[cig-commits] [commit] master: Updated script for visualization chapter figures. (44550de)

[cig_noreply at geodynamics.org]

Repository : https://github.com/geodynamics/cigma

On branch  : master
Link       : https://github.com/geodynamics/cigma/compare/65c02138d3ae8b87c088cc14fe4f98e21e3f0805...a26f592c25c89a40622404999ba1effcdf6df9e3

>---------------------------------------------------------------

commit 44550de007a6cbef165045596bbf40fd084bc7be
Author: Luis Armendariz <luis>
Date:   Wed Feb 6 21:06:08 2008 +0000

    Updated script for visualization chapter figures.


>---------------------------------------------------------------

44550de007a6cbef165045596bbf40fd084bc7be
 figures/rsng-p0500-g0500.sh | 34 +++++++++++++++++++++++++---------
 figures/ssng-p0250-g0500.sh | 12 +++++++++---
 2 files changed, 34 insertions(+), 12 deletions(-)

diff --git a/figures/rsng-p0500-g0500.sh b/figures/rsng-p0500-g0500.sh
index 65b3b29..8dec1c8 100755
--- a/figures/rsng-p0500-g0500.sh
+++ b/figures/rsng-p0500-g0500.sh
@@ -1,33 +1,41 @@
 #!/bin/bash
 
 bm=bmrsnog
-bmfile=$bm.h5
+bmfile=$HOME/benchmarks/$bm.h5
 prefix=rsng-p0500-g0500
 
 #########
 
 echo "---------------------------------------------------------------"
 var=variables/displacement/step00000
-cigma-compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var          \
+cigma compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var          \
               --second=$bmfile:/geofest/${bm}_tet4_0500m_A/$var      \
+              --first-mesh=$bmfile:/mesh/${bm}_tet4_0500m            \
+              --second-mesh=$bmfile:/mesh/${bm}_tet4_0500m           \
               --output=$prefix.disp-000.vtk
 
 echo "---------------------------------------------------------------"
 var=variables/displacement/step00010
-cigma-compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var          \
+cigma compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var          \
               --second=$bmfile:/geofest/${bm}_tet4_0500m_A/$var      \
+              --first-mesh=$bmfile:/mesh/${bm}_tet4_0500m            \
+              --second-mesh=$bmfile:/mesh/${bm}_tet4_0500m           \
               --output=$prefix.disp-010.vtk
 
 echo "---------------------------------------------------------------"
 var=variables/displacement/step00050
-cigma-compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var          \
+cigma compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var          \
               --second=$bmfile:/geofest/${bm}_tet4_0500m_A/$var      \
+              --first-mesh=$bmfile:/mesh/${bm}_tet4_0500m            \
+              --second-mesh=$bmfile:/mesh/${bm}_tet4_0500m           \
               --output=$prefix.disp-050.vtk
 
 echo "---------------------------------------------------------------"
 var=variables/displacement/step00100
-cigma-compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var          \
+cigma compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var          \
               --second=$bmfile:/geofest/${bm}_tet4_0500m_A/$var      \
+              --first-mesh=$bmfile:/mesh/${bm}_tet4_0500m            \
+              --second-mesh=$bmfile:/mesh/${bm}_tet4_0500m           \
               --output=$prefix.disp-100.vtk
 
 #########
@@ -36,31 +44,39 @@ echo "---------------------------------------------------------------"
 t=step00000
 var1=variables/velocity/$t
 var2=variables/del_displacement/$t
-cigma-compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var1         \
+cigma compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var1         \
               --second=$bmfile:/geofest/${bm}_tet4_0500m_A/$var2     \
+              --first-mesh=$bmfile:/mesh/${bm}_tet4_0500m            \
+              --second-mesh=$bmfile:/mesh/${bm}_tet4_0500m           \
               --output=$prefix.velo-000.vtk
 
 echo "---------------------------------------------------------------"
 t=step00010
 var1=variables/velocity/$t
 var2=variables/del_displacement/$t
-cigma-compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var1         \
+cigma compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var1         \
               --second=$bmfile:/geofest/${bm}_tet4_0500m_A/$var2     \
+              --first-mesh=$bmfile:/mesh/${bm}_tet4_0500m            \
+              --second-mesh=$bmfile:/mesh/${bm}_tet4_0500m           \
               --output=$prefix.velo-010.vtk
 
 echo "---------------------------------------------------------------"
 t=step00050
 var1=variables/velocity/$t
 var2=variables/del_displacement/$t
-cigma-compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var1         \
+cigma compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var1         \
               --second=$bmfile:/geofest/${bm}_tet4_0500m_A/$var2     \
+              --first-mesh=$bmfile:/mesh/${bm}_tet4_0500m            \
+              --second-mesh=$bmfile:/mesh/${bm}_tet4_0500m           \
               --output=$prefix.velo-050.vtk
 
 echo "---------------------------------------------------------------"
 t=step00100
 var1=variables/velocity/$t
 var2=variables/del_displacement/$t
-cigma-compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var1         \
+cigma compare --first=$bmfile:/pylith/${bm}_tet4_0500m/$var1         \
               --second=$bmfile:/geofest/${bm}_tet4_0500m_A/$var2     \
+              --first-mesh=$bmfile:/mesh/${bm}_tet4_0500m            \
+              --second-mesh=$bmfile:/mesh/${bm}_tet4_0500m           \
               --output=$prefix.velo-100.vtk
 
diff --git a/figures/ssng-p0250-g0500.sh b/figures/ssng-p0250-g0500.sh
index 4fe09fd..a9fed0c 100755
--- a/figures/ssng-p0250-g0500.sh
+++ b/figures/ssng-p0250-g0500.sh
@@ -1,15 +1,18 @@
 #!/bin/bash
 
 bm=bmssnog
-bmfile=$bm.h5
+bmfile=$HOME/benchmarks/$bm.h5
 prefix=ssng-p0250-g0500
 
 #########
 
 echo "---------------------------------------------"
 var=variables/displacement/step00000
-cigma-compare --first=$bmfile:/pylith/${bm}_tet4_0250m/$var     \
+cigma compare --first=$bmfile:/pylith/${bm}_tet4_0250m/$var     \
               --second=$bmfile:/geofest/${bm}_tet4_0500m/$var   \
+              --first-mesh=$bmfile:/mesh/${bm}_tet4_0250m       \
+              --second-mesh=$bmfile:/mesh/${bm}_tet4_0500m      \
+              --verbose --output-frequency=10000                \
               --output=$prefix.disp-000.vtk
 
 
@@ -19,7 +22,10 @@ echo "---------------------------------------------"
 t=step00000
 var1=variables/velocity/$t
 var2=variables/del_displacement/$t
-cigma-compare --first=$bmfile:/pylith/${bm}_tet4_0250m/$var1    \
+cigma compare --first=$bmfile:/pylith/${bm}_tet4_0250m/$var1    \
               --second=$bmfile:/geofest/${bm}_tet4_0500m/$var2  \
+              --first-mesh=$bmfile:/mesh/${bm}_tet4_0250m       \
+              --second-mesh=$bmfile:/mesh/${bm}_tet4_0500m      \
+              --verbose --output-frequency=10000                \
               --output=$prefix.velo-000.vtk