[cig-commits] [commit] master's head updated: Merge remote-tracking branch 'origin/devel' (1300e56)

[cig_noreply at geodynamics.org]

Repository : https://github.com/geodynamics/specfem3d_globe

Branch 'master' now includes:

     b7062d6 updates gpu code routines for forward and adjoint runs
     afc569e sorts station list in output_solver.txt by epicentral distance
     a44a8e9 updates output format in create_movie_GMT_global.f90 to avoid cray compiler separator issues; rewrites if-elseif as select-case statement in write_seismograms()
     2daa4d3 updates reading in CMTSOLUTION and station files to be less stringent about formatting and spacing
     8c5d25d adds scalar moment and moment magnitude information to source output
     06d6397 Removed direct usage of BOAST state
     6994fe6 Added function declarations
     760ea4d Prevent possible out-of-bounds write.
     d9d5568 Fix unused variable warning without CEM.
     31c4e16 Hard fail if resolution is set to invalid value.
     ca6bfa6 Stop if doubling elements cannot be determined.
     2d2cce8 Fix a couple type-conversion warnings.
     d4ead38 Fix some set-but-unused variables.
     b9d571a Fix an unnecessarily inverted condition.
     2afaf00 Move force_ftz to the solver directory.
     d8c9c45 Move make_gravity into specfem3D directory.
     cc79a55 Remove extra shared object from mesher compile.
     c53c771 Re-factor band_instrument_code to be clearer.
     6b339cf Remove euler_angles from specfem3d compile.
     9875814 Remove memory_eval from specfem3D.
     76d7cc9 Remove unnecessary consistency check.
     9539187 Print solver initialization errors to stdout.
     c90b60c Fix intent of get_global arguments.
     01e6b37 Fix a couple minor typos.
     300803e updates configuration and m4/ scripts
     0aa2df0 Fixed a small bug with CEM compilation.
     d2dff12 updates user output for undo_attenuation buffers
     753122f merges with upstream version
     6034d34 updates gpu stubs for calling prepare_lddrk_device() routine
     c6e8e9a added explanations from Jeroen about the steps to follow when using PARTIAL_PHYS_DISPERSION_ONLY instead of UNDO_ATTENUATION
     44c2c95 Merge branch 'static-analysis' of github.com:QuLogic/specfem3d_globe into devel
     957c705 updates geocentric_2_geographic_dble() routine to account for new flattening constant
     9df6dd5 bug fix for gpu anisotropic kernels; bug fix in strain product on gpus; adds output directory check in kernels.rb and updates generated files in kernels.gen/ directory
     65bcff0 updates configuration to take new m4/ cuda checks
     8087d34 clarified the way to define memory sizes for UNDO_ATTENUATION on Titan at Oak Ridge
     4cf4cfc allow the code to use up to 100% of the memory instead of 92% when using UNDO_ATTENUATION on GPUs because UNDO_ATTENUATION buffers are then stored on another machine (the host) instead of on the GPU itself
     301191e added Jeroen's second set of explanations about how to use PARTIAL_PHYS_DISPERSION_ONLY right to the users manual.
     2b030e9 Safe compilation of solver with CEM workflow netcdf kernel output
     f90eb91 Added parallel netcdf kernel write for CEM.
     782728a Added coordinate netcdf write.
     8a794a6 better compiler options for Portland pgfortran
     edc57b9 Merge pull request #241 from komatits/devel
     7a3a2bc revert pgfortan to pgf90 (although in principle pgfortan is the standard name these days, but it seems to break BuildBot)
     afaf5b7 got rid of compiler option -Mipa=fast,inline for pgf90 because it creates problems with some older versions of that compiler
     7ff74ed changed pgf90 back to pgfortran, since the problem detected by BuildBot was not coming from that
     c97050b Merge pull request #243 from komatits/devel
     7e52bb1 adds convert_model_file_adios.f90 to src/tomography/; updates make files
     7c95636 adds model interpolation tool to src/tomography
     c25bd40 adds tomography tools for summation,smoothing and model updates
     ed24ef0 updates Makefile.in to add model update executables to  make help informations
     46435b2 added missing headers
     af7e4b9 removed useless white spaces using a script
     4be5f11 Merge pull request #246 from komatits/devel
     7a6acc2 updates tomography tools to use common subroutines
     5958372 renames constants_tomography.h to constants_tomography.h.in to allow out-of-source builds; small updates in tomo rules and files
     efc1238 updates tomography tool routines; adds MAX_STRING_LEN parameter for strings
     ca6ec64 updates configuration and m4/ scripts (fixes configuration with CUDA and intel ifort compilers)
     60d065d updates smoothing tool and adds mesh geometry to values_from_mesher.h
     12a1de4 fixes parameter output to values_from_mesher.h file for mesh geometry (avoids line breaks)
     72d3705 updates interpolation tool and rules.mk in src/tomography
     7e26ef7 adds difference tool to src/tomography
     ccdee4f Textures no longer appear in function declaration when not needed
     92e5c5e remove texture definition when not used
     eb0800a remove duplicated function
     2db7be0 Protect multiline macro function definitions
     ad8193f finish removing unused textures from kernels calls
     c1bfb4d revert src/gpu/initialize_gpu.c to original state
     71b75c4 fix compilation bugs (cudacc stricter than gccwq)
     eecbe6b removed white spaces
     1956d2e Adds initilization for backward trace arrays
     0d9b194 updates interpolation tool; removes redundant asdf helper files; adds new flush_system.f90 file; renames long function names
     70fbc91 added see_also_README_inversion_package_list_of_things_to_do_in_the_SPECFEM3D_package.txt
     1300e56 Merge remote-tracking branch 'origin/devel'