[cig-commits] [commit] devel,master: done adding the new GPU and ADIOS parameters into all the Parfiles for the EXAMPLES; also fixed all the STATIONS files that were still using the old format (with the number of stations on the first line of the file) (0bc3c36)
cig_noreply at geodynamics.org
cig_noreply at geodynamics.org
Thu Nov 6 08:07:58 PST 2014
Repository : https://github.com/geodynamics/specfem3d_globe
On branches: devel,master
Link : https://github.com/geodynamics/specfem3d_globe/compare/bc58e579b3b0838a0968725a076f5904845437ca...be63f20cbb6f462104e949894dbe205d2398cd7f
>---------------------------------------------------------------
commit 0bc3c36a18fa81a9835a6f5370929a5cb0ed82df
Author: Dimitri Komatitsch <komatitsch at lma.cnrs-mrs.fr>
Date: Fri Sep 27 15:28:06 2013 +0000
done adding the new GPU and ADIOS parameters into all the Parfiles for the EXAMPLES;
also fixed all the STATIONS files that were still using the old format (with the number of stations on the first line of the file)
>---------------------------------------------------------------
0bc3c36a18fa81a9835a6f5370929a5cb0ed82df
.../SEMD/DATA/STATIONS | 1 -
benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/STATIONS | 1 -
.../prem_ani_noocean_Q_Cowling_Vanuatu/SEMD/DATA/STATIONS | 1 -
benchmarks/prem_ani_noocean_Q_Cowling_Vanuatu/STATIONS | 1 -
.../prem_iso_noocean_Q_Cowling_Vanuatu/SEMD/DATA/STATIONS | 1 -
benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/STATIONS | 1 -
noise_examples/test_global/Par_file_NOISE_1_attenuation | 13 +++++++++++++
noise_examples/test_global/Par_file_NOISE_1_noattenuation | 13 +++++++++++++
noise_examples/test_global/Par_file_NOISE_2_attenuation | 13 +++++++++++++
noise_examples/test_global/Par_file_NOISE_2_noattenuation | 13 +++++++++++++
noise_examples/test_global/Par_file_NOISE_3_noattenuation | 13 +++++++++++++
noise_examples/test_regional/Par_file_NOISE_1_attenuation | 13 +++++++++++++
noise_examples/test_regional/Par_file_NOISE_1_noattenuation | 13 +++++++++++++
noise_examples/test_regional/Par_file_NOISE_2_attenuation | 13 +++++++++++++
noise_examples/test_regional/Par_file_NOISE_2_noattenuation | 13 +++++++++++++
noise_examples/test_regional/Par_file_NOISE_3_noattenuation | 13 +++++++++++++
vi_all_Par_files_to_add_parameters_to_them.bash | 3 +--
17 files changed, 131 insertions(+), 8 deletions(-)
diff --git a/benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/SEMD/DATA/STATIONS b/benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/SEMD/DATA/STATIONS
index 1af5636..059882c 100644
--- a/benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/SEMD/DATA/STATIONS
+++ b/benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/SEMD/DATA/STATIONS
@@ -1,4 +1,3 @@
-35
BBSR IU +32.371200 -064.696200 6.0 0.0
SAML IU -08.948800 -063.183200 130.0 0.0
SFJD IU +66.995999 -050.621500 328.0 0.0
diff --git a/benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/STATIONS b/benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/STATIONS
index 1af5636..059882c 100644
--- a/benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/STATIONS
+++ b/benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/STATIONS
@@ -1,4 +1,3 @@
-35
BBSR IU +32.371200 -064.696200 6.0 0.0
SAML IU -08.948800 -063.183200 130.0 0.0
SFJD IU +66.995999 -050.621500 328.0 0.0
diff --git a/benchmarks/prem_ani_noocean_Q_Cowling_Vanuatu/SEMD/DATA/STATIONS b/benchmarks/prem_ani_noocean_Q_Cowling_Vanuatu/SEMD/DATA/STATIONS
index 1af5636..059882c 100644
--- a/benchmarks/prem_ani_noocean_Q_Cowling_Vanuatu/SEMD/DATA/STATIONS
+++ b/benchmarks/prem_ani_noocean_Q_Cowling_Vanuatu/SEMD/DATA/STATIONS
@@ -1,4 +1,3 @@
-35
BBSR IU +32.371200 -064.696200 6.0 0.0
SAML IU -08.948800 -063.183200 130.0 0.0
SFJD IU +66.995999 -050.621500 328.0 0.0
diff --git a/benchmarks/prem_ani_noocean_Q_Cowling_Vanuatu/STATIONS b/benchmarks/prem_ani_noocean_Q_Cowling_Vanuatu/STATIONS
index 1af5636..059882c 100644
--- a/benchmarks/prem_ani_noocean_Q_Cowling_Vanuatu/STATIONS
+++ b/benchmarks/prem_ani_noocean_Q_Cowling_Vanuatu/STATIONS
@@ -1,4 +1,3 @@
-35
BBSR IU +32.371200 -064.696200 6.0 0.0
SAML IU -08.948800 -063.183200 130.0 0.0
SFJD IU +66.995999 -050.621500 328.0 0.0
diff --git a/benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/SEMD/DATA/STATIONS b/benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/SEMD/DATA/STATIONS
index 1af5636..059882c 100644
--- a/benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/SEMD/DATA/STATIONS
+++ b/benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/SEMD/DATA/STATIONS
@@ -1,4 +1,3 @@
-35
BBSR IU +32.371200 -064.696200 6.0 0.0
SAML IU -08.948800 -063.183200 130.0 0.0
SFJD IU +66.995999 -050.621500 328.0 0.0
diff --git a/benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/STATIONS b/benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/STATIONS
index 1af5636..059882c 100644
--- a/benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/STATIONS
+++ b/benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/STATIONS
@@ -1,4 +1,3 @@
-35
BBSR IU +32.371200 -064.696200 6.0 0.0
SAML IU -08.948800 -063.183200 130.0 0.0
SFJD IU +66.995999 -050.621500 328.0 0.0
diff --git a/noise_examples/test_global/Par_file_NOISE_1_attenuation b/noise_examples/test_global/Par_file_NOISE_1_attenuation
index 8f6fd12..2801e84 100644
--- a/noise_examples/test_global/Par_file_NOISE_1_attenuation
+++ b/noise_examples/test_global/Par_file_NOISE_1_attenuation
@@ -130,3 +130,16 @@ PRINT_SOURCE_TIME_FUNCTION = .true.
# output kernels on a regular grid instead of on the mesh points
SAVE_REGULAR_KL = .false.
+#-----------------------------------------------------------
+
+# set to true to use GPUs
+GPU_MODE = .false.
+
+# set to true to use the ADIOS library for I/Os
+ADIOS_ENABLED = .false.
+ADIOS_FOR_FORWARD_ARRAYS = .true.
+ADIOS_FOR_MPI_ARRAYS = .true.
+ADIOS_FOR_ARRAYS_SOLVER = .true.
+ADIOS_FOR_SOLVER_MESHFILES = .true.
+ADIOS_FOR_AVS_DX = .true.
+
diff --git a/noise_examples/test_global/Par_file_NOISE_1_noattenuation b/noise_examples/test_global/Par_file_NOISE_1_noattenuation
index 918dc0c..b330bcc 100644
--- a/noise_examples/test_global/Par_file_NOISE_1_noattenuation
+++ b/noise_examples/test_global/Par_file_NOISE_1_noattenuation
@@ -130,3 +130,16 @@ PRINT_SOURCE_TIME_FUNCTION = .true.
# output kernels on a regular grid instead of on the mesh points
SAVE_REGULAR_KL = .false.
+#-----------------------------------------------------------
+
+# set to true to use GPUs
+GPU_MODE = .false.
+
+# set to true to use the ADIOS library for I/Os
+ADIOS_ENABLED = .false.
+ADIOS_FOR_FORWARD_ARRAYS = .true.
+ADIOS_FOR_MPI_ARRAYS = .true.
+ADIOS_FOR_ARRAYS_SOLVER = .true.
+ADIOS_FOR_SOLVER_MESHFILES = .true.
+ADIOS_FOR_AVS_DX = .true.
+
diff --git a/noise_examples/test_global/Par_file_NOISE_2_attenuation b/noise_examples/test_global/Par_file_NOISE_2_attenuation
index ddd391d..e244a4b 100644
--- a/noise_examples/test_global/Par_file_NOISE_2_attenuation
+++ b/noise_examples/test_global/Par_file_NOISE_2_attenuation
@@ -130,3 +130,16 @@ PRINT_SOURCE_TIME_FUNCTION = .true.
# output kernels on a regular grid instead of on the mesh points
SAVE_REGULAR_KL = .false.
+#-----------------------------------------------------------
+
+# set to true to use GPUs
+GPU_MODE = .false.
+
+# set to true to use the ADIOS library for I/Os
+ADIOS_ENABLED = .false.
+ADIOS_FOR_FORWARD_ARRAYS = .true.
+ADIOS_FOR_MPI_ARRAYS = .true.
+ADIOS_FOR_ARRAYS_SOLVER = .true.
+ADIOS_FOR_SOLVER_MESHFILES = .true.
+ADIOS_FOR_AVS_DX = .true.
+
diff --git a/noise_examples/test_global/Par_file_NOISE_2_noattenuation b/noise_examples/test_global/Par_file_NOISE_2_noattenuation
index 0422785..380457c 100644
--- a/noise_examples/test_global/Par_file_NOISE_2_noattenuation
+++ b/noise_examples/test_global/Par_file_NOISE_2_noattenuation
@@ -130,3 +130,16 @@ PRINT_SOURCE_TIME_FUNCTION = .true.
# output kernels on a regular grid instead of on the mesh points
SAVE_REGULAR_KL = .false.
+#-----------------------------------------------------------
+
+# set to true to use GPUs
+GPU_MODE = .false.
+
+# set to true to use the ADIOS library for I/Os
+ADIOS_ENABLED = .false.
+ADIOS_FOR_FORWARD_ARRAYS = .true.
+ADIOS_FOR_MPI_ARRAYS = .true.
+ADIOS_FOR_ARRAYS_SOLVER = .true.
+ADIOS_FOR_SOLVER_MESHFILES = .true.
+ADIOS_FOR_AVS_DX = .true.
+
diff --git a/noise_examples/test_global/Par_file_NOISE_3_noattenuation b/noise_examples/test_global/Par_file_NOISE_3_noattenuation
index c8a08a6..fb07af9 100644
--- a/noise_examples/test_global/Par_file_NOISE_3_noattenuation
+++ b/noise_examples/test_global/Par_file_NOISE_3_noattenuation
@@ -130,3 +130,16 @@ PRINT_SOURCE_TIME_FUNCTION = .true.
# output kernels on a regular grid instead of on the mesh points
SAVE_REGULAR_KL = .false.
+#-----------------------------------------------------------
+
+# set to true to use GPUs
+GPU_MODE = .false.
+
+# set to true to use the ADIOS library for I/Os
+ADIOS_ENABLED = .false.
+ADIOS_FOR_FORWARD_ARRAYS = .true.
+ADIOS_FOR_MPI_ARRAYS = .true.
+ADIOS_FOR_ARRAYS_SOLVER = .true.
+ADIOS_FOR_SOLVER_MESHFILES = .true.
+ADIOS_FOR_AVS_DX = .true.
+
diff --git a/noise_examples/test_regional/Par_file_NOISE_1_attenuation b/noise_examples/test_regional/Par_file_NOISE_1_attenuation
index ffb41a8..694aa96 100644
--- a/noise_examples/test_regional/Par_file_NOISE_1_attenuation
+++ b/noise_examples/test_regional/Par_file_NOISE_1_attenuation
@@ -130,3 +130,16 @@ PRINT_SOURCE_TIME_FUNCTION = .true.
# output kernels on a regular grid instead of on the mesh points
SAVE_REGULAR_KL = .false.
+#-----------------------------------------------------------
+
+# set to true to use GPUs
+GPU_MODE = .false.
+
+# set to true to use the ADIOS library for I/Os
+ADIOS_ENABLED = .false.
+ADIOS_FOR_FORWARD_ARRAYS = .true.
+ADIOS_FOR_MPI_ARRAYS = .true.
+ADIOS_FOR_ARRAYS_SOLVER = .true.
+ADIOS_FOR_SOLVER_MESHFILES = .true.
+ADIOS_FOR_AVS_DX = .true.
+
diff --git a/noise_examples/test_regional/Par_file_NOISE_1_noattenuation b/noise_examples/test_regional/Par_file_NOISE_1_noattenuation
index 55336ec..f393db4 100644
--- a/noise_examples/test_regional/Par_file_NOISE_1_noattenuation
+++ b/noise_examples/test_regional/Par_file_NOISE_1_noattenuation
@@ -130,3 +130,16 @@ PRINT_SOURCE_TIME_FUNCTION = .true.
# output kernels on a regular grid instead of on the mesh points
SAVE_REGULAR_KL = .false.
+#-----------------------------------------------------------
+
+# set to true to use GPUs
+GPU_MODE = .false.
+
+# set to true to use the ADIOS library for I/Os
+ADIOS_ENABLED = .false.
+ADIOS_FOR_FORWARD_ARRAYS = .true.
+ADIOS_FOR_MPI_ARRAYS = .true.
+ADIOS_FOR_ARRAYS_SOLVER = .true.
+ADIOS_FOR_SOLVER_MESHFILES = .true.
+ADIOS_FOR_AVS_DX = .true.
+
diff --git a/noise_examples/test_regional/Par_file_NOISE_2_attenuation b/noise_examples/test_regional/Par_file_NOISE_2_attenuation
index d3729ee..8f1c364 100644
--- a/noise_examples/test_regional/Par_file_NOISE_2_attenuation
+++ b/noise_examples/test_regional/Par_file_NOISE_2_attenuation
@@ -130,3 +130,16 @@ PRINT_SOURCE_TIME_FUNCTION = .true.
# output kernels on a regular grid instead of on the mesh points
SAVE_REGULAR_KL = .false.
+#-----------------------------------------------------------
+
+# set to true to use GPUs
+GPU_MODE = .false.
+
+# set to true to use the ADIOS library for I/Os
+ADIOS_ENABLED = .false.
+ADIOS_FOR_FORWARD_ARRAYS = .true.
+ADIOS_FOR_MPI_ARRAYS = .true.
+ADIOS_FOR_ARRAYS_SOLVER = .true.
+ADIOS_FOR_SOLVER_MESHFILES = .true.
+ADIOS_FOR_AVS_DX = .true.
+
diff --git a/noise_examples/test_regional/Par_file_NOISE_2_noattenuation b/noise_examples/test_regional/Par_file_NOISE_2_noattenuation
index ad13372..78f7f3a 100644
--- a/noise_examples/test_regional/Par_file_NOISE_2_noattenuation
+++ b/noise_examples/test_regional/Par_file_NOISE_2_noattenuation
@@ -130,3 +130,16 @@ PRINT_SOURCE_TIME_FUNCTION = .true.
# output kernels on a regular grid instead of on the mesh points
SAVE_REGULAR_KL = .false.
+#-----------------------------------------------------------
+
+# set to true to use GPUs
+GPU_MODE = .false.
+
+# set to true to use the ADIOS library for I/Os
+ADIOS_ENABLED = .false.
+ADIOS_FOR_FORWARD_ARRAYS = .true.
+ADIOS_FOR_MPI_ARRAYS = .true.
+ADIOS_FOR_ARRAYS_SOLVER = .true.
+ADIOS_FOR_SOLVER_MESHFILES = .true.
+ADIOS_FOR_AVS_DX = .true.
+
diff --git a/noise_examples/test_regional/Par_file_NOISE_3_noattenuation b/noise_examples/test_regional/Par_file_NOISE_3_noattenuation
index 358063f..7fa6fbf 100644
--- a/noise_examples/test_regional/Par_file_NOISE_3_noattenuation
+++ b/noise_examples/test_regional/Par_file_NOISE_3_noattenuation
@@ -130,3 +130,16 @@ PRINT_SOURCE_TIME_FUNCTION = .true.
# output kernels on a regular grid instead of on the mesh points
SAVE_REGULAR_KL = .false.
+#-----------------------------------------------------------
+
+# set to true to use GPUs
+GPU_MODE = .false.
+
+# set to true to use the ADIOS library for I/Os
+ADIOS_ENABLED = .false.
+ADIOS_FOR_FORWARD_ARRAYS = .true.
+ADIOS_FOR_MPI_ARRAYS = .true.
+ADIOS_FOR_ARRAYS_SOLVER = .true.
+ADIOS_FOR_SOLVER_MESHFILES = .true.
+ADIOS_FOR_AVS_DX = .true.
+
diff --git a/vi_all_Par_files_to_add_parameters_to_them.bash b/vi_all_Par_files_to_add_parameters_to_them.bash
index ae69817..4d63b12 100755
--- a/vi_all_Par_files_to_add_parameters_to_them.bash
+++ b/vi_all_Par_files_to_add_parameters_to_them.bash
@@ -1,4 +1,3 @@
#!/bin/bash
-vi ../DATA/Par_file ./global_s362ani/DATA/Par_file ./regional_MiddleEast/DATA/Par_file ./small_benchmark_run_to_test_more_complex_Earth/Par_file_this_example ./noise_examples/test_regional/Par_file_NOISE_3_noattenuation ./noise_examples/test_regional/Par_file_NOISE_2_noattenuation ./noise_examples/test_regional/Par_file_NOISE_1_noattenuation ./noise_examples/test_regional/Par_file_NOISE_1_attenuation ./noise_examples/test_regional/Par_file_NOISE_2_attenuation ./noise_examples/test_global/Par_file_NOISE_3_noattenuation ./noise_examples/test_global/Par_file_NOISE_2_noattenuation ./noise_examples/test_global/Par_file_NOISE_1_noattenuation ./noise_examples/test_global/Par_file_NOISE_1_attenuation ./noise_examples/test_global/Par_file_NOISE_2_attenuation ./noise_examples/global_short/Par_file_NOISE_3_noattenuation ./noise_examples/global_short/Par_file_NOISE_2_noattenuation ./noise_examples/global_short/Par_file_NOISE_1_noattenuation ./noise_examples/global_short/Par_file_NOISE_1_attenua
tion ./noise_examples/global_short/Par_file_NOISE_2_attenuation ./noise_examples/regional/Par_file_NOISE_3_noattenuation ./noise_examples/regional/Par_file_NOISE_2_noattenuation ./noise_examples/regional/Par_file_NOISE_1_noattenuation ./noise_examples/regional/Par_file_NOISE_1_attenuation ./noise_examples/regional/Par_file_NOISE_2_attenuation ./noise_examples/global_long/Par_file_NOISE_3_noattenuation ./noise_examples/global_long/Par_file_NOISE_2_noattenuation ./noise_examples/global_long/Par_file_NOISE_1_noattenuation ./noise_examples/global_long/Par_file_NOISE_1_attenuation ./noise_examples/global_long/Par_file_NOISE_2_attenuation ./regional_Greece_small/DATA/Par_file ./small_benchmark_run_to_test_very_simple_Earth/Par_file_this_example ./global_PREM_kernels/amplitude/DATA/Par_file ./global_PREM_kernels/traveltime/DATA/Par_file ./benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/SEMD/DATA/Par_file ./benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/SEMD/DATA/Par_file ./benchmarks/prem_
ani_noocean_Q_Cowling_Vanuatu/SEMD/DATA/Par_file
-
+vi ../DATA/Par_file ./global_s362ani/DATA/Par_file ./regional_Greece_noise_small/DATA/Par_file ./global_s362ani_shakemovie/DATA/Par_file ./regional_MiddleEast/DATA/Par_file ./small_benchmark_run_to_test_more_complex_Earth/Par_file ./noise_examples/test_regional/Par_file_NOISE_3_noattenuation ./noise_examples/test_regional/Par_file_NOISE_2_noattenuation ./noise_examples/test_regional/Par_file_NOISE_1_noattenuation ./noise_examples/test_regional/Par_file_NOISE_1_attenuation ./noise_examples/test_regional/Par_file_NOISE_2_attenuation ./noise_examples/test_global/Par_file_NOISE_3_noattenuation ./noise_examples/test_global/Par_file_NOISE_2_noattenuation ./noise_examples/test_global/Par_file_NOISE_1_noattenuation ./noise_examples/test_global/Par_file_NOISE_1_attenuation ./noise_examples/test_global/Par_file_NOISE_2_attenuation ./noise_examples/global_short/Par_file_NOISE_3_noattenuation ./noise_examples/global_short/Par_file_NOISE_2_noattenuation ./noise_examples/global_short/Par_file_NOI
SE_1_noattenuation ./noise_examples/global_short/Par_file_NOISE_1_attenuation ./noise_examples/global_short/Par_file_NOISE_2_attenuation ./noise_examples/regional/Par_file_NOISE_3_noattenuation ./noise_examples/regional/Par_file_NOISE_2_noattenuation ./noise_examples/regional/Par_file_NOISE_1_noattenuation ./noise_examples/regional/Par_file_NOISE_1_attenuation ./noise_examples/regional/Par_file_NOISE_2_attenuation ./noise_examples/global_long/Par_file_NOISE_3_noattenuation ./noise_examples/global_long/Par_file_NOISE_2_noattenuation ./noise_examples/global_long/Par_file_NOISE_1_noattenuation ./noise_examples/global_long/Par_file_NOISE_1_attenuation ./noise_examples/global_long/Par_file_NOISE_2_attenuation ./regional_Greece_small/DATA/Par_file ./small_benchmark_run_to_test_very_simple_Earth/Par_file ./global_PREM_kernels/amplitude/DATA/Par_file ./global_PREM_kernels/traveltime/DATA/Par_file ./global_s362ani_small/DATA/Par_file ./benchmarks/attenuation_benchmark_GJI_2002_versus_normal_
modes/Par_file ./benchmarks/prem_ani_noocean_Q_Cowling_Bolivia_9s/SEMD/DATA/Par_file ./benchmarks/prem_iso_noocean_Q_Cowling_Vanuatu/SEMD/DATA/Par_file ./benchmarks/prem_ani_noocean_Q_Cowling_Vanuatu/SEMD/DATA/Par_file
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