[CIG-MC] CitcomS launcher modify batch script

Jonathan Perry-Houts jperryhouts at gmail.com
Thu Feb 28 13:36:08 PST 2013


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Hi all,

I was wondering if there's a simple way to modify the script that gets
run when I run the citcoms executable. The cluster I'm using has
several versions of MPI installed and I need to run `module load
mpi...` at the start of any session to set the appropriate environment
variables for the MPI version I want.

The problem I'm having is that once the citcom job submits its self to
the PBS queue, it tries to use MPI without loading the appropriate
module first. Is there a way to easily change this behavior?

Thanks in advance for any help!

Cheers,
Jonathan Perry-Houts
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