[CIG-LONG] Reg: GALE Installation

[Sue Kientz]

Subject:
RE: [CIG-LONG] Reg: GALE Installation
From:
<Guillaume.Duclaux at csiro.au>
Date:
Tue, 24 Nov 2009 14:58:55 +0800

To:
<earnest at cmmacs.ernet.in>
CC:
<cig-long-bounces at geodynamics.org>


Anil,

We have Gale installed here on an Altix machine. MPI and PETSc were already installed, so I didn't have to deal with this part.

Here is the step by step procedure I follow for compiling Gale here:

1) create two directories in my personal directory:
/short/cg01/duc025/gale_svn_source and /short/cg01/duc025/gale_svn
and change into the source directory
2) load subversion module:
module load subversion
3) Check out gale from the svn repository : 
svn checkout http://geodynamics.org/svn/cig/long/3D/Gale/trunk Gale
4) load preinstalled modules: 
module load petsc/2.3.2-p10 intel-fc intel-cc
5) cd Gale
6) ./configure.py --with-mpi-include=/usr/include --with-mpi-lib=/usr/lib/libmpi.so --prefix=/short/cg01/duc025/gale_svn --CC=icc --FC=ifort --configModules=Gale.Configure --optionsModule=Gale.compilerOptions
7) make
8) make install


Hope that helps...

Cheers

Gilly
________________________________________________
 
Dr Guillaume Duclaux
Structural Geologist /  Modeller
CSIRO Exploration and Mining
Visiting address: ARRC, 26 Dick Perry Av., Kensington WA 6151
Postal address: PO Box 1130, Bentley WA 6102, Australia
Ph: + 61 8 6436 8728    Fax: + 61 8 6436 8555    Web: www.csiro.au
 

-----Original Message-----
From: cig-long-bounces at geodynamics.org [mailto:cig-long-bounces at geodynamics.org] On Behalf Of Anil Earnest
Sent: Tuesday, 24 November 2009 10:38 AM
To: cig-long at geodynamics.org
Subject: [CIG-LONG] Reg: GALE Installation

Hi,
  I was trying to install gale in an altix machine but in vain. Below are
the steps I followed.

For Petsc installation I used:

> > config/configure.py --with-mpi-dir=/home4/earnest/programs/mpich2
>   
--with-batch=1 --with-mpi-shared=1 --with-shared=1

> > ./contest
> > ./reconfigure.py
> > make
> > make all
>   

now my .cshrc do have following lines added:

setenv PETSC_DIR /home4/earnest/programs/petsc-dev
setenv PETSC_ARCH linux-gnu-c-debug
setenv LD_LIBRARY_PATH ${PETSC_DIR}/lib/${PETSC_ARCH}

and sourced it

> > source ~/.cshrc
>   

then I tried to configure Gale with the following command:

> > ./configure.py --with-mpi-dir=/home4/earnest/programs/mpich2
>   
--with-batch=1 --with-mpi-shared=1 --with-shared=1

which gives an error message:

TESTING: configureLibrary from
Gale.packages.petsc(/home4/earnest/programs/Gale-1_4_1/python/Gale/packages/petsc.py:138)
*********************************************************************************
         UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for
details):
---------------------------------------------------------------------------------------
Can not find the include and library directories in
/home4/earnest/programs/petsc-dev
with petsc arch linux-gnu-c-debug

Hope somebody may be able to help me out.

Thanks in advance,

- Anil Earnest
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