From lukas.drinkt.thee at gmail.com Tue Sep 5 02:45:21 2017 From: lukas.drinkt.thee at gmail.com (Lukas van de Wiel) Date: Tue, 5 Sep 2017 11:45:21 +0200 Subject: [CIG-SEISMO] bugfix, by mail after three failed pull request attempts Message-ID: Dear Specfem development when trying to run Specfem3D globe on GPU, I first had to fix a bug that prevented device names longer than 12 characters. Helpful as I am, I tried to make a pull request containing the fix. Three times I tried and failed to get it past your build bot. The first time it was obvious what I did wrong. The second and third time I have no idea. Could you tell me what I did wrong? It is probably in your git log. Here is a git screenshot, so that you can add the fix manually: https://i.imgur.com/i9M1wBZ.jpg Cheers Lukas From komatitsch at lma.cnrs-mrs.fr Tue Sep 5 14:21:09 2017 From: komatitsch at lma.cnrs-mrs.fr (Dimitri Komatitsch) Date: Tue, 5 Sep 2017 23:21:09 +0200 Subject: [CIG-SEISMO] bugfix, by mail after three failed pull request attempts In-Reply-To: References: Message-ID: <1753e5ef-f8fa-75d3-8cb8-5038b32717a3@lma.cnrs-mrs.fr> Hi Lukas, Thanks! I have done it. Cheers, Dimitri. On 09/05/2017 11:45 AM, Lukas van de Wiel wrote: > Dear Specfem development > > when trying to run Specfem3D globe on GPU, I first had to fix a bug > that prevented device names longer than 12 characters. > > Helpful as I am, I tried to make a pull request containing the fix. > Three times I tried and failed to get it past your build bot. The > first time it was obvious what I did wrong. The second and third time > I have no idea. > > Could you tell me what I did wrong? It is probably in your git log. > > Here is a git screenshot, so that you can add the fix manually: > https://i.imgur.com/i9M1wBZ.jpg > > Cheers > > Lukas > _______________________________________________ > CIG-SEISMO mailing list > CIG-SEISMO at geodynamics.org > http://lists.geodynamics.org/cgi-bin/mailman/listinfo/cig-seismo > -- Dimitri Komatitsch, CNRS Research Director (DR CNRS) Laboratory of Mechanics and Acoustics, Marseille, France http://komatitsch.free.fr From lukas.drinkt.thee at gmail.com Tue Sep 5 14:44:25 2017 From: lukas.drinkt.thee at gmail.com (Lukas van de Wiel) Date: Tue, 5 Sep 2017 23:44:25 +0200 Subject: [CIG-SEISMO] bugfix, by mail after three failed pull request attempts In-Reply-To: <1753e5ef-f8fa-75d3-8cb8-5038b32717a3@lma.cnrs-mrs.fr> References: <1753e5ef-f8fa-75d3-8cb8-5038b32717a3@lma.cnrs-mrs.fr> Message-ID: Hi Dimitri, thou art a gentleman and a scholar! :-) Lukas On Tue, Sep 5, 2017 at 11:21 PM, Dimitri Komatitsch < komatitsch at lma.cnrs-mrs.fr> wrote: > > Hi Lukas, > > Thanks! I have done it. > > Cheers, > Dimitri. > > > On 09/05/2017 11:45 AM, Lukas van de Wiel wrote: > >> Dear Specfem development >> >> when trying to run Specfem3D globe on GPU, I first had to fix a bug >> that prevented device names longer than 12 characters. >> >> Helpful as I am, I tried to make a pull request containing the fix. >> Three times I tried and failed to get it past your build bot. The >> first time it was obvious what I did wrong. The second and third time >> I have no idea. >> >> Could you tell me what I did wrong? It is probably in your git log. >> >> Here is a git screenshot, so that you can add the fix manually: >> https://i.imgur.com/i9M1wBZ.jpg >> >> Cheers >> >> Lukas >> _______________________________________________ >> CIG-SEISMO mailing list >> CIG-SEISMO at geodynamics.org >> http://lists.geodynamics.org/cgi-bin/mailman/listinfo/cig-seismo >> >> > -- > Dimitri Komatitsch, CNRS Research Director (DR CNRS) > Laboratory of Mechanics and Acoustics, Marseille, France > http://komatitsch.free.fr > -------------- next part -------------- An HTML attachment was scrubbed... URL: From zongboxu at u.boisestate.edu Wed Sep 13 09:49:40 2017 From: zongboxu at u.boisestate.edu (Zongbo Xu) Date: Wed, 13 Sep 2017 10:49:40 -0600 Subject: [CIG-SEISMO] A question about CUBIT_GEOCUBIT examples Message-ID: Hi Sir/Madam I am a student in Boise State University and plan to use the SPECFEM3D Cartesian. Now I plan to test CUBIT examples with Trelis/CUBIT. In make_mesh script files of CUBIT_GEOCUBIT examples, if I use 'GEOCUBIT.py --collect --meshfiles=output/mesh_vol_0.e --export2SPECFEM3D --SEMoutput=MESH', some error will happen;but if I delete the '--collect', the make_mesh script can work. Thus I was wondering if you have seen such situation before and the function of '--collect'. Thank you. Best wishes, Zongbo -------------- next part -------------- An HTML attachment was scrubbed... URL: From emanuele.casarotti at gmail.com Wed Sep 13 11:32:27 2017 From: emanuele.casarotti at gmail.com (emanuele casarotti) Date: Wed, 13 Sep 2017 18:32:27 +0000 Subject: [CIG-SEISMO] A question about CUBIT_GEOCUBIT examples In-Reply-To: References: Message-ID: Can you share the log file of your steps? It would be useful to understand the situation. Il giorno mer 13 set 2017 alle 20:24 Zongbo Xu ha scritto: > Hi Sir/Madam > > I am a student in Boise State University and plan to use the SPECFEM3D > Cartesian. Now I plan to test CUBIT examples with Trelis/CUBIT. In > make_mesh script files of CUBIT_GEOCUBIT examples, if I use 'GEOCUBIT.py > --collect --meshfiles=output/mesh_vol_0.e --export2SPECFEM3D > --SEMoutput=MESH', > some error will happen;but if I delete the '--collect', the make_mesh > script can work. Thus I was wondering if you have seen such situation > before and the function of '--collect'. > > Thank you. > > Best wishes, > > Zongbo > _______________________________________________ > CIG-SEISMO mailing list > CIG-SEISMO at geodynamics.org > http://lists.geodynamics.org/cgi-bin/mailman/listinfo/cig-seismo -------------- next part -------------- An HTML attachment was scrubbed... URL: From emanuele.casarotti at gmail.com Wed Sep 13 11:33:29 2017 From: emanuele.casarotti at gmail.com (emanuele casarotti) Date: Wed, 13 Sep 2017 18:33:29 +0000 Subject: [CIG-SEISMO] A question about CUBIT_GEOCUBIT examples In-Reply-To: References: Message-ID: Sorry for the short answer ... I'm reply from mobile phone Il giorno mer 13 set 2017 alle 20:32 emanuele casarotti < emanuele.casarotti at gmail.com> ha scritto: > Can you share the log file of your steps? It would be useful to understand > the situation. > Il giorno mer 13 set 2017 alle 20:24 Zongbo Xu > ha scritto: > >> Hi Sir/Madam >> >> I am a student in Boise State University and plan to use the SPECFEM3D >> Cartesian. Now I plan to test CUBIT examples with Trelis/CUBIT. In >> make_mesh script files of CUBIT_GEOCUBIT examples, if I use 'GEOCUBIT.py >> --collect --meshfiles=output/mesh_vol_0.e --export2SPECFEM3D >> --SEMoutput=MESH', >> some error will happen;but if I delete the '--collect', the make_mesh >> script can work. Thus I was wondering if you have seen such situation >> before and the function of '--collect'. >> >> Thank you. >> >> Best wishes, >> >> Zongbo >> _______________________________________________ >> CIG-SEISMO mailing list >> CIG-SEISMO at geodynamics.org >> http://lists.geodynamics.org/cgi-bin/mailman/listinfo/cig-seismo > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From zongboxu at u.boisestate.edu Thu Sep 14 12:43:18 2017 From: zongboxu at u.boisestate.edu (Zongbo Xu) Date: Thu, 14 Sep 2017 13:43:18 -0600 Subject: [CIG-SEISMO] A question about default-example in SPECFEM3D Cartesian Message-ID: Hi Sir/Madam In running the homogeneous_halfspace example, an error always happens, "No match in parameter file for keyword 'EXTERNAL_SOURCE_FILE'". I guess the error is due to the source part in the Par_file. However, I do not know how to fix it. Thus I was wondering if you have seen this before and tell me the solution. Thank you. Best wishes, Zongbo -------------- next part -------------- An HTML attachment was scrubbed... URL: From komatitsch at lma.cnrs-mrs.fr Thu Sep 14 13:17:57 2017 From: komatitsch at lma.cnrs-mrs.fr (Dimitri Komatitsch) Date: Thu, 14 Sep 2017 22:17:57 +0200 Subject: [CIG-SEISMO] A question about default-example in SPECFEM3D Cartesian In-Reply-To: References: Message-ID: Hi Zongbo, Thank you for your message. Please switch to the "devel" branch of the code by typing this: git checkout devel and you will be all set. I will merge that in the "master" branch in a couple of minutes (it seems our master branch is out of sync; I will fix it). Thank you, Best regards, Dimitri. On 09/14/2017 09:43 PM, Zongbo Xu wrote: > Hi Sir/Madam > > In running the homogeneous_halfspace example, an error always happens, > "No match in parameter file for keyword 'EXTERNAL_SOURCE_FILE'". I guess > the error is due to the source part in the Par_file. However, I do not > know how to fix it. Thus I was wondering if you have seen this before > and tell me the solution. Thank you. > > Best wishes, > > Zongbo > > > _______________________________________________ > CIG-SEISMO mailing list > CIG-SEISMO at geodynamics.org > http://lists.geodynamics.org/cgi-bin/mailman/listinfo/cig-seismo > -- Dimitri Komatitsch, CNRS Research Director (DR CNRS) Laboratory of Mechanics and Acoustics, Marseille, France http://komatitsch.free.fr From INCHINP at my.erau.edu Wed Sep 27 11:27:37 2017 From: INCHINP at my.erau.edu (Inchin, Pavel) Date: Wed, 27 Sep 2017 18:27:37 +0000 Subject: [CIG-SEISMO] MINEOS Installation problems Message-ID: Good day! I have a problem with the installation of mineos software package on MacOS Sierra Ver. 10.12. The configuration seems good, but when I try to do "make", it gives me an error. The report is presented below: Hydroxyl:mineos-1.0.2 paul_inchin$ ls AUTHORS NEWS config.status fftsubs.f syndat.f COPYING README configure green.f syndat.o ChangeLog aclocal.m4 configure.ac green.h time DEMO autom4te.cache doc minos_bran utils INSTALL aux-config eigcon.f minos_bran.f Makefile config.h fdb minos_bran.o Makefile.am config.h.in fdb_eigen.o scripts Makefile.in config.log fdbs.o stamp-h1 Hydroxyl:mineos-1.0.2 paul_inchin$ ./configure --prefix=$HOME/cig checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... ./aux-config/install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... gfortran checking whether the Fortran 77 compiler works... yes checking for Fortran 77 compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin16/6.3.0 -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin16/6.3.0/../../.. -lgfortran -lquadmath -lm checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: config.h is unchanged config.status: executing depfiles commands Hydroxyl:mineos-1.0.2 paul_inchin$ make /Applications/Xcode.app/Contents/Developer/usr/bin/make all-am gcc -DHAVE_CONFIG_H -I. -g -O2 -MT swapn.o -MD -MP -MF .deps/swapn.Tpo -c -o swapn.o `test -f 'fdb/swapn.c' || echo './'`fdb/swapn.c fdb/swapn.c:32:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] F77_FUNC(swap,SWAP)(c, b, N, n) ^ ./config.h:10:29: note: expanded from macro 'F77_FUNC' #define F77_FUNC(name,NAME) name ## _ ^ :220:1: note: expanded from here swap_ ^ fdb/swapn.c:43:3: error: non-void function 'swap_' should return a value [-Wreturn-type] return; ^ fdb/swapn.c:53:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int] F77_FUNC(swap1,SWAP1)(b, N, n) ^ ./config.h:10:29: note: expanded from macro 'F77_FUNC' #define F77_FUNC(name,NAME) name ## _ ^ :220:1: note: expanded from here swap1_ ^ fdb/swapn.c:62:3: error: non-void function 'swap1_' should return a value [-Wreturn-type] return; ^ 2 warnings and 2 errors generated. Thank you very much for your help! Best regards, Paul Inchin Mob : 386-679-7141 Email: inchinp at my.erau.edu, paul.inchin at yahoo.com, -------------- next part -------------- An HTML attachment was scrubbed... URL: