[cig-commits] r20420 - seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace

[carltape at geodynamics.org]

Author: carltape
Date: 2012-06-26 22:47:47 -0700 (Tue, 26 Jun 2012)
New Revision: 20420

Modified:
   seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README
   seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README_kernel
Log:
fixed a couple typos in README_kernel


Modified: seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README
===================================================================
--- seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README	2012-06-26 21:32:10 UTC (rev 20419)
+++ seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README	2012-06-27 05:47:47 UTC (rev 20420)
@@ -8,7 +8,13 @@
 step-by-step tutorial:
 
 0. check that all software is available (or that modules are loaded):
-     intel/openmpi, cubit, scotch, python, gnuplot (or xmgrace)
+	openmpi: > which mpirun
+        cubit:   > which cubit
+        scotch:  > which gout
+        python:  > which python
+     optional:
+        gnuplot: > which gnuplot
+        xmgrace: > which xmgrace
 
 1. configure package:
 

Modified: seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README_kernel
===================================================================
--- seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README_kernel	2012-06-26 21:32:10 UTC (rev 20419)
+++ seismo/3D/SPECFEM3D/trunk/examples/homogeneous_halfspace/README_kernel	2012-06-27 05:47:47 UTC (rev 20420)
@@ -21,7 +21,7 @@
      update the Par_file:
 
      > cd /SPECFEM3D
-     > ./UTILS/change_simulation_type.pl -F
+     > ./utils/change_simulation_type.pl -F
 
      or change manually in /SPECFEM3D/in_data_files/Par_file:
      ...
@@ -67,21 +67,20 @@
    - setup adjoint stations file STATIONS_ADJOINT containing the receiver stations locations
      which will have adjoint source files in in_out_files/SEM/:
      > cd /SPECFEM3D
-     > cp examples/homogeneous_halfspace/STATIONS_ADJOINT in_data_files/
+     > cp examples/homogeneous_halfspace/in_data_files/STATIONS_ADJOINT in_data_files/
 
 
 3. run adjoint simulation with restored backward wavefields:
 
    - update the Par_file:
      > cd /SPECFEM3D
-     > ./UTILS/change_simulation_type.pl -b
+     > ./utils/change_simulation_type.pl -b
 
      or change manually in /SPECFEM3D/in_data_files/Par_file:
      # forward or adjoint simulation
      SIMULATION_TYPE                 = 3
      SAVE_FORWARD                    = .false.
 
-
    - run the backward simulation, submitting the job script:
      > qsub go_solver_pbs.bash
 
@@ -95,7 +94,6 @@
           in_out_files/DATABASES_MPI/proc000***_rho_kernel.bin
           in_out_files/DATABASES_MPI/proc000***_rhop_kernel.bin
 
-
    - visualize with Paraview, e.g. :
       > cd /SPECFEM3D
       > make xcombine_vol_data
@@ -103,8 +101,10 @@
       > ./xcombine_vol_data 0 3 kappa_kernel ../in_out_files/DATABASES_MPI/ ../in_out_files/OUTPUT_FILES/ 1
 
      where we use the partitions with id 0 to 3 to include all 4 processor partitions.
+     By default, this will produce the vtk file /SPECFEM3D/in_out_files/OUTPUT_FILES/kappa_kernel.vtk
+     This file can be visualized using Paraview.
 
-
+     OPTIONAL:
      To convert the mesh format to VTK, you can use utils/Visualization/Paraview/mesh2vtu:
       > cd utils/Visualization/Paraview/mesh2vtu
      Modify the Makefile according to your library paths and compile mesh2vtu: