[CIG-LONG] compiling Gale on a supercomputer
Robert Gray
graywacke at gmail.com
Mon May 28 19:14:06 PDT 2012
Hey Walter,
I've tried both:
./configure.sh --hdf5-dir=$SCINET_HDF5_BASE --cxxflags="-std=c++0x"
--linkflags="-lX11 -L/scinet/gpc/intel/mkl/lib/em64t -lmkl_lapack
-lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -openmp -pthread
-L/scinet/gpc/Libraries/petsc-3.2-p2-openmpi-mumps/linux-gnu-c-opt/lib
-ldmumps" --cxx=mpicxx
and
./configure.sh --hdf5-dir=$SCINET_HDF5_BASE --cxxflags="-std=c++0x"
--linkflags="-lX11 -L/scinet/gpc/intel/mkl/lib/em64t -lmkl_lapack
-lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -openmp -pthread
-L/scinet/gpc/Libraries/petsc-3.2-p2-openmpi-mumps/externalpackages/MUMPS_4.10.0/lib
-ldmumps" --cxx=mpicxx
The configure.sh works fine, but the code fails to compile with the same
warning.
Cheers,
Rob
On Mon, May 28, 2012 at 8:38 PM, Walter Landry <wlandry at caltech.edu> wrote:
> Robert Gray <graywacke at gmail.com> wrote:
> > Hey Walter,
> > It's in /scinet/gpc/Libraries/petsc-3.2-p2-openmpi-mumps/externalpackages
>
> Then you will have to add something like
>
> -L/scinet/gpc/Libraries/petsc-3.2-p2-openmpi-mumps/externalpackages/Mumps/lib
> -lmumps
>
> to --linkflags. You have to check exactly what the directory and
> library names are.
>
> Cheers,
> Walter Landry
>
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