[cig-commits] [commit] next's head updated: Merge branch 'knepley/fix-faults-parallel' into next (49e8274)

[cig_noreply at geodynamics.org]

Repository : https://github.com/geodynamics/pylith

Branch 'next' now includes:

     76f389f Merge branch 'knepley/fix-parallel-mult-faults'
     80029c3 Spell check release notes.
     1b3d6d3 Added more notes to release checklist.
     310b140 Added number of procs (nodes) setting.
     5afa9d0 Fixed bug so only proc 0 creates output dir.
     422d933 Use optimized integrators in bar_shearwave tri3 and tet4 examples.
     7947ba0 Merge branch 'master' into knepley/fix-faults-parallel
     4dcce72 Faults: Add Lagrange edges directly rather than using the cohesive cells - This catches edges that are present in only cohesive cells with clamped edges on one proc, but not on another
     cb2b2b6 Fault: Fixes for new way of handling hybrid edges - Note that allowing negative v_fault causes a crash
     fbb1d73 Faults: New treatment of fault halo - The halo cohesive cells are included in the fault label - In _cohesiveVertices[], cohesive edges which are clamped are given negative ids - Cohesive edges with negative ids are ignored in calculation
     0078990 Updated embedded fault unit tests for change in treatment of fault halo.
     3024a26 Faults: Create a "clamped" label in the fault mesh that contains unsplit vertices
     1cbca9c Fault : Correct default value
     3e60317 Removed obsolete unused full-scale test files.
     4449b1a Add number of processes to application info output.
     96a279b Improve debugging output in full-scale tests for fault stuff.
     31e8b9d Ignore clamped edges in various operations.
     5276eb6 Update full-scale tests for inclusion of fault halo.
     ffea5cb Update unit tests for inclusion of fault halo.
     1169098 Ignore clamped vertices when setting slip.
     a4763ff Turn on logging in application to show number of processes.
     8c4d50b Skip clamped vertices in FaultCohesiveDyn and FaultCohesiveImpulses.
     d3610af Fault: Small fix for fault halo
     71bd4cb Small code cleanup.
     96a97b5 Faults: Provide the label marking fault halo vertices to DMPlexLabelCohesiveComplete()
     ce91c33 Fix bug in checking topology for submeshes.
     ce4ce38 Fix output message (only print if actually refining mesh).
     c7f70ce Add label for fault edge nodeset.
     cba3ba8 Turn on journal output for debugging.
     01ad665 Faults: Fix the fault boundary label
     a1fd448 Update test data for removal of fault halo.
     91a41ca Fault: Removed faultBoundary, which was unused
     8db09a4 Faults: Removed clamped vertex kludge, since now we fix the fault boundary
     9da3efc Remove some obsolete (not used) code.
     4005988 Update 2-D adjust topology tests for embedded faults to use fault edge.
     8f8fd96 Updated 2-D fault cohesive kinematic tests for including fault edge.
     dd66bb3 Turn off debugging output.
     0b52519 Updated data for tri3 full-scale test with embedded fault w/edge.
     da0e53b Updated 2-D tri3 refinement w/embedded fault case.
     583ad9c Enable fault edge in 3d/tet4 embedded fault test.
     6346474 Faults: Removed the creation of the fault boundary mesh - Also removed non-interpolated code for fault creation
     df86522 Created unit test for adjusting topology for hex8 cells w/embedded fault.
     b9115fe Added unit test for adjusting topology of tet4 cells w/embedded fault.
     c908f59 Use nonzero tolerance for detecting inability to determine face orientation with respect to up direction.
     8789e1e Fix fault edge group.
     def84fe Fault Test: Fixed data for Hex8j - Fault cells have 5 vertices since 3 are clamped per cell - Fault label includes split points
     39a68e3 Updated test data for adjusting topology for tet4k (embedded fault).
     30d2fd9 Updated tet4k mesh file.
     4e8af6a Remove binary Exodus file (keep ASCII mesh file).
     637a3ea Updated tests_auto/3d/hex8 embedded fault settings (fault edge).
     4f144dd Faults: Fix completion of fault boundary label
     8f21109 Faults: Added missing destroy
     9983318 Update test data for 3d/tet4/TestShearDispNoSlipRefine (may need another update).
     97d95cf Faults: Fixed checking for cross edge - I needed to throw out non-fault edges when checking the support size
     59e0108 Update mesh info for 3d/tet4 embedded fault full-scale tests.
     8d9d4e6 Turn off journal output in full-scale test.
     5b27f10 Turn off more debugging output (PETSc).
     49e8274 Merge branch 'knepley/fix-faults-parallel' into next