[cig-commits] [commit] devel: Merge pull request #136 from QuLogic/cleanup (50aa953)
cig_noreply at geodynamics.org
cig_noreply at geodynamics.org
Thu May 1 00:51:09 PDT 2014
Repository : ssh://geoshell/specfem3d
On branch : devel
Link : https://github.com/geodynamics/specfem3d/compare/cb32c88d6155d7974561a6f72fc17aea596e2c4d...50aa953c1db3f565d76415f5305410a529996b75
>---------------------------------------------------------------
commit 50aa953c1db3f565d76415f5305410a529996b75
Merge: cb32c88 129d6b0
Author: Dimitri Komatitsch <komatits at users.noreply.github.com>
Date: Thu May 1 09:50:02 2014 +0200
Merge pull request #136 from QuLogic/cleanup
Various small cleanups
>---------------------------------------------------------------
50aa953c1db3f565d76415f5305410a529996b75
Makefile.in | 6 +-
configure | 804 +---------
configure.ac | 64 -
flags.guess | 2 +-
setup/config.h.in | 4 -
setup/constants.h.in | 31 +-
.../create_movie_shakemap_AVS_DX_GMT.f90 | 252 +---
src/auxiliaries/rules.mk | 18 +-
src/auxiliaries/save_external_bin_m_up.f90 | 28 +-
src/check_mesh_quality_CUBIT_Abaqus/constants.h | 38 -
src/cuda/compute_stacey_viscoelastic_cuda.cu | 4 -
src/cuda/mesh_constants_cuda.h | 9 +-
src/cuda/prepare_constants_cuda.h | 9 +-
src/cuda/specfem3D_gpu_cuda_method_stubs.c | 44 +-
src/decompose_mesh/constants_decompose_mesh.h | 41 -
src/decompose_mesh/decompose_mesh.F90 | 4 +-
src/decompose_mesh/fault_scotch.f90 | 207 +--
src/decompose_mesh/part_decompose_mesh.f90 | 334 +----
src/decompose_mesh/rules.mk | 19 +-
src/generate_databases/create_mass_matrices.f90 | 16 +-
src/generate_databases/create_regions_mesh.f90 | 2 +-
.../fault_generate_databases.f90 | 39 +-
src/generate_databases/generate_databases.f90 | 5 +-
.../generate_databases_adios_stubs.f90 | 26 +
src/generate_databases/generate_databases_par.f90 | 2 +-
src/generate_databases/get_MPI.f90 | 28 +-
src/generate_databases/get_coupling_surfaces.f90 | 6 -
src/generate_databases/get_global.f90 | 305 ----
src/generate_databases/model_1d_prem.f90 | 28 +-
src/generate_databases/model_1d_socal.f90 | 32 +-
src/generate_databases/model_external_values.f90 | 28 +-
src/generate_databases/model_gll_adios.F90 | 3 +-
src/generate_databases/model_ipati_adios.F90 | 3 +-
src/generate_databases/model_salton_trough.f90 | 12 +-
src/generate_databases/model_tomography.f90 | 7 +-
.../pml_set_local_dampingcoeff.f90 | 4 +-
src/generate_databases/read_partition_files.f90 | 1 -
.../read_partition_files_adios.F90 | 3 +-
src/generate_databases/rules.mk | 24 +-
src/meshfem3D/check_mesh_quality.f90 | 7 -
src/meshfem3D/create_name_database.f90 | 49 -
src/meshfem3D/create_regions_mesh.f90 | 13 +-
src/meshfem3D/create_visual_files.f90 | 2 -
src/meshfem3D/define_subregions.f90 | 1 -
src/meshfem3D/define_superbrick.f90 | 12 +-
src/meshfem3D/get_MPI_cutplanes_eta.f90 | 64 +-
src/meshfem3D/get_MPI_cutplanes_xi.f90 | 68 +-
src/meshfem3D/get_global.f90 | 244 ----
src/meshfem3D/get_value_parameters.f90 | 84 --
src/meshfem3D/meshfem3D.f90 | 25 +-
src/meshfem3D/meshfem3D_adios_stubs.f90 | 26 +
src/meshfem3D/read_mesh_parameter_file.f90 | 135 +-
src/meshfem3D/read_value_mesh_parameters.f90 | 76 +-
src/meshfem3D/rules.mk | 21 +-
src/meshfem3D/save_databases.f90 | 4 -
src/shared/adios_manager_stubs.f90 | 4 +-
src/shared/check_mesh_resolution.f90 | 8 +-
src/shared/create_name_database.f90 | 7 +-
src/shared/create_serial_name_database.f90 | 5 +-
src/shared/exit_mpi.f90 | 4 +-
src/shared/force_ftz.c | 44 +-
src/shared/get_attenuation_model.f90 | 90 +-
src/shared/get_cmt.f90 | 4 +-
src/shared/get_force.f90 | 41 +-
src/shared/get_global.f90 | 128 ++
src/shared/get_jacobian_boundaries.f90 | 182 +--
src/shared/get_shape2D.f90 | 30 +-
src/shared/get_shape3D.f90 | 546 +++----
src/shared/get_value_parameters.f90 | 99 --
src/shared/gll_library.f90 | 118 +-
src/shared/hex_nodes.f90 | 2 +-
src/shared/parallel.f90 | 32 +-
src/shared/param_reader.c | 59 +-
src/shared/prepare_assemble_MPI.f90 | 336 ++---
src/shared/read_parameter_file.f90 | 343 +++--
src/shared/read_value_parameters.f90 | 199 +--
src/shared/rules.mk | 22 +-
src/shared/safe_alloc_mod.f90 | 27 +-
src/shared/save_header_file.f90 | 10 +-
src/shared/sort_array_coordinates.f90 | 288 ++--
src/shared/utm_geo.f90 | 156 +-
src/shared/write_VTK_data.f90 | 11 -
src/shared/write_c_binary.c | 123 +-
src/specfem3D/assemble_MPI_vector.f90 | 262 +---
src/specfem3D/check_stability.f90 | 2 +-
src/specfem3D/compute_add_sources_acoustic.f90 | 521 ++++---
src/specfem3D/compute_add_sources_poroelastic.f90 | 208 +--
src/specfem3D/compute_add_sources_viscoelastic.f90 | 537 ++++---
src/specfem3D/compute_arrays_source.f90 | 83 --
src/specfem3D/compute_coupling_acoustic_el.f90 | 56 +-
src/specfem3D/compute_coupling_poroelastic_el.f90 | 593 ++++----
src/specfem3D/compute_coupling_viscoelastic_ac.f90 | 2 +-
src/specfem3D/compute_coupling_viscoelastic_po.f90 | 577 ++++----
src/specfem3D/compute_forces_acoustic_Dev.F90 | 136 +-
.../compute_forces_acoustic_calling_routine.f90 | 14 +-
src/specfem3D/compute_forces_acoustic_noDev.f90 | 111 +-
src/specfem3D/compute_forces_poro_fluid_part.f90 | 719 +++++----
src/specfem3D/compute_forces_poro_solid_part.f90 | 704 +++++----
.../compute_forces_poroelastic_calling_routine.f90 | 262 ++--
src/specfem3D/compute_forces_viscoelastic_Dev.F90 | 1528 ++++++++++----------
...compute_forces_viscoelastic_calling_routine.F90 | 114 +-
.../compute_forces_viscoelastic_noDev.f90 | 1079 +++++++-------
src/specfem3D/compute_kernels.f90 | 265 ++--
src/specfem3D/compute_stacey_acoustic.f90 | 32 +-
src/specfem3D/compute_stacey_poroelastic.f90 | 188 ++-
src/specfem3D/compute_stacey_viscoelastic.f90 | 202 ++-
src/specfem3D/compute_total_energy.f90 | 354 ++---
src/specfem3D/create_color_image.f90 | 8 +-
src/specfem3D/fault_solver_common.f90 | 45 +-
src/specfem3D/fault_solver_dynamic.f90 | 106 +-
src/specfem3D/fault_solver_kinematic.f90 | 51 +-
src/specfem3D/finalize_simulation.f90 | 172 +--
src/specfem3D/gravity_perturbation.f90 | 286 ++--
src/specfem3D/initialize_simulation.f90 | 149 +-
src/specfem3D/iterate_time.F90 | 12 +-
src/specfem3D/locate_receivers.f90 | 119 +-
src/specfem3D/locate_source.f90 | 43 +-
src/specfem3D/noise_tomography.f90 | 351 ++---
src/specfem3D/pml_allocate_arrays.f90 | 450 +++---
src/specfem3D/pml_compute_accel_contribution.f90 | 1064 +++++++-------
src/specfem3D/pml_compute_memory_variables.f90 | 1111 +++++++-------
src/specfem3D/pml_output_VTKs.f90 | 12 +-
src/specfem3D/prepare_timerun.F90 | 245 ++--
src/specfem3D/read_forward_arrays_adios.F90 | 3 +-
src/specfem3D/read_mesh_databases.F90 | 372 +++--
src/specfem3D/read_mesh_databases_adios.F90 | 286 ++--
src/specfem3D/rules.mk | 22 +-
src/specfem3D/save_adjoint_kernels.f90 | 100 +-
src/specfem3D/setup_GLL_points.f90 | 16 +-
src/specfem3D/setup_movie_meshes.f90 | 74 +-
src/specfem3D/setup_sources_receivers.f90 | 300 ++--
src/specfem3D/specfem3D.f90 | 2 -
src/specfem3D/specfem3D_adios_stubs.f90 | 26 +
src/specfem3D/specfem3D_par.f90 | 6 +-
src/specfem3D/write_movie_output.f90 | 417 +++---
src/specfem3D/write_output_ASCII.f90 | 36 +-
src/specfem3D/write_output_SU.f90 | 32 +-
src/specfem3D/write_seismograms.f90 | 79 +-
todo_list_please_dont_remove.txt | 1309 -----------------
139 files changed, 8945 insertions(+), 13149 deletions(-)
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