[CIG-SHORT] benchmark run not writing out result files
Brad Aagaard
baagaard at usgs.gov
Thu Dec 17 17:12:51 PST 2009
Isabelle-
This was my fault. In doing some performance testing a while ago I had
set the parameters to eliminate the output. In the
strikeslip_hex8_1000m.cfg file, you will see lines that set the info and
data fields to empty arrays. Those should be deleted. I have removed
these and committed the changes to the repository.
The 250m benchmark requires a lot of memory, so you may not be able to
run it unless your machine has more than ~12 GB RAM and you have a
64-bit version of PyLith.
Brad
Isabelle Ryder wrote:
> Hi Pylith people
>
> I have been running benchmarks for Pylith and for the most part the
> strike-slip and Savage & Prescott runs seem to be ok, with two exceptions:
>
> 1. There is insufficient memory to run the 250 m resolution grids, but
> from reading the Archives (October 2008) I am concluding that this is a
> 32 v. 64 bit issue (I am running Snow Leopard).
>
> 2. The strike-slip case with 1000 m resolution and hexahedral cells
> (LaGriT mesh) runs to completion and writes out material/fault info vtk
> files, but does not write out any result files (i.e. .....t0000.vtk).
> The 500 m resolution case writes out all these files just fine.
>
> For problem 2, there is some difference in the on-screen output for
> Event Stage 8 between the 500 and 1000 m cases, which I thought might be
> relevant. In particular there are many more zeroes/v. small numbers in
> the performance profile for the 1000 m case. The outputs are as follows:
>
> 500 m
> --------
> --- Event Stage 8: Poststep
>
> TSIm poststep 1 1.0 3.6871e+01 1.0 6.37e+08 1.0 0.0e+00 0.0e+00
> 9.0e+00 15 3 0 0 6 100100 0 0100 17
> ElIm poststep 1 1.0 1.2105e+01 1.0 3.22e+08 1.0 0.0e+00 0.0e+00
> 4.0e+00 5 1 0 0 3 33 51 0 0 44 27
> OutM writeData 1 1.0 9.9476e+00 1.0 1.71e+08 1.0 0.0e+00 0.0e+00
> 4.0e+00 4 1 0 0 3 27 27 0 0 44 17
> ElIm poststep 1 1.0 1.2058e+01 1.0 3.15e+08 1.0 0.0e+00 0.0e+00
> 2.0e+00 5 1 0 0 1 33 49 0 0 22 26
> OutM writeData 1 1.0 1.2053e+01 1.0 3.15e+08 1.0 0.0e+00 0.0e+00
> 2.0e+00 5 1 0 0 1 33 49 0 0 22 26
> OutM writeData 1 1.0 1.3060e-01 1.0 4.36e+03 1.0 0.0e+00 0.0e+00
> 2.0e+00 0 0 0 0 1 0 0 0 0 22 0
> CoKi poststep 1 1.0 2.7307e-01 1.0 4.36e+03 1.0 0.0e+00 0.0e+00
> 2.0e+00 0 0 0 0 1 1 0 0 0 22 0
> OutM writeData 1 1.0 1.2430e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00
> 1.0e+00 5 0 0 0 1 34 0 0 0 11 0
>
> 1000 m
> ---------
> --- Event Stage 8: Poststep
>
> TSIm poststep 1 1.0 2.8747e-01 1.0 1.89e+07 1.0 0.0e+00 0.0e+00
> 0.0e+00 1 1 0 0 0 95100 0 0 0 66
> ElIm poststep 1 1.0 2.7074e-01 1.0 1.89e+07 1.0 0.0e+00 0.0e+00
> 0.0e+00 1 1 0 0 0 90100 0 0 0 70
> OutM writeData 1 1.0 4.4107e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00
> 0.0e+00 0 0 0 0 0 0 0 0 0 0 0
> ElIm poststep 1 1.0 4.9951e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00
> 0.0e+00 0 0 0 0 0 2 0 0 0 0 0
> OutM writeData 1 1.0 3.6001e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00
> 0.0e+00 0 0 0 0 0 0 0 0 0 0 0
> OutM writeData 1 1.0 5.5075e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00
> 0.0e+00 0 0 0 0 0 0 0 0 0 0 0
> CoKi poststep 1 1.0 7.6108e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00
> 0.0e+00 0 0 0 0 0 3 0 0 0 0 0
> OutM writeData 1 1.0 6.5088e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00
> 0.0e+00 0 0 0 0 0 0 0 0 0 0 0
>
> --
> Dr Isabelle Ryder
> Lecturer in Geophysics
> Dept of Earth & Ocean Sciences
> University of Liverpool
> L69 3GP
> tel: 0151 7945143
>
>
> ------------------------------------------------------------------------
>
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