Wed Nov 5 15:43:58 PST 2014

Repository : https://github.com/geodynamics/pylith

On branches: baagaard/add-release-2.0.3,baagaard/add-release-2.1.0,baagaard/dynrup-new-lagrange,baagaard/feature-output-station-names,baagaard/feature-progress-monitor,baagaard/fix-custom-faultpc,baagaard/fix-error-messages,baagaard/fix-faults-intersect,baagaard/fix-friction-initial-state,baagaard/update-autoconf,knepley/feature-petsc-fe,knepley/upgrade-petsc-3.5,knepley/upgrade-petsc-master,maint,master,next,willic3/fix-plasticity
Link       : https://github.com/geodynamics/pylith/compare/f33c75b19fd60eedb2a3405db76a1fee333bb1d7...5b6d812b1612809fea3bd331c4e5af98c25a536a

>---------------------------------------------------------------

commit ab8c3c6ba62f74f46f744f39e77535113f77df3c
Merge: 3dde946 875d67f
Author: Brad Aagaard <baagaard at usgs.gov>
Date:   Wed Jun 25 20:48:00 2014 -0700

    Merge branch 'baagaard/add-examples-debugging'
    
    * baagaard/add-examples-debugging:
      Added README to examples/debugging.
      Added debugging to examples Makefile. Updated filenames in debugging Makefile.
      Accidentally removed errors.
      Finished setting up files with error and correct files. Moved correct files to correct directory.
      Add more errors into mat_elastic and step02.
      Small adjustments to errors.
      Introduce some errors into spatialdb file.
      Cleanup some error messages.
      Added files for examples/debugging.
      Started work on debugging examples.
      Small improvements to 2-D gravity example.
      Finished setting up gravity example. Need to have Brad and Matt test it.
      Removed spatial database files that are created by python script.
      Delete log files I didn't mean to include.
      Added README.
      Added initial version of 2D gravity example


>---------------------------------------------------------------

ab8c3c6ba62f74f46f744f39e77535113f77df3c
 configure.ac                                       |    3 +
 examples/2d/Makefile.am                            |    3 +-
 .../{greensfns/strikeslip => gravity}/Makefile.am  |   22 +-
 examples/2d/gravity/README                         |   43 +
 .../nonplanar => examples/2d/gravity}/geometry.jou |   56 +-
 examples/2d/gravity/grav_stress-initial.spatialdb  |   19 +
 examples/2d/gravity/grav_stress.cfg                |   53 +
 examples/2d/gravity/grav_stress_finite_is2.cfg     |   78 +
 examples/2d/gravity/grav_stress_infin_is1.cfg      |   70 +
 examples/2d/gravity/grav_stress_infin_is2.cfg      |   73 +
 .../mat_elastic.spatialdb}                         |    2 +-
 .../mat_maxwell.spatialdb}                         |    2 +-
 .../strikeslip/mesh_tri3.jou => gravity/mesh.jou}  |   37 +-
 .../2d/gravity/output}/Makefile.am                 |    3 +-
 examples/2d/gravity/output/deform_view.pvsm        | 6191 ++++++++++++++++++++
 examples/2d/{subduction => gravity}/pylithapp.cfg  |  147 +-
 examples/2d/gravity/stress2spatialdb.py            |   75 +
 examples/Makefile.am                               |    1 +
 .../greensfns/reverse => debugging}/Makefile.am    |   28 +-
 examples/debugging/README                          |    8 +
 .../correct}/mat_elastic.spatialdb                 |    0
 .../{3d/hex8 => debugging/correct}/pylithapp.cfg   |   52 +-
 examples/debugging/correct/step01.cfg              |  108 +
 .../step03.cfg => debugging/correct/step02.cfg}    |  103 +-
 .../step11.cfg => debugging/correct/step03.cfg}    |   93 +-
 .../cubit_cellsize => debugging}/geometry.jou      |   50 +-
 .../spatialdb => debugging}/mat_elastic.spatialdb  |    4 +-
 .../spatialdb => debugging}/mat_maxwell.spatialdb  |    0
 examples/debugging/mesh.exo                        |  Bin 0 -> 30752 bytes
 .../debugging/mesh.jou                             |  100 +-
 examples/{3d/hex8 => debugging}/pylithapp.cfg      |   81 +-
 examples/debugging/step01.cfg                      |  108 +
 .../{3d/hex8/step03.cfg => debugging/step02.cfg}   |  103 +-
 .../{3d/hex8/step11.cfg => debugging/step03.cfg}   |   94 +-
 libsrc/pylith/bc/AbsorbingDampers.cc               |    4 +-
 libsrc/pylith/bc/BCIntegratorSubMesh.cc            |    6 +-
 libsrc/pylith/bc/DirichletBC.cc                    |   12 +-
 libsrc/pylith/bc/DirichletBoundary.cc              |    2 +-
 libsrc/pylith/bc/Neumann.cc                        |    8 +-
 libsrc/pylith/bc/TimeDependent.cc                  |    2 +-
 libsrc/pylith/bc/TimeDependentPoints.cc            |   14 +-
 libsrc/pylith/faults/BruneSlipFn.cc                |    8 +-
 libsrc/pylith/faults/ConstRateSlipFn.cc            |    6 +-
 43 files changed, 7334 insertions(+), 538 deletions(-)