[cig-commits] [commit] devel, master: fixed a couple typos in README_kernel (1245733)

cig_noreply at geodynamics.org cig_noreply at geodynamics.org
Wed Jun 18 16:49:25 PDT 2014


Repository : https://github.com/geodynamics/specfem3d

On branches: devel,master
Link       : https://github.com/geodynamics/specfem3d/compare/6026e367984905ab133865f62fa6293b343759b9...47f703851338234f96397e7da9fbff63d8178b8a

>---------------------------------------------------------------

commit 1245733cd5162e01c95440659be4c112f0fe02c4
Author: Carl Tape <carltape at gi.alaska.edu>
Date:   Wed Jun 27 05:47:47 2012 +0000

    fixed a couple typos in README_kernel


>---------------------------------------------------------------

1245733cd5162e01c95440659be4c112f0fe02c4
 homogeneous_halfspace/README        |  8 +++++++-
 homogeneous_halfspace/README_kernel | 12 ++++++------
 2 files changed, 13 insertions(+), 7 deletions(-)

diff --git a/homogeneous_halfspace/README b/homogeneous_halfspace/README
index 9c025eb..817be5f 100644
--- a/homogeneous_halfspace/README
+++ b/homogeneous_halfspace/README
@@ -8,7 +8,13 @@ constant elastic material property, using CUBIT and runs a forward simulation.
 step-by-step tutorial:
 
 0. check that all software is available (or that modules are loaded):
-     intel/openmpi, cubit, scotch, python, gnuplot (or xmgrace)
+	openmpi: > which mpirun
+        cubit:   > which cubit
+        scotch:  > which gout
+        python:  > which python
+     optional:
+        gnuplot: > which gnuplot
+        xmgrace: > which xmgrace
 
 1. configure package:
 
diff --git a/homogeneous_halfspace/README_kernel b/homogeneous_halfspace/README_kernel
index 09b3b70..406a17d 100644
--- a/homogeneous_halfspace/README_kernel
+++ b/homogeneous_halfspace/README_kernel
@@ -21,7 +21,7 @@ step-by-step kernel tutorial:
      update the Par_file:
 
      > cd /SPECFEM3D
-     > ./UTILS/change_simulation_type.pl -F
+     > ./utils/change_simulation_type.pl -F
 
      or change manually in /SPECFEM3D/in_data_files/Par_file:
      ...
@@ -67,21 +67,20 @@ step-by-step kernel tutorial:
    - setup adjoint stations file STATIONS_ADJOINT containing the receiver stations locations
      which will have adjoint source files in in_out_files/SEM/:
      > cd /SPECFEM3D
-     > cp examples/homogeneous_halfspace/STATIONS_ADJOINT in_data_files/
+     > cp examples/homogeneous_halfspace/in_data_files/STATIONS_ADJOINT in_data_files/
 
 
 3. run adjoint simulation with restored backward wavefields:
 
    - update the Par_file:
      > cd /SPECFEM3D
-     > ./UTILS/change_simulation_type.pl -b
+     > ./utils/change_simulation_type.pl -b
 
      or change manually in /SPECFEM3D/in_data_files/Par_file:
      # forward or adjoint simulation
      SIMULATION_TYPE                 = 3
      SAVE_FORWARD                    = .false.
 
-
    - run the backward simulation, submitting the job script:
      > qsub go_solver_pbs.bash
 
@@ -95,7 +94,6 @@ step-by-step kernel tutorial:
           in_out_files/DATABASES_MPI/proc000***_rho_kernel.bin
           in_out_files/DATABASES_MPI/proc000***_rhop_kernel.bin
 
-
    - visualize with Paraview, e.g. :
       > cd /SPECFEM3D
       > make xcombine_vol_data
@@ -103,8 +101,10 @@ step-by-step kernel tutorial:
       > ./xcombine_vol_data 0 3 kappa_kernel ../in_out_files/DATABASES_MPI/ ../in_out_files/OUTPUT_FILES/ 1
 
      where we use the partitions with id 0 to 3 to include all 4 processor partitions.
+     By default, this will produce the vtk file /SPECFEM3D/in_out_files/OUTPUT_FILES/kappa_kernel.vtk
+     This file can be visualized using Paraview.
 
-
+     OPTIONAL:
      To convert the mesh format to VTK, you can use utils/Visualization/Paraview/mesh2vtu:
       > cd utils/Visualization/Paraview/mesh2vtu
      Modify the Makefile according to your library paths and compile mesh2vtu:



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