[CIG-SEISMO] gmsh and specfem2D
giuseppe.digiulio at ingv.it
giuseppe.digiulio at ingv.it
Thu Sep 6 07:41:09 PDT 2012
I am a new user of specfem2D and I am trying to generate an external
simple 2D mesh using gmsh; this seems one nice external fe grid
generator as indicated by specfem2d user manual (version 7, page 10).
My question is about Jacobian as returned by the script
xcheck_quality_external_mesh.
I built using gmsh a simple geometry file composed of three uniform
layers (see the attached *geo file).
I performed a 2D mesh using allquads following the example shown in
specfem2D manual (fixing a minimum element size of 20 because
dimension of my model is relatively big).
gmsh 3UFscale_allquad.geo -2 -clmin 20 -order 2
I set the absorbing conditions with the python script
python ../LibGmsh2Specfem.py 3UFscale_allquad -t A -b A -r A -l A
obtaining the Mesh* Material* Nodes* Surf_abs_* and Surf_free* files.
Now my problem is in the quality of my mesh as returned by
xcheck_quality_external_mesh because it returns negative jacobian.
xcheck_quality_external_mesh
:::::::
start reading the external node file: Nodes_3UFscale_allquad
start reading the external mesh file: Mesh_3UFscale_allquad
NPOIN = 12663
NSPEC = 12462
done reading the external files
start checking if any element with a negative Jacobian is found
element 6251 has a negative Jacobian
STOP negative Jacobian found
::::::
I do not know how can I improve my mesh to pass this check; I try to
delete the element 6251 with negative Jacobian but this is not the
only one. I tried different options in the 2D meshing, but still
obtaining negative jacobian.
And it is also strange that the Jmin seems 0.497 when I use
Tool/plugins og gmsh to analyseCurveMesh (see picture in attach). If I
understood well from gmsh manual (pa. 66) Jmin should be the minimum
Jacobian and this seems not negative.
I also attached the output files output_mesher.txt and
output_solver.txt obtained by xmeshfem2D and xspecfem2D, respectively.
Of course xspecfem2D crashs, and all elements with negative Jacobian
are reported into output_solver.txt.
So my question is: how can I improve my external 2D mesh built by gmsh
for having positive jacobian everywhere ?
If someone of developpers has any suggestions to improve my mesh
deleting elements with negative jacobian in my mesh, these are
welcome!!!
The file *tar.gz contains my trial of mesh
Best regards and thank you in advance!
Giuseppe Di Giulio
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lc = 1e-1;
Point(1) = {0, 0, 0, lc};
Point(2) = {1000, 0, 0, lc};
Point(3) = {0, 1000, 0, lc};
Point(4) = {1000, 1000, 0, lc};
Point(5) = {0, 500, 0, lc};
Point(6) = {1000, 500, 0, lc};
Point(7) = {0, 800, 0, lc};
Point(8) = {1000, 800, 0, lc};
Line(1) = {1, 2};
Line(2) = {2, 6};
Line(3) = {6, 5};
Line(4) = {5, 1};
Line(5) = {5, 7};
Line(6) = {7, 8};
Line(7) = {8, 6};
Line(8) = {8, 4};
Line(9) = {4, 3};
Line(10) = {3, 7};
Line Loop(11) = {1, 2, 3, 4};
Plane Surface(12) = {11};
Line Loop(13) = {3, 5, 6, 7};
Plane Surface(14) = {13};
Line Loop(15) = {6, 8, 9, 10};
Plane Surface(16) = {15};
Recombine Surface{12,14,16};
Mesh.SubdivisionAlgorithm=1;
Mesh.RandomFactor=1e-6;
Physical Line("Top") = {9};
Physical Line("Left") = {10,-5,4};
Physical Line("Bottom") = {1};
Physical Line("Right") = {2,-7,8};
Physical Surface("M1") = {16};
Physical Surface("M2") = {14};
Physical Surface("M3") = {12};
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-------------------------------------------------------------------------------
-------------------------------------------------------------------------------
Program SPECFEM2D:
-------------------------------------------------------------------------------
-------------------------------------------------------------------------------
3UF Three Uniform layers
-------------------------------------------------------------------------------
-------------------------------------------------------------------------------
D a t e : 05 - 09 - 2012 T i m e : 16:57:22
-------------------------------------------------------------------------------
-------------------------------------------------------------------------------
*********************
**** ****
**** SPECFEM2D ****
**** ****
*********************
C o n t r o l
=============
Number of spectral element control nodes. . .(npgeo) = 50249
Number of space dimensions. . . . . . . . . . (NDIM) = 2
C o n t r o l
=============
Display frequency . . . (NTSTEP_BETWEEN_OUTPUT_INFO) = 300
Color display . . . . . . . . . . . . . . . (colors) = 1
== 0 black and white display
== 1 color display
Numbered mesh . . . . . . . . . . . . . . .(numbers) = 0
== 0 do not number the mesh
== 1 number the mesh
C o n t r o l
=============
Seismograms recording type . . . . . . .(seismotype) = 1
Angle for first line of receivers. . . . .(anglerec) = 0.00
C o n t r o l
=============
Read external initial field. . . . . .(initialfield) = F
Add Bielak conditions . . . .(add_Bielak_conditions) = F
Assign external model . . . .(assign_external_model) = F
Read external SEP file . . .(READ_EXTERNAL_SEP_FILE) = F
Attenuation on/off .(ATTENUATION_VISCOELASTIC_SOLID) = F
Save grid in external file or not. . . (output_grid) = F
Save a file with total energy or not.(output_energy) = F
C o n t r o l
=============
Vector display type . . . . . . . . . . . . . . (imagetype) = 1
Percentage of cut for vector plots. . . . . . . .(cutsnaps) = 1.00
Subsampling of velocity model display. (subsamp_postscript) = 1
I t e r a t i o n s
===================
Number of time iterations . . . . .(NSTEP) = 2400
Time step increment. . . . . . . .(deltat) = 5.000000E-08
Total simulation duration . . . . . (ttot) = 1.200000E-04
Source Type. . . . . . . . . . . . . . = Collocated Force
X-position (meters). . . . . . . . . . = 5.0000000000E+02
Y-position (meters). . . . . . . . . . = 2.0000000000E+02
Fundamental frequency (Hz) . . . . . . = 6.0000000000E+03
Time delay (s) . . . . . . . . . . . . = 0.0000000000E+00
Multiplying factor . . . . . . . . . . = 1.0000000000E+10
Angle from vertical direction (deg). . = 0.0000000000E+00
Onset time. . . . . . = 1.99999999999999982E-004
Fundamental period. . = 1.66666666666666661E-004
Fundamental frequency = 6000.0000000000000
--> onset time ok
--> Isoparametric Spectral Elements <--
Number of spectral elements . . . . . (nspec) = 12462
Number of control nodes per element . (ngnod) = 9
Number of points in X-direction . . . (NGLLX) = 5
Number of points in Y-direction . . . (NGLLZ) = 5
Number of points per element. . .(NGLLX*NGLLZ) = 25
Number of points for display . . .(pointsdisp) = 6
Number of element material sets . . . (numat) = 3
Number of absorbing elements . . . .(nelemabs) = 396
M a t e r i a l s e t s : 2 D (p o r o) e l a s t i c i t y
======================================================
Number of material sets . . . . . . (numat) = 3
----------------------------------------
-- Elastic (solid) isotropic material --
----------------------------------------
Material set number. . . . . . . . (jmat) = 1
P-wave velocity. . . . . . . . . . . (cp) = 1.00000000E+03
S-wave velocity. . . . . . . . . . . (cs) = 5.00000000E+02
Mass density. . . . . . . . . . (density) = 2.00000000E+03
Poisson's ratio. . . . . . . . .(poisson) = 3.33333333E-01
First Lame parameter Lambda. . . (lambda) = 1.00000000E+09
Second Lame parameter Mu. . . . . . .(mu) = 5.00000000E+08
Bulk modulus Kappa . . . . . . . .(kappa) = 1.33333333E+09
Young's modulus E. . . . . . . . .(young) = 1.33333333E+09
QKappa_attenuation . . . . . . .(QKappa) = 1.00000000E+01
Qmu_attenuation . . . . . . . . . . (Qmu) = 1.00000000E+01
----------------------------------------
-- Elastic (solid) isotropic material --
----------------------------------------
Material set number. . . . . . . . (jmat) = 2
P-wave velocity. . . . . . . . . . . (cp) = 1.60000000E+03
S-wave velocity. . . . . . . . . . . (cs) = 8.00000000E+02
Mass density. . . . . . . . . . (density) = 2.00000000E+03
Poisson's ratio. . . . . . . . .(poisson) = 3.33333333E-01
First Lame parameter Lambda. . . (lambda) = 2.56000000E+09
Second Lame parameter Mu. . . . . . .(mu) = 1.28000000E+09
Bulk modulus Kappa . . . . . . . .(kappa) = 3.41333333E+09
Young's modulus E. . . . . . . . .(young) = 3.41333333E+09
QKappa_attenuation . . . . . . .(QKappa) = 1.00000000E+01
Qmu_attenuation . . . . . . . . . . (Qmu) = 1.00000000E+01
----------------------------------------
-- Elastic (solid) isotropic material --
----------------------------------------
Material set number. . . . . . . . (jmat) = 3
P-wave velocity. . . . . . . . . . . (cp) = 3.00000000E+03
S-wave velocity. . . . . . . . . . . (cs) = 1.50000000E+03
Mass density. . . . . . . . . . (density) = 2.00000000E+03
Poisson's ratio. . . . . . . . .(poisson) = 3.33333333E-01
First Lame parameter Lambda. . . (lambda) = 9.00000000E+09
Second Lame parameter Mu. . . . . . .(mu) = 4.50000000E+09
Bulk modulus Kappa . . . . . . . .(kappa) = 1.20000000E+10
Young's modulus E. . . . . . . . .(young) = 1.20000000E+10
QKappa_attenuation . . . . . . .(QKappa) = 1.00000000E+01
Qmu_attenuation . . . . . . . . . . (Qmu) = 1.00000000E+01
Number of absorbing elements: 396
nspec_left = 106
nspec_right = 90
nspec_bottom = 106
nspec_top = 97
Generating global mesh numbering (fast version)...
Total number of points of the global mesh: 200193
Total number of receivers = 10
element 6251 has a negative Jacobian
element 6252 has a negative Jacobian
element 6253 has a negative Jacobian
element 6254 has a negative Jacobian
element 6255 has a negative Jacobian
element 6256 has a negative Jacobian
element 6257 has a negative Jacobian
element 6258 has a negative Jacobian
element 6259 has a negative Jacobian
element 6260 has a negative Jacobian
element 6261 has a negative Jacobian
element 6262 has a negative Jacobian
element 6263 has a negative Jacobian
element 6264 has a negative Jacobian
element 6265 has a negative Jacobian
element 6266 has a negative Jacobian
element 6267 has a negative Jacobian
element 6268 has a negative Jacobian
element 6269 has a negative Jacobian
element 6270 has a negative Jacobian
element 6271 has a negative Jacobian
element 6272 has a negative Jacobian
element 6273 has a negative Jacobian
element 6274 has a negative Jacobian
element 6275 has a negative Jacobian
element 6276 has a negative Jacobian
element 6277 has a negative Jacobian
element 6278 has a negative Jacobian
element 6279 has a negative Jacobian
element 6280 has a negative Jacobian
element 6281 has a negative Jacobian
element 6282 has a negative Jacobian
element 6283 has a negative Jacobian
element 6284 has a negative Jacobian
element 6285 has a negative Jacobian
element 6286 has a negative Jacobian
element 6287 has a negative Jacobian
element 6288 has a negative Jacobian
element 6289 has a negative Jacobian
element 6290 has a negative Jacobian
element 6291 has a negative Jacobian
element 6292 has a negative Jacobian
element 6293 has a negative Jacobian
element 6294 has a negative Jacobian
element 6295 has a negative Jacobian
element 6296 has a negative Jacobian
element 6297 has a negative Jacobian
element 6298 has a negative Jacobian
element 6299 has a negative Jacobian
element 6300 has a negative Jacobian
element 6301 has a negative Jacobian
element 6302 has a negative Jacobian
element 6303 has a negative Jacobian
element 6304 has a negative Jacobian
element 6305 has a negative Jacobian
element 6306 has a negative Jacobian
element 6307 has a negative Jacobian
element 6308 has a negative Jacobian
element 6309 has a negative Jacobian
element 6310 has a negative Jacobian
element 6311 has a negative Jacobian
element 6312 has a negative Jacobian
element 6313 has a negative Jacobian
element 6314 has a negative Jacobian
element 6315 has a negative Jacobian
element 6316 has a negative Jacobian
element 6317 has a negative Jacobian
element 6318 has a negative Jacobian
element 6319 has a negative Jacobian
element 6320 has a negative Jacobian
element 6321 has a negative Jacobian
element 6322 has a negative Jacobian
element 6323 has a negative Jacobian
element 6324 has a negative Jacobian
element 6325 has a negative Jacobian
element 6326 has a negative Jacobian
element 6327 has a negative Jacobian
element 6328 has a negative Jacobian
element 6329 has a negative Jacobian
element 6330 has a negative Jacobian
element 6331 has a negative Jacobian
element 6332 has a negative Jacobian
element 6333 has a negative Jacobian
element 6334 has a negative Jacobian
element 6335 has a negative Jacobian
element 6336 has a negative Jacobian
element 6337 has a negative Jacobian
element 6338 has a negative Jacobian
element 6339 has a negative Jacobian
element 6340 has a negative Jacobian
element 6341 has a negative Jacobian
element 6342 has a negative Jacobian
element 6343 has a negative Jacobian
element 6344 has a negative Jacobian
element 6345 has a negative Jacobian
element 6346 has a negative Jacobian
element 6347 has a negative Jacobian
element 6348 has a negative Jacobian
element 6349 has a negative Jacobian
element 6350 has a negative Jacobian
element 6351 has a negative Jacobian
element 6352 has a negative Jacobian
element 6353 has a negative Jacobian
element 6354 has a negative Jacobian
element 6355 has a negative Jacobian
element 6356 has a negative Jacobian
element 6357 has a negative Jacobian
element 6358 has a negative Jacobian
element 6359 has a negative Jacobian
element 6360 has a negative Jacobian
element 6361 has a negative Jacobian
element 6362 has a negative Jacobian
element 6363 has a negative Jacobian
element 6364 has a negative Jacobian
element 6365 has a negative Jacobian
element 6366 has a negative Jacobian
element 6367 has a negative Jacobian
element 6368 has a negative Jacobian
element 6369 has a negative Jacobian
element 6370 has a negative Jacobian
element 6371 has a negative Jacobian
element 6372 has a negative Jacobian
element 6373 has a negative Jacobian
element 6374 has a negative Jacobian
element 6375 has a negative Jacobian
element 6376 has a negative Jacobian
element 6377 has a negative Jacobian
element 6378 has a negative Jacobian
element 6379 has a negative Jacobian
element 6380 has a negative Jacobian
element 6381 has a negative Jacobian
element 6382 has a negative Jacobian
element 6383 has a negative Jacobian
element 6384 has a negative Jacobian
element 6385 has a negative Jacobian
element 6386 has a negative Jacobian
element 6387 has a negative Jacobian
element 6388 has a negative Jacobian
element 6389 has a negative Jacobian
element 6390 has a negative Jacobian
element 6391 has a negative Jacobian
element 6392 has a negative Jacobian
element 6393 has a negative Jacobian
element 6394 has a negative Jacobian
element 6395 has a negative Jacobian
element 6396 has a negative Jacobian
element 6397 has a negative Jacobian
element 6398 has a negative Jacobian
element 6399 has a negative Jacobian
element 6400 has a negative Jacobian
element 6401 has a negative Jacobian
element 6402 has a negative Jacobian
element 6403 has a negative Jacobian
element 6404 has a negative Jacobian
element 6405 has a negative Jacobian
element 6406 has a negative Jacobian
element 6407 has a negative Jacobian
element 6408 has a negative Jacobian
element 6409 has a negative Jacobian
element 6410 has a negative Jacobian
element 6411 has a negative Jacobian
element 6412 has a negative Jacobian
element 6413 has a negative Jacobian
element 6414 has a negative Jacobian
element 6415 has a negative Jacobian
element 6416 has a negative Jacobian
element 6417 has a negative Jacobian
element 6418 has a negative Jacobian
element 6419 has a negative Jacobian
element 6420 has a negative Jacobian
element 6421 has a negative Jacobian
element 6422 has a negative Jacobian
element 6423 has a negative Jacobian
element 6424 has a negative Jacobian
element 6425 has a negative Jacobian
element 6426 has a negative Jacobian
element 6427 has a negative Jacobian
element 6428 has a negative Jacobian
element 6429 has a negative Jacobian
element 6430 has a negative Jacobian
element 6431 has a negative Jacobian
element 6432 has a negative Jacobian
element 6433 has a negative Jacobian
element 6434 has a negative Jacobian
element 6435 has a negative Jacobian
element 6436 has a negative Jacobian
element 6437 has a negative Jacobian
element 6438 has a negative Jacobian
element 6439 has a negative Jacobian
element 6440 has a negative Jacobian
element 6441 has a negative Jacobian
element 6442 has a negative Jacobian
element 6443 has a negative Jacobian
element 6444 has a negative Jacobian
element 6445 has a negative Jacobian
element 6446 has a negative Jacobian
element 6447 has a negative Jacobian
element 6448 has a negative Jacobian
element 6449 has a negative Jacobian
element 6450 has a negative Jacobian
element 6451 has a negative Jacobian
element 6452 has a negative Jacobian
element 6453 has a negative Jacobian
element 6454 has a negative Jacobian
element 6455 has a negative Jacobian
element 6456 has a negative Jacobian
element 6457 has a negative Jacobian
element 6458 has a negative Jacobian
element 6459 has a negative Jacobian
element 6460 has a negative Jacobian
element 6461 has a negative Jacobian
element 6462 has a negative Jacobian
element 6463 has a negative Jacobian
element 6464 has a negative Jacobian
element 6465 has a negative Jacobian
element 6466 has a negative Jacobian
element 6467 has a negative Jacobian
element 6468 has a negative Jacobian
element 6469 has a negative Jacobian
element 6470 has a negative Jacobian
element 6471 has a negative Jacobian
element 6472 has a negative Jacobian
element 6473 has a negative Jacobian
element 6474 has a negative Jacobian
element 6475 has a negative Jacobian
element 6476 has a negative Jacobian
element 6477 has a negative Jacobian
element 6478 has a negative Jacobian
element 6479 has a negative Jacobian
element 6480 has a negative Jacobian
element 6481 has a negative Jacobian
element 6482 has a negative Jacobian
element 6483 has a negative Jacobian
element 6484 has a negative Jacobian
element 6485 has a negative Jacobian
element 6486 has a negative Jacobian
element 6487 has a negative Jacobian
element 6488 has a negative Jacobian
element 6489 has a negative Jacobian
element 6490 has a negative Jacobian
element 6491 has a negative Jacobian
element 6492 has a negative Jacobian
element 6493 has a negative Jacobian
element 6494 has a negative Jacobian
element 6495 has a negative Jacobian
element 6496 has a negative Jacobian
element 6497 has a negative Jacobian
element 6498 has a negative Jacobian
element 6499 has a negative Jacobian
element 6500 has a negative Jacobian
element 6501 has a negative Jacobian
element 6502 has a negative Jacobian
element 6503 has a negative Jacobian
element 6504 has a negative Jacobian
element 6505 has a negative Jacobian
element 6506 has a negative Jacobian
element 6507 has a negative Jacobian
element 6508 has a negative Jacobian
element 6509 has a negative Jacobian
element 6510 has a negative Jacobian
element 6511 has a negative Jacobian
element 6512 has a negative Jacobian
element 6513 has a negative Jacobian
element 6514 has a negative Jacobian
element 6515 has a negative Jacobian
element 6516 has a negative Jacobian
element 6517 has a negative Jacobian
element 6518 has a negative Jacobian
element 6519 has a negative Jacobian
element 6520 has a negative Jacobian
element 6521 has a negative Jacobian
element 6522 has a negative Jacobian
element 6523 has a negative Jacobian
element 6524 has a negative Jacobian
element 6525 has a negative Jacobian
element 6526 has a negative Jacobian
element 6527 has a negative Jacobian
element 6528 has a negative Jacobian
element 6529 has a negative Jacobian
element 6530 has a negative Jacobian
element 6531 has a negative Jacobian
element 6532 has a negative Jacobian
element 6533 has a negative Jacobian
element 6534 has a negative Jacobian
element 6535 has a negative Jacobian
element 6536 has a negative Jacobian
element 6537 has a negative Jacobian
element 6538 has a negative Jacobian
element 6539 has a negative Jacobian
element 6540 has a negative Jacobian
element 6541 has a negative Jacobian
element 6542 has a negative Jacobian
element 6543 has a negative Jacobian
element 6544 has a negative Jacobian
element 6545 has a negative Jacobian
element 6546 has a negative Jacobian
element 6547 has a negative Jacobian
element 6548 has a negative Jacobian
element 6549 has a negative Jacobian
element 6550 has a negative Jacobian
element 6551 has a negative Jacobian
element 6552 has a negative Jacobian
element 6553 has a negative Jacobian
element 6554 has a negative Jacobian
element 6555 has a negative Jacobian
element 6556 has a negative Jacobian
element 6557 has a negative Jacobian
element 6558 has a negative Jacobian
element 6559 has a negative Jacobian
element 6560 has a negative Jacobian
element 6561 has a negative Jacobian
element 6562 has a negative Jacobian
element 6563 has a negative Jacobian
element 6564 has a negative Jacobian
element 6565 has a negative Jacobian
element 6566 has a negative Jacobian
element 6567 has a negative Jacobian
element 6568 has a negative Jacobian
element 6569 has a negative Jacobian
element 6570 has a negative Jacobian
element 6571 has a negative Jacobian
element 6572 has a negative Jacobian
element 6573 has a negative Jacobian
element 6574 has a negative Jacobian
element 6575 has a negative Jacobian
element 6576 has a negative Jacobian
element 6577 has a negative Jacobian
element 6578 has a negative Jacobian
element 6579 has a negative Jacobian
element 6580 has a negative Jacobian
element 6581 has a negative Jacobian
element 6582 has a negative Jacobian
element 6583 has a negative Jacobian
element 6584 has a negative Jacobian
element 6585 has a negative Jacobian
element 6586 has a negative Jacobian
element 6587 has a negative Jacobian
element 6588 has a negative Jacobian
element 6589 has a negative Jacobian
element 6590 has a negative Jacobian
element 6591 has a negative Jacobian
element 6592 has a negative Jacobian
element 6593 has a negative Jacobian
element 6594 has a negative Jacobian
element 6595 has a negative Jacobian
element 6596 has a negative Jacobian
element 6597 has a negative Jacobian
element 6598 has a negative Jacobian
element 6599 has a negative Jacobian
element 6600 has a negative Jacobian
element 6601 has a negative Jacobian
element 6602 has a negative Jacobian
element 6603 has a negative Jacobian
element 6604 has a negative Jacobian
element 6605 has a negative Jacobian
element 6606 has a negative Jacobian
element 6607 has a negative Jacobian
element 6608 has a negative Jacobian
element 6609 has a negative Jacobian
element 6610 has a negative Jacobian
element 6611 has a negative Jacobian
element 6612 has a negative Jacobian
element 6613 has a negative Jacobian
element 6614 has a negative Jacobian
element 6615 has a negative Jacobian
element 6616 has a negative Jacobian
element 6617 has a negative Jacobian
element 6618 has a negative Jacobian
element 6619 has a negative Jacobian
element 6620 has a negative Jacobian
element 6621 has a negative Jacobian
element 6622 has a negative Jacobian
element 6623 has a negative Jacobian
element 6624 has a negative Jacobian
element 6625 has a negative Jacobian
element 6626 has a negative Jacobian
element 6627 has a negative Jacobian
element 6628 has a negative Jacobian
element 6629 has a negative Jacobian
element 6630 has a negative Jacobian
element 6631 has a negative Jacobian
element 6632 has a negative Jacobian
element 6633 has a negative Jacobian
element 6634 has a negative Jacobian
element 6635 has a negative Jacobian
element 6636 has a negative Jacobian
element 6637 has a negative Jacobian
element 6638 has a negative Jacobian
element 6639 has a negative Jacobian
element 6640 has a negative Jacobian
element 6641 has a negative Jacobian
element 6642 has a negative Jacobian
element 6643 has a negative Jacobian
element 6644 has a negative Jacobian
element 6645 has a negative Jacobian
element 6646 has a negative Jacobian
element 6647 has a negative Jacobian
element 6648 has a negative Jacobian
element 6649 has a negative Jacobian
element 6650 has a negative Jacobian
element 6651 has a negative Jacobian
element 6652 has a negative Jacobian
element 6653 has a negative Jacobian
element 6654 has a negative Jacobian
element 6655 has a negative Jacobian
element 6656 has a negative Jacobian
element 6657 has a negative Jacobian
element 6658 has a negative Jacobian
element 6659 has a negative Jacobian
element 6660 has a negative Jacobian
element 6661 has a negative Jacobian
element 6662 has a negative Jacobian
element 6663 has a negative Jacobian
element 6664 has a negative Jacobian
element 6665 has a negative Jacobian
element 6666 has a negative Jacobian
element 6667 has a negative Jacobian
element 6668 has a negative Jacobian
element 6669 has a negative Jacobian
element 6670 has a negative Jacobian
element 6671 has a negative Jacobian
element 6672 has a negative Jacobian
element 6673 has a negative Jacobian
element 6674 has a negative Jacobian
element 6675 has a negative Jacobian
element 6676 has a negative Jacobian
element 6677 has a negative Jacobian
element 6678 has a negative Jacobian
element 6679 has a negative Jacobian
element 6680 has a negative Jacobian
element 6681 has a negative Jacobian
element 6682 has a negative Jacobian
element 6683 has a negative Jacobian
element 6684 has a negative Jacobian
element 6685 has a negative Jacobian
element 6686 has a negative Jacobian
element 6687 has a negative Jacobian
element 6688 has a negative Jacobian
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element 9955 has a negative Jacobian
element 9956 has a negative Jacobian
element 9957 has a negative Jacobian
element 9958 has a negative Jacobian
element 9959 has a negative Jacobian
element 9960 has a negative Jacobian
element 9961 has a negative Jacobian
element 9962 has a negative Jacobian
element 9963 has a negative Jacobian
element 9964 has a negative Jacobian
element 9965 has a negative Jacobian
element 9966 has a negative Jacobian
element 9967 has a negative Jacobian
element 9968 has a negative Jacobian
element 9969 has a negative Jacobian
element 9970 has a negative Jacobian
element 9971 has a negative Jacobian
element 9972 has a negative Jacobian
element 9973 has a negative Jacobian
element 9974 has a negative Jacobian
element 9975 has a negative Jacobian
element 9976 has a negative Jacobian
element 9977 has a negative Jacobian
element 9978 has a negative Jacobian
element 9979 has a negative Jacobian
element 9980 has a negative Jacobian
element 9981 has a negative Jacobian
element 9982 has a negative Jacobian
element 9983 has a negative Jacobian
element 9984 has a negative Jacobian
element 9985 has a negative Jacobian
element 9986 has a negative Jacobian
element 9987 has a negative Jacobian
element 9988 has a negative Jacobian
element 9989 has a negative Jacobian
element 9990 has a negative Jacobian
element 9991 has a negative Jacobian
element 9992 has a negative Jacobian
element 9993 has a negative Jacobian
element 9994 has a negative Jacobian
element 9995 has a negative Jacobian
element 9996 has a negative Jacobian
element 9997 has a negative Jacobian
element 9998 has a negative Jacobian
element 9999 has a negative Jacobian
element 10000 has a negative Jacobian
element 10001 has a negative Jacobian
element 10002 has a negative Jacobian
element 10003 has a negative Jacobian
element 10004 has a negative Jacobian
element 10005 has a negative Jacobian
element 10006 has a negative Jacobian
element 10007 has a negative Jacobian
element 10008 has a negative Jacobian
element 10009 has a negative Jacobian
element 10010 has a negative Jacobian
element 10011 has a negative Jacobian
element 10012 has a negative Jacobian
element 10013 has a negative Jacobian
element 10014 has a negative Jacobian
element 10015 has a negative Jacobian
element 10016 has a negative Jacobian
element 10017 has a negative Jacobian
element 10018 has a negative Jacobian
element 10019 has a negative Jacobian
element 10020 has a negative Jacobian
element 10021 has a negative Jacobian
element 10022 has a negative Jacobian
element 10023 has a negative Jacobian
element 10024 has a negative Jacobian
element 10025 has a negative Jacobian
element 10026 has a negative Jacobian
element 10027 has a negative Jacobian
element 10028 has a negative Jacobian
element 10029 has a negative Jacobian
element 10030 has a negative Jacobian
element 10031 has a negative Jacobian
element 10032 has a negative Jacobian
element 10033 has a negative Jacobian
element 10034 has a negative Jacobian
3784 elements have a negative Jacobian, out of 12462
i.e., 30.364307 %
ispec = 6251
ngnod = 9
node 1 x,y = 566.77489900000000 644.93509200000005
node 2 x,y = 563.80868099999998 653.93014900000003
node 3 x,y = 572.25548200000003 658.81817999999998
node 4 x,y = 575.72179200000005 649.38937199999998
node 5 x,y = 565.29178999999999 649.43262100000004
node 6 x,y = 568.03208199999995 656.37416499999995
node 7 x,y = 573.98863700000004 654.10377600000004
node 8 x,y = 571.24834599999997 647.16223200000002
node 9 x,y = 569.64021400000001 651.76819799999998
negative 2D Jacobian, element saved in DX_first_element_with_negative_jacobian.dx
Error detected, aborting MPI... proc
-------------- next part --------------
Reading the parameter file ...
Title of the simulation
3UF Three Uniform layers
1 1 2000.d0 1000.d0 500.0d0 0 0 10.d0 10.d0 0 0 0 0 0 0
2 1 2000.d0 1600.d0 800.0d0 0 0 10.d0 10.d0 0 0 0 0 0 0
3 1 2000.d0 3000.d0 1500.0d0 0 0 10.d0 10.d0 0 0 0 0 0 0
Nb of solid, fluid or porous materials = 3
Material # 1 isotropic
rho,cp,cs = 2000.0000000000000 1000.0000000000000 500.00000000000000 10.000000000000000 10.000000000000000
Material is solid
Material # 2 isotropic
rho,cp,cs = 2000.0000000000000 1600.0000000000000 800.00000000000000 10.000000000000000 10.000000000000000
Material is solid
Material # 3 isotropic
rho,cp,cs = 2000.0000000000000 3000.0000000000000 1500.0000000000000 10.000000000000000 10.000000000000000
Material is solid
Parameter file successfully read...
Source 1
Position xs, zs = 500.00000000000000 200.00000000000000
Frequency, delay = 6000.0000000000000 0.0000000000000000
Source type (1=force, 2=explosion): 1
Time function type (1=Ricker, 2=First derivative, 3=Gaussian, 4=Dirac, 5=Heaviside): 1
Angle of the source if force = 0.0000000000000000
Mxx of the source if moment tensor = 1.0000000000000000
Mzz of the source if moment tensor = 1.0000000000000000
Mxz of the source if moment tensor = 0.0000000000000000
Multiplying factor = 10000000000.000000
The mesh contains 12462 elements
Control elements have 9 nodes
Min and max value of X in the grid = 0.0000000000000000 1000.0000000000000
Min and max value of Z in the grid = 0.0000000000000000 1000.0000000000000
nedges_coupled (acoustic/poroelastic) 0
nedges_coupled (poroelastic/elastic) 0
Position (x,z) of the source = 500.00000000000000 200.00000000000000
writing the DATA/STATIONS_target file
There are 10 receivers
Target positions (x,z) of the 10 receivers
Receiver 1 = 0.0000000000000000 1000.0000000000000
Receiver 2 = 111.11111111111111 1000.0000000000000
Receiver 3 = 222.22222222222223 1000.0000000000000
Receiver 4 = 333.33333333333331 1000.0000000000000
Receiver 5 = 444.44444444444446 1000.0000000000000
Receiver 6 = 555.55555555555554 1000.0000000000000
Receiver 7 = 666.66666666666663 1000.0000000000000
Receiver 8 = 777.77777777777783 1000.0000000000000
Receiver 9 = 888.88888888888891 1000.0000000000000
Receiver 10 = 1000.0000000000000 1000.0000000000000
This will be a serial simulation
-------------- next part --------------
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