[CIG-LONG] new install

Matty matty.mookerjee at sonoma.edu
Tue Jan 29 06:44:27 PST 2013


Thanks, Walter.  I have attached those two files.

I set PETS_DIR and PETSC_ARCH with the following:

export PETSC_DIR=$PWD   (while in my petsc install directory)
export PETSC_ARCH=linux-gnu-c-debug

Thanks again.

Matty


On 01/28/2013 08:17 PM, Walter Landry wrote:
> Matty Mookerjee <matty.mookerjee at sonoma.edu> wrote:
>> Walter,
>>
>> Thank you for the prompt response.  I really appreciate your help.
>>
>> That's good to know that Petsc 3.2 works with Gale.  Unfortunately,
>> it is not present in Ubuntu's Software Center or Synaptic.  They
>> only seem to support 3.1.  I did download the tarball from the Petsc
>> site, but that just leaves me with the same problem that I had with
>> version 3.0.  It installed and ran the test correctly, but Gale's
>> configure.sh script does not recognize Petsc as being installed.  Am
>> I missing a step where I need to link my new Petsc install with
>> Gale?
> Send config.log and config.cfg.  Also, did you set PETSC_DIR and
> PETSC_ARCH?
>
> Cheers,
> Walter Landry
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>

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prefix = '/home/matty/Programs/Gale/gale'
build_dir = 'build'
with_debugging = 1
with_warnings = 1
lib_type = 'static'
CXX = 'mpicxx'
CXXFLAGS = []
LINKFLAGS = ['$__RPATH']
with_glucifer = 0
with_hdf5 = 1
with_experimental = False
with_osmesa = 1
with_sdl = 1
with_x11 = 1
with_carbon = 1
with_png = 1
with_jpeg = 1
with_fame = 1
eptiming = 0
with_memory_stats = 0
with_cautious_mode = 0
CPPPATH = ['/usr/include/libxml2', '/home/matty/Programs/Petsc/petsc-3.0.0-p12/include', '/home/matty/Programs/Petsc/petsc-3.0.0-p12/linux-gnu-c-debug/include', '/usr/lib/openmpi/include', '/usr/lib/openmpi/lib']
LIBPATH = ['/home/matty/Programs/Petsc/petsc-3.0.0-p12/lib', '/home/matty/Programs/Petsc/petsc-3.0.0-p12/linux-gnu-c-debug/lib', '/usr/lib/openmpi/lib', '/usr/lib/gcc/x86_64-linux-gnu/4.6', '/usr/lib/x86_64-linux-gnu', '/lib/x86_64-linux-gnu', '/usr/lib/gcc/x86_64-linux-gnu']
RPATH = ['/home/matty/Programs/Petsc/petsc-3.0.0-p12/lib', '/home/matty/Programs/Petsc/petsc-3.0.0-p12/linux-gnu-c-debug/lib']
LIBS = ['petscsnes', 'petscksp', 'petscdm', 'petscmat', 'petscvec', 'petsc', 'hdf5', 'xml2', 'X11', 'lapack', 'blas', 'dl', 'mpi', 'open-rte', 'open-pal', 'nsl', 'util', 'gcc_s', 'pthread', 'mpi_f90', 'mpi_f77', 'gfortran', 'm', 'quadmath']
CPPDEFINES = ['DEBUG', 'HAVE_LIBXML2', 'HAVE_MPI', 'HAVE_HDF5', 'HAVE_PETSC']
CXXFLAGS = []
FRAMEWORKS = []
CCFLAGS = ['-g', '-Wall']
shared_libs = 0
static_libs = 1
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