[CIG-LONG] Gale 2.0.1 install problem with PETSc libraries
Morgan, Frank
Frank.Morgan at jhuapl.edu
Tue Jan 22 14:36:00 PST 2013
Trying to install Gale on redhat linux. Get error messages as follows:
**** ERROR ****
Failed to locate required package PETSc.
Details in 'config.log'
Seems to be a problem with PETSc library but I’m running out of ideas. Do you see anything?
I have petsc-3.2-p7; config.log attached.
This was my third attempt. First time, Gale couldn’t find several petsc libs...
Static missing: ['petscsnes', 'petscksp', 'petscdm', 'petscmat', 'petscvec']
I reinstalled PETSc with config flag --with-single-library=0 which generated those static libs (instead of a sinlge petsc lib)
in petsc-3.2-p7/linux-gnu-c-debug/lib
Tried Gale again and it complained that it could not find the petsc library...
Static missing: ['petsc']
Looked in: ['/home/morgamf1/Applications/petsc/petsc-3.2-p7/linux-gnu-c-debug/lib']
Then I repeated PETSc config+make with --with-single-library=1; that added the petsc lib to the others.
Then I retired Gale...
./configure.sh --cxx=mpicxx --petsc-dir=/home/morgamf1/Applications/petsc/petsc-3.2-p7 --mpi-dir=/opt/mpich2/gnu --libxml2-inc-dir=/usr/include/libxml2 --libxml2-lib-dir=/usr/lib64 --hdf5-dir=/home/morgamf1/Applications/hdf5/hdf5-1.8.10/hdf5
And got the error above.
I have defined in cshrc...
setenv PETSC_DIR /home/morgamf1/Applications/petsc/petsc-3.2-p7
setenv PETSC_ARCH linux-gnu-c-debug
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