info see http://www.lyx.org/
-\lyxformat 413
-\begin_document
-\begin_header
-\textclass book
-\begin_preamble
-%\usepackage{hyperref}
-
-%\let\myUrl\url
-%\renewcommand{\url}[1]{(\myUrl{#1})}
-%\newcommand\Prefix[3]{\vphantom{#3}#1#2#3}
-\end_preamble
-\use_default_options false
-\maintain_unincluded_children false
-\language english
-\language_package default
-\inputencoding latin1
-\fontencoding T1
-\font_roman times
-\font_sans helvet
-\font_typewriter courier
-\font_default_family default
-\use_non_tex_fonts false
-\font_sc false
-\font_osf false
-\font_sf_scale 100
-\font_tt_scale 100
-
-\graphics default
-\default_output_format default
-\output_sync 0
-\bibtex_command default
-\index_command default
-\float_placement tbph
-\paperfontsize default
-\spacing single
-\use_hyperref true
-\pdf_bookmarks true
-\pdf_bookmarksnumbered false
-\pdf_bookmarksopen false
-\pdf_bookmarksopenlevel 1
-\pdf_breaklinks true
-\pdf_pdfborder true
-\pdf_colorlinks true
-\pdf_backref false
-\pdf_pdfusetitle true
-\papersize default
-\use_geometry true
-\use_amsmath 1
-\use_esint 0
-\use_mhchem 1
-\use_mathdots 1
-\cite_engine basic
-\use_bibtopic false
-\use_indices false
-\paperorientation portrait
-\suppress_date false
-\use_refstyle 0
-\index Index
-\shortcut idx
-\color #008000
-\end_index
-\leftmargin 1in
-\topmargin 1in
-\rightmargin 1in
-\bottommargin 1in
-\secnumdepth 3
-\tocdepth 3
-\paragraph_separation indent
-\paragraph_indentation default
-\quotes_language english
-\papercolumns 1
-\papersides 2
-\paperpagestyle plain
-\tracking_changes false
-\output_changes false
-\html_math_output 0
-\html_css_as_file 0
-\html_be_strict false
-\end_header
-
-\begin_body
-
-\begin_layout Standard
-\noindent
-\align center
-\begin_inset Float figure
-placement H
-wide false
-sideways false
-status open
-
-\begin_layout Plain Layout
-\noindent
-\align center
-\begin_inset Graphics
- filename cover/cover.pdf
- width 75page%
-
-\end_inset
-
-
-\end_layout
-
-\end_inset
-
-
-\end_layout
-
-\begin_layout Standard
-\begin_inset ERT
-status open
-
-\begin_layout Plain Layout
-
-
-\backslash
-thispagestyle{empty}
-\end_layout
-
-\begin_layout Plain Layout
-
-\end_layout
-
-\end_inset
-
-
-\end_layout
-
-\begin_layout Title
-PyLith User Manual
-\end_layout
-
-\begin_layout Author
-© University of California, Davis
-\begin_inset Newline newline
-\end_inset
-
-Version 1.7.1
-\end_layout
-
-\begin_layout Date
-\noindent
-\begin_inset ERT
-status collapsed
-
-\begin_layout Plain Layout
-
-
-\backslash
-today
-\end_layout
-
-\end_inset
-
-
-\end_layout
-
-\begin_layout Standard
-\begin_inset ERT
-status open
-
-\begin_layout Plain Layout
-
-
-\backslash
-frontmatter
-\end_layout
-
-\end_inset
-
-
-\begin_inset CommandInset toc
-LatexCommand tableofcontents
-
-\end_inset
-
-
-\end_layout
-
-\begin_layout Standard
-\begin_inset FloatList figure
-
-\end_inset
-
-
-\end_layout
-
-\begin_layout Standard
-\begin_inset FloatList table
-
-\end_inset
-
-
-\end_layout
-
-\begin_layout Standard
-\begin_inset CommandInset include
-LatexCommand input
-filename "preface.lyx"
-
-\end_inset
-
-
-\begin_inset ERT
-status collapsed
-
-\begin_layout Plain Layout
-
-
-\backslash
-mainmatter
-\end_layout
-
-\end_inset
-
-
-\begin_inset ERT
-status collapsed
-
-\begin_layout Plain Layout
-
-
-\backslash
-raggedbottom
-\end_layout
-
-\end_inset
-
-
-\end_layout
-
-\begin_layout Standard
-\begin_inset CommandInset include
-LatexCommand input
-filename "intro/intro.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "governingeqns/governingeqns.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "install/install.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "runpylith/runpylith.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "materials/materials.lyx"
-
-\end_inset
-
-
-\end_layout
-
-\begin_layout Standard
-\begin_inset CommandInset include
-LatexCommand input
-filename "boundaryconditions/boundaryconditions.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "tutorials/tutorials.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "benchmarks/benchmarks.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "extending/extending.lyx"
-
-\end_inset
-
-
-\end_layout
-
-\begin_layout Standard
-\start_of_appendix
-\begin_inset ERT
-status collapsed
-
-\begin_layout Plain Layout
-
-%dummy comment inserted by tex2lyx to ensure that this paragraph is not
- empty
-\end_layout
-
-\begin_layout Plain Layout
-
-\end_layout
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "glossary.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "components.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "fileformats/fileformats.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand include
-filename "materials/altformulations.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "analyticalsolns/analyticalsolns.lyx"
-
-\end_inset
-
-
-\begin_inset CommandInset include
-LatexCommand input
-filename "license.lyx"
-
-\end_inset
-
-
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Aagaard et al., 2001a"
-key "Aagaard:etal:2001a"
-
-\end_inset
-
-Aagaard, B.T., J.F.
- Hall, and T.H.
- Heaton (2001), Characterization of near-source ground motions with earthquake
- simulations,
-\emph on
-Earthquake Spectra, 17
-\emph default
-(2), 177-207.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Aagaard et al., 2001b"
-key "Aagaard:etal:2001b"
-
-\end_inset
-
-Aagaard, B.T., T.H.
- Heaton, and J.F.
- Hall (2001), Dynamic earthquake ruptures in the presence of lithostatic
- normal stresses: Implications for friction models and heat production,
-
-\emph on
-Bulletin of the Seismological Society of America, 91
-\emph default
-(6), 1765-1796.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Aagaard et al., 2007"
-key "Aagaard:etal:2007"
-
-\end_inset
-
-Aagaard, B., C.
- Williams, and M.
- Knepley (2007), PyLith: A finite-element code for modeling quasi-static
- and dynamic crustal deformation,
-\emph on
-Eos Trans.
- AGU, 88
-\emph default
-(52), Fall Meet.
- Suppl., Abstract T21B-0592.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Aagaard et al., 2008"
-key "Aagaard:etal:2008"
-
-\end_inset
-
-Aagaard, B., C.
- Williams, and M.
- Knepley (2008), PyLith: A finite-element code for modeling quasi-static
- and dynamic crustal deformation,
-\emph on
-Eos Trans.
- AGU
-\emph default
-,
-\emph on
-89(
-\emph default
-53), Fall Meet.
- Suppl., Abstract T41A-1925.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Bathe, 1995"
-key "Bathe:1995"
-
-\end_inset
-
-Bathe, K.-J.
- (1995),
-\shape italic
-Finite-Element Procedures
-\shape default
-, Prentice Hall, Upper Saddle River, New Jersey, 1037 pp.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Ben-Zion and Rice, 1997"
-key "BenZion:Rice:1997"
-
-\end_inset
-
-Ben-Zion, Y.
- and J.R.
- Rice (1997), Dynamic simulations of slip on a smooth fault in an elastic
- solid, J.
- Geophys.
- Res., 102, 17,771–17,784.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Brune, 1970"
-key "Brune:1970"
-
-\end_inset
-
-Brune, J.N.
- (1970), Tectonic stress and spectra of seismic shear waves from earthquakes,
-
-\emph on
-Journal of Geophysical Research, 75
-\emph default
-, 4997-5009.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Day and Ely, 2002"
-key "Day:Ely:2002"
-
-\end_inset
-
-Day, S.M.
- and G.P.
- Ely (2002), Effct of a shallow weak zone on fault rupture: Numerical simulation
- of scale-model experiments,
-\shape italic
-Bull.
- Seismol.
- Soc.
- Am.
-\shape default
-, 92(8), 3022-3041, doi: 10.1785/0120010273.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Drucker and Prager, 1952"
-key "Drucker:Prager:1952"
-
-\end_inset
-
-Drucker, D.
- C.
- and Prager, W.
- (1952).
- Soil mechanics and plastic analysis for limit design,
-\shape italic
-Quarterly of Applied Mathematics
-\shape default
-,
-\shape italic
-10
-\shape default
-, 157–165.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Liu et al., 2006"
-key "Liu:etal:2006"
-
-\end_inset
-
-Liu, P., R.J.
- Archuleta, S.H.
- Hartzell (2006), Prediction of broadband ground-motion time histories:
- Hybrid low/high-frequency method with correlated random source parameters,
-
-\shape italic
-Bull.
- Seismol.
- Soc.
- Am.
-\shape default
-, 96, 2118-2130.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Kaneko et al., 2008"
-key "Kaneko:etal:2008"
-
-\end_inset
-
-Kaneko, Y., N.
- Lapusta, and J.-P.
- Ampuero (2008), Spectral element modeling of spontaneous earthquake rupture
- on rate and state faults: Effect of velocity-strengthening friction at
- shallow depths,
-\shape italic
-Journal of Geophysical Research
-\shape default
-, 113, B09317, doi:10.1029/2007JB005553.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Kirby and Kronenberg, 1987"
-key "Kirby:Kronenberg:1987"
-
-\end_inset
-
-Kirby, S.
- H.
- and A.
- K.
- Kronenberg (1987), Rheology of the lithosphere: Selected topics,
-\shape italic
-Reviews of Geophysics, 25
-\shape default
-, 1219-1244.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Knopoff and Ni, 2001"
-key "Knopoff:Ni:2001"
-
-\end_inset
-
-Knopoff, L.
- and X.X.
- Ni (2001), Numerical instability at the edge of a dynamic fracture,
-\emph on
-Geophysical Journal International,
-\emph default
-147(3), 1-6, doi: 10.1046/j.1365-246x.2001.01567.x.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Kojic and Bathe, 1987"
-key "Kojic:Bathe:1987"
-
-\end_inset
-
-Kojic, M.
- and K.-J.
- Bathe (1987), The `Effective Stress-Function' Algorithm for Thermo-Elasto-Plast
-icity and Creep,
-\emph on
-Int.
- J.
- Num.
- Meth.
- Eng
-\emph default
-.
-\emph on
-, 24
-\emph default
-, 1509-1532.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "McGarr, 1988"
-key "McGarr:1988"
-
-\end_inset
-
-McGarr, A.
- (1988), On the state of lithospheric stress in the absence of applied tectonic
- forces,
-\shape italic
-Journal of Geophysical Research
-\shape default
-,
-\shape italic
-93
-\shape default
-, 13,609-13,617.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Menke, 1984"
-key "Menke:1984"
-
-\end_inset
-
-Menke, W.
- (1984),
-\shape italic
-Geophysical Data Analysis: Discrete Inverse Theory
-\shape default
-, Academic Press, Inc., Orlando, 260 pp.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Okada, 1992"
-key "Okada:1992"
-
-\end_inset
-
-Okada, Y., Internal deformation due to shear and tensile faults in a half-space
- (1992),
-\shape italic
-Bull.
- Seismol.
- Soc.
- Am.
-\shape default
-,
-\shape italic
-83
-\shape default
-, 1018-1040.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Paterson, 1994"
-key "Paterson:1994"
-
-\end_inset
-
-Paterson, W.
- S.
- B.
- (1994),
-\shape italic
-The Physics of Glaciers, Third Edition
-\shape default
-, Elsevier Science Ltd., Oxford, 480 pp.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Prentice, 1968"
-key "Prentice:1968"
-
-\end_inset
-
-Prentice, J.
- H, (1968), Dimensional problem of the power law in rheology,
-\shape italic
-Nature
-\shape default
-,
-\shape italic
-217
-\shape default
-, 157.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Savage and Prescott, 1978"
-key "Savage:Prescott:1978"
-
-\end_inset
-
-Savage, J.
- C.
- and W.
- H.
- Prescott (1978), Asthenosphere readjustment and the earthquake cycle,
-\shape italic
-Journal of Geophysical
-\shape default
-
-\shape italic
-Research
-\shape default
-\emph on
-, 83
-\emph default
-, 3369-3376.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Taylor, 2003"
-key "Taylor:2003"
-
-\end_inset
-
-Taylor, R.L.
- (2003), `FEAP--A Finite Element Analysis Program',
-\shape italic
-Version 7.5 Theory Manual
-\shape default
-, 154 pp.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Timoshenko and Goodier, 1987"
-key "Timoshenko:Goodier:1987"
-
-\end_inset
-
-Timoshenko, S.P.
- and J.N.
- Goodier (1987),
-\shape italic
-Theory of Elasticity, Third Edition
-\shape default
-, McGraw-Hill, New York, 567 pp.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Williams et al., 2005"
-key "Williams:etal:2005"
-
-\end_inset
-
-Williams, C.A., B.
- Aagaard, and M.G.
- Knepley (2005), Development of software for studying earthquakes across
- multiple spatial and temporal scales by coupling quasi-static and dynamic
- simulations,
-\emph on
-Eos Trans.
- AGU, 86
-\emph default
-(52), Fall Meet.
- Suppl., Abstract S53A-1072.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Williams, 2006"
-key "Williams:2006"
-
-\end_inset
-
-Williams, C.A.
- (2006), Development of a package for modeling stress in the lithosphere,
-
-\emph on
-Eos Trans.
- AGU,
-\emph default
-
-\emph on
-87
-\emph default
-(36), Jt.
- Assem.
- Suppl., Abstract T24A-01 Invited.
-\end_layout
-
-\begin_layout Bibliography
-\labelwidthstring Bibliography
-\begin_inset CommandInset bibitem
-LatexCommand bibitem
-label "Zienkiewicz and Taylor, 2000"
-key "Zienkiewicz:Taylor:2000"
-
-\end_inset
-
-Zienkiewicz, O.C.
- and R.L.
- Taylor (2000),
-\shape italic
-The Finite Element Method, Fifth Edition, Volume 2: Solid Mechanics
-\shape default
-, Butterworth-Heinemann, Oxford, 459 pp.125
-\end_layout
-
-\end_body
-\end_document
+#LyX 2.0 created this file. For more info see http://www.lyx.org/
+\lyxformat 413
+\begin_document
+\begin_header
+\textclass book
+\begin_preamble
+%\usepackage{hyperref}
+
+%\let\myUrl\url
+%\renewcommand{\url}[1]{(\myUrl{#1})}
+%\newcommand\Prefix[3]{\vphantom{#3}#1#2#3}
+\end_preamble
+\use_default_options false
+\maintain_unincluded_children false
+\language english
+\language_package default
+\inputencoding latin1
+\fontencoding T1
+\font_roman times
+\font_sans helvet
+\font_typewriter courier
+\font_default_family default
+\use_non_tex_fonts false
+\font_sc false
+\font_osf false
+\font_sf_scale 100
+\font_tt_scale 100
+
+\graphics default
+\default_output_format default
+\output_sync 0
+\bibtex_command default
+\index_command default
+\float_placement tbph
+\paperfontsize default
+\spacing single
+\use_hyperref true
+\pdf_bookmarks true
+\pdf_bookmarksnumbered false
+\pdf_bookmarksopen false
+\pdf_bookmarksopenlevel 1
+\pdf_breaklinks true
+\pdf_pdfborder true
+\pdf_colorlinks true
+\pdf_backref false
+\pdf_pdfusetitle true
+\papersize default
+\use_geometry true
+\use_amsmath 1
+\use_esint 0
+\use_mhchem 1
+\use_mathdots 1
+\cite_engine basic
+\use_bibtopic false
+\use_indices false
+\paperorientation portrait
+\suppress_date false
+\use_refstyle 0
+\index Index
+\shortcut idx
+\color #008000
+\end_index
+\leftmargin 1in
+\topmargin 1in
+\rightmargin 1in
+\bottommargin 1in
+\secnumdepth 3
+\tocdepth 3
+\paragraph_separation indent
+\paragraph_indentation default
+\quotes_language english
+\papercolumns 1
+\papersides 2
+\paperpagestyle plain
+\tracking_changes false
+\output_changes false
+\html_math_output 0
+\html_css_as_file 0
+\html_be_strict false
+\end_header
+
+\begin_body
+
+\begin_layout Standard
+\noindent
+\align center
+\begin_inset Float figure
+placement H
+wide false
+sideways false
+status open
+
+\begin_layout Plain Layout
+\noindent
+\align center
+\begin_inset Graphics
+ filename cover/cover.pdf
+ width 75page%
+
+\end_inset
+
+
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Standard
+\begin_inset ERT
+status open
+
+\begin_layout Plain Layout
+
+
+\backslash
+thispagestyle{empty}
+\end_layout
+
+\begin_layout Plain Layout
+
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Title
+The PyLith User Manual
+\end_layout
+
+\begin_layout Author
+© University of California, Davis
+\begin_inset Newline newline
+\end_inset
+
+Version 1.7.1
+\end_layout
+
+\begin_layout Date
+\noindent
+\begin_inset ERT
+status collapsed
+
+\begin_layout Plain Layout
+
+
+\backslash
+today
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Standard
+\begin_inset ERT
+status open
+
+\begin_layout Plain Layout
+
+
+\backslash
+frontmatter
+\end_layout
+
+\end_inset
+
+
+\begin_inset CommandInset toc
+LatexCommand tableofcontents
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Standard
+\begin_inset FloatList figure
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Standard
+\begin_inset FloatList table
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Standard
+\begin_inset CommandInset include
+LatexCommand input
+filename "preface.lyx"
+
+\end_inset
+
+
+\begin_inset ERT
+status collapsed
+
+\begin_layout Plain Layout
+
+
+\backslash
+mainmatter
+\end_layout
+
+\end_inset
+
+
+\begin_inset ERT
+status collapsed
+
+\begin_layout Plain Layout
+
+
+\backslash
+raggedbottom
+\end_layout
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Standard
+\begin_inset CommandInset include
+LatexCommand input
+filename "intro/intro.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "governingeqns/governingeqns.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "install/install.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "runpylith/runpylith.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "materials/materials.lyx"
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Standard
+\begin_inset CommandInset include
+LatexCommand input
+filename "boundaryconditions/boundaryconditions.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "tutorials/tutorials.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "benchmarks/benchmarks.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "extending/extending.lyx"
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Standard
+\start_of_appendix
+\begin_inset ERT
+status collapsed
+
+\begin_layout Plain Layout
+
+%dummy comment inserted by tex2lyx to ensure that this paragraph is not
+ empty
+\end_layout
+
+\begin_layout Plain Layout
+
+\end_layout
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "glossary.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "components.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "fileformats/fileformats.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand include
+filename "materials/altformulations.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "analyticalsolns/analyticalsolns.lyx"
+
+\end_inset
+
+
+\begin_inset CommandInset include
+LatexCommand input
+filename "license.lyx"
+
+\end_inset
+
+
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Aagaard et al., 2001a"
+key "Aagaard:etal:2001a"
+
+\end_inset
+
+Aagaard, B.T., J.F.
+ Hall, and T.H.
+ Heaton (2001), Characterization of near-source ground motions with earthquake
+ simulations,
+\emph on
+Earthquake Spectra, 17
+\emph default
+(2), 177-207.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Aagaard et al., 2001b"
+key "Aagaard:etal:2001b"
+
+\end_inset
+
+Aagaard, B.T., T.H.
+ Heaton, and J.F.
+ Hall (2001), Dynamic earthquake ruptures in the presence of lithostatic
+ normal stresses: Implications for friction models and heat production,
+
+\emph on
+Bulletin of the Seismological Society of America, 91
+\emph default
+(6), 1765-1796.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Aagaard et al., 2007"
+key "Aagaard:etal:2007"
+
+\end_inset
+
+Aagaard, B., C.
+ Williams, and M.
+ Knepley (2007), PyLith: A finite-element code for modeling quasi-static
+ and dynamic crustal deformation,
+\emph on
+Eos Trans.
+ AGU, 88
+\emph default
+(52), Fall Meet.
+ Suppl., Abstract T21B-0592.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Aagaard et al., 2008"
+key "Aagaard:etal:2008"
+
+\end_inset
+
+Aagaard, B., C.
+ Williams, and M.
+ Knepley (2008), PyLith: A finite-element code for modeling quasi-static
+ and dynamic crustal deformation,
+\emph on
+Eos Trans.
+ AGU
+\emph default
+,
+\emph on
+89(
+\emph default
+53), Fall Meet.
+ Suppl., Abstract T41A-1925.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Bathe, 1995"
+key "Bathe:1995"
+
+\end_inset
+
+Bathe, K.-J.
+ (1995),
+\shape italic
+Finite-Element Procedures
+\shape default
+, Prentice Hall, Upper Saddle River, New Jersey, 1037 pp.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Ben-Zion and Rice, 1997"
+key "BenZion:Rice:1997"
+
+\end_inset
+
+Ben-Zion, Y.
+ and J.R.
+ Rice (1997), Dynamic simulations of slip on a smooth fault in an elastic
+ solid, J.
+ Geophys.
+ Res., 102, 17,771–17,784.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Brune, 1970"
+key "Brune:1970"
+
+\end_inset
+
+Brune, J.N.
+ (1970), Tectonic stress and spectra of seismic shear waves from earthquakes,
+
+\emph on
+Journal of Geophysical Research, 75
+\emph default
+, 4997-5009.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Day and Ely, 2002"
+key "Day:Ely:2002"
+
+\end_inset
+
+Day, S.M.
+ and G.P.
+ Ely (2002), Effct of a shallow weak zone on fault rupture: Numerical simulation
+ of scale-model experiments,
+\shape italic
+Bull.
+ Seismol.
+ Soc.
+ Am.
+\shape default
+, 92(8), 3022-3041, doi: 10.1785/0120010273.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Drucker and Prager, 1952"
+key "Drucker:Prager:1952"
+
+\end_inset
+
+Drucker, D.
+ C.
+ and Prager, W.
+ (1952).
+ Soil mechanics and plastic analysis for limit design,
+\shape italic
+Quarterly of Applied Mathematics
+\shape default
+,
+\shape italic
+10
+\shape default
+, 157–165.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Liu et al., 2006"
+key "Liu:etal:2006"
+
+\end_inset
+
+Liu, P., R.J.
+ Archuleta, S.H.
+ Hartzell (2006), Prediction of broadband ground-motion time histories:
+ Hybrid low/high-frequency method with correlated random source parameters,
+
+\shape italic
+Bull.
+ Seismol.
+ Soc.
+ Am.
+\shape default
+, 96, 2118-2130.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Kaneko et al., 2008"
+key "Kaneko:etal:2008"
+
+\end_inset
+
+Kaneko, Y., N.
+ Lapusta, and J.-P.
+ Ampuero (2008), Spectral element modeling of spontaneous earthquake rupture
+ on rate and state faults: Effect of velocity-strengthening friction at
+ shallow depths,
+\shape italic
+Journal of Geophysical Research
+\shape default
+, 113, B09317, doi:10.1029/2007JB005553.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Kirby and Kronenberg, 1987"
+key "Kirby:Kronenberg:1987"
+
+\end_inset
+
+Kirby, S.
+ H.
+ and A.
+ K.
+ Kronenberg (1987), Rheology of the lithosphere: Selected topics,
+\shape italic
+Reviews of Geophysics, 25
+\shape default
+, 1219-1244.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Knopoff and Ni, 2001"
+key "Knopoff:Ni:2001"
+
+\end_inset
+
+Knopoff, L.
+ and X.X.
+ Ni (2001), Numerical instability at the edge of a dynamic fracture,
+\emph on
+Geophysical Journal International,
+\emph default
+147(3), 1-6, doi: 10.1046/j.1365-246x.2001.01567.x.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Kojic and Bathe, 1987"
+key "Kojic:Bathe:1987"
+
+\end_inset
+
+Kojic, M.
+ and K.-J.
+ Bathe (1987), The `Effective Stress-Function' Algorithm for Thermo-Elasto-Plast
+icity and Creep,
+\emph on
+Int.
+ J.
+ Num.
+ Meth.
+ Eng
+\emph default
+.
+\emph on
+, 24
+\emph default
+, 1509-1532.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "McGarr, 1988"
+key "McGarr:1988"
+
+\end_inset
+
+McGarr, A.
+ (1988), On the state of lithospheric stress in the absence of applied tectonic
+ forces,
+\shape italic
+Journal of Geophysical Research
+\shape default
+,
+\shape italic
+93
+\shape default
+, 13,609-13,617.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Menke, 1984"
+key "Menke:1984"
+
+\end_inset
+
+Menke, W.
+ (1984),
+\shape italic
+Geophysical Data Analysis: Discrete Inverse Theory
+\shape default
+, Academic Press, Inc., Orlando, 260 pp.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Okada, 1992"
+key "Okada:1992"
+
+\end_inset
+
+Okada, Y., Internal deformation due to shear and tensile faults in a half-space
+ (1992),
+\shape italic
+Bull.
+ Seismol.
+ Soc.
+ Am.
+\shape default
+,
+\shape italic
+83
+\shape default
+, 1018-1040.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Paterson, 1994"
+key "Paterson:1994"
+
+\end_inset
+
+Paterson, W.
+ S.
+ B.
+ (1994),
+\shape italic
+The Physics of Glaciers, Third Edition
+\shape default
+, Elsevier Science Ltd., Oxford, 480 pp.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Prentice, 1968"
+key "Prentice:1968"
+
+\end_inset
+
+Prentice, J.
+ H, (1968), Dimensional problem of the power law in rheology,
+\shape italic
+Nature
+\shape default
+,
+\shape italic
+217
+\shape default
+, 157.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Savage and Prescott, 1978"
+key "Savage:Prescott:1978"
+
+\end_inset
+
+Savage, J.
+ C.
+ and W.
+ H.
+ Prescott (1978), Asthenosphere readjustment and the earthquake cycle,
+\shape italic
+Journal of Geophysical
+\shape default
+
+\shape italic
+Research
+\shape default
+\emph on
+, 83
+\emph default
+, 3369-3376.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Taylor, 2003"
+key "Taylor:2003"
+
+\end_inset
+
+Taylor, R.L.
+ (2003), `FEAP--A Finite Element Analysis Program',
+\shape italic
+Version 7.5 Theory Manual
+\shape default
+, 154 pp.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Timoshenko and Goodier, 1987"
+key "Timoshenko:Goodier:1987"
+
+\end_inset
+
+Timoshenko, S.P.
+ and J.N.
+ Goodier (1987),
+\shape italic
+Theory of Elasticity, Third Edition
+\shape default
+, McGraw-Hill, New York, 567 pp.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Williams et al., 2005"
+key "Williams:etal:2005"
+
+\end_inset
+
+Williams, C.A., B.
+ Aagaard, and M.G.
+ Knepley (2005), Development of software for studying earthquakes across
+ multiple spatial and temporal scales by coupling quasi-static and dynamic
+ simulations,
+\emph on
+Eos Trans.
+ AGU, 86
+\emph default
+(52), Fall Meet.
+ Suppl., Abstract S53A-1072.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Williams, 2006"
+key "Williams:2006"
+
+\end_inset
+
+Williams, C.A.
+ (2006), Development of a package for modeling stress in the lithosphere,
+
+\emph on
+Eos Trans.
+ AGU,
+\emph default
+
+\emph on
+87
+\emph default
+(36), Jt.
+ Assem.
+ Suppl., Abstract T24A-01 Invited.
+\end_layout
+
+\begin_layout Bibliography
+\labelwidthstring Bibliography
+\begin_inset CommandInset bibitem
+LatexCommand bibitem
+label "Zienkiewicz and Taylor, 2000"
+key "Zienkiewicz:Taylor:2000"
+
+\end_inset
+
+Zienkiewicz, O.C.
+ and R.L.
+ Taylor (2000),
+\shape italic
+The Finite Element Method, Fifth Edition, Volume 2: Solid Mechanics
+\shape default
+, Butterworth-Heinemann, Oxford, 459 pp.125
+\end_layout
+
+\end_body
+\end_document
More information about the CIG-COMMITS
mailing list