[cig-commits] [commit] devel,master: minor restructuring of examples files; adding flag USE_SOURCES_RECVS_Z in constants.h for locating source/receivers in randomly shaped meshes; updates some files to avoid compiler warnings and unifies character lengths for LOCAL_PATH; updates manual (706d9fc)

cig_noreply at geodynamics.org cig_noreply at geodynamics.org
Wed Jun 18 16:47:47 PDT 2014


Repository : https://github.com/geodynamics/specfem3d

On branches: devel,master
Link       : https://github.com/geodynamics/specfem3d/compare/6026e367984905ab133865f62fa6293b343759b9...47f703851338234f96397e7da9fbff63d8178b8a

>---------------------------------------------------------------

commit 706d9fc67abb6203443a53142625b22014bcf717
Author: Daniel Peter <peterda at ethz.ch>
Date:   Sun Nov 21 03:28:55 2010 +0000

    minor restructuring of examples files; adding flag USE_SOURCES_RECVS_Z in constants.h for locating source/receivers in randomly shaped meshes; updates some files to avoid compiler warnings and unifies character lengths for LOCAL_PATH; updates manual


>---------------------------------------------------------------

706d9fc67abb6203443a53142625b22014bcf717
 homogeneous_halfspace/{ => in_data_files}/CMTSOLUTION     |   0
 homogeneous_halfspace/{ => in_data_files}/Par_file        |   0
 homogeneous_halfspace/{ => in_data_files}/STATIONS        |   0
 .../{ => in_data_files}/STATIONS_ADJOINT                  |   0
 .../VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH}/README  |   0
 .../REF_SEIS/Ux_file_Ycste_0031.txt                       |   0
 .../REF_SEIS/Ux_file_Ycste_0031.txt.pdf                   | Bin
 .../REF_SEIS/Ux_file_Ycste_0055.txt                       |   0
 .../REF_SEIS/Ux_file_Ycste_0055.txt.pdf                   | Bin
 .../REF_SEIS/Uz_file_Ycste_0031.txt                       |   0
 .../REF_SEIS/Uz_file_Ycste_0031.txt.pdf                   | Bin
 .../REF_SEIS/Uz_file_Ycste_0055.txt                       |   0
 .../REF_SEIS/Uz_file_Ycste_0055.txt.pdf                   | Bin
 .../common_grid.h                                         |   0
 .../common_solve.h                                        |   0
 .../comp_traces_gnuplot_x.f                               |   0
 .../comp_traces_gnuplot_z.f                               |   0
 .../dble_prec_michel.f                                    |   0
 .../VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH}/endw1.f |   0
 .../VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH}/endw2.f |   0
 .../gammaf.f                                              |   0
 .../VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH}/hdgll.f |   0
 .../VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH}/jacg.f  |   0
 .../jacobf.f                                              |   0
 .../make_meshfem3D                                        |   0
 .../make_specfem3D                                        |   0
 .../plotpost.f                                            |   0
 .../pndleg.f                                              |   0
 .../VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH}/pnleg.f |   0
 .../pnormj.f                                              |   0
 .../read_sismos.f                                         |   0
 .../VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH}/reyk.da |   0
 .../reyk_x.da                                             |   0
 .../reyk_z.da                                             |   0
 .../specfem3D.f                                           |   0
 .../tokyo_generate.f                                      |   0
 .../txt_2_big_sep.f                                       |   0
 .../VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH}/zwgjd.f |   0
 .../zwgljd.f                                              |   0
 layered_halfspace/{ => in_data_files}/CMTSOLUTION         |   0
 layered_halfspace/{ => in_data_files}/Par_file            |   0
 layered_halfspace/{ => in_data_files}/STATIONS            |   0
 layered_halfspace/{ => in_data_files}/STATIONS_X          |   0
 layered_halfspace/{ => in_data_files}/STATIONS_Y          |   0
 noise_tomography/{README_NOISE_TOMOGRAPHY => README}      |  14 +++++++++-----
 noise_tomography/bin/adj_traveltime_filter.f90            |   4 ++--
 noise_tomography/{pre-processing => pre-processing.sh}    |   0
 tomographic_model/{ => in_data_files}/CMTSOLUTION         |   0
 tomographic_model/{ => in_data_files}/Par_file            |   0
 tomographic_model/{ => in_data_files}/STATIONS            |   0
 waterlayered_halfspace/{ => in_data_files}/CMTSOLUTION    |   0
 waterlayered_halfspace/{ => in_data_files}/Par_file       |   0
 waterlayered_halfspace/{ => in_data_files}/STATIONS       |   0
 53 files changed, 11 insertions(+), 7 deletions(-)

diff --git a/homogeneous_halfspace/CMTSOLUTION b/homogeneous_halfspace/in_data_files/CMTSOLUTION
similarity index 100%
rename from homogeneous_halfspace/CMTSOLUTION
rename to homogeneous_halfspace/in_data_files/CMTSOLUTION
diff --git a/homogeneous_halfspace/Par_file b/homogeneous_halfspace/in_data_files/Par_file
similarity index 100%
rename from homogeneous_halfspace/Par_file
rename to homogeneous_halfspace/in_data_files/Par_file
diff --git a/homogeneous_halfspace/STATIONS b/homogeneous_halfspace/in_data_files/STATIONS
similarity index 100%
rename from homogeneous_halfspace/STATIONS
rename to homogeneous_halfspace/in_data_files/STATIONS
diff --git a/homogeneous_halfspace/STATIONS_ADJOINT b/homogeneous_halfspace/in_data_files/STATIONS_ADJOINT
similarity index 100%
rename from homogeneous_halfspace/STATIONS_ADJOINT
rename to homogeneous_halfspace/in_data_files/STATIONS_ADJOINT
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/README b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/README
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/README
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/README
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0031.txt b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0031.txt
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0031.txt
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0031.txt
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0031.txt.pdf b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0031.txt.pdf
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0031.txt.pdf
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0031.txt.pdf
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0055.txt b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0055.txt
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0055.txt
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0055.txt
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0055.txt.pdf b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0055.txt.pdf
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0055.txt.pdf
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Ux_file_Ycste_0055.txt.pdf
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0031.txt b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0031.txt
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0031.txt
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0031.txt
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0031.txt.pdf b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0031.txt.pdf
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0031.txt.pdf
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0031.txt.pdf
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0055.txt b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0055.txt
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0055.txt
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0055.txt
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0055.txt.pdf b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0055.txt.pdf
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0055.txt.pdf
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/REF_SEIS/Uz_file_Ycste_0055.txt.pdf
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/common_grid.h b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/common_grid.h
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/common_grid.h
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/common_grid.h
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/common_solve.h b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/common_solve.h
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/common_solve.h
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/common_solve.h
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/comp_traces_gnuplot_x.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/comp_traces_gnuplot_x.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/comp_traces_gnuplot_x.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/comp_traces_gnuplot_x.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/comp_traces_gnuplot_z.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/comp_traces_gnuplot_z.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/comp_traces_gnuplot_z.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/comp_traces_gnuplot_z.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/dble_prec_michel.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/dble_prec_michel.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/dble_prec_michel.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/dble_prec_michel.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/endw1.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/endw1.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/endw1.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/endw1.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/endw2.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/endw2.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/endw2.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/endw2.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/gammaf.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/gammaf.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/gammaf.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/gammaf.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/hdgll.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/hdgll.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/hdgll.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/hdgll.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/jacg.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/jacg.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/jacg.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/jacg.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/jacobf.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/jacobf.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/jacobf.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/jacobf.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/make_meshfem3D b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/make_meshfem3D
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/make_meshfem3D
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/make_meshfem3D
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/make_specfem3D b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/make_specfem3D
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/make_specfem3D
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/make_specfem3D
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/plotpost.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/plotpost.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/plotpost.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/plotpost.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pndleg.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pndleg.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pndleg.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pndleg.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pnleg.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pnleg.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pnleg.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pnleg.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pnormj.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pnormj.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pnormj.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/pnormj.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/read_sismos.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/read_sismos.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/read_sismos.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/read_sismos.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk.da b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk.da
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk.da
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk.da
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk_x.da b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk_x.da
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk_x.da
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk_x.da
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk_z.da b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk_z.da
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk_z.da
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/reyk_z.da
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/specfem3D.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/specfem3D.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/specfem3D.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/specfem3D.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/tokyo_generate.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/tokyo_generate.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/tokyo_generate.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/tokyo_generate.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/txt_2_big_sep.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/txt_2_big_sep.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/txt_2_big_sep.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/txt_2_big_sep.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/zwgjd.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/zwgjd.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/zwgjd.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/zwgjd.f
diff --git a/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/zwgljd.f b/layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/zwgljd.f
similarity index 100%
rename from VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/zwgljd.f
rename to layered_halfspace/VALIDATION_3D_SEM_SIMPLER_LAYER_SOURCE_DEPTH/zwgljd.f
diff --git a/layered_halfspace/CMTSOLUTION b/layered_halfspace/in_data_files/CMTSOLUTION
similarity index 100%
rename from layered_halfspace/CMTSOLUTION
rename to layered_halfspace/in_data_files/CMTSOLUTION
diff --git a/layered_halfspace/Par_file b/layered_halfspace/in_data_files/Par_file
similarity index 100%
rename from layered_halfspace/Par_file
rename to layered_halfspace/in_data_files/Par_file
diff --git a/layered_halfspace/STATIONS b/layered_halfspace/in_data_files/STATIONS
similarity index 100%
rename from layered_halfspace/STATIONS
rename to layered_halfspace/in_data_files/STATIONS
diff --git a/layered_halfspace/STATIONS_X b/layered_halfspace/in_data_files/STATIONS_X
similarity index 100%
rename from layered_halfspace/STATIONS_X
rename to layered_halfspace/in_data_files/STATIONS_X
diff --git a/layered_halfspace/STATIONS_Y b/layered_halfspace/in_data_files/STATIONS_Y
similarity index 100%
rename from layered_halfspace/STATIONS_Y
rename to layered_halfspace/in_data_files/STATIONS_Y
diff --git a/noise_tomography/README_NOISE_TOMOGRAPHY b/noise_tomography/README
similarity index 90%
rename from noise_tomography/README_NOISE_TOMOGRAPHY
rename to noise_tomography/README
index 9ff6eb4..5cf025c 100644
--- a/noise_tomography/README_NOISE_TOMOGRAPHY
+++ b/noise_tomography/README
@@ -1,3 +1,7 @@
+----------------------------------------------------------------------
+README
+----------------------------------------------------------------------
+
 ////////////////////////////////WARNING///////////////////////////////////////////
 Do ***NOT*** try this example until you have become familiar with other examples
 Also, make sure that you understand the theory in:
@@ -16,10 +20,10 @@ Noise Cross-Correlation Sensitivity Kernels (Tromp et al., 2010, GJI)
 1. Structure
 **************
 
-   This file                                                  ---  ./README_NOISE_TOMOGRAPHY
+   This file                                                  ---  ./README
    Four folders contain default input files for the example   ---  ./bin      ./DATABASES_MPI       ./in_data_files       ./NOISE_TOMOGRAPHY
    Two matlab files may help you to calculate noise spectrum  ---  ./NOISE_TOMOGRAPHY.m     ./PetersonNoiseModel.m
-   Job script                                                 ---  ./pre-processing
+   Job script                                                 ---  ./pre-processing.sh
    One folder shows the reference kernels                     ---  ./REF_KERNELS
 
 **************
@@ -28,10 +32,10 @@ Noise Cross-Correlation Sensitivity Kernels (Tromp et al., 2010, GJI)
 
    If you have at least 4 cores and mpif90 works on your workstation, you can run this example on your workstation. Simply use:
    (after configuration, for example, "./configure FC=ifort MPIFC=mpif90". Should you be confused, familiarize yourself with other examples first)
-   ./pre-processing
+   ./pre-processing.sh
 
-   If you don't, you have to follow commands listed in ./pre-processing, make modifications if needed.
-   Those commands in ./pre-processing should be self-explanatory.
+   If you don't, you have to follow commands listed in ./pre-processing.sh, make modifications if needed.
+   Those commands in ./pre-processing.sh should be self-explanatory.
    You may want to compare them with descriptions in the Manual --- ../../doc/USER_MANUAL/manual_SPECFEM3D.pdf
 
 **************
diff --git a/noise_tomography/bin/adj_traveltime_filter.f90 b/noise_tomography/bin/adj_traveltime_filter.f90
index faed0d5..19f667c 100644
--- a/noise_tomography/bin/adj_traveltime_filter.f90
+++ b/noise_tomography/bin/adj_traveltime_filter.f90
@@ -20,8 +20,8 @@ double precision :: data_picked(nstep,nrec),syn_picked(nstep,nrec),data_filtered
 double precision :: data_temp(nstep),syn_temp(nstep),data_direct(nstep),syn_direct(nstep)
 double precision :: trace_data_max(nrec), trace_syn_max(nrec), t(nstep),data_max,syn_max
 integer :: flag(nrec), irec, itime, length_window, i_start_window, i_end_window
-character(len=150) :: station_name,file_data,file_syn,file_data_direct,file_syn_direct
-character(len=150) :: file_adj,file_adj_density, file_misfit, file_adj_BHX,file_adj_BHZ, file_adj_zeros
+character(len=256) :: station_name,file_data,file_syn,file_data_direct,file_syn_direct
+character(len=256) :: file_adj,file_adj_density, file_misfit, file_adj_BHX,file_adj_BHZ, file_adj_zeros
 double precision :: c(nstep), data_trace(nstep), syn_trace(nstep)
 integer :: I(nstep)
 double precision :: Norm_data_crit,Norm_syn_crit,AMP,Norm_data,Norm_syn,Norm,Norm_adj_temp
diff --git a/noise_tomography/pre-processing b/noise_tomography/pre-processing.sh
similarity index 100%
rename from noise_tomography/pre-processing
rename to noise_tomography/pre-processing.sh
diff --git a/tomographic_model/CMTSOLUTION b/tomographic_model/in_data_files/CMTSOLUTION
similarity index 100%
rename from tomographic_model/CMTSOLUTION
rename to tomographic_model/in_data_files/CMTSOLUTION
diff --git a/tomographic_model/Par_file b/tomographic_model/in_data_files/Par_file
similarity index 100%
rename from tomographic_model/Par_file
rename to tomographic_model/in_data_files/Par_file
diff --git a/tomographic_model/STATIONS b/tomographic_model/in_data_files/STATIONS
similarity index 100%
rename from tomographic_model/STATIONS
rename to tomographic_model/in_data_files/STATIONS
diff --git a/waterlayered_halfspace/CMTSOLUTION b/waterlayered_halfspace/in_data_files/CMTSOLUTION
similarity index 100%
rename from waterlayered_halfspace/CMTSOLUTION
rename to waterlayered_halfspace/in_data_files/CMTSOLUTION
diff --git a/waterlayered_halfspace/Par_file b/waterlayered_halfspace/in_data_files/Par_file
similarity index 100%
rename from waterlayered_halfspace/Par_file
rename to waterlayered_halfspace/in_data_files/Par_file
diff --git a/waterlayered_halfspace/STATIONS b/waterlayered_halfspace/in_data_files/STATIONS
similarity index 100%
rename from waterlayered_halfspace/STATIONS
rename to waterlayered_halfspace/in_data_files/STATIONS



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