[CIG-MC] CitcomS launcher modify batch script

tan2 tan2tan2 at gmail.com
Mon Mar 4 01:16:51 PST 2013


Hi Jonathan,

You can add 'module load mpi...' in your ~/.profile (if using bash) or
~/.login (if using tcsh).


Eh

On Fri, Mar 1, 2013 at 5:36 AM, Jonathan Perry-Houts
<jperryhouts at gmail.com>wrote:

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> Hi all,
>
> I was wondering if there's a simple way to modify the script that gets
> run when I run the citcoms executable. The cluster I'm using has
> several versions of MPI installed and I need to run `module load
> mpi...` at the start of any session to set the appropriate environment
> variables for the MPI version I want.
>
> The problem I'm having is that once the citcom job submits its self to
> the PBS queue, it tries to use MPI without loading the appropriate
> module first. Is there a way to easily change this behavior?
>
> Thanks in advance for any help!
>
> Cheers,
> Jonathan Perry-Houts
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