[cig-commits] [commit] devel,master: moves CPML examples to subdirectory examples/CPML_examples/; moves fault examples to examples/fault_examples/; updates scripts cubit2specfem3d.py and boundary_definition.py in CUBIT/ directory to be usable with Q_kappa; links examples scripts cubit2specfem3d.py and boundary_definition.py to the ones in CUBIT/ directory; adds some README files to example subdirectories (4fa715e)

cig_noreply at geodynamics.org cig_noreply at geodynamics.org
Wed Jun 18 16:53:26 PDT 2014


Repository : https://github.com/geodynamics/specfem3d

On branches: devel,master
Link       : https://github.com/geodynamics/specfem3d/compare/6026e367984905ab133865f62fa6293b343759b9...47f703851338234f96397e7da9fbff63d8178b8a

>---------------------------------------------------------------

commit 4fa715e6a73cc91df70ac187d390f1d918af3468
Author: Daniel Peter <peterda at ethz.ch>
Date:   Tue Jun 25 14:13:49 2013 +0000

    moves CPML examples to subdirectory examples/CPML_examples/; moves fault examples to examples/fault_examples/; updates scripts cubit2specfem3d.py and boundary_definition.py in CUBIT/ directory to be usable with Q_kappa; links examples scripts cubit2specfem3d.py and boundary_definition.py to the ones in CUBIT/ directory; adds some README files to example subdirectories


>---------------------------------------------------------------

4fa715e6a73cc91df70ac187d390f1d918af3468
 .../CMTSOLUTION                                    |   0
 ...BIT_notes_from_Emanuele_Casarotti_16oct2012.pdf | Bin
 .../absorbing_cpml_file                            |   0
 .../free_or_absorbing_surface_file_zmax            |   0
 ...hicknesses_to_use_to_define_the_CPML_layers.txt |   0
 .../materials_file                                 |   0
 .../CPML_realistic_mesh_with_topography}/mesh_file |   0
 .../nodes_coords_file                              |   0
 .../nummaterial_velocity_file                      |   0
 ...ture_of_this_mesh_with_CPML_flags_in_colors.jpg | Bin
 ...ture_of_this_two_layer_mesh_with_topography.jpg | Bin
 .../size_of_this_mesh.txt                          |   0
 .../test_cmpl_2layers.cub                          | Bin
 CPML_examples/README                               |  10 +
 .../DATA/CMTSOLUTION                               |   0
 .../DATA/FORCESOLUTION                             |   0
 .../DATA/Par_file                                  |   0
 .../DATA/STATIONS                                  |   0
 .../DATA/STATIONS_ADJOINT                          |   0
 .../HOWTO_run_this_example.txt                     |   0
 .../MESH-default/absorbing_cpml_file               |   0
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 .../MESH-default/absorbing_surface_file_xmax       |   0
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 .../MESH-default/absorbing_surface_file_ymax       |   0
 .../MESH-default/absorbing_surface_file_ymin       |   0
 .../free_or_absorbing_surface_file_zmax            |   0
 .../MESH-default/materials_file                    |   0
 .../MESH-default/mesh_file                         |   0
 .../MESH-default/nodes_coords_file                 |   0
 .../MESH-default/nummaterial_velocity_file         |   0
 .../README                                         |   0
 .../README_kernel                                  |   0
 .../plot_these_seismograms_with_gnuplot.gnu        |   0
 .../block_mesh-anisotropic.py                      |   0
 .../block_mesh.py                                  |   0
 .../boundary_definition.py                         |   1 +
 .../cubit2specfem3d.py                             |   1 +
 ...hicknesses_to_use_to_define_the_CPML_layers.txt |   0
 .../picture_of_this_homogeneous_regular_mesh.png   | Bin
 ...ture_of_this_mesh_with_CPML_flags_in_colors.jpg | Bin
 .../plotall_comparison_seismograms.gnu             |   0
 .../process.sh                                     |  12 +-
 .../slices.txt                                     |   0
 ...his_regular_mesh_contains_36x36x16_elements.txt |   0
 .../DATA/CMTSOLUTION                               |   0
 .../DATA/FORCESOLUTION                             |   0
 .../DATA/Par_file                                  |   0
 .../DATA/STATIONS                                  |   0
 .../DATA/STATIONS_ADJOINT                          |   0
 .../HOWTO_run_this_example.txt                     |   0
 .../MESH-default/absorbing_cpml_file               |   0
 .../MESH-default/absorbing_surface_file_bottom     |   0
 .../MESH-default/absorbing_surface_file_xmax       |   0
 .../MESH-default/absorbing_surface_file_xmin       |   0
 .../MESH-default/absorbing_surface_file_ymax       |   0
 .../MESH-default/absorbing_surface_file_ymin       |   0
 .../free_or_absorbing_surface_file_zmax            |   0
 .../MESH-default/materials_file                    |   0
 .../MESH-default/mesh_file                         |   0
 .../MESH-default/nodes_coords_file                 |   0
 .../MESH-default/nummaterial_velocity_file         |   0
 .../README                                         |   0
 .../README_kernel                                  |   0
 .../plot_these_seismograms_with_gnuplot.gnu        |   0
 .../block_mesh-anisotropic.py                      |   0
 .../block_mesh.py                                  |   0
 .../boundary_definition.py                         |   1 +
 .../cubit2specfem3d.py                             |   1 +
 ...hicknesses_to_use_to_define_the_CPML_layers.txt |   0
 .../picture_of_this_homogeneous_regular_mesh.png   | Bin
 ...ture_of_this_mesh_with_CPML_flags_in_colors.jpg | Bin
 .../plotall_comparison_seismograms.gnu             |   0
 .../process.sh                                     |  12 +-
 .../slices.txt                                     |   0
 ...his_regular_mesh_contains_36x36x16_elements.txt |   0
 .../DATA/CMTSOLUTION                               |   0
 .../DATA/FORCESOLUTION                             |   0
 .../DATA/Par_file                                  |   0
 .../DATA/STATIONS                                  |   0
 .../DATA/STATIONS_ADJOINT                          |   0
 .../HOWTO_run_this_example.txt                     |   0
 .../MESH-default/absorbing_cpml_file               |   0
 .../MESH-default/absorbing_surface_file_bottom     |   0
 .../MESH-default/absorbing_surface_file_xmax       |   0
 .../MESH-default/absorbing_surface_file_xmin       |   0
 .../MESH-default/absorbing_surface_file_ymax       |   0
 .../MESH-default/absorbing_surface_file_ymin       |   0
 .../free_or_absorbing_surface_file_zmax            |   0
 .../MESH-default/materials_file                    |   0
 .../MESH-default/mesh_file                         |   0
 .../MESH-default/nodes_coords_file                 |   0
 .../MESH-default/nummaterial_velocity_file         |   0
 .../README                                         |   0
 .../README_kernel                                  |   0
 .../plot_these_seismograms_with_gnuplot.gnu        |   0
 .../block_mesh-anisotropic.py                      |   0
 .../block_mesh.py                                  |   0
 .../boundary_definition.py                         |   1 +
 .../cubit2specfem3d.py                             |   1 +
 ...hicknesses_to_use_to_define_the_CPML_layers.txt |   0
 .../picture_of_this_fluid_solid_regular_mesh.jpg   | Bin
 ...ture_of_this_mesh_with_CPML_flags_in_colors.jpg | Bin
 .../plotall_comparison_seismograms.gnu             |   0
 .../process.sh                                     |  12 +-
 .../slices.txt                                     |   0
 ...his_regular_mesh_contains_36x36x16_elements.txt |   0
 .../DATA/CMTSOLUTION                               |   0
 .../DATA/FORCESOLUTION                             |   0
 .../DATA/Par_file                                  |   0
 .../DATA/STATIONS                                  |   0
 .../DATA/STATIONS_ADJOINT                          |   0
 .../HOWTO_run_this_example.txt                     |   0
 .../MESH-default/absorbing_cpml_file               |   0
 .../MESH-default/absorbing_surface_file_bottom     |   0
 .../MESH-default/absorbing_surface_file_xmax       |   0
 .../MESH-default/absorbing_surface_file_xmin       |   0
 .../MESH-default/absorbing_surface_file_ymax       |   0
 .../MESH-default/absorbing_surface_file_ymin       |   0
 .../free_or_absorbing_surface_file_zmax            |   0
 .../MESH-default/materials_file                    |   0
 .../MESH-default/mesh_file                         |   0
 .../MESH-default/nodes_coords_file                 |   0
 .../MESH-default/nummaterial_velocity_file         |   0
 .../README                                         |   0
 .../README_kernel                                  |   0
 .../plot_these_seismograms_with_gnuplot.gnu        |   0
 .../block_mesh-anisotropic.py                      |   0
 .../block_mesh.py                                  |   0
 .../boundary_definition.py                         |   1 +
 .../cubit2specfem3d.py                             |   1 +
 ...hicknesses_to_use_to_define_the_CPML_layers.txt |   0
 .../picture_of_this_fluid_solid_regular_mesh.jpg   | Bin
 ...ture_of_this_mesh_with_CPML_flags_in_colors.jpg | Bin
 .../plotall_comparison_seismograms.gnu             |   0
 .../process.sh                                     |  12 +-
 .../slices.txt                                     |   0
 ...his_regular_mesh_contains_36x36x16_elements.txt |   0
 .../DATA/CMTSOLUTION                               |   0
 .../DATA/FORCESOLUTION                             |   0
 .../DATA/Par_file                                  |   0
 .../DATA/STATIONS                                  |   0
 .../DATA/STATIONS_ADJOINT                          |   0
 .../HOWTO_run_this_example.txt                     |   0
 .../MESH-default/absorbing_cpml_file               |   0
 .../MESH-default/absorbing_surface_file_bottom     |   0
 .../MESH-default/absorbing_surface_file_xmax       |   0
 .../MESH-default/absorbing_surface_file_xmin       |   0
 .../MESH-default/absorbing_surface_file_ymax       |   0
 .../MESH-default/absorbing_surface_file_ymin       |   0
 .../free_or_absorbing_surface_file_zmax            |   0
 .../MESH-default/materials_file                    |   0
 .../MESH-default/mesh_file                         |   0
 .../MESH-default/nodes_coords_file                 |   0
 .../MESH-default/nummaterial_velocity_file         |   0
 .../README                                         |   0
 .../README_kernel                                  |   0
 .../plot_these_seismograms_with_gnuplot.gnu        |   0
 .../block_mesh-anisotropic.py                      |   0
 .../block_mesh.py                                  |   0
 .../boundary_definition.py                         |   1 +
 .../cubit2specfem3d.py                             |   1 +
 ...hicknesses_to_use_to_define_the_CPML_layers.txt |   0
 .../picture_of_this_homogeneous_regular_mesh.png   | Bin
 ...ture_of_this_mesh_with_CPML_flags_in_colors.jpg | Bin
 .../plotall_comparison_seismograms.gnu             |   0
 .../process.sh                                     |  12 +-
 .../slices.txt                                     |   0
 ...his_regular_mesh_contains_36x36x16_elements.txt |   0
 .../DATA/CMTSOLUTION                               |   0
 .../DATA/FORCESOLUTION                             |   0
 .../DATA/Par_file                                  |   0
 .../DATA/STATIONS                                  |   0
 .../DATA/STATIONS_ADJOINT                          |   0
 .../HOWTO_run_this_example.txt                     |   0
 .../MESH-default/absorbing_cpml_file               |   0
 .../MESH-default/absorbing_surface_file_bottom     |   0
 .../MESH-default/absorbing_surface_file_xmax       |   0
 .../MESH-default/absorbing_surface_file_xmin       |   0
 .../MESH-default/absorbing_surface_file_ymax       |   0
 .../MESH-default/absorbing_surface_file_ymin       |   0
 .../free_or_absorbing_surface_file_zmax            |   0
 .../MESH-default/materials_file                    |   0
 .../MESH-default/mesh_file                         |   0
 .../MESH-default/nodes_coords_file                 |   0
 .../MESH-default/nummaterial_velocity_file         |   0
 .../README                                         |   0
 .../README_kernel                                  |   0
 .../plot_these_seismograms_with_gnuplot.gnu        |   0
 .../block_mesh-anisotropic.py                      |   0
 .../block_mesh.py                                  |   0
 .../boundary_definition.py                         |   1 +
 .../cubit2specfem3d.py                             |   1 +
 ...hicknesses_to_use_to_define_the_CPML_layers.txt |   0
 .../picture_of_this_homogeneous_regular_mesh.png   | Bin
 ...ture_of_this_mesh_with_CPML_flags_in_colors.jpg | Bin
 .../plotall_comparison_seismograms.gnu             |   0
 .../process.sh                                     |  12 +-
 .../slices.txt                                     |   0
 ...his_regular_mesh_contains_36x36x16_elements.txt |   0
 Mount_StHelens/boundary_definition.py              | 495 +------------
 Mount_StHelens/cubit2specfem3d.py                  | 777 +-------------------
 Mount_StHelens/run_boundary_definition.py          |  18 -
 Mount_StHelens/run_cubit2specfem3d.py              |  26 -
 fault_examples/README                              |  33 +
 .../splay_faults}/DATA/CMTSOLUTION                 |   0
 .../splay_faults}/DATA/FAULT_STATIONS              |   0
 .../splay_faults}/DATA/Par_file                    |   0
 .../splay_faults}/DATA/Par_file_faults.barrier     |   0
 .../splay_faults}/DATA/Par_file_faults.homogeneous |   0
 .../splay_faults}/DATA/STATIONS                    |   0
 .../splay_faults}/description/README               |   0
 .../post/Plot_snapshot_splay_faults.m              |   0
 .../splay_faults}/post/Plot_uz_surface.m           |   0
 .../splay_faults}/splay_faults.jpg                 | Bin
 .../splay_faults}/splay_faults.py                  |   0
 {tpv102 => fault_examples/tpv102}/DATA/CMTSOLUTION |   0
 .../tpv102}/DATA/FAULT_STATIONS                    |   0
 {tpv102 => fault_examples/tpv102}/DATA/Par_file    |   0
 .../tpv102}/DATA/Par_file_faults                   |   0
 {tpv102 => fault_examples/tpv102}/DATA/STATIONS    |   0
 {tpv102 => fault_examples/tpv102}/TPV102.jou       |   0
 {tpv102 => fault_examples/tpv102}/TPV102.py        |   0
 {tpv102 => fault_examples/tpv102}/description.pdf  | Bin
 {tpv103 => fault_examples/tpv103}/DATA/CMTSOLUTION |   0
 .../tpv103}/DATA/FAULT_STATIONS                    |   0
 {tpv103 => fault_examples/tpv103}/DATA/Par_file    |   0
 .../tpv103}/DATA/Par_file_faults                   |   0
 {tpv103 => fault_examples/tpv103}/DATA/STATIONS    |   0
 {tpv103 => fault_examples/tpv103}/TPV103.jou       |   0
 {tpv103 => fault_examples/tpv103}/TPV103.py        |   0
 {tpv103 => fault_examples/tpv103}/description.pdf  | Bin
 {tpv15 => fault_examples/tpv15}/DATA/CMTSOLUTION   |   0
 .../tpv15}/DATA/FAULT_STATIONS                     |   0
 {tpv15 => fault_examples/tpv15}/DATA/Par_file      |   0
 .../tpv15}/DATA/Par_file_faults                    |   0
 {tpv15 => fault_examples/tpv15}/DATA/STATIONS      |   0
 fault_examples/tpv15/absorbing_boundary.py         |   1 +
 fault_examples/tpv15/cubit2specfem3d.py            |   1 +
 .../description/TPV14_15_Description_v08.pdf       | Bin
 fault_examples/tpv15/save_fault_nodes_elements.py  |   1 +
 {tpv15 => fault_examples/tpv15}/tpv15.py           |   0
 {tpv15 => fault_examples/tpv15}/tpv15.tiff         | Bin
 {tpv15 => fault_examples/tpv15}/tpv15_inner.tiff   | Bin
 {tpv16 => fault_examples/tpv16}/DATA/CMTSOLUTION   |   0
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 {tpv16 => fault_examples/tpv16}/DATA/Par_file      |   0
 .../tpv16}/DATA/Par_file_faults                    |   0
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 {tpv16 => fault_examples/tpv16}/TPV16.jou          |   0
 {tpv16 => fault_examples/tpv16}/TPV16.py           |   0
 .../description/TPV16_17_Description_v03.pdf       | Bin
 {tpv16 => fault_examples/tpv16}/interp5GLL.m       |   0
 {tpv5 => fault_examples/tpv5}/DATA/CMTSOLUTION     |   0
 {tpv5 => fault_examples/tpv5}/DATA/FAULT_STATIONS  |   0
 {tpv5 => fault_examples/tpv5}/DATA/Par_file        |   0
 {tpv5 => fault_examples/tpv5}/DATA/Par_file_faults |   0
 {tpv5 => fault_examples/tpv5}/DATA/STATIONS        |   0
 fault_examples/tpv5/boundary_definition.py         |   1 +
 fault_examples/tpv5/cubit2specfem3d.py             |   1 +
 .../tpv5}/description/TPV5_1.pdf                   | Bin
 .../tpv5}/description/TPV5_2.pdf                   |   0
 .../tpv5}/description/TPV5_3.pdf                   |   0
 .../tpv5}/description/TPV5_4.pdf                   |   0
 .../tpv5}/description/TPV5_5.pdf                   | Bin
 fault_examples/tpv5/save_fault_nodes_elements.py   |   1 +
 {tpv5 => fault_examples/tpv5}/tpv5.py              |   0
 .../boundary_definition.py                         | 401 -----------
 .../cubit2specfem3d.py                             | 775 --------------------
 .../run_boundary_definition.py                     |  18 -
 .../run_cubit2specfem3d.py                         |  26 -
 .../boundary_definition.py                         | 401 -----------
 .../cubit2specfem3d.py                             | 775 --------------------
 .../run_boundary_definition.py                     |  18 -
 .../run_cubit2specfem3d.py                         |  26 -
 .../boundary_definition.py                         | 401 -----------
 .../cubit2specfem3d.py                             | 775 --------------------
 .../run_boundary_definition.py                     |  18 -
 .../run_cubit2specfem3d.py                         |  26 -
 .../boundary_definition.py                         | 401 -----------
 .../cubit2specfem3d.py                             | 775 --------------------
 .../run_boundary_definition.py                     |  18 -
 .../run_cubit2specfem3d.py                         |  26 -
 .../boundary_definition.py                         | 401 -----------
 .../cubit2specfem3d.py                             | 775 --------------------
 .../process.sh                                     |  89 ---
 .../run_boundary_definition.py                     |  18 -
 .../run_cubit2specfem3d.py                         |  26 -
 .../boundary_definition.py                         | 401 -----------
 .../cubit2specfem3d.py                             | 775 --------------------
 .../process.sh                                     |  89 ---
 .../run_boundary_definition.py                     |  18 -
 .../run_cubit2specfem3d.py                         |  26 -
 .../boundary_definition.py                         | 402 +----------
 .../cubit2specfem3d.py                             | 783 +--------------------
 .../run_boundary_definition.py                     |  18 -
 .../run_cubit2specfem3d.py                         |  26 -
 .../boundary_definition.py                         | 402 +----------
 .../cubit2specfem3d.py                             | 776 +-------------------
 .../run_boundary_definition.py                     |  18 -
 .../run_cubit2specfem3d.py                         |  26 -
 homogeneous_poroelastic/boundary_definition.py     | 379 +---------
 homogeneous_poroelastic/cubit2specfem3d.py         | 776 +-------------------
 homogeneous_poroelastic/run_boundary_definition.py |  18 -
 homogeneous_poroelastic/run_cubit2specfem3d.py     |  26 -
 layered_halfspace/boundary_definition.py           | 401 -----------
 layered_halfspace/cubit2specfem3d.py               | 775 --------------------
 meshfem3D_examples/README                          |  20 +
 tomographic_model/boundary_definition.py           | 402 +----------
 tomographic_model/cubit2specfem3d.py               | 776 +-------------------
 tomographic_model/run_boundary_definition.py       |  18 -
 tomographic_model/run_cubit2specfem3d.py           |  26 -
 view_all_parameter_files_to_modify_them.csh        |   2 +-
 waterlayered_halfspace/boundary_definition.py      | 402 +----------
 waterlayered_halfspace/cubit2specfem3d.py          | 776 +-------------------
 315 files changed, 130 insertions(+), 16065 deletions(-)

Diff suppressed because of size. To see it, use:

    git diff-tree --root --patch-with-stat --no-color --find-copies-harder --ignore-space-at-eol --cc 4fa715e6a73cc91df70ac187d390f1d918af3468


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