[cig-commits] r22282 - short/3D/PyLith/branches/v1.7-trunk/doc/userguide

[brad at geodynamics.org]

Author: brad
Date: 2013-06-14 15:14:18 -0700 (Fri, 14 Jun 2013)
New Revision: 22282

Modified:
   short/3D/PyLith/branches/v1.7-trunk/doc/userguide/preface.lyx
Log:
Updated citation info.

Modified: short/3D/PyLith/branches/v1.7-trunk/doc/userguide/preface.lyx
===================================================================
--- short/3D/PyLith/branches/v1.7-trunk/doc/userguide/preface.lyx	2013-06-14 22:13:53 UTC (rev 22281)
+++ short/3D/PyLith/branches/v1.7-trunk/doc/userguide/preface.lyx	2013-06-14 22:14:18 UTC (rev 22282)
@@ -1,280 +1,253 @@
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-About This Document
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-This document is organized into two parts.
- The first part begins with an introduction to PyLith and discusses the
- types of problems that PyLith can solve and how to run the software; the
- second part provides appendices and references.
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-\begin_layout Section
-Who Will Use This Documentation
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-This documentation is aimed at two categories of users: scientists who prefer
- to use prepackaged and specialized analysis tools, and experienced computationa
-l Earth scientists.
- Of the latter, there are likely to be two classes of users: those who just
- run models, and those who modify the source code.
- Users who modify the source are likely to have familiarity with scripting,
- software installation, and programming, but are not necessarily professional
- programmers.
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-The Computational Infrastructure for Geodynamics (CIG) 
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-geodynamics.org
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- is making this source code available to you at no cost in hopes that the
- software will enhance your research in geophysics.
- A number of individuals have contributed a significant portion of their
- careers toward the development of this software.
- It is essential that you recognize these individuals in the normal scientific
- practice by citing the appropriate peer-reviewed papers and making appropriate
- acknowledgements in talks and publications.
- At this time there are no refereed journal articles discussing the design
- and implementation of PyLith, so we request that you cite four AGU meeting
- abstracts associated with PyLith:
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-Williams, C.A., B.
- Aagaard, M.G.
- Knepley (2005), Development of software for studying earthquakes across
- multiple spatial and temporal scales by coupling quasi-static and dynamic
- simulations, 
-\emph on
-Eos Trans.
- AGU, 86
-\emph default
-(52), Fall Meet.
- Suppl., Abstract S53A-1072.
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-Williams, C.A.
- (2006), Development of a package for modeling stress in the lithosphere,
- 
-\emph on
-Eos Trans.
- AGU, 87
-\emph default
-(36), Jt.
- Assem.
- Suppl., Abstract T24A-01 Invited.
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-
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-Aagaard, B., C.
- Williams, M.
- Knepley (2007), PyLith: A finite-element code for modeling quasi-static
- and dynamic crustal deformation, 
-\emph on
-Eos Trans.
- AGU, 8
-\emph default
-8(52), Fall Meet.
- Suppl., Abstract T21B-0592.
-\end_layout
-
-\begin_layout Itemize
-Aagaard, B., C.
- Williams, M.
- Knepley (2008), PyLith: A finite-element code for modeling quasi-static
- and dynamic crustal deformation, 
-\emph on
-Eos Trans.
- AGU, 89
-\emph default
-(53), Fall Meet.
- Suppl., Abstract T41A-1925.
-\end_layout
-
-\begin_layout Standard
-To cite this manual, use:
-\end_layout
-
-\begin_layout Itemize
-Aagaard, B., S.
- Kientz, M.
- Knepley, S.
- Somala, L.
- Strand, and C.
- Williams (2011), 
-\emph on
-PyLith User Manual, Version 1.9.0.
-
-\emph default
- Davis, CA: Computational Infrastructure of Geodynamics.
-\begin_inset Newline newline
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-URL: geodynamics.org/cig/software/pylith/pylith_manual-1.9.0.pdf
-\end_layout
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-
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-Current PyLith development is supported by the CIG, and internal GNS Science
- 
-\begin_inset Flex URL
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-
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- Advanced Simulation and Computing program and the National Science Foundation's
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-\end_layout
-
-\begin_layout Standard
-This material is based upon work supported by the National Science Foundation
- under Grants No.
- 0313238, 0745391, and EAR-0949446.
- Any opinions, findings, and conclusions or recommendations expressed in
- this material are those of the author(s) and do not necessarily reflect
- the views of the National Science Foundation.
-\end_layout
-
-\begin_layout Section
-Request for Comments
-\end_layout
-
-\begin_layout Standard
-Your suggestions and corrections can only improve this documentation.
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-cig-short at geodynamics.org
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+About This Document
+\end_layout
+
+\begin_layout Standard
+This document is organized into two parts.
+ The first part begins with an introduction to PyLith and discusses the
+ types of problems that PyLith can solve and how to run the software; the
+ second part provides appendices and references.
+\end_layout
+
+\begin_layout Section
+Who Will Use This Documentation
+\end_layout
+
+\begin_layout Standard
+This documentation is aimed at two categories of users: scientists who prefer
+ to use prepackaged and specialized analysis tools, and experienced computationa
+l Earth scientists.
+ Of the latter, there are likely to be two classes of users: those who just
+ run models, and those who modify the source code.
+ Users who modify the source are likely to have familiarity with scripting,
+ software installation, and programming, but are not necessarily professional
+ programmers.
+\end_layout
+
+\begin_layout Section
+Citation
+\end_layout
+
+\begin_layout Standard
+The Computational Infrastructure for Geodynamics (CIG) 
+\begin_inset Flex URL
+status collapsed
+
+\begin_layout Plain Layout
+
+geodynamics.org
+\end_layout
+
+\end_inset
+
+ is making this source code available to you at no cost in hopes that the
+ software will enhance your research in geophysics.
+ A number of individuals have contributed a significant portion of their
+ careers toward the development of this software.
+ It is essential that you recognize these individuals in the normal scientific
+ practice by citing the appropriate peer-reviewed papers and making appropriate
+ acknowledgements in talks and publications.
+ The following peer-reviewed paper discussed the development of PyLith:
+\end_layout
+
+\begin_layout Itemize
+Aagaard, B.
+ T.
+ M.
+ G.
+ Knepley, and C.
+ A.
+ Williams (2013).
+ A domain decomposition approach to implementing fault slip in finite-element
+ models of quasi-static and dynamic crustal deformation, 
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+Journal of Geophysical Research: Solid Earth
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+, 118, doi: 10.1002/jgrb.50217.
+\end_layout
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+\end_layout
+
+\begin_layout Itemize
+Aagaard, B., S.
+ Kientz, M.
+ Knepley, S.
+ Somala, L.
+ Strand, and C.
+ Williams (2011), 
+\emph on
+PyLith User Manual, Version 1.9.0.
+
+\emph default
+ Davis, CA: Computational Infrastructure of Geodynamics.
+\begin_inset Newline newline
+\end_inset
+
+URL: geodynamics.org/cig/software/pylith/pylith_manual-1.9.0.pdf
+\end_layout
+
+\begin_layout Section
+Support
+\end_layout
+
+\begin_layout Standard
+Current PyLith development is supported by the CIG, and internal GNS Science
+ 
+\begin_inset Flex URL
+status open
+
+\begin_layout Plain Layout
+
+www.gns.cri.nz
+\end_layout
+
+\end_inset
+
+ and U.S.
+ Geological Survey 
+\begin_inset Flex URL
+status collapsed
+
+\begin_layout Plain Layout
+
+www.usgs.gov
+\end_layout
+
+\end_inset
+
+ funding.
+ Pyre development was funded by the Department of Energy's 
+\begin_inset Flex URL
+status collapsed
+
+\begin_layout Plain Layout
+
+www.doe.gov/engine/content.do
+\end_layout
+
+\end_inset
+
+ Advanced Simulation and Computing program and the National Science Foundation's
+ Information Technology Research (ITR) program.
+\end_layout
+
+\begin_layout Standard
+This material is based upon work supported by the National Science Foundation
+ under Grants No.
+ 0313238, 0745391, and EAR-0949446.
+ Any opinions, findings, and conclusions or recommendations expressed in
+ this material are those of the author(s) and do not necessarily reflect
+ the views of the National Science Foundation.
+\end_layout
+
+\begin_layout Section
+Acknowlegements
+\end_layout
+
+\begin_layout Standard
+Many members of the community contribute to PyLith through reporting bugs,
+ suggesting new features and improvements, running benchmarks, and asking
+ questions about the software.
+ In particular, we thank Surendra Sumala for contributing to the development
+ of the fault friction implementation.
+\end_layout
+
+\begin_layout Section
+Request for Comments
+\end_layout
+
+\begin_layout Standard
+Your suggestions and corrections can only improve this documentation.
+ Please report any errors, inaccuracies, or typos to the CIG Short-Term
+ Tectonics email list 
+\begin_inset Flex URL
+status open
+
+\begin_layout Plain Layout
+
+cig-short at geodynamics.org
+\end_layout
+
+\end_inset
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+.
+ 
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